Genetic composition and diversity of Arabica coffee in the crop's centre of origin and its impact on four major fungal diseases.

Conventional wisdom states that genetic variation reduces disease levels in plant populations. Nevertheless, crop species have been subject to a gradual loss of genetic variation through selection for specific traits during breeding, thereby increasing their vulnerability to biotic stresses such as pathogens. We explored how genetic variation in Arabica coffee sites in southwestern Ethiopia was related to the incidence of four major fungal diseases. Sixty sites were selected along a gradient of management intensity, ranging from nearly wild to intensively managed coffee stands. We used genotyping-by-sequencing of pooled leaf samples (pool-GBS) derived from 16 individual coffee shrubs in each of the 60 sites to assess the variation in genetic composition (multivariate: reference allele frequency) and genetic diversity (univariate: mean expected heterozygosity) between sites. We found that genetic composition had a clear spatial pattern and that genetic diversity was higher in less managed sites. The incidence of the four fungal diseases was related to the genetic composition of the coffee stands, but in a specific way for each disease. In contrast, genetic diversity was only related to the within-site variation of coffee berry disease, but not to the mean incidence of any of the four diseases across sites. Given that fungal diseases are major challenges of Arabica coffee in its native range, our findings that genetic composition of coffee sites impacted the major fungal diseases may serve as baseline information to study the molecular basis of disease resistance in coffee. Overall, our study illustrates the need to consider both host genetic composition and genetic diversity when investigating the genetic basis for variation in disease levels.

Disturbance from traditional fire management in subalpine heathlands increases Afro-alpine plant resilience to climate change.

Species are often controlled by biotic factors such as competition at the warm edge of their distribution range. Disturbances at the treeline, disrupting competitive dominance, may thus enable alpine species to utilize lower altitudes. We searched for evidence for range expansion in grazed, fire-managed Ethiopian subalpine Erica heathlands across a 25-year chronosequence. We examined vascular plant composition in 48 plots (5 × 5 m) across an altitudinal range of 3,465-3,711 m.a.s.l. and analyzed how community composition changed in relation to increasing competition over time (using a Shade index based on Erica shrub height and cover) and altitude. Species' habitats and altitudinal ranges were derived from literature. Time since fire explained more variation (r2  = .41) in species composition than altitude did (r2  = .32) in an NMDS analysis. Community-weighted altitudinal optima for species in a plot decreased strongly with increasing shade (GLM, Standardized Regression Coefficient SRC = -.41, p = .003), but increased only weakly with altitude (SRC = .26, p = .054). In other words, young stands were dominated by species with higher altitudinal optima than old stands. Forest species richness increased with Log Shade index (SRC = .12, p = .008), but was unaffected by altitude (SRC = -.07, p = .13). However, richness of alpine and heathland species was not highest in plots with lowest Shade index, but displayed a unimodal pattern with an initial increase, followed by a decrease when shading increased (altitude was not significant). Our results indicate that disturbance from the traditional patch burning increases the available habitat for less competitive high-altitude plants and prevents tree line ascent. Therefore, maintaining, but regulating, the traditional land use increases the Afro-alpine flora's resilience to global warming. However, this system is threatened by a new REDD+ program attempting to increase carbon storage via fire suppression. This study highlights the importance of understanding traditional management regimes for biodiversity conservation in cultural landscapes in an era of global change.

Sweet vernal grasses (Anthoxanthum) colonized African mountains along two fronts in the Late Pliocene, followed by secondary contact, polyploidization and local extinction in the Pleistocene.

High tropical mountains harbour remarkable and fragmented biodiversity thought to a large degree to have been shaped by multiple dispersals of cold-adapted lineages from remote areas. Few dated phylogenetic/phylogeographic analyses are however available. Here, we address the hypotheses that the sub-Saharan African sweet vernal grasses have a dual colonization history and that lineages of independent origins have established secondary contact. We carried out rangewide sampling across the eastern African high mountains, inferred dated phylogenies from nuclear ribosomal and plastid DNA using Bayesian methods, and performed flow cytometry and AFLP (amplified fragment length polymorphism) analyses. We inferred a single Late Pliocene western Eurasian origin of the eastern African taxa, whose high-ploid populations in one mountain group formed a distinct phylogeographic group and carried plastids that diverged from those of the currently allopatric southern African lineage in the Mid- to Late Pleistocene. We show that Anthoxanthum has an intriguing history in sub-Saharan Africa, including Late Pliocene colonization from southeast and north, followed by secondary contact, hybridization, allopolyploidization and local extinction during one of the last glacial cycles. Our results add to a growing body of evidence showing that isolated tropical high mountain habitats have a dynamic recent history involving niche conservatism and recruitment from remote sources, repeated dispersals, diversification, hybridization and local extinction.

