A global reptile assessment highlights shared conservation needs of tetrapods.

Comprehensive assessments of species' extinction risks have documented the extinction crisis1 and underpinned strategies for reducing those risks2. Global assessments reveal that, among tetrapods, 40.7% of amphibians, 25.4% of mammals and 13.6% of birds are threatened with extinction3. Because global assessments have been lacking, reptiles have been omitted from conservation-prioritization analyses that encompass other tetrapods4-7. Reptiles are unusually diverse in arid regions, suggesting that they may have different conservation needs6. Here we provide a comprehensive extinction-risk assessment of reptiles and show that at least 1,829 out of 10,196 species (21.1%) are threatened-confirming a previous extrapolation8 and representing 15.6 billion years of phylogenetic diversity. Reptiles are threatened by the same major factors that threaten other tetrapods-agriculture, logging, urban development and invasive species-although the threat posed by climate change remains uncertain. Reptiles inhabiting forests, where these threats are strongest, are more threatened than those in arid habitats, contrary to our prediction. Birds, mammals and amphibians are unexpectedly good surrogates for the conservation of reptiles, although threatened reptiles with the smallest ranges tend to be isolated from other threatened tetrapods. Although some reptiles-including most species of crocodiles and turtles-require urgent, targeted action to prevent extinctions, efforts to protect other tetrapods, such as habitat preservation and control of trade and invasive species, will probably also benefit many reptiles.

Multinational evaluation of genetic diversity indicators for the Kunming-Montreal Global Biodiversity Framework.

Under the recently adopted Kunming-Montreal Global Biodiversity Framework, 196 Parties committed to reporting the status of genetic diversity for all species. To facilitate reporting, three genetic diversity indicators were developed, two of which focus on processes contributing to genetic diversity conservation: maintaining genetically distinct populations and ensuring populations are large enough to maintain genetic diversity. The major advantage of these indicators is that they can be estimated with or without DNA-based data. However, demonstrating their feasibility requires addressing the methodological challenges of using data gathered from diverse sources, across diverse taxonomic groups, and for countries of varying socio-economic status and biodiversity levels. Here, we assess the genetic indicators for 919 taxa, representing 5271 populations across nine countries, including megadiverse countries and developing economies. Eighty-three percent of the taxa assessed had data available to calculate at least one indicator. Our results show that although the majority of species maintain most populations, 58% of species have populations too small to maintain genetic diversity. Moreover, genetic indicator values suggest that IUCN Red List status and other initiatives fail to assess genetic status, highlighting the critical importance of genetic indicators.

Phylogeography, hybrid zones and contemporary species boundaries in the south-eastern Australian smooth frogs (Anura: Myobatrachidae: Geocrinia).

Paleo-climatic fluctuations have driven episodic changes in species distributions, providing opportunities for populations to diverge in isolation and hybridise following secondary contact. Studies of phylogeographic diversity and patterns of gene flow across hybrid zones can provide insight into contemporary species boundaries and help to inform taxonomic and conservation inferences. Here we explore geographic diversity within the acoustically divergent yet morphologically conserved south-eastern Australian smooth frog complex and assess gene flow across a narrow hybrid zone using mitochondrial nucleotide sequences and nuclear genome-wide single nucleotide polymorphisms. Our analyses reveal the presence of an evolutionarily distinct taxon restricted to the Otway Plains and Ranges, Victoria, which forms a narrow (9-30 km wide), spatiotemporally stable (>50 years) hybrid zone with Geocrinia laevis, which we describe herein as a new species.

Evolution of diel activity patterns in skinks (Squamata: Scincidae), the world's second-largest family of terrestrial vertebrates.

Many animals have strict diel activity patterns, with unique adaptations for either diurnal or nocturnal activity. Diel activity is phylogenetically conserved, yet evolutionary shifts in diel activity occur and lead to important changes in an organism's morphology, physiology, and behavior. We use phylogenetic comparative methods to examine the evolutionary history of diel activity in skinks, one of the largest families of terrestrial vertebrates. We examine how diel patterns are associated with microhabitat, ambient temperatures, and morphology. We found support for a nondiurnal ancestral skink. Strict diurnality in crown group skinks only evolved during the Paleogene. Nocturnal habits are associated with fossorial activity, limb reduction and loss, and warm temperatures. Our results shed light on the evolution of diel activity patterns in a large radiation of terrestrial ectotherms and reveal how both intrinsic biotic and extrinsic abiotic factors can shape the evolution of animal activity patterns.

Nomenclature of supra-generic units within the Family Scincidae (Squamata).

The modern classification of skinks is based on a nomenclature that dates to the 1970s. However, there are a number of earlier names in the family group that have been overlooked by recent workers. These names are identified and their validity with respect to the International Code of Zoological Nomenclature investigated, along with their type genera. In most cases, use of these names to supplant junior synonyms in modern day use is avoidable by use of the Reversal of Precedence articles of the Code, but the names remain available in case of future divisions at the tribe and subtribe level. Other names are unavailable due to homonymy, either of their type genera or the stems from similar but non-homonymous type genera. However, the name Egerniini is replaced by Tiliquini, due to a limited timespan of use of Egerniini. A new classification of the Family Scincidae is proposed, providing a more extensive use of Code-regulated levels of classification, including tribes and subtribes, and a detailed synonymy provided for each taxonomic unit.

