Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 38
Filtrar
1.
J Biol Chem ; 299(6): 104732, 2023 06.
Artículo en Inglés | MEDLINE | ID: mdl-37086785

RESUMEN

Nicotianamine synthase (NAS) catalyzes the biosynthesis of the low-molecular-mass metal chelator nicotianamine (NA) from the 2-aminobutyrate moieties of three SAM molecules. NA has central roles in metal nutrition and metal homeostasis of flowering plants. The enzymatic function of NAS remains poorly understood. Crystal structures are available for archaeal and bacterial NAS-like proteins that carry out simpler aminobutanoyl transferase reactions. Here, we report amino acids essential for the activity of AtNAS1 based on structural modeling and site-directed mutagenesis. Using a newly developed enzyme-coupled continuous activity assay, we compare differing NAS proteins identified through multiple sequence alignments and phylogenetic analyses. In most NAS of dicotyledonous and monocotyledonous plants (class Ia and Ib), the core-NAS domain is fused to a variable C-terminal domain. Compared to fungal and moss NAS that comprise merely a core-NAS domain (class III), NA biosynthetic activities of the four paralogous Arabidopsis thaliana NAS proteins were far lower. C-terminally trimmed core-AtNAS variants exhibited strongly elevated activities. Of 320 amino acids of AtNAS1, twelve, 287-TRGCMFMPCNCS-298, accounted for the autoinhibitory effect of the C terminus, of which approximately one-third was attributed to N296 within a CNCS motif that is fully conserved in Arabidopsis. No detectable NA biosynthesis was mediated by two representative plant NAS proteins that naturally lack the C-terminal domain, class Ia Arabidopsis halleri NAS5 and Medicago truncatula NAS2 of class II which is found in dicots and diverged early during the evolution of flowering plants. Next, we will address a possible posttranslational release of autoinhibition in class I NAS proteins.


Asunto(s)
Transferasas Alquil y Aril , Proteínas de Arabidopsis , Arabidopsis , Arabidopsis/enzimología , Arabidopsis/genética , Proteínas de Arabidopsis/química , Proteínas de Arabidopsis/genética , Filogenia , Transferasas Alquil y Aril/química , Transferasas Alquil y Aril/genética
2.
Plant J ; 109(4): 992-1013, 2022 02.
Artículo en Inglés | MEDLINE | ID: mdl-34839543

RESUMEN

IRON-REGULATED TRANSPORTER1 (IRT1) is the root high-affinity ferrous iron (Fe) uptake system and indispensable for the completion of the life cycle of Arabidopsis thaliana without vigorous Fe supplementation. Here we provide evidence supporting a second role of IRT1 in root-to-shoot partitioning of Fe. We show that irt1 mutants overaccumulate Fe in roots, most prominently in the cortex of the differentiation zone in irt1-2, compared to the wild type. Shoots of irt1-2 are severely Fe-deficient according to Fe content and marker transcripts, as expected. We generated irt1-2 lines producing IRT1 mutant variants carrying single amino-acid substitutions of key residues in transmembrane helices IV and V, Ser206 and His232, which are required for transport activity in yeast. Root short-term 55 Fe uptake rates were uninformative concerning IRT1-mediated transport. Overall irt1-like concentrations of the secondary substrate Mn suggested that the transgenic Arabidopsis lines also remain incapable of IRT1-mediated root Fe uptake. Yet, IRT1S206A partially complements rosette dwarfing and leaf chlorosis of irt1-2, as well as root-to-shoot Fe partitioning and gene expression defects of irt1-2, all of which are fully complemented by wild-type IRT1. Taken together, these results suggest a regulatory function for IRT1 in root-to-shoot Fe partitioning that does not require Fe transport activity of IRT1. Among the genes of which transcript levels are partially dependent on IRT1, we identify MYB DOMAIN PROTEIN10, MYB DOMAIN PROTEIN72 and NICOTIANAMINE SYNTHASE4 as candidates for effecting IRT1-dependent Fe mobilization in roots. Understanding the biological functions of IRT1 will help to improve Fe nutrition and the nutritional quality of agricultural crops.


Asunto(s)
Proteínas de Arabidopsis/metabolismo , Arabidopsis/metabolismo , Proteínas de Transporte de Catión/metabolismo , Compuestos Ferrosos/metabolismo , Proteínas Reguladoras del Hierro/metabolismo , Raíces de Plantas/metabolismo , Brotes de la Planta/metabolismo , Arabidopsis/genética , Proteínas de Arabidopsis/genética , Transporte Biológico , Proteínas de Transporte de Catión/genética , Diferenciación Celular , Regulación de la Expresión Génica de las Plantas , Homeostasis , Proteínas Reguladoras del Hierro/genética , Hojas de la Planta/metabolismo , Raíces de Plantas/citología , Brotes de la Planta/citología , Transcriptoma
3.
Plant J ; 106(6): 1523-1540, 2021 06.
Artículo en Inglés | MEDLINE | ID: mdl-33768644