A heterogeneous landscape does not guarantee high crop pollination.

The expansion of pollinator-dependent crops, especially in the developing world, together with reports of worldwide pollinator declines, raises concern of possible yield gaps. Farmers directly reliant on pollination services for food supply often live in regions where our knowledge of pollination services is poor. In a manipulative experiment replicated at 23 sites across an Ethiopian agricultural landscape, we found poor pollination services and severe pollen limitation in a common oil crop. With supplementary pollination, the yield increased on average by 91%. Despite the heterogeneous agricultural matrix, we found a low bee abundance, which may explain poor pollination services. The variation in pollen limitation was unrelated to surrounding forest cover, local bee richness and bee abundance. While practices that commonly increase pollinators (restricted pesticide use, flower strips) are an integral part of the landscape, these elements are apparently insufficient. Management to increase pollination services is therefore in need of urgent investigation.

Colonization and diversification in the African 'sky islands': insights from fossil-calibrated molecular dating of Lychnis (Caryophyllaceae).

The flora on the isolated high African mountains or 'sky islands' is remarkable for its peculiar adaptations, local endemism and striking biogeographical connections to remote parts of the world. Ages of the plant lineages and the timing of their radiations have frequently been debated but remain contentious as there are few estimates based on explicit models and fossil-calibrated molecular clocks. We used the plastid region maturaseK (matK) and a Caryophylloflora paleogenica fossil to infer the age of the genus Lychnis, and constructed a data set of three plastid (matK; a ribosomal protein S16 (rps16); and an intergenic spacer (psbE-petL)) and two nuclear (internal transcribed spacer (ITS) and a region spanning exon 18-24 in the second largest subunit of RNA polymerase II (RPB2)) loci for joint estimation of the species tree and divergence time of the African representatives. The time of divergence of the African high-altitude Lychnis was placed in the late Miocene to early Pliocene. A single speciation event was inferred in the early Pliocene; subsequent speciation took place sporadically from the late Pliocene to the middle Pleistocene. We provide further support for a Eurasian origin of the African 'sky islands' floral elements, which seem to have been recruited via dispersals at different times: some old, as in Lychnis, and others very recent. We show that dispersal and diversification within Africa play an important role in shaping these isolated plant communities.

Use of ancient sedimentary DNA as a novel conservation tool for high-altitude tropical biodiversity.

Conservation of biodiversity may in the future increasingly depend upon the availability of scientific information to set suitable restoration targets. In traditional paleoecology, sediment-based pollen provides a means to define preanthropogenic impact conditions, but problems in establishing the exact provenance and ecologically meaningful levels of taxonomic resolution of the evidence are limiting. We explored the extent to which the use of sedimentary ancient DNA (sedaDNA) may complement pollen data in reconstructing past alpine environments in the tropics. We constructed a record of afro-alpine plants retrieved from DNA preserved in sediment cores from 2 volcanic crater sites in the Albertine Rift, eastern Africa. The record extended well beyond the onset of substantial anthropogenic effects on tropical mountains. To ensure high-quality taxonomic inference from the sedaDNA sequences, we built an extensive DNA reference library covering the majority of the afro-alpine flora, by sequencing DNA from taxonomically verified specimens. Comparisons with pollen records from the same sediment cores showed that plant diversity recovered with sedaDNA improved vegetation reconstructions based on pollen records by revealing both additional taxa and providing increased taxonomic resolution. Furthermore, combining the 2 measures assisted in distinguishing vegetation change at different geographic scales; sedaDNA almost exclusively reflects local vegetation, whereas pollen can potentially originate from a wide area that in highlands in particular can span several ecozones. Our results suggest that sedaDNA may provide information on restoration targets and the nature and magnitude of human-induced environmental changes, including in high conservation priority, biodiversity hotspots, where understanding of preanthropogenic impact (or reference) conditions is highly limited.

