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1.
New Phytol ; 243(2): 526-536, 2024 Jul.
Artículo en Inglés | MEDLINE | ID: mdl-38803120

RESUMEN

Forests make immense contributions to societies in the form of ecological services and sustainable industrial products. However, they face major challenges to their viability and economic use due to climate change and growing biotic and economic threats, for which recombinant DNA (rDNA) technology can sometimes provide solutions. But the application of rDNA technologies to forest trees faces major social and biological obstacles that make its societal acceptance a 'wicked' problem without straightforward solutions. We discuss the nature of these problems, and the social and biological innovations that we consider essential for progress. As case studies of biological challenges, we focus on studies of modifications in wood chemistry and transformation efficiency. We call for major innovations in regulations, and the dissolution of method-based market barriers, that together could lead to greater research investments, enable wide use of field studies, and facilitate the integration of rDNA-modified trees into conventional breeding programs. Without near-term adoption of such innovations, rDNA-based solutions will be largely unavailable to help forests adapt to the growing stresses from climate change and the proliferation of forest pests, nor will they be available to provide economic and environmental benefits from expanded use of wood and related bioproducts as part of an expanding bioeconomy.


Asunto(s)
Biotecnología , Bosques , Biotecnología/métodos , Madera , Árboles , Cambio Climático
2.
New Phytol ; 242(5): 2059-2076, 2024 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-38650352

RESUMEN

Wide variation in amenability to transformation and regeneration (TR) among many plant species and genotypes presents a challenge to the use of genetic engineering in research and breeding. To help understand the causes of this variation, we performed association mapping and network analysis using a population of 1204 wild trees of Populus trichocarpa (black cottonwood). To enable precise and high-throughput phenotyping of callus and shoot TR, we developed a computer vision system that cross-referenced complementary red, green, and blue (RGB) and fluorescent-hyperspectral images. We performed association mapping using single-marker and combined variant methods, followed by statistical tests for epistasis and integration of published multi-omic datasets to identify likely regulatory hubs. We report 409 candidate genes implicated by associations within 5 kb of coding sequences, and epistasis tests implicated 81 of these candidate genes as regulators of one another. Gene ontology terms related to protein-protein interactions and transcriptional regulation are overrepresented, among others. In addition to auxin and cytokinin pathways long established as critical to TR, our results highlight the importance of stress and wounding pathways. Potential regulatory hubs of signaling within and across these pathways include GROWTH REGULATORY FACTOR 1 (GRF1), PHOSPHATIDYLINOSITOL 4-KINASE ß1 (PI-4Kß1), and OBF-BINDING PROTEIN 1 (OBP1).


Asunto(s)
Estudio de Asociación del Genoma Completo , Reguladores del Crecimiento de las Plantas , Populus , Populus/genética , Reguladores del Crecimiento de las Plantas/metabolismo , Redes Reguladoras de Genes , Epistasis Genética , Genes de Plantas , Regulación de la Expresión Génica de las Plantas , Fenotipo , Transducción de Señal/genética
3.
New Phytol ; 238(6): 2561-2577, 2023 06.
Artículo en Inglés | MEDLINE | ID: mdl-36807327

RESUMEN

Ectomycorrhizas are an intrinsic component of tree nutrition and responses to environmental variations. How epigenetic mechanisms might regulate these mutualistic interactions is unknown. By manipulating the level of expression of the chromatin remodeler DECREASE IN DNA METHYLATION 1 (DDM1) and two demethylases DEMETER-LIKE (DML) in Populus tremula × Populus alba lines, we examined how host DNA methylation modulates multiple parameters of the responses to root colonization with the mutualistic fungus Laccaria bicolor. We compared the ectomycorrhizas formed between transgenic and wild-type (WT) trees and analyzed their methylomes and transcriptomes. The poplar lines displaying lower mycorrhiza formation rate corresponded to hypomethylated overexpressing DML or RNAi-ddm1 lines. We found 86 genes and 288 transposable elements (TEs) differentially methylated between WT and hypomethylated lines (common to both OX-dml and RNAi-ddm1) and 120 genes/1441 TEs in the fungal genome suggesting a host-induced remodeling of the fungal methylome. Hypomethylated poplar lines displayed 205 differentially expressed genes (cis and trans effects) in common with 17 being differentially methylated (cis). Our findings suggest a central role of host and fungal DNA methylation in the ability to form ectomycorrhizas including not only poplar genes involved in root initiation, ethylene and jasmonate-mediated pathways, and immune response but also terpenoid metabolism.