RESUMEN

Temperature passively affects biological processes involved in plant growth. Therefore, it is challenging to study the dedicated temperature signalling pathways that orchestrate thermomorphogenesis, a suite of elongation growth-based adaptations that enhance leaf-cooling capacity. We screened a chemical library for compounds that restored hypocotyl elongation in the pif4-2-deficient mutant background at warm temperature conditions in Arabidopsis thaliana to identify modulators of thermomorphogenesis. The small aromatic compound 'Heatin', containing 1-iminomethyl-2-naphthol as a pharmacophore, was selected as an enhancer of elongation growth. We show that ARABIDOPSIS ALDEHYDE OXIDASES redundantly contribute to Heatin-mediated hypocotyl elongation. Following a chemical proteomics approach, the members of the NITRILASE1-subfamily of auxin biosynthesis enzymes were identified among the molecular targets of Heatin. Our data reveal that nitrilases are involved in promotion of hypocotyl elongation in response to high temperature and Heatin-mediated hypocotyl elongation requires the NITRILASE1-subfamily members, NIT1 and NIT2. Heatin inhibits NIT1-subfamily enzymatic activity in vitro and the application of Heatin accordingly results in the accumulation of NIT1-subfamily substrate indole-3-acetonitrile in vivo. However, levels of the NIT1-subfamily product, bioactive auxin (indole-3-acetic acid), were also significantly increased. It is likely that the stimulation of hypocotyl elongation by Heatin might be independent of its observed interaction with NITRILASE1-subfamily members. However, nitrilases may contribute to the Heatin response by stimulating indole-3-acetic acid biosynthesis in an indirect way. Heatin and its functional analogues present novel chemical entities for studying auxin biology.


Asunto(s)
Aminohidrolasas/metabolismo , Arabidopsis/efectos de los fármacos , Inhibidores Enzimáticos/farmacología , Regulación de la Expresión Génica de las Plantas/efectos de los fármacos , Hipocótilo/efectos de los fármacos , Aldehído Oxidasa/genética , Aldehído Oxidasa/metabolismo , Aminohidrolasas/genética , Apomorfina/análogos & derivados , Apomorfina/farmacología , Arabidopsis/crecimiento & desarrollo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Inhibidores Enzimáticos/administración & dosificación , Inhibidores Enzimáticos/química , Herbicidas/farmacología , Hipocótilo/crecimiento & desarrollo , Ácidos Indolacéticos , Estructura Molecular , Picloram/farmacología , Relación Estructura-Actividad , Transcriptoma/efectos de los fármacos
4.
Mol Plant Microbe Interact ; 34(5): 560-570, 2021 May.
Artículo en Inglés | MEDLINE | ID: mdl-33226310

RESUMEN

The beneficial root-colonizing fungus Colletotrichum tofieldiae mediates plant growth promotion (PGP) upon phosphate (Pi) starvation in Arabidopsis thaliana. This activity is dependent on the Trp metabolism of the host, including indole glucosinolate (IG) hydrolysis. Here, we show that C. tofieldiae resolves several Pi starvation-induced molecular processes in the host, one of which is the downregulation of auxin signaling in germ-free plants, which is restored in the presence of the fungus. Using CRISPR/Cas9 genome editing, we generated an Arabidopsis triple mutant lacking three homologous nitrilases (NIT1 to NIT3) that are thought to link IG-hydrolysis products with auxin biosynthesis. Retained C. tofieldiae-induced PGP in nit1/2/3 mutant plants demonstrated that this metabolic connection is dispensable for the beneficial activity of the fungus. This suggests that either there is an alternative metabolic link between IG-hydrolysis products and auxin biosynthesis, or C. tofieldiae restores auxin signaling independently of IG metabolism. We show that C. tofieldiae, similar to pathogenic microorganisms, triggers Arabidopsis immune pathways that rely on IG metabolism as well as salicylic acid and ethylene signaling. Analysis of IG-deficient myb mutants revealed that these metabolites are, indeed, important for control of in planta C. tofieldiae growth: however, enhanced C. tofieldiae biomass does not necessarily negatively correlate with PGP. We show that Pi deficiency enables more efficient colonization of Arabidopsis by C. tofieldiae, possibly due to the MYC2-mediated repression of ethylene signaling and changes in the constitutive IG composition in roots.[Formula: see text] Copyright © 2021 The Author(s). This is an open access article distributed under the CC BY-NC-ND 4.0 International license.


