Multiple Classification of Brain MRI Autism Spectrum Disorder by Age and Gender Using Deep Learning.

The fact that the rapid and definitive diagnosis of autism cannot be made today and that autism cannot be treated provides an impetus to look into novel technological solutions. To contribute to the resolution of this problem through multiple classifications by considering age and gender factors, in this study, two quadruple and one octal classifications were performed using a deep learning (DL) approach. Gender in one of the four classifications and age groups in the other were considered. In the octal classification, classes were created considering gender and age groups. In addition to the diagnosis of ASD (Autism Spectrum Disorders), another goal of this study is to find out the contribution of gender and age factors to the diagnosis of ASD by making multiple classifications based on age and gender for the first time. Brain structural MRI (sMRI) scans of participators with ASD and TD (Typical Development) were pre-processed in the system originally designed for this purpose. Using the Canny Edge Detection (CED) algorithm, the sMRI image data was cropped in the data pre-processing stage, and the data set was enlarged five times with the data augmentation (DA) techniques. The most optimal convolutional neural network (CNN) models were developed using the grid search optimization (GSO) algorism. The proposed DL prediction system was tested with the five-fold cross-validation technique. Three CNN models were designed to be used in the system. The first of these models is the quadruple classification model created by taking gender into account (model 1), the second is the quadruple classification model created by taking into account age (model 2), and the third is the eightfold classification model created by taking into account both gender and age (model 3). ). The accuracy rates obtained for all three designed models are 80.94, 85.42 and 67.94, respectively. These obtained accuracy rates were compared with pre-trained models by using the transfer learning approach. As a result, it was revealed that age and gender factors were effective in the diagnosis of ASD with the system developed for ASD multiple classifications, and higher accuracy rates were achieved compared to pre-trained models.

Detection of Epileptic Seizure Using Pretrained Deep Convolutional Neural Network and Transfer Learning.

INTRODUCTION: The diagnosis of epilepsy takes a certain process, depending entirely on the attending physician. However, the human factor may cause erroneous diagnosis in the analysis of the EEG signal. In the past 2 decades, many advanced signal processing and machine learning methods have been developed for the detection of epileptic seizures. However, many of these methods require large data sets and complex operations. METHODS: In this study, an end-to-end machine learning model is presented for detection of epileptic seizure using the pretrained deep two-dimensional convolutional neural network (CNN) and the concept of transfer learning. The EEG signal is converted directly into visual data with a spectrogram and used directly as input data. RESULTS: The authors analyzed the results of the training of the proposed pretrained AlexNet CNN model. Both binary and ternary classifications were performed without any extra procedure such as feature extraction. By performing data set creation from short-term spectrogram graphic images, the authors were able to achieve 100% accuracy for binary classification for epileptic seizure detection and 100% for ternary classification. DISCUSSION/CONCLUSION: The proposed automatic identification and classification model can help in the early diagnosis of epilepsy, thus providing the opportunity for effective early treatment.

A Novel Method for Sleep-Stage Classification Based on Sonification of Sleep Electroencephalogram Signals Using Wavelet Transform and Recurrent Neural Network.

INTRODUCTION: Visual sleep-stage scoring is a time-consuming technique that cannot extract the nonlinear characteristics of electroencephalogram (EEG). This article presents a novel method for sleep-stage differentiation based on sonification of sleep-EEG signals using wavelet transform and recurrent neural network (RNN). METHODS: Two RNNs were designed and trained separately based on a database of classical guitar pieces and Kurdish tanbur Makams using a long short-term memory model. Moreover, discrete wavelet transform and wavelet packet decomposition were used to determine the association between the EEG signals and musical pitches. Continuous wavelet transform was applied to extract musical beat-based features from the EEG. Then, the pretrained RNN was used to generate music. To test the proposed model, 11 sleep EEGs were mapped onto the guitar and tanbur frequency intervals and presented to the pretrained RNN. Next, the generated music was randomly presented to 2 neurologists. RESULTS: The proposed model classified the sleep stages with an accuracy of >81% for tanbur and more than 93% for guitar musical pieces. The inter-rater reliability measured by Cohen's kappa coefficient (κ) revealed good reliability for both tanbur (κ = 0.64, p < 0.001) and guitar musical pieces (κ = 0.85, p < 0.001). CONCLUSION: The present EEG sonification method leads to valid sleep staging by clinicians. The method could be used on various EEG databases for classification, differentiation, diagnosis, and treatment purposes. Real-time EEG sonification can be used as a feedback tool for replanning of neurophysiological functions for the management of many neurological and psychiatric disorders in the future.

Upper Limb Movement Classification Via Electromyographic Signals and an Enhanced Probabilistic Network.