Asunto(s)
Laccaria , Micorrizas , Populus , Micorrizas/fisiología , Árboles/genética , Árboles/metabolismo , Raíces de Plantas/metabolismo , Metilación de ADN/genética , ADN , Populus/metabolismo , Laccaria/genética
4.
Proc Natl Acad Sci U S A ; 117(3): 1596-1605, 2020 01 21.
Artículo en Inglés | MEDLINE | ID: mdl-31907313

RESUMEN

Hybrid-poplar tree plantations provide a source for biofuel and biomass, but they also increase forest isoprene emissions. The consequences of increased isoprene emissions include higher rates of tropospheric ozone production, increases in the lifetime of methane, and increases in atmospheric aerosol production, all of which affect the global energy budget and/or lead to the degradation of air quality. Using RNA interference (RNAi) to suppress isoprene emission, we show that this trait, which is thought to be required for the tolerance of abiotic stress, is not required for high rates of photosynthesis and woody biomass production in the agroforest plantation environment, even in areas with high levels of climatic stress. Biomass production over 4 y in plantations in Arizona and Oregon was similar among genetic lines that emitted or did not emit significant amounts of isoprene. Lines that had substantially reduced isoprene emission rates also showed decreases in flavonol pigments, which reduce oxidative damage during extremes of abiotic stress, a pattern that would be expected to amplify metabolic dysfunction in the absence of isoprene production in stress-prone climate regimes. However, compensatory increases in the expression of other proteomic components, especially those associated with the production of protective compounds, such as carotenoids and terpenoids, and the fact that most biomass is produced prior to the hottest and driest part of the growing season explain the observed pattern of high biomass production with low isoprene emission. Our results show that it is possible to reduce the deleterious influences of isoprene on the atmosphere, while sustaining woody biomass production in temperate agroforest plantations.


Asunto(s)
Atmósfera , Hemiterpenos/biosíntesis , Hibridación Genética , Populus/crecimiento & desarrollo , Populus/metabolismo , Contaminación del Aire , Arizona , Biocombustibles , Biomasa , Butadienos , Dióxido de Carbono/metabolismo , Carotenoides/metabolismo , Clima , Oregon , Fotosíntesis , Hojas de la Planta/metabolismo , Brotes de la Planta/genética , Brotes de la Planta/crecimiento & desarrollo , Plantas Modificadas Genéticamente/metabolismo , Populus/genética , Proteoma , Interferencia de ARN , Estaciones del Año , Estrés Fisiológico , Terpenos/metabolismo , Termotolerancia/fisiología , Madera
5.
Plant Cell ; 31(10): 2386-2410, 2019 10.
Artículo en Inglés | MEDLINE | ID: mdl-31416823

RESUMEN

Mycorrhizal fungi form mutualistic associations with the roots of most land plants and provide them with mineral nutrients from the soil in exchange for fixed carbon derived from photosynthesis. The common symbiosis pathway (CSP) is a conserved molecular signaling pathway in all plants capable of associating with arbuscular mycorrhizal fungi. It is required not only for arbuscular mycorrhizal symbiosis but also for rhizobia-legume and actinorhizal symbioses. Given its role in such diverse symbiotic associations, we hypothesized that the CSP also plays a role in ectomycorrhizal associations. We showed that the ectomycorrhizal fungus Laccaria bicolor produces an array of lipochitooligosaccharides (LCOs) that can trigger both root hair branching in legumes and, most importantly, calcium spiking in the host plant Populus in a CASTOR/POLLUX-dependent manner. Nonsulfated LCOs enhanced lateral root development in Populus in a calcium/calmodulin-dependent protein kinase (CCaMK)-dependent manner, and sulfated LCOs enhanced the colonization of Populus by L. bicolor Compared with the wild-type Populus, the colonization of CASTOR/POLLUX and CCaMK RNA interference lines by L. bicolor was reduced. Our work demonstrates that similar to other root symbioses, L. bicolor uses the CSP for the full establishment of its mutualistic association with Populus.


Asunto(s)
Canales de Calcio/metabolismo , Proteínas Quinasas Dependientes de Calcio-Calmodulina/metabolismo , Calcio/metabolismo , Laccaria/metabolismo , Lipopolisacáridos/metabolismo , Raíces de Plantas/microbiología , Simbiosis/fisiología , Proteínas Quinasas Dependientes de Calcio-Calmodulina/genética , Regulación de la Expresión Génica de las Plantas , Lipopolisacáridos/química , Micorrizas/crecimiento & desarrollo , Micorrizas/metabolismo , Micorrizas/fisiología , Raíces de Plantas/química , Raíces de Plantas/crecimiento & desarrollo , Raíces de Plantas/metabolismo , Plantas Modificadas Genéticamente , Populus/genética , Populus/metabolismo , Transducción de Señal
6.
Plant Biotechnol J ; 19(9): 1743-1755, 2021 09.
Artículo en Inglés | MEDLINE | ID: mdl-33774917