Asunto(s)
Proteínas de Arabidopsis , Arabidopsis , Colletotrichum , Arabidopsis/genética , Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Colletotrichum/metabolismo , Regulación de la Expresión Génica de las Plantas , Ácidos Indolacéticos , Redes y Vías Metabólicas , Fosfatos , Raíces de Plantas/metabolismo
5.
PLoS Biol ; 11(2): e1001482, 2013.
Artículo en Inglés | MEDLINE | ID: mdl-23424285

RESUMEN

Metabolic control of gene expression coordinates the levels of specific gene products to meet cellular demand for their activities. This control can be exerted by metabolites acting as regulatory signals and/or a class of metabolic enzymes with dual functions as regulators of gene expression. However, little is known about how metabolic signals affect the balance between enzymatic and regulatory roles of these dual functional proteins. We previously described the RNA binding activity of a 63 kDa chloroplast protein from Chlamydomonas reinhardtii, which has been implicated in expression of the psbA mRNA, encoding the D1 protein of photosystem II. Here, we identify this factor as dihydrolipoamide acetyltransferase (DLA2), a subunit of the chloroplast pyruvate dehydrogenase complex (cpPDC), which is known to provide acetyl-CoA for fatty acid synthesis. Analyses of RNAi lines revealed that DLA2 is involved in the synthesis of both D1 and acetyl-CoA. Gel filtration analyses demonstrated an RNP complex containing DLA2 and the chloroplast psbA mRNA specifically in cells metabolizing acetate. An intrinsic RNA binding activity of DLA2 was confirmed by in vitro RNA binding assays. Results of fluorescence microscopy and subcellular fractionation experiments support a role of DLA2 in acetate-dependent localization of the psbA mRNA to a translation zone within the chloroplast. Reciprocally, the activity of the cpPDC was specifically affected by binding of psbA mRNA. Beyond that, in silico analysis and in vitro RNA binding studies using recombinant proteins support the possibility that RNA binding is an ancient feature of dihydrolipoamide acetyltransferases. Our results suggest a regulatory function of DLA2 in response to growth on reduced carbon energy sources. This raises the intriguing possibility that this regulation functions to coordinate the synthesis of lipids and proteins for the biogenesis of photosynthetic membranes.


Asunto(s)
Carbono/metabolismo , Tilacoides/metabolismo , Chlamydomonas reinhardtii/metabolismo , Microscopía Fluorescente , Biogénesis de Organelos , Complejo de Proteína del Fotosistema II/metabolismo , Proteínas de Plantas/biosíntesis , Biosíntesis de Proteínas
6.
Planta ; 233(6): 1185-97, 2011 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-21327819

RESUMEN

Berberine, palmatine and dehydrocoreximine are end products of protoberberine biosynthesis. These quaternary protoberberines are elicitor inducible and, like other phytoalexins, are highly oxidized. The oxidative potential of these compounds is derived from a diverse array of biosynthetic steps involving hydroxylation, intra-molecular C-C coupling, methylenedioxy bridge formation and a dehydrogenation reaction as the final step in the biosynthesis. For the berberine biosynthetic pathway, the identification of the dehydrogenase gene is the last remaining uncharacterized step in the elucidation of the biosynthesis at the gene level. An enzyme able to catalyze these reactions, (S)-tetrahydroprotoberberine oxidase (STOX, EC 1.3.3.8), was originally purified in the 1980s from suspension cells of Berberis wilsoniae and identified as a flavoprotein (Amann et al. 1984). We report enzymatic activity from recombinant STOX expressed in Spodoptera frugiperda Sf9 insect cells. The coding sequence was derived successively from peptide sequences of purified STOX protein. Furthermore, a recombinant oxidase with protoberberine dehydrogenase activity was obtained from a cDNA library of Argemone mexicana, a traditional medicinal plant that contains protoberberine alkaloids. The relationship of the two enzymes is discussed regarding their enzymatic activity, phylogeny and the alkaloid occurrence in the plants. Potential substrate binding and STOX-specific amino acid residues were identified based on sequence analysis and homology modeling.


Asunto(s)
Argemone/enzimología , Berberis/enzimología , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/biosíntesis , Secuencia de Aminoácidos , Animales , Argemone/genética , Argemone/metabolismo , Secuencia de Bases , Alcaloides de Berberina/metabolismo , Berberis/genética , Berberis/metabolismo , Activación Enzimática , Flavoproteínas/metabolismo , Regulación de la Expresión Génica de las Plantas , Insectos/enzimología , Insectos/genética , Datos de Secuencia Molecular , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/genética , Oxidorreductasas actuantes sobre Donantes de Grupo CH-CH/metabolismo , Filogenia , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética , Homología de Secuencia , Sesquiterpenos/metabolismo , Transformación Genética , Fitoalexinas
7.
Proc Natl Acad Sci U S A ; 104(47): 18848-53, 2007 Nov 20.
Artículo en Inglés | MEDLINE | ID: mdl-18003897