Lessons from Ethiopian coffee landscapes for global conservation in a post-wild world.

The reality for conservation of biodiversity across our planet is that all ecosystems are modified by humans in some way or another. Thus, biodiversity conservation needs to be implemented in multifunctional landscapes. In this paper we use a fascinating coffee-dominated landscape in southwest Ethiopia as our lens to derive general lessons for biodiversity conservation in a post-wild world. Considering a hierarchy of scales from genes to multi-species interactions and social-ecological system contexts, we focus on (i) threats to the genetic diversity of crop wild relatives, (ii) the mechanisms behind trade-offs between biodiversity and agricultural yields, (iii) underexplored species interactions suppressing pest and disease levels, (iv) how the interactions of climate change and land-use change sometimes provide opportunities for restoration, and finally, (v) how to work closely with stakeholders to identify scenarios for sustainable development. The story on how the ecology and evolution of coffee within its indigenous distribution shape biodiversity conservation from genes to social-ecological systems can inspire us to view other landscapes with fresh eyes. The ubiquitous presence of human-nature interactions demands proactive, creative solutions to foster biodiversity conservation not only in remote protected areas but across entire landscapes inhabited by people.

Effects of coffee management on deforestation rates and forest integrity.

Knowledge about how forest margins are utilized can be crucial for a general understanding of changes in forest cover, forest structure, and biodiversity across landscapes. We studied forest-agriculture transitions in southwestern Ethiopia and hypothesized that the presence of coffee (Coffea arabica)decreases deforestation rates because of coffee's importance to local economies and its widespread occurrence in forests and forest margins. Using satellite images and elevation data, we compared changes in forest cover over 37 years (1973-2010) across elevations in 2 forest-agriculture mosaic landscapes (1100 km(2) around Bonga and 3000 km(2) in Goma-Gera). In the field in the Bonga area, we determined coffee cover and forest structure in 40 forest margins that differed in time since deforestation. Both the absolute and relative deforestation rates were lower at coffee-growing elevations compared with at higher elevations (-10/20% vs. -40/50% comparing relative rates at 1800 m asl and 2300-2500 m asl, respectively). Within the coffee-growing elevation, the proportion of sites with high coffee cover (>20%) was significantly higher in stable margins (42% of sites that had been in the same location for the entire period) than in recently changed margins (0% of sites where expansion of annual crops had changed the margin). Disturbance level and forest structure did not differ between sites with 30% or 3% coffee. However, a growing body of literature on gradients of coffee management in Ethiopia reports coffee's negative effects on abundances of forest-specialist species. Even if the presence of coffee slows down the conversion of forest to annual-crop agriculture, there is a risk that an intensification of coffee management will still threaten forest biodiversity, including the genetic diversity of wild coffee. Conservation policy for Ethiopian forests thus needs to develop strategies that acknowledge that forests without coffee production may have higher deforestation risks than forests with coffee production and that forests with coffee production often have lower biodiversity value.

Corrigendum to "The current land use dynamics are dependent on the previous land conversion legacies in farming system of west Oromia, Ethiopia" [Heliyon 8 (12) (December 2022) e12504].

[This corrects the article DOI: 10.1016/j.heliyon.2022.e12504.].

Ethnobotanical study of underutilized wild edible plants and threats to their long-term existence in Midakegn District, West Shewa Zone, Central Ethiopia.