RESUMEN

Eucalyptus is among the most widely planted taxa of forest trees worldwide. However, its spread as an exotic or genetically engineered form can create ecological and social problems. To mitigate gene flow via pollen and seeds, we mutated the Eucalyptus orthologue of LEAFY (LFY) by transforming a Eucalyptus grandis × urophylla wild-type hybrid and two Flowering Locus T (FT) overexpressing (and flowering) lines with CRISPR Cas9 targeting its LFY orthologue, ELFY. We achieved high rates of elfy biallelic knockouts, often approaching 100% of transgene insertion events. Frameshift mutations and deletions removing conserved amino acids caused strong floral alterations, including indeterminacy in floral development and an absence of male and female gametes. These mutants were otherwise visibly normal and did not differ statistically from transgenic controls in juvenile vegetative growth rate or leaf morphology in greenhouse trials. Genes upstream or near to ELFY in the floral development pathway were overexpressed, whereas floral organ identity genes downstream of ELFY were severely depressed. We conclude that disruption of ELFY function appears to be a useful tool for sexual containment, without causing statistically significant or large adverse effects on juvenile vegetative growth or leaf morphology.


Asunto(s)
Eucalyptus , Eucalyptus/genética , Bosques , Regulación de la Expresión Génica de las Plantas , Inflorescencia , Hojas de la Planta , Plantas Modificadas Genéticamente/genética , Árboles/genética
7.
New Phytol ; 231(1): 351-364, 2021 07.
Artículo en Inglés | MEDLINE | ID: mdl-33660260

RESUMEN

Plants transition through juvenile and adult phases of vegetative development in a process known as vegetative phase change (VPC). In poplars (genus Populus) the differences between these stages are subtle, making it difficult to determine when this transition occurs. Previous studies of VPC in poplars have relied on plants propagated in vitro, leaving the natural progression of this process unknown. We examined developmental morphology of seed-grown and in vitro derived Populus tremula × alba (clone 717-1B4), and compared the phenotype of these to transgenics with manipulated miR156 expression, the master regulator of VPC. In seed-grown plants, most traits changed from node-to-node during the first 3 months of development but remained constant after node 25. Many traits remained unchanged in clones over-expressing miR156, or were enhanced when miR156 was lowered, demonstrating their natural progression is regulated by the miR156/SPL pathway. The characteristic leaf fluttering of Populus is one of these miR156-regulated traits. Vegetative development in plants grown from culture mirrored that of seed-grown plants, allowing direct comparison between plants often used in research and those found in nature. These results provide a foundation for further research on the role of VPC in the ecology and evolution of this economically important genus.


Asunto(s)
MicroARNs , Populus , Regulación de la Expresión Génica de las Plantas , Fenotipo , Hojas de la Planta , Populus/genética
8.
New Phytol ; 232(1): 80-97, 2021 10.
Artículo en Inglés | MEDLINE | ID: mdl-34128549

RESUMEN

Trees are long-lived organisms that continuously adapt to their environments, a process in which epigenetic mechanisms are likely to play a key role. Via downregulation of the chromatin remodeler DECREASED IN DNA METHYLATION 1 (DDM1) in poplar (Populus tremula × Populus alba) RNAi lines, we examined how DNA methylation coordinates genomic and physiological responses to moderate water deficit. We compared the growth and drought response of two RNAi-ddm1 lines to wild-type (WT) trees under well-watered and water deficit/rewatering conditions, and analyzed their methylomes, transcriptomes, mobilomes and phytohormone contents in the shoot apical meristem. The RNAi-ddm1 lines were more tolerant to drought-induced cavitation but did not differ in height or stem diameter growth. About 5000 differentially methylated regions were consistently detected in both RNAi-ddm1 lines, colocalizing with 910 genes and 89 active transposable elements. Under water deficit conditions, 136 differentially expressed genes were found, including many involved in phytohormone pathways; changes in phytohormone concentrations were also detected. Finally, the combination of hypomethylation and drought led to the mobility of two transposable elements. Our findings suggest major roles for DNA methylation in regulation of genes involved in hormone-related stress responses, and the maintenance of genome integrity through repression of transposable elements.