RESUMEN

Members of the nitrilase 4 (NIT4) family of higher plants catalyze the conversion of beta-cyanoalanine to aspartic acid and asparagine, a key step in cyanide detoxification. Grasses (Poaceae) possess two different NIT4 homologs (NIT4A and NIT4B), but none of the recombinant Poaceae enzymes analyzed showed activity with beta-cyanoalanine, whereas protein extracts of the same plants clearly posses this activity. Sorghum bicolor contains three NIT4 isoforms SbNIT4A, SbNIT4B1, and SbNIT4B2. Individually, each isoform does not possess enzymatic activity whereas the heteromeric complexes SbNIT4A/B1 and SbNIT4A/B2 hydrolyze beta-cyanoalanine with high activity. In addition, the SbNIT4A/B2 complex accepts additional substrates, the best being 4-hydroxyphenylacetonitrile. Corresponding NIT4A and NIT4B isoforms from other Poaceae species can functionally complement the sorghum isoforms in these complexes. Site-specific mutagenesis of the active site cysteine residue demonstrates that hydrolysis of beta-cyanoalanine is catalyzed by the NIT4A isoform in both complexes whereas hydrolysis of 4-hydroxyphenylacetonitrile occurs at the NIT4B2 isoform. 4-Hydroxyphenylacetonitrile was shown to be an in vitro breakdown product of the cyanogenic glycoside dhurrin, a main constituent in S. bicolor. The results indicate that the SbNIT4A/B2 heterocomplex plays a key role in an endogenous turnover of dhurrin proceeding via 4-hydroxyphenylacetonitrile and thereby avoiding release of toxic hydrogen cyanide. The operation of this pathway would enable plants to use cyanogenic glycosides as transportable and remobilizable nitrogenous storage compounds. Through combinatorial biochemistry and neofunctionalizations, the small family of nitrilases has gained diverse biological functions in nitrile metabolism.


Asunto(s)
Aminohidrolasas/genética , Aminohidrolasas/metabolismo , Evolución Molecular , Nitrilos/metabolismo , Poaceae/enzimología , Poaceae/genética , Alanina/análogos & derivados , Alanina/metabolismo , Aminohidrolasas/aislamiento & purificación , Sitios de Unión , Cianuros/química , Cianuros/metabolismo , Cianuros/toxicidad , Cinética , Estructura Molecular , Nitrilos/química , Filogenia , Poaceae/efectos de los fármacos , Unión Proteica , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Especificidad por Sustrato
8.
Mol Biotechnol ; 41(1): 35-41, 2009 Jan.
Artículo en Inglés | MEDLINE | ID: mdl-18704770

RESUMEN

Nitrilases have attracted tremendous attention for the preparation of optically pure carboxylic acids. This article aims to address the production and utilization of a highly enantioselective nitrilase from Pseudomonas putida MTCC 5110 for the hydrolysis of racemic mandelonitrile to (R)-mandelic acid. The nitrilase gene from P. putida was cloned in pET 21b(+) and over-expressed as histidine-tagged protein in Escherichia coli. The histidine-tagged enzyme was purified from crude cell extracts of IPTG-induced cells of E. coli BL21 (DE3). Inducer replacement studies led to the identification of lactose as a suitable and cheap alternative to the costly IPTG. Effects of medium components, various physico-chemical, and process parameters (pH, temperature, aeration, and agitation) for the production of nitrilase by engineered E. coli were optimized and scaled up to a laboratory scale bioreactor (6.6 l). Finally, the recombinant E. coli whole-cells were utilized for the production of (R)-(-)-mandelic acid.


Asunto(s)
Aminohidrolasas/genética , Aminohidrolasas/metabolismo , Reactores Biológicos , Pseudomonas putida/enzimología , Acetonitrilos/metabolismo , Clonación Molecular , Escherichia coli/genética , Escherichia coli/metabolismo , Concentración de Iones de Hidrógeno , Ácidos Mandélicos/metabolismo , Reacción en Cadena de la Polimerasa , Pseudomonas putida/genética , Pseudomonas putida/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Estereoisomerismo
9.
Biosci Biotechnol Biochem ; 73(5): 1007-13, 2009 May.
Artículo en Inglés | MEDLINE | ID: mdl-19420721

RESUMEN

In previous reports we have reported that theobroxide induces characteristic accumulation of allene oxide cyclase (AOC; EC 5.3.99.6) protein and jasmonic acid (JA) in Pharbitis nil. In the present study, PnAOC, an AOC gene from Pharbitis nil was cloned. Immunofluorescence assays indicated that the AOC protein is located in the chloroplast of vascular bundles in Pharbitis nil leaves. The PnAOC cDNA sequence lacking the chloroplast signal peptide was successfully expressed in Escherichia coli, and a gas chromatography-mass spectrum assay suggested the relative AOC activity of the recombinant PnAOC protein in comparison with Arabidopsis AOC2. Interestingly, a biphasic expression of PnAOC was induced by theobroxide, which is consistent with the accumulation patterns of AOC protein and JA. All these results indicate that AOC is the primary target of theobroxide regulation and suggest that feedback regulation of PnAOC by JA occurs upon theobroxide treatment in Pharbitis nil.