BACKGROUND: Ethiopia is endowed with much plant diversity. The insignificant number of studies on wild edible plants with their ethnobotanical perspectives indicated that this plant diversity comprised only hundreds of wild edible plants used to supplement food sources for the local community under different conditions. There still need to be further investigations throughout the country when compared to the total area and cultural diversity of the country. However, they are seriously under pressure due to different natural and human influences. Therefore, the study was conducted to document underutilized wild edible plants along with their associated indigenous knowledge and explore threats to them in Midakegn District. METHODS: A questionnaire survey, semi-structured interviews, a market survey, score ranking, and focused group discussions were employed for data collection. Statistical analysis of ethnobotanical knowledge mean variation between different informant groups was computed by using one-way ANOVA in the IBM SPSS Statics version 24 package. RESULTS: A total of fifty underutilized wild edible plants belonging to 39 genera and 30 families were collected, recorded, and documented. The families Moraceae (four), Fabaceae, Flacourtaceae, Myrtaceae, Rosaceae, and Tiliaceae (each three) represented the highest number of species. It comprised shrubs (44%), trees (36%), herbs (18%), and epiphytes (2%). Fruits (62.3%) were found to be the most frequently used and mostly taken raw, fresh, or dried. These edible resources were consumed to supplement staple foods (67.3%), whereas 25% were used as emergency foods. The majority of species (96%) had multiple uses in addition to their edibility. A significantly higher (P < 0.05) number of underutilized wild edible plants were cited by males than females, by key informants than generals, elders than youngsters, illiterate than literate, and poorer than other wealth class groups of the community. Priority rankings indicate that agricultural expansion, fuel wood harvest, overgrazing, and selective harvesting are the most threatening factors to underutilized wild edible plants. CONCLUSIONS: Fifty underutilized wild edible plants, along with their associated indigenous knowledge, were recorded. Local people utilize them for supplementing staple food, as emergency food, to get relief, trust, and chew during drought. But they are mainly threatened by different human activities in the study area.

Modelling the current and future distribution potential areas of Peperomia abyssinica Miq., and Helichrysum citrispinum Steud. ex A. Rich. in Ethiopia.

BACKGROUND: The aim of this study is to investigate how climate change influences the distribution of economically and environmentally important species of P. abyssinica and H. citrispinum in Ethiopia. The species distribution modeling intends to forecast species' ecological niche ranges and habitat suitability by employing a variety of environmental parameters as predictors, which is vital for conservation planning and restoration success. Six representative concentration pathways (RCP 2.6, 4.5, and 8.5 for the years 2050 and 2070) with the same resolution of 2.5 min that shows the emission scenarios were used for the prediction. To predict the current and future distributions of H. citrispinum and P. abyssinica 56 and 45 occurrence records from National Herbarium, Addis Ababa University, GBIF, and available literatures were used respectively. RESULTS: The MaxEnt model predicted habitat suitability for H. citrispinum species with an Area Under Curve (AUC) value of 0.961 ± 0.027, and 0.809 ± 0.045 for P. abyssinica, indicating excellent discriminatory ability or accuracy under the current climate scenario. The Future distribution of suitable habitat for both H. citrispinum and P. abyssinica plant species was accurately predicted with AUC values of 0.960 ± 0.017 and 0.780 ± 0.35, respectively under future climatic scenarios. The jackknife test result indicates that environmental variables such as topographic position index (92.5%), precipitation of the driest quarter (3%) and precipitation in the coldest quarter (1.8%) are associated with the distributions of H. citrispinum, while topographic position index (36.6%), precipitation of driest quarter (21.4%), precipitation of warmest quarter (16.2%) and precipitation seasonality (13.9%) were found to be limiting environmental variables for P. abyssinica under current and future climatic conditions in Ethiopia. The prediction map and interception calculation for both present and projected (in the 2050s and again in the 2070s) climate change scenarios indicate significant habitat loss, decreased, and fragmentation under all RCPs (2.6, 4.5, and 8.5) scenarios for P. abyssinica while habitat gain, and increasing for H. citrispinum in Ethiopia. CONCLUSIONS: Topographic position index (TPI) is the most impactful predictor variable on the distribution of the two species. Consequently, potentially habitable areas (with diverse aspects and slopes) are increasing for H. citrispinum while decreasing for P. abyssinica.

Quantifying shrub encroachment through soil seed bank analysis in the Ethiopian highlands.