Asunto(s)
Populus , Metilación de ADN/genética , Sequías , Regulación de la Expresión Génica de las Plantas , Meristema , Populus/genética , Interferencia de ARN
9.
Plant Physiol ; 180(4): 1788-1792, 2019 08.
Artículo en Inglés | MEDLINE | ID: mdl-31152128

RESUMEN

Root sprouts-the formation of new shoots from roots-is an important mechanism for local gene flow from poplar (Populus spp). An effective strategy to reduce root sprout formation could therefore help to ensure containment during field research and commercial deployment of poplar when grown as exotic or transgenic forms. We used a flavonoid glycosyltransferase gene promoter from Scutellaria barbata (SbUGT) to drive the expression of AtCKX2, a cytokinin oxidase from Arabidopsis that converts active to inactive cytokinins in roots of poplar. In the greenhouse, SbUGT::AtCKX2 transgenic plants exhibited a similar shoot growth habit, but had enhanced root growth and fewer root sprouts, compared to the wild-type control and transgenic events with low transgene expression in roots. Under field conditions, the transgenic trees also had similar growth habits and stem growth rates that were not statistically different from wild-type trees over 3 years. Removal of trunks generally induced high rates of root sprouting; however, in selected SbUGT::AtCKX2 transgenic poplar events there was an absence or fewer root sprouts compared to wild-type trees, consistent with the greenhouse results. Our study demonstrates that the SbUGT::AtCKX2 gene can effectively inhibit root sprouting of poplar trees under field conditions, and thus may provide a useful tool to address concerns associated with root-sprouting-mediated transgene spread.


Asunto(s)
Citocininas/metabolismo , Plantas Modificadas Genéticamente/metabolismo , Populus/metabolismo , Regulación de la Expresión Génica de las Plantas/genética , Regulación de la Expresión Génica de las Plantas/fisiología , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Plantas Modificadas Genéticamente/genética , Populus/genética , Regiones Promotoras Genéticas/genética
10.
Inorg Chem ; 59(5): 2781-2790, 2020 Mar 02.
Artículo en Inglés | MEDLINE | ID: mdl-32049510

RESUMEN

We report the synthesis and excited-state dynamics for a series of homoleptic copper(I) trifluoromethylated phenanthroline complexes with two, three, and four trifluoromethyl functional groups. Our analysis of the steady-state absorbance and emission, transient-absorption spectroscopy, and electronic-structure-theory calculations results enable in-depth analysis of the pseudo-Jahn-Teller distortion inhibition from increased steric hindrance of the trifluoromethyl functional group relative to the prototypical dimethyl phenanthroline complex. Surprisingly, our results demonstrate that the greatest degree of pseudo-Jahn-Teller distortion inhibition is achieved with trifluoromethylation of only the 2 and 9 positions by an unusual combination of steric hindrance and stabilization of a nondistorted 1MLCT manifold observed by transient kinetic lifetimes and optimized excited-state structures. The intersystem-crossing (ISC) lifetime for the 2,9-bis(trifluoromethyl)-1,10-phenanthroline Cu(I) complex is 69 ps, while the triplet excited-state lifetime and emission quantum yield are 106 ns and 4 × 10-3, respectively. Further trifluoromethylation of the phenanthroline yields a greater σ bond inductive withdrawing force on the phenanthroline nitrogens, ultimately resulting in weaker coordination to the copper. Last, the surprising success of the 2,9-bis(trifluoromethyl)-1,10-phenanthroline Cu(I) complex by adjusting both ligand sterics and electronic properties outlines a new strategy for developing long-lived Cu(I) charge-transfer complexes.

11.
New Phytol ; 222(2): 923-937, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-30565259

RESUMEN

The role of the floral homeotic gene AGAMOUS (AG) and its close homologues in development of anemophilous, unisexual catkins has not previously been studied. We transformed two RNA interference (RNAi) constructs, PTG and its matrix-attachment-region flanked version MPG, into the early-flowering female poplar clone 6K10 (Populus alba) to suppress the expression of its two duplicate AG orthologues. By early 2018, six out of 22 flowering PTG events and 11 out of 12 flowering MPG events showed modified floral phenotypes in a field trial in Oregon, USA. Flowers in catkins from modified events had 'carpel-inside-carpel' phenotypes. Complete disruption of seed production was observed in seven events, and sterile anther-like organs in 10 events. Events with strong co-suppression of both the two AG and two SEEDSTICK (STK) paralogues lacked both seeds and associated seed hairs. Alterations in all of the modified floral phenotypes were stable over 4 yr of study. Trees from floral-modified events did not differ significantly (P < 0.05) from nonmodified transgenic or nontransgenic controls in biomass growth or leaf morphology. AG and STK genes show strong conservation of gene function during poplar catkin development and are promising targets for genetic containment of exotic or genetically engineered trees.