Asunto(s)
Ciclohexanos/farmacología , Compuestos Epoxi/farmacología , Regulación Enzimológica de la Expresión Génica/efectos de los fármacos , Oxidorreductasas Intramoleculares/genética , Ipomoea nil/enzimología , Secuencia de Aminoácidos , Cloroplastos/metabolismo , Clonación Molecular , Escherichia coli/genética , Oxidorreductasas Intramoleculares/química , Oxidorreductasas Intramoleculares/metabolismo , Ipomoea nil/citología , Datos de Secuencia Molecular , Filogenia , Hojas de la Planta/citología , Hojas de la Planta/enzimología , Transporte de Proteínas , ARN Mensajero/metabolismo , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa
10.
Phytochemistry ; 69(15): 2655-67, 2008 Nov.
Artículo en Inglés | MEDLINE | ID: mdl-18842274

RESUMEN

The potential of plant nitrilases to convert indole-3-acetonitrile into the plant growth hormone indole-3-acetic acid has earned them the interim title of "key enzyme in auxin biosynthesis". Although not widely recognized, this view has changed considerably in the last few years. Recent work on plant nitrilases has shown them to be involved in the process of cyanide detoxification, in the catabolism of cyanogenic glycosides and presumably in the catabolism of glucosinolates. All plants possess at least one nitrilase that is homologous to the nitrilase 4 isoform of Arabidopsis thaliana. The general function of these nitrilases lies in the process of cyanide detoxification, in which they convert the intermediate detoxification product beta-cyanoalanine into asparagine, aspartic acid and ammonia. Cyanide is a metabolic by-product in biosynthesis of the plant hormone ethylene, but it may also be released from cyanogenic glycosides, which are present in a large number of plants. In Sorghum bicolor, an additional nitrilase isoform has been identified, which can directly use a catabolic intermediate of the cyanogenic glycoside dhurrin, thus enabling the plant to metabolize its cyanogenic glycoside without releasing cyanide. In the Brassicaceae, a family of nitrilases has evolved, the members of which are able to hydrolyze catabolic products of glucosinolates, the predominant secondary metabolites of these plants. Thus, the general theme of nitrilase function in plants is detoxification and nitrogen recycling, since the valuable nitrogen of the nitrile group is recovered in the useful metabolites asparagine or ammonia. Taken together, a picture emerges in which plant nitrilases have versatile functions in plant metabolism, whereas their importance for auxin biosynthesis seems to be minor.


Asunto(s)
Aminohidrolasas/metabolismo , Plantas/enzimología , Plantas/metabolismo , Aminohidrolasas/genética , Clonación Molecular , Filogenia , Células Vegetales , Plantas/genética , Procesamiento Proteico-Postraduccional , Transporte de Proteínas
11.
Commun Biol ; 1: 186, 2018.
Artículo en Inglés | MEDLINE | ID: mdl-30417123

RESUMEN

Nitrilases are oligomeric, helix-forming enzymes from plants, fungi and bacteria that are involved in the metabolism of various natural and artificial nitriles. These biotechnologically important enzymes are often specific for certain substrates, but directed attempts at modifying their substrate specificities by exchanging binding pocket residues have been largely unsuccessful. Thus, the basis for their selectivity is still unknown. Here we show, based on work with two highly similar nitrilases from the plant Capsella rubella, that modifying nitrilase helical twist, either by exchanging an interface residue or by imposing a different twist, without altering any binding pocket residues, changes substrate preference. We reveal that helical twist and substrate size correlate and when binding pocket residues are exchanged between two nitrilases that show the same twist but different specificities, their specificities change. Based on these findings we propose that helical twist influences the overall size of the binding pocket.

12.
J Exp Bot ; 58(15-16): 4225-33, 2007.
Artículo en Inglés | MEDLINE | ID: mdl-18182427

RESUMEN

The auxin indole-3-acetic acid (IAA), which is essential for plant growth and development, is suggested to be synthesized via several redundant pathways. In maize (Zea mays), the nitrilase ZmNIT2 is expressed in auxin-synthesizing tissues and efficiently hydrolyses indole-3-acetonitrile to IAA. Zmnit2 transposon insertion mutants were compromised in root growth in young seedlings and sensitivity to indole-3-acetonitrile, and accumulated lower quantities of IAA conjugates in kernels and root tips, suggesting a substantial contribution of ZmNIT2 to total IAA biosynthesis in maize. An additional enzymatic function, turnover of beta-cyanoalanine, is acquired when ZmNIT2 forms heteromers with the homologue ZmNIT1. In plants carrying an insertion mutation in either nitrilase gene this activity was strongly reduced. A dual role for ZmNIT2 in auxin biosynthesis and in cyanide detoxification as a heteromer with ZmNIT1 is therefore proposed.