This study aimed to understand the impact of shrub encroachment on native species in the Guassa Community Conservation Area in Ethiopia. We assessed the soil seed bank composition and density across different elevations and aspects, and management systems within the area. The vegetation was stratified and eight blocks were selected across a range of elevation (<3350 m and >3350 m) and aspect (northeast, northwest, southeast, southwest). Within each block we established twenty 5m x 5m plots for a total of 160. We then collected soil samples from five subplots (1 m x 1 m) at three depths (0-3 cm, 3-6 cm and 6-9 cm) for a total of 480 samples, which were established in pots in greenhouse. We calculated species abundance by totaling the number of seedlings that emerged from each sample. To determine the variability in the abundance of Festuca macrophylla and Helichrysum splendidum in the soil seed bank along altitudinal gradient, we used two-way ANOVA using SAS statistical software version 9.0.1. Shannon diversity index was used to determine species diversity in the soil seedbank. After counting all the seeds, we identified 74 plant species represented in the soil seedbank which belong to 55 genera and 23 families. Eleven species are endemic to Ethiopia. At the lower elevation range, the effects of aspect (P <0.0088) and soil depth (P <0.005) are not significant to determine the abundance of seeds of H. splendidum and F. macrophylla. But when the factors are segregated, both aspect and soil depth play a significant role (p<0.0001) regarding the abundance of the seeds of the competing species at lower elevation. At higher elevation, only the effect of soil depth is significant (P<0.0001) for determining the abundance of H. splendidum. Soil depth and aspect have no significant effects on soil seed bank abundance at this elevation.

Conservation implications of mapping the potential distribution of an Ethiopian endemic versatile medicinal plant, Echinops kebericho Mesfin.

Echinops kebericho is a narrow-range multipurpose medicinal plant confined to Ethiopia. Intense land use change and overharvesting for traditional medicine have resulted in narrow distributions of its populations. It is a threatened species with a decreasing population trend. This study aims to map its potential distribution, which is key to guide conservation efforts and sustainable use. We modeled the potential distribution of E. kebercho using the maximum entropy model (MaxEnt) employing 11 less correlated predictor variables by calibrating the model at two complexity levels and replicating each model 10 times using a cross validation technique. We projected the models into the whole of Ethiopia and produced binary presence-absence maps by classifying the average map from both complexity levels applying three threshold criteria and ensembling the resulting maps into one for the final result. We mapped suitable habitat predicted with high certainty and identified local districts where E. kebericho can be cultivated or introduced to enhance its conservation. We estimated that E.kebercho has about 137,925 km2 of suitable habitat, mainly concentrated in the western highlands of the Ethiopian mountains. Our models at both complexity levels had high average performances, AUC values of 0.925 for the complex model and 0.907 for the simpler model. The variations in performance among the 10 model replicates were not remarkable, an AUC standard deviation of 0.040 for complex and 0.046 for simple model. Although E. kebericho is locally confined, our models predicted that it has a remarkably wider potential distribution area. We recommend introducing E. kebericho to these areas to improve its conservation status and tap its multiple benefits on a sustainable basis. Locally confined threatened plants and animals likely have wider potential distributions than their actual distributions and thus similar methodology can be applied for their conservation.

Ethnobotany of traditional medicinal plants and associated indigenous knowledge in Dawuro Zone of Southwestern Ethiopia.

BACKGROUND: The study aimed at documenting the indigenous and local knowledge and use of traditional medicinal plants for treating human and livestock ailments in Dawuro Zone of Ethiopia. METHODS: A survey was conducted among traditional healers and native administrators through discussion, interviews, and field observations. The snowball sampling technique was used to select 384 traditional healers in purposefully selected 50 villages spanning seven districts for face-to-face individual interviews. The chi-square test was applied to establish associations between traditional healers' demographics, the distance between the village site and the nearest natural forest and a health center, and SPSS V.20 software was used for the analysis. RESULTS: The traditional healers of the study area reported the use of 274 traditional medicinal plant species belonging to 217 genera and 82 families. Asteraceae (11.68%), Fabaceae (9.49%), and Lamiaceae (9.12%) were the foremost frequently used families. Herb species (54.8%) and leaves (65%) were predominantly sourced from the wild environment. The quantity of medicinal plants used (x2 = 278.368, df = 20, P = 0.000) and years of (experience in) traditional healing using herbs (x2 = 76.358, df = 10, P = 0.000) varied with distance from the natural forests. The service charge for healing had strong positive association (x2 = 24.349, df = 5, P = 0.000) with healer's age (x2 = 309.119, df = 184, P = 0.000) and educational level (x2 = 851.230, df = 598, P = 0.000) with distance of traditional healer's residence from the medical institution. The agricultural activities, urbanization, low or no charge for the healing service, the secrecy and oral transfer of the knowledge, and the demand for medicinal and other multiple purposes species were some of the factors threatening the resource and the associated knowledge as well as the service in the study area. CONCLUSION: There are diversified traditional medicinal plants applied for healthcare of the community and domestic animals of the study area. The source of remedies mostly depends on herbs of natural forests, and the leaf was the most frequently used plant part. Developing conservation intervention and sustainable systems of utilization is needed for multipurpose medicinal plants. Finally, integrating with modern system and formalizing, legalizing, and capacitating the traditional medicine practitioners are needed for access of primary healthcare systems to rural communities.