The identity of twelve scincid generic names proposed by Cope in 1892 (Squamata: Scincidae).

The twelve generic names proposed by Cope in 1892, which were created without included species, are linked to existing taxa by recognition that Copes key is a simple modification of the previous skink generic key by Boulenger in 1887, splitting existing genera of Boulenger in accordance with the morphology of the species included in those genera. This insight allows for Copes generic names Dicloniscus, Dimeropus, Haploscincus, Ollochirus, Oncopus, Podoclonium and Tridentulus to be linked to single species in Boulengers treatment, and thus those species are identified as the types of those genera, resulting in synonymy of Dicloniscus with Chalcides, Dimeropus with Larutia, Haploscincus with Lipinia, Podoclonium with Scelotes, and Ollochirus, Oncopus and Tridentulus with Lerista. Furcillus, Mesomycterus, Monophorus and Monophyaspis are associated with multiple species in Boulengers classification, and type species are designated that minimize change to existing nomenclature but facilitate application of the names to otherwise unnamed lineages in case future divisions are considered warranted. Furcillus becomes a synonym of Lerista, Mesomycterus becomes a synonym of Brachyseps, Monophorus becomes a synonym of Phoboscincus and Monophyaspis becomes a synonym of Trachylepis. Lepidothyrus, for which a type species was previously identified, is a synonym of Mochlus. Reversal of precedence is invoked to avoid the need for use of the senior synonyms Dimeropus and Monophorus over the frequently used Larutia and Phoboscincus, however, Mesomycterus is a senior synonym of Brachyseps, and replaces that recently created name.

Mabuia wirzi Roux, 1925 (Squamata: Scincidae), an overlooked synonym of Dasia olivacea Gray, 1839, with notes on the synonymy of Dasia olivacea.

Almost a century ago, the Swiss herpetologist Jean Roux described a new skink species, Mabuia wirzi, from a single specimen from Pulau Nias, an island on the west coast of Sumatra in Indonesia (Roux 1925). The specimen was part of a small collection of reptiles and amphibians made on Nias by the ethnologist Paul Wirz (29.v.1892-1955.i.30), who worked on Nias in 1925 and 1926 (Wirz 1928, 1929). Roux's paper was published in October 1925, and hence the specimen would have come from Wirz's first expedition, and would have been only recently preserved at the time of description.

Resolution of the types and type localities of some early nominal species of the Australian myobatrachid frog genus Pseudophryne Fitzinger, 1843.

The types and type localities of Bombinator australis Gray, 1835, Pseudophryne bibronii Günther, 1859, and Phryniscus albifrons Duméril, Bibron Duméril, 1854, are defined. The nominal type locality for B. australis, Swan River, is considered to be in error. The source of the specimen, Joseph Wright, owned property in the Swan River colony in Western Australia, but later resided in Sydney, the latter locality within the known range of the species. We designate a specimen in the Museum National d'Histoire Naturelle, Paris as lectotype of Pseudophryne bibronii, restricting the type locality of both species to Parramatta, near Sydney, based on the published statements of the collector, François Péron. The holotype of Phryniscus albifrons, a species defined by a painting of a specimen, was likely to have been collected by Jules Verreaux, but the only extant Pseudophryne obtained from Verreaux does not match the type illustration. Verreaux is renowned for the numerous errors in the localities associated with his specimens, and the locality for this specimen, Moreton Bay, Queensland, is likely to be another such error. Resolution of these issues facilitates ongoing taxonomic work on the genus using genetic and morphological data.

A new species of Anilios (Scolecophidia: Typhlopidae) from Central Australia.

Anilios fossor sp. nov. is described from a single specimen collected in 1989 from Ruby Gap Nature Park, Northern Territory. The species differs from all other Anilios species in the combination of 20 midbody scales, 514 dorsal scales, a rounded, non-angulate snout in lateral and dorsal profile, a nasal cleft contacting the second supralabial and not extending to the head dorsum, and a large round rostral shield in dorsal view. It is unclear whether the paucity of material of this species represents a limited distribution, or poor sampling in a remote, sparsely settled part of the continent. Evidence for the recognition of the Australian typhlopid fauna as a distinct genus Anilios is critically reviewed, and the genus is found to be recognizable only on genetic evidence. Some other recent nomenclatural and taxonomic changes in the Australian typhlopid fauna are considered and rejected.

The reproductive biology and larvae of the first tadpole-bearing frog, Limnonectes larvaepartus.

Most of the reproductive modes of frogs include an exotrophic tadpole, but a number of taxa have some form of endotrophic development that lacks a feeding tadpole stage. The dicroglossid frog genus Limnonectes ranges from China south into Indonesia. The breeding biologies of the approximately 60 described species display an unusual diversity that range from exotrophic tadpoles to endotrophic development in terrestrial nests. There have been mentions of oviductal production of typical, exotrophic tadpoles in an undescribed species of Limnonectes from Sulawesi, Indonesia. Here we examine newly collected specimens of this species, now described as L. larvaepartus and present the first substantial report on this unique breeding mode. Typical exotrophic tadpoles that are retained to an advanced developmental stage in the oviducts of a female frog are birthed into slow-flowing streams or small, non-flowing pools adjacent to the streams.