Asunto(s)
Alanina/análogos & derivados , Aminohidrolasas/metabolismo , Ácidos Indolacéticos/metabolismo , Indoles/metabolismo , Zea mays/enzimología , Alanina/metabolismo , Cianuros/metabolismo , Frutas/metabolismo , Homeostasis/fisiología , Hidrólisis , Luz , Mutagénesis Insercional , Fenotipo , Raíces de Plantas/crecimiento & desarrollo , Raíces de Plantas/metabolismo , Estructura Cuaternaria de Proteína , Plantones/metabolismo , Zea mays/genética
13.
Front Plant Sci ; 8: 36, 2017.
Artículo en Inglés | MEDLINE | ID: mdl-28174581

RESUMEN

Nitrilases consist of a group of enzymes that catalyze the hydrolysis of organic cyanides. They are found ubiquitously distributed in the plant kingdom. Plant nitrilases are mainly involved in the detoxification of ß-cyanoalanine, a side-product of ethylene biosynthesis. In the model plant Arabidopsis thaliana a second group of Brassicaceae-specific nitrilases (NIT1-3) has been found. This so-called NIT1-subfamily has been associated with the conversion of indole-3-acetonitrile (IAN) into the major plant growth hormone, indole-3-acetic acid (IAA). However, apart of reported functions in defense responses to pathogens and in responses to sulfur depletion, conclusive insight into the general physiological function of the NIT-subfamily nitrilases remains elusive. In this report, we test both the contribution of the indole-3-acetaldoxime (IAOx) pathway to general auxin biosynthesis and the influence of altered nitrilase expression on plant development. Apart of a comprehensive transcriptomics approach to explore the role of the IAOx route in auxin formation, we took a genetic approach to disclose the function of NITRILASE 1 (NIT1) of A. thaliana. We show that NIT1 over-expression (NIT1ox) results in seedlings with shorter primary roots, and an increased number of lateral roots. In addition, NIT1ox plants exhibit drastic changes of both free IAA and IAN levels, which are suggested to be the reason for the observed phenotype. On the other hand, NIT2RNAi knockdown lines, capable of suppressing the expression of all members of the NIT1-subfamily, were generated and characterized to substantiate the above-mentioned findings. Our results demonstrate for the first time that Arabidopsis NIT1 has profound effects on root morphogenesis in early seedling development.

14.
Phytochemistry ; 136: 15-22, 2017 Apr.
Artículo en Inglés | MEDLINE | ID: mdl-28162767

RESUMEN

Plant terpenoids are a large and highly diverse class of metabolites with an important role in the immune defense. They find wide industrial application as active pharmaceutical ingredients, aroma and fragrance compounds. Several Eremophila sp. derived terpenoids have been documented. To elucidate the terpenoid metabolism, the transcriptome of juvenile and mature Eremophila serrulata (A.DC.) Druce (Scrophulariaceae) leaves was sequenced and a transcript library was generated. We report on the first transcriptomic dataset of an Eremophila plant. IlluminaMiSeq sequencing (2 × 300 bp) revealed 7,093,266 paired reads, which could be assembled to 34,505 isogroups. To enable detection of terpene biosynthetic genes, leaves were separately treated with methyl jasmonate, a well-documented inducer of plant secondary metabolites. In total, 21 putative terpene synthase genes were detected in the transcriptome data. Two terpene synthase isoenzymatic genes, termed ES01 and ES02, were successfully expressed in E. coli. The resulting proteins catalyzed the conversion of geranyl pyrophosphate, the universal substrate of monoterpene synthases to myrcene and Z-(b)-ocimene, respectively. The transcriptomic data and the discovery of the first terpene synthases from Eremophila serrulata are the initial step for the understanding of the terpene metabolism in this medicinally important plant genus.


Asunto(s)
Transferasas Alquil y Aril/metabolismo , Terpenos/metabolismo , Acetatos , Monoterpenos Acíclicos , Alquenos , Australia , Ciclopentanos , Eremophila (Planta) , Escherichia coli/genética , Perfilación de la Expresión Génica , Liasas Intramoleculares/metabolismo , Monoterpenos , Oxilipinas , Proteínas de Plantas/metabolismo , Fosfatos de Poliisoprenilo/metabolismo , Scrophulariaceae/genética
15.
FEBS Lett ; 580(18): 4527-32, 2006 Aug 07.
Artículo en Inglés | MEDLINE | ID: mdl-16872603

RESUMEN

Intron-binding proteins in eukaryotic organelles are mainly encoded by the nuclear genome and are thought to promote the maturation of precursor RNAs. Here, we present a biochemical approach that enable the isolation of a novel nuclear-encoded protein from Chlamydomonas reinhardtii showing specific binding properties to organelle group II intron RNA. Using FPLC chromatography of chloroplast protein extracts, a 61-kDa RNA-binding protein was isolated and then tentatively identified by mass spectrometry as the chloroplast heat shock protein Cpn60. Heterologous Cpn60 protein was used in RNA protein gel mobility shift assays and revealed that the ATPase domains of Cpn60 mediates the specific binding of two group II intron RNAs, derived from the homologous chloroplast psaA gene and the heterologous mitochondrial LSU rRNA gene. The function of Cpn60 as a general organelle splicing factor is discussed.