Asunto(s)
Flores/anatomía & histología , Proteínas de Plantas/metabolismo , Populus/metabolismo , Interferencia de ARN , Semillas/anatomía & histología , Regulación de la Expresión Génica de las Plantas , Hojas de la Planta/anatomía & histología , Proteínas de Plantas/genética , Plantas Modificadas Genéticamente , Populus/anatomía & histología , Populus/genética , Populus/crecimiento & desarrollo , ARN Mensajero/genética , ARN Mensajero/metabolismo , Árboles/crecimiento & desarrollo
12.
New Phytol ; 223(1): 293-309, 2019 07.
Artículo en Inglés | MEDLINE | ID: mdl-30843213

RESUMEN

Genome-wide association studies (GWAS) have great promise for identifying the loci that contribute to adaptive variation, but the complex genetic architecture of many quantitative traits presents a substantial challenge. We measured 14 morphological and physiological traits and identified single nucleotide polymorphism (SNP)-phenotype associations in a Populus trichocarpa population distributed from California, USA to British Columbia, Canada. We used whole-genome resequencing data of 882 trees with more than 6.78 million SNPs, coupled with multitrait association to detect polymorphisms with potentially pleiotropic effects. Candidate genes were validated with functional data. Broad-sense heritability (H2 ) ranged from 0.30 to 0.56 for morphological traits and 0.08 to 0.36 for physiological traits. In total, 4 and 20 gene models were detected using the single-trait and multitrait association methods, respectively. Several of these associations were corroborated by additional lines of evidence, including co-expression networks, metabolite analyses, and direct confirmation of gene function through RNAi. Multitrait association identified many more significant associations than single-trait association, potentially revealing pleiotropic effects of individual genes. This approach can be particularly useful for challenging physiological traits such as water-use efficiency or complex traits such as leaf morphology, for which we were able to identify credible candidate genes by combining multitrait association with gene co-expression and co-methylation data.


Asunto(s)
Estudio de Asociación del Genoma Completo , Polimorfismo de Nucleótido Simple/genética , Populus/genética , Populus/fisiología , Carácter Cuantitativo Heredable , Regulación hacia Abajo , Redes Reguladoras de Genes , Genes de Plantas , Genotipo , Geografía , Patrón de Herencia/genética , Análisis Multivariante , Estomas de Plantas/fisiología , Populus/anatomía & histología , Análisis de Componente Principal
13.
Chemistry ; 25(59): 13547-13565, 2019 Oct 22.
Artículo en Inglés | MEDLINE | ID: mdl-31381207

RESUMEN

A solution, solid-state, and computational study is reported of polycyclic aromatic hydrocarbon PAH/PAH(CF3 )n donor/acceptor (D/A) charge-transfer complexes that involve six PAH(CF3 )n acceptors with known gas-phase electron affinities that range from 2.11(2) to 2.805(15) eV and four PAH donors, including seven CT co-crystal X-ray structures that exhibit hexagonal arrays of mixed π-stacks with 1/1, 1/2, or 2/1 D/A stoichiometries (PAH=anthracene, azulene, coronene, perylene, pyrene, triphenylene; n=5, 6). These are the first D/A CT complexes with PAH(CF3 )n acceptors to be studied in detail. The nine D/A combinations were chosen to allow several structural and electronic comparisons to be made, providing new insights about controlling D/A interactions and the structures of CT co-crystals. The comparisons include, among others, CT complexes of the same PAH(CF3 )n acceptor with four PAH donors and CT complexes of the same donor with four PAH(CF3 )n acceptors. All nine CT complexes exhibit charge-transfer bands in solution with λmax between 467 and 600 nm. A plot of E(λmax ) versus [IE(donor)-EA(acceptor)] for the nine CT complexes studied is linear with a slope of 0.72±0.03 eV eV-1 . This plot is the first of its kind for CT complexes with structurally related donors and acceptors for which precise experimental gas-phase IEs and EAs are known. It demonstrates that conclusions based on the common assumption that the slope of a CT E(λmax ) versus [IE-EA] plot is unity may be incorrect in at least some cases and should be reconsidered.