The current land use dynamics are dependent on the previous land conversion legacies in farming system of west oromia, Ethiopia.

The land use analyses most often focused on the spatio-temporal change detection and how the current conversion status is associated with the previous legacies of land use dynamics are little understood. Here, we examined how the forest land use has been converted to other land use types, and if the intermittent and the current extent of the dynamics are associated with the previous extent of land conversions along spatio-temporal scale. For this, we performed the land use change detection with respective to simplified, moderate and complex landscapes forest cover gradients. These analyses were carried out for the periods of forty-five years (1973-2018) by employing supervised classification method. Our results showed that the forestland has been converted to other land use types at the annual rates of -1.23, -1.34 and -0.81 in simplified, moderate and complex landscapes, respectively. Especially, the rate of forest conversion to crop land has been higher in simplified and moderate landscapes when compared with that of the complex landscapes. These results show that the current statuses of land conversions are largely dependent on the landscape complexity gradients occurred as the result of land use legacies (varying intensity of land management regime in the past). Altogether, a landscape complexity per se is not only a guarantee, and the previous land conversion legacies and the current land use dynamics as well need to be considered in developing landscape management strategies.

Ecosystem restoration in fire-managed savanna woodlands: Effects on biodiversity, local livelihoods and fire intensity.

Ethiopia aims to restore 15 million ha degraded forests and woodlands, but effects on the potentially contrasting goals of long-term carbon storage, biodiversity and sustainable livelihoods are unknown. To quantify the effects of grazing exclusion on vegetation and fire behaviour, we established six 30 × 30 m fenced exclosures with grazed controls, in a mesic wooded savanna. Experimental burns were done after 1.5 years. Tree seedlings were few but more common inside fences. Field layer cover and biomass increased inside fences, and grass species increased in numbers and cover. Fire intensity was higher inside fences, killing shrubs and saplings but not mature trees. Interviews confirmed that overgrazing has resulted in "cool fires", causing shrub encroachment. High-intensity fires occurred in the 1980s after a zoonotic disease killed most livestock. Short-term increase in carbon storage through fire and grazing exclusion may lead to loss of pasture, and in the long-term increased wildfire risk.

Multi-scale mosaics in top-down pest control by ants from natural coffee forests to plantations.

While top-down control plays an important role in shaping both natural and agricultural food webs, we lack insights into how top-down control effects vary across spatial scales. We used a multi-scale survey of top-down control of coffee pests and diseases by arboreal ants to examine if colony location creates a small-scale mosaic in top-down control around trees and if the strength of that control varies between sites at the landscape scale. We investigated pest and disease levels on coffee shrubs at different distances from shade trees with and without a Crematogaster spp. ant colony in 59 sites along a coffee management intensity gradient in southwestern Ethiopia. Within sites, ants significantly suppressed herbivory and coffee leaf rust at distances less than 10 m from nesting trees. Top-down control varied between sites, with stronger top-down control of free-feeding herbivory near ant colonies at sites with lower management intensity and stronger top-down control of a skeletonizer at sites with higher canopy cover. We conclude that the strength of top-down control by ants is highly heterogeneous across spatial scales, as a consequence of the biology of the predator at the small scale and herbivore density or changes in herbivore-ant interactions at the landscape scale.