Asunto(s)
Chaperonina 60/fisiología , Chlamydomonas reinhardtii/genética , Cloroplastos/genética , Intrones , Proteínas de Plantas/fisiología , Proteínas de Unión al ARN/metabolismo , Animales , Chaperonina 60/aislamiento & purificación , Chlamydomonas reinhardtii/química , Cloroplastos/química , Espectrometría de Masas , Proteínas de Plantas/análisis , Proteínas de Plantas/aislamiento & purificación , Empalme del ARN , Proteínas de Unión al ARN/análisis , Proteínas de Unión al ARN/aislamiento & purificación
16.
Mol Biochem Parasitol ; 142(2): 212-23, 2005 Aug.
Artículo en Inglés | MEDLINE | ID: mdl-15904985

RESUMEN

The parasitic flagellate Trichomonas vaginalis contains hydrogenosomes, anaerobic organelles related to mitochondria, that generate ATP from the fermentative conversion of pyruvate to acetate, CO2 and molecular hydrogen. Although an essentially anaerobic organism, Trichomonas encounters low oxygen concentrations in its natural habitat and has to protect itself, and especially the oxygen-sensitve enzymes of hydrogenosomal metabolism, from oxidative damage. We have identified two novel proteins in the hydrogenosomal proteome with strong similarity to two putative prokaryotic peroxidases, rubrerythrin and periplasmic thiol peroxidase. Both proteins have previously been found in many prokaryotes but were not known from eukaryotes, suggesting a significant prokaryotic component in the oxygen-detoxification system of trichomonad hydrogenosomes.


Asunto(s)
Hidrógeno/metabolismo , Orgánulos/enzimología , Peroxidasas/metabolismo , Proteínas Protozoarias/metabolismo , Trichomonas vaginalis/enzimología , Secuencia de Aminoácidos , Animales , Proteínas Bacterianas , Ferredoxinas , Hemeritrina , Datos de Secuencia Molecular , Estrés Oxidativo , Oxígeno/farmacología , Peroxidasas/química , Peroxidasas/genética , Peroxirredoxinas , Filogenia , Proteoma , Proteínas Protozoarias/química , Proteínas Protozoarias/genética , Rubredoxinas , Alineación de Secuencia , Trichomonas vaginalis/genética , Trichomonas vaginalis/fisiología
17.
Z Naturforsch C J Biosci ; 60(1-2): 109-15, 2005.
Artículo en Inglés | MEDLINE | ID: mdl-15787254

RESUMEN

The fungus Venturia inaequalis clone No. 36 isolated from Malus domestica cv. Gloster excretes a melanoprotein of 36 kDa in relatively high amounts during growth in liquid culture. The protein was isolated from the culture medium and purified to homogeneity. It was shown to contain melanin. After raising an antiserum against the isolated protein, the protein could be shown to be located in the apoplast fluid of the V. inaequalis infected Malus domestica cv. Elstar. Partial sequencing of the protein revealed no significant sequence homologies to so far sequenced proteins. The melanoprotein binds ferrous and ferric iron. Moreover, it could be shown that the binding of ferric iron (but not of ferrous iron) leads to a change in the absorbance of the protein suggesting a modification of the protein by ferric, but not by ferrous, iron. In addition to iron, the protein also binds copper, but does not bind manganese or nickel. A possible function of this protein in the recruiting and transport of iron and copper and/or in the protection of the fungus by metal-ion mediated oxidative stress is discussed.


Asunto(s)
Ascomicetos/metabolismo , Proteínas Fúngicas/metabolismo , Melaninas/metabolismo , Proteínas/metabolismo , Secuencia de Aminoácidos , Ascomicetos/crecimiento & desarrollo , Medios de Cultivo , Proteínas Fúngicas/química , Proteínas Fúngicas/aislamiento & purificación , Cinética , Melaninas/química , Melaninas/aislamiento & purificación , Metales/farmacología , Datos de Secuencia Molecular , Peso Molecular , Fragmentos de Péptidos/química , Proteínas/química , Proteínas/aislamiento & purificación
18.
FEBS Lett ; 544(1-3): 258-61, 2003 Jun 05.
Artículo en Inglés | MEDLINE | ID: mdl-12782327

RESUMEN

The cloning, expression and characterization of plant agmatine iminohydrolase (AIH, also known as agmatine deiminase, EC 3.5.3.12) is described. Recombinant AIH of Arabidopsis thaliana forms dimers and catalyzes the specific conversion of agmatine to N-carbamoylputrescine and ammonia. Biochemical data suggested that cysteine side chains are involved in catalysis. However, site-directed mutagenesis of the two highly conserved cysteine residues of AIH showed that these cysteines are important but not essential for activity, arguing against a thioester substrate-enzyme intermediate during catalysis. This work represents the completion of the cloning of the arginine decarboxylase pathway genes of higher plants.