14.
Inorg Chem ; 58(21): 14900-14911, 2019 Nov 04.
Artículo en Inglés | MEDLINE | ID: mdl-31617354

RESUMEN

FTIR spectra of microcrystalline samples of 11 metal ion salt hydrates of a variety of weakly coordinating fluoroanions are reported. The compounds studied were Li(H2O)4(Al(OC(CF3)3)4), Li(H2O)(B(3,5-C6H3(CF3)2)4), Li(H2O)n(Ga(C2F5)4), Li(H2O)(PF6), Li2(H2O)2(TiF6), Li2(H2O)4(B12F12), Na(H2O)(PF6), Na2(H2O)2(B12F12), K2(H2O)2(B12F12), Rb2(H2O)2(B12F12), Cs2(H2O)(B12F12), and their partially or completely deuterated isotopologs and isotopomers. The O-D···F hydrogen bonds in Li(HOD)(H2O)3(Al(OC(CF3)3)4) (ν(OD) = 2706 cm-1), Li(HOD)(B(3,5-C6H3(CF3)2)4) (ν(OD) = 2705 cm-1), and Li(HOD)(H2O)n(Ga(C2F5)4) (ν(OD) = 2697 cm-1) rival HOD absorbed in polyvinylidene difluoride (ν(OD) = 2696 cm-1) and HOD···FCH3 in a frozen Ar matrix (ν(OD) = 2685 cm-1) for the weakest hydrogen bonds between a water molecule and an F atom in any compound. As weak as they are, minor differences in O-H···F hydrogen bonds in the same fluoroanion salt can be distinguished spectroscopically. Uncoupled HOD molecules in asymmetric F···HOD···F' hydrogen bonding environments in Rb+, Cs+, Mg2+, and Co2+ hydrates of B12F122- gave rise to two observable ν(OD) bands even though the two R(O···F) distances differ by only 0.010(4) Å (Mg2+), 0.033(2) Å (Co2+), 0.074(4) Å (Rb+), and 0.106(6) Å (Cs+). A plot of ν(OD) for hydrates with a single uncoupled HOD molecule per metal ion (e.g., Li(HOD)(H2O)3(Al(OC(CF3)3)4)) vs R(O···F) distance from single-crystal X-ray or neutron diffraction structures was prepared. The ν(OD) values range from 2305 to 2706 cm-1 and the R(O···F) distances range from 2.58 to 3.17 Å. The plot consists of 53 {ν(OD), R(O···F)} data points, 23 of which are new and have ν(OD) > 2600 cm-1, in contrast to a 1994 ν(OD) vs R(O···F) plot with 28 data points, none of which had ν(OD) > 2600 cm-1. There is a clear and significant difference between the new ν(OD) vs R(O···F) plot and a literature ν(OD) vs R(O···O) plot for hydrates containing O-D···O hydrogen bonds. For a given ν(OD) stretching frequency, the exponential regression curves show that R(O···F) is typically 0.1-0.2 Å shorter than R(O···O), in harmony with the lower basicity and smaller size of F atoms vs O atoms.

15.
J Phys Chem A ; 123(45): 9781-9790, 2019 Nov 14.
Artículo en Inglés | MEDLINE | ID: mdl-31644288

RESUMEN

Room-temperature-attenuated total reflection-Fourier transform infrared (FTIR) spectra of the structurally characterized crystalline lithium salt Li2(H2O)4(B12F12), which contains a cyclic S4 symmetry (H2O)4 cluster, and several partially or completely deuterated isotopologs, suggest the following conclusions: (i) B and E normal modes gave rise to two distinguishable ν(OHbound) bands, separated by 42 cm-1, two distinguishable ν(OHfree) bands, separated by 13 cm-1, and two distinguishable δ(HOH) bands, separated by 19 cm-1, in the FTIR spectrum of Li2(H2O)4(B12F12); (ii) B and E normal modes gave rise to two distinguishable ν(ODbound) bands separated by 20 cm-1 in the FTIR spectrum of Li2(D2O)4(B12F12); (iii) coupling between ν(OHbound) and ν(OHfree) normal modes or between ν(ODbound) and ν(ODfree) normal modes is weak, but finite, and resulted in shifts of 4-10 cm-1 for the respective bands in the spectra of Li2(H2O)4(B12F12) vs Li2(HOD)(D2O)3(B12F12) or in the spectra of Li2(D2O)4(B12F12) vs Li2(HOD)(H2O)3(B12F12); and (iv) a δ(DOD) band for an S4 (D2O)4 cluster, at ca. 1202 cm-1, was observed for the first time. In addition, FTIR spectra of the lithium salt containing cyclic [(HOD)(H2O)3] or [(HOD)(D2O)3] clusters are the first examples in which bands that are unambiguously assigned to both HO-D···O and DO-H···O hydrogen bonds in the same sample have been observed for a water tetramer.

16.
Chemistry ; 24(6): 1441-1447, 2018 Jan 26.
Artículo en Inglés | MEDLINE | ID: mdl-29178382

RESUMEN

Two series of aromatic compounds with perfluoroalkyl (RF ) groups of increasing length, 1,3,5,7-naphthalene(RF )4 and 1,3,5,7,9-corannulene(RF )5 , have been prepared and their electronic properties studied by low-temperature photoelectron spectroscopy (PES) (for gas-phase electron affinity measurements). These and many related compounds were also studied by DFT calculations. The data demonstrate unambiguously that the electron-withdrawing ability of RF substituents increases significantly and uniformly from CF3 to C2 F5 to n-C3 F7 to n-C4 F9 .