Spatial and temporal 2H and 18O isotope variation of contemporary precipitation in the Bale Mountains, Ethiopia.

East Africa is an underrepresented region in respect of monitoring the stable isotopic composition of precipitation (δ18Oprec and δ2Hprec). In 2017, we collected precipitation samples from ten weather stations located along an altitudinal transect ranging from 1304 to 4375 m a.s.l. The δ18Oprec and δ2Hprec values varied from -8.7 to +3.7 ‰ and -38 to +29 ‰, respectively. The local meteoric water line is characterised by a lower slope, a higher intercept and more positive d-excess values (δ2H = 5.3 ± 0.2 * δ18O + 14.9 ± 0.9) compared to the global meteoric water line. Both altitude and amount of precipitation clearly correlate with our isotope data. However, the δ18Oprec and δ2Hprec values show at the same time a seasonal pattern reflecting rainy versus dry season. More enriched isotope values prevailed shortly after the end of the dry season; more depleted isotope values coincided with high precipitation amounts recorded in May, August and September. Moreover, HYSPLIT trajectories reveal that during the dry season water vapour originates primarily from the Arabian Sea, whereas during the wet season it originates primarily from the Southern Indian Ocean. These findings challenge the traditional amount effect interpretation of paleoclimate isotope records from East Africa and rather point to a previously underestimated source effect.

Afro-alpine flagships revisited: Parallel adaptation, intermountain admixture and shallow genetic structuring in the giant senecios (Dendrosenecio).

Distantly related lineages of the enigmatic giant rosette plants of tropical alpine environments provide classical examples of convergent adaptation. For the giant senecios (Dendrosenecio), the endemic landmarks of the East African sky islands, it has also been suggested that parallel adaptation has been important for within-lineage differentiation. To test this hypothesis and to address potential gene flow and hybridization among the isolated sky islands, we organized field expeditions to all major mountains. We sampled all currently accepted species and all but one subspecies and genotyped 460 plants representing 109 populations. We tested whether genetic structuring corresponds to geography, as predicted by a parallel adaptation hypothesis, or to altitudinal belt and habitat rather than mountains, as predicted by a hypothesis of a single origin of adaptations. Bayesian and Neighbor-Net analyses showed that the main genetic structure is shallow and largely corresponds to geography, supporting a hypothesis of recent, rapid radiation via parallel altitude/habitat adaptation on different mountains. We also found evidence for intermountain admixture, suggesting several long-distance dispersals by wind across vast areas of unsuitable habitat. The combination of parallel adaptation, secondary contact, and hybridization may explain the complex patterns of morphological variation and the contradicting taxonomic treatments of these rare enigmatic giants, supporting the use of wide taxonomic concepts. Notably, the within-population genetic diversity was very low and calls for increased conservation efforts.

Complementary roles of home gardens and exotic tree plantations as alternative habitats for plants of the Ethiopian montane rainforest.

Many tropical forests have been converted for agri- or silviculture or a combination of both (agroforestry). Conservation at a landscape scale requires an understanding of the distribution and abundance of native biodiversity in these converted natural ecosystems, of which the knowledge is especially poor for African agroecosystems. We compared species density and species composition of four plant groups (trees and shrubs, epiphytic vascular plants, mosses, and liverworts) among three arboreal land-use types in southwestern Ethiopia (montane rainforest fragments, shade-tree coffee home gardens, and exotic tree plantations). Species density was significantly higher in forests than in coffee home gardens for all plant groups and in exotic tree plantations for all groups except mosses. Home gardens had more vascular epiphytic species than plantations, whereas the reverse was true for mosses and liverworts. The species composition of the forest plots was sometimes more similar to home-garden plots than plantation plots and sometimes vice versa. Fifteen forest plots had, however, cumulatively more species than a random selection of 15 nonforest (coffee home garden and plantation) plots, even if the 2 plot types complemented each other in terms of habitats for forest plants. Tree plantations dominated by Eucalyptus had many small trees and shrubs in common with forests, whereas plantations with Cupressus were important substrates for forests mosses and liverworts. Our results illustrate the importance of undisturbed forests habitats for conservation of species at a landscape scale and that different human-made land-use types may complement each other in their capacity as additional habitats for forest species.