Asunto(s)
Hidrolasas/química , Plantas/enzimología , Putrescina/análogos & derivados , Amoníaco/química , Arabidopsis/metabolismo , Arginina/química , Catálisis , Dominio Catalítico , Clonación Molecular , Cisteína/química , Dimerización , Relación Dosis-Respuesta a Droga , Electroforesis en Gel de Poliacrilamida , Hidrolasas/inmunología , Hidrólisis , Modelos Químicos , Datos de Secuencia Molecular , Mutagénesis Sitio-Dirigida , Poliaminas , Unión Proteica , Putrescina/química , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Factores de Tiempo
19.
Z Naturforsch C J Biosci ; 59(11-12): 843-8, 2004.
Artículo en Inglés | MEDLINE | ID: mdl-15666544

RESUMEN

The intercellular washing fluid (IWF) of Malus domestica cv. Holsteiner Cox before and after application of the non-pathogenic bacterium Pseudomonas fluorescens Bk3 to the leaves was investigated in a comparative manner. SDS-PAGE in combination with ESI Q-ToF mass spectrometry, and homology search in relevant data bases revealed the highly up-regulated expression of several pathogenesis-related plant proteins in the apoplast of the leaves treated with P. fluorescens. These proteins were beta3-1,3-glucanase, chitinase, thaumatin-like protein, ribonuclease-like protein, and a hevein-like protein. Moreover, a 9 kDa non-specific lipid transfer protein was significantly reduced after the application of P. fluorescens. The possible relevance of a pre-treatment of apple cultivars with the non-pathogenic bacterium P. fluorescens Bk3, as an alternative method to the treatment with fungicides, for increasing the resistance of susceptible apple cultivars against an infection with the fungus Venturia inaequalis is discussed.


Asunto(s)
Malus/genética , Malus/microbiología , Proteínas de Plantas/genética , Pseudomonas fluorescens/crecimiento & desarrollo , Secuencia de Aminoácidos , Regulación de la Expresión Génica de las Plantas , Datos de Secuencia Molecular , Fragmentos de Péptidos/química , Hojas de la Planta/metabolismo , Proteínas de Plantas/química , Reacción en Cadena de la Polimerasa de Transcriptasa Inversa , Transcripción Genética
20.
PLoS One ; 7(4): e35545, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22536404

RESUMEN

Plants have evolved a variety of mechanisms for dealing with insect herbivory among which chemical defense through secondary metabolites plays a prominent role. Physiological, behavioural and sensorical adaptations to these chemicals provide herbivores with selective advantages allowing them to diversify within the newly occupied ecological niche. In turn, this may influence the evolution of plant metabolism giving rise to e.g. new chemical defenses. The association of Pierid butterflies and plants of the Brassicales has been cited as an illustrative example of this adaptive process known as 'coevolutionary armsrace'. All plants of the Brassicales are defended by the glucosinolate-myrosinase system to which larvae of cabbage white butterflies and related species are biochemically adapted through a gut nitrile-specifier protein. Here, we provide evidence by metabolite profiling and enzyme assays that metabolism of benzylglucosinolate in Pieris rapae results in release of equimolar amounts of cyanide, a potent inhibitor of cellular respiration. We further demonstrate that P. rapae larvae develop on transgenic Arabidopsis plants with ectopic production of the cyanogenic glucoside dhurrin without ill effects. Metabolite analyses and fumigation experiments indicate that cyanide is detoxified by ß-cyanoalanine synthase and rhodanese in the larvae. Based on these results as well as on the facts that benzylglucosinolate was one of the predominant glucosinolates in ancient Brassicales and that ancient Brassicales lack nitrilases involved in alternative pathways, we propose that the ability of Pierid species to safely handle cyanide contributed to the primary host shift from Fabales to Brassicales that occured about 75 million years ago and was followed by Pierid species diversification.


Asunto(s)
Arabidopsis/metabolismo , Mariposas Diurnas/metabolismo , Glucosinolatos/metabolismo , Nasturtium/metabolismo , Nitrilos/metabolismo , Hojas de la Planta/metabolismo , Tropaeolum/metabolismo , Aminohidrolasas/genética , Aminohidrolasas/metabolismo , Animales , Arabidopsis/genética , Heces/química , Herbivoria , Hidroxilación , Proteínas de Insectos/química , Proteínas de Insectos/aislamiento & purificación , Larva/enzimología , Larva/metabolismo , Microsomas/enzimología , Microsomas/metabolismo , Nasturtium/genética , Hojas de la Planta/genética , Tiocianatos/metabolismo , Tioglucósidos/metabolismo , Tropaeolum/genética
SELECCIÓN DE REFERENCIAS
DETALLE DE LA BÚSQUEDA