17.
Inorg Chem ; 57(23): 14983-15000, 2018 Dec 03.
Artículo en Inglés | MEDLINE | ID: mdl-30444604

RESUMEN

Eight M(H2O) n(Z) salt hydrates were characterized by single-crystal X-ray diffraction (Z2- = B12F122-): M = Ca, Sr, n = 7; M = Mg, Co, Ni, Zn, n = 6; M = Ba, n = 4, 5. Weak O-H···F hydrogen bonding between the M(H2O) n2+ cations and Z2- resulted in room-temperature Fourier transform infrared (FTIR) spectra having sharp ν(OH) bands, with full widths at half max of 10-30 cm-1, which are much more narrow than ν(OH) bands in room temperature FTIR spectra of most salt hydrates. Clearly resolved νasym(OH/OD) and νsym(OH/OD) bands with Δν(OH) as small as 17 cm-1 and Δν(OD) as small as 11 cm-1 were observed (Δν(OX) = νasym(OX) - νsym(OX)). The isomorphic hexahydrates ( R3̅) have two fac-(H2O)3 sets of H2O ligands and nearly octahedral coordination spheres. They exhibited four resolvable ν(OH) bands, one νasym(OH)/νsym(OH) pair for H2O ligands with longer O(H)···F distances and one νasym(OH)/νsym(OH) pair for H2O ligands with shorter O(H)···F distances. The ν(OH) bands for the three H2O molecules with shorter, slightly stronger O(H)···F hydrogen bonds were broader, more intense, and red-shifted by ca. 25 cm-1 relative to the bands for the three other H2O molecules, the first time that such small differences in relatively weak O(H)···F hydrogen bonds in the same crystalline hexahydrate have resulted in observable IR spectroscopic differences at room temperature. For the first time room temperature ν(OH) values for salt hexahydrates showed the monotonic progression Mg2+ > Co2+ > Ni2+ > Zn2+, essentially the same progression as the p Ka values for these metal ions in aqueous solution. A further manifestation of the weak O-H···F hydrogen bonding in these hydrates is the latent porosity exhibited by Ba(H2O)5,8(Z), Sr(H2O) n,m(Z), and Ca(H2O)4,6(Z). Finally, the H2O/D2O exchange reaction Co(D2O)6(Z) → Co(H2O)6(Z) was ca. 50% complete in 1 h at 50 °C in N2/17 Torr H2O( g).

18.
New Phytol ; 213(3): 1000-1021, 2017 Feb.
Artículo en Inglés | MEDLINE | ID: mdl-28079940

RESUMEN

1000 I. 1000 II. 1001 III. 1014 IV. 1015 V. 1016 1016 References 1016 SUMMARY: Genetic engineering (GE) can be used to improve forest plantation productivity and tolerance of biotic and abiotic stresses. However, gene flow from GE forest plantations is a large source of ecological, social and legal controversy. The use of genetic technologies to mitigate or prevent gene flow has been discussed widely and should be technically feasible in a variety of plantation taxa. However, potential ecological effects of such modifications, and their social acceptability, are not well understood. Focusing on Eucalyptus, Pinus, Populus and Pseudotsuga - genera that represent diverse modes of pollination and seed dispersal - we conducted in-depth reviews of ecological processes associated with reproductive tissues. We also explored potential impacts of various forms of reproductive modification at stand and landscape levels, and means for mitigating impacts. We found little research on potential reactions by the public and other stakeholders to reproductive modification in forest plantations. However, there is considerable research on related areas that suggest key dimensions of concern and support. We provide detailed suggestions for research to understand the biological and social dimensions of containment technologies, and consider the role of regulatory and market restrictions that obstruct necessary ecological and genetic research.


Asunto(s)
Biodiversidad , Bosques , Sociedades , Animales , Conducta Alimentaria , Ingeniería Genética , Reproducción
19.
Inorg Chem ; 56(7): 4072-4083, 2017 Apr 03.
Artículo en Inglés | MEDLINE | ID: mdl-28333460

RESUMEN

The single-crystal X-ray structures, thermogravimetric analyses, and/or FTIR spectra of a series of salts of the B12F122- anion and homoleptic Ag(L)n+ cations are reported (L = CH2Cl2, n = 2; L = PhCH3, n = 3; L = CH3CN; n = 2-4; L = CO, n = 1, 2). The superweak-anion nature of B12F122- (Y2-) was demonstrated by the rapid reaction of microcrystalline Ag2(Y) with 1 atm of CO to form a nonclassical silver(I) carbonyl compound with an FTIR ν(CO) band at 2198 cm-1 (and with the proposed formula [Ag(CO)n]2[Y]). In contrast, microcrystalline Ag2(B12Cl12) did not exhibit ν(CO) bands and therefore did not form Ag(CO)+ species, even after 32 h under 24 atm of CO. When Ag2(Y) was treated with carbon monoxide pressures higher than 1 atm, a new ν(CO) band at 2190 cm-1 appeared, which is characteristic of a Ag(CO)2+ dicarbonyl cation. Both Ag2(CH3CN)8(Y) and Ag2(CH3CN)5(Y) rapidly lost coordinated CH3CN at 25 °C to form Ag2(CH3CN)4(Y), which formed solvent-free Ag2(Y) only after heating above 100 °C. Similarly, Ag2(PhCH3)6(Y) rapidly lost coordinated PhCH3 at 25 °C to form Ag2(PhCH3)2(Y), which formed Ag2(Y) after heating above 150 °C, and Ag2(CH2Cl2)4(Y) rapidly lost three of the four coordinated CH2Cl2 ligands between 25 and 100 °C and formed Ag2(Y) when it was heated above 200 °C. Solvent-free Ag2(Y) was stable until it was heated above 380 °C. The rapid evaporative loss of coordinated ligands at 25 °C from nonporous crystalline solids requires equally rapid structural reorganization of the lattice and is one of three manifestations of the structural compliance of the Y2- anion reported in this work. The second, more quantitative, manifestation is that Ag+ bond-valence sums for Ag2(CH3CN)n(Y) are virtually constant, 1.20 ± 0.03, for n = 8, 5, 4, because the Y2- anion precisely compensated for the lost CH3CN ligands by readily forming the necessary number of weak Ag-F(B) bonds. The third, and most exceptional, manifestation is that the idealized structural reorganization accompanying the conceptual transformations Ag2(CH3CN)8(Y) → Ag2(CH3CN)5(Y) → Ag2(CH3CN)4(Y) involve close-packed layers of Y2- anions that sandwich the Ag(CH3CN)4+ complexes splitting into staggered flat ribbons of interconnected (Y2-)3 triangles that surround the Ag2(CH3CN)52+ complexes on four sides, conceptually re-forming close-packed layers of anions that sandwich the Ag(CH3CN)2+ complexes. The interconnected (Y2-)3 triangle lattice of anions in Ag2(CH3CN)5(Y) may be the first example of this structure type.

20.
Inorg Chem ; 56(8): 4369-4379, 2017 Apr 17.
Artículo en Inglés | MEDLINE | ID: mdl-28383911

RESUMEN

The synthesis of high-purity Na2B12F12 and the crystal structures of Na2(B12F12) (5 K neutron powder diffraction (NPD)), Na2(H2O)4(B12F12) (120 K single-crystal X-ray diffraction (SC-XRD)), Na2(B12Cl12) (5 and 295 K NPD), and Na2(H2O)6(B12Cl12) (100 K SC-XRD) are reported. The compound Na2(H2O)4(B12F12) contains {[(Na(µ-H2O)2Na(µ-H2O)2)]2+}∞ infinite chains; the compound Na2(H2O)6(B12Cl12) contains discrete [(H2O)2Na(µ-H2O)2Na(H2O)2]2+ cations with OH···O hydrogen bonds linking the terminal H2O ligands. The structures of the two hydrates and the previously published structure of Na2(H2O)4(B12H12) are analyzed with respect to the relative coordinating ability of B12F122-, B12H122-, and B12Cl122- toward Na+ ions in the solid state (i.e., the relative ability of these anions to satisfy the valence of Na+). All three hydrated structures have distorted octahedral NaX2(H2O)4 coordination spheres (X = F, H, Cl). The sums of the four Na-O bond valence contributions are 71, 75, and 89% of the total bond valences for the X = F, H, and Cl hydrated compounds, respectively, demonstrating that the relative coordinating ability by this criterion is B12Cl122- ≪ B12H122- < B12F122-. Differential scanning calorimetry experiments demonstrate that Na2(B12F12) undergoes a reversible, presumably order-disorder, phase transition at ca. 560 K (287 °C), between the 529 and 730 K transition temperatures previously reported for Na2(B12H12) and Na2(B12Cl12), respectively. Thermogravimetric analysis demonstrates that Na2(H2O)4(B12F12) and Na2(H2O)6(B12Cl12) undergo partial dehydration at 25 °C to Na2(H2O)2(B12F12) and Na2(H2O)2(B12Cl12) in ca. 30 min and 2 h, respectively, and essentially complete dehydration to Na2(B12F12) and Na2(B12Cl12) within minutes at 150 and 75 °C, respectively (the remaining trace amounts of H2O, if any, were not quantified). The changes in structure upon dehydration and the different vapor pressures of H2O needed to fully hydrate the respective Na2(B12X12) compounds provide additional evidence that B12Cl122- is more weakly coordinating than B12F122- to Na+ in the solid state. Taken together, the results suggest that the anhydrous, halogenated closo-borane compounds Na2(B12F12) and Na2(B12Cl12), in appropriately modified forms, may be viable component materials for fast-ion-conducting solid electrolytes in future energy-storage devices.

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