Few studies in the literature have researched the use of surface electromyography (sEMG) for motor assessment post-stroke due to the complexity of this type of signal. However, recent advances in signal processing and machine learning have provided fresh opportunities for analyzing complex, non-linear, non-stationary signals, such as sEMG. This paper presents a method for identification of the upper limb movements from sEMG signals using a combination of digital signal processing, that is discrete wavelet transform, and the enhanced probabilistic neural network (EPNN). To explore the potential of sEMG signals for monitoring motor rehabilitation progress, this study used sEMG signals from a subset of movements of the Arm Motor Ability Test (AMAT) as inputs into a movement classification algorithm. The importance of a particular frequency domain feature, that is the ratio of the mean absolute values between sub-bands, was discovered in this work. An average classification accuracy of 75.5% was achieved using the proposed approach with a maximum accuracy of 100%. The performance of the proposed method was compared with results obtained using three other classification algorithms: support vector machine (SVM), k-Nearest Neighbors (k-NN), and probabilistic neural network (PNN) in terms of sEMG movement classification. The study demonstrated the capability of using upper limb sEMG signals to identify and distinguish between functional movements used in standard upper limb motor assessments for stroke patients. The classification algorithm used in the proposed method, EPNN, outperformed SVM, k-NN, and PNN.

Artificial Intelligence Techniques for Automated Diagnosis of Neurological Disorders.

BACKGROUND: Authors have been advocating the research ideology that a computer-aided diagnosis (CAD) system trained using lots of patient data and physiological signals and images based on adroit integration of advanced signal processing and artificial intelligence (AI)/machine learning techniques in an automated fashion can assist neurologists, neurosurgeons, radiologists, and other medical providers to make better clinical decisions. SUMMARY: This paper presents a state-of-the-art review of research on automated diagnosis of 5 neurological disorders in the past 2 decades using AI techniques: epilepsy, Parkinson's disease, Alzheimer's disease, multiple sclerosis, and ischemic brain stroke using physiological signals and images. Recent research articles on different feature extraction methods, dimensionality reduction techniques, feature selection, and classification techniques are reviewed. Key Message: CAD systems using AI and advanced signal processing techniques can assist clinicians in analyzing and interpreting physiological signals and images more effectively.

Automated seizure prediction.

In the past two decades, significant advances have been made on automated electroencephalogram (EEG)-based diagnosis of epilepsy and seizure detection. A number of innovative algorithms have been introduced that can aid in epilepsy diagnosis with a high degree of accuracy. In recent years, the frontiers of computational epilepsy research have moved to seizure prediction, a more challenging problem. While antiepileptic medication can result in complete seizure freedom in many patients with epilepsy, up to one-third of patients living with epilepsy will have medically intractable epilepsy, where medications reduce seizure frequency but do not completely control seizures. If a seizure can be predicted prior to its clinical manifestation, then there is potential for abortive treatment to be given, either self-administered or via an implanted device administering medication or electrical stimulation. This will have a far-reaching impact on the treatment of epilepsy and patient's quality of life. This paper presents a state-of-the-art review of recent efforts and journal articles on seizure prediction. The technologies developed for epilepsy diagnosis and seizure detection are being adapted and extended for seizure prediction. The paper ends with some novel ideas for seizure prediction using the increasingly ubiquitous machine learning technology, particularly deep neural network machine learning.

A Novel Wavelet Transform-Homogeneity Model for Sudden Cardiac Death Prediction Using ECG Signals.

Sudden cardiac death (SCD) is one of the main causes of death among people. A new methodology is presented for predicting the SCD based on ECG signals employing the wavelet packet transform (WPT), a signal processing technique, homogeneity index (HI), a nonlinear measurement for time series signals, and the Enhanced Probabilistic Neural Network classification algorithm. The effectiveness and usefulness of the proposed method is evaluated using a database of measured ECG data acquired from 20 SCD and 18 normal patients. The proposed methodology presents the following significant advantages: (1) compared with previous works, the proposed methodology achieves a higher accuracy using a single nonlinear feature, HI, thus requiring low computational resource for predicting an SCD onset in real-time, unlike other methodologies proposed in the literature where a large number of nonlinear features are used to predict an SCD event; (2) it is capable of predicting the risk of developing an SCD event up to 20 min prior to the onset with a high accuracy of 95.8%, superseding the prior 12 min prediction time reported recently, and (3) it uses the ECG signal directly without the need for transforming the signal to a heart rate variability signal, thus saving time in the processing.

A Novel Methodology for Extracting and Evaluating Therapeutic Movements in Game-Based Motion Capture Rehabilitation Systems.

Virtual rehabilitation yields outcomes that are at least as good as traditional care for improving upper limb function and the capacity to carry out activities of daily living. Due to the advent of low-cost gaming systems and patient preference for game-based therapies, video game technology will likely be increasingly utilized in physical therapy practice in the coming years. Gaming systems that incorporate low-cost motion capture technology often generate large datasets of therapeutic movements performed over the course of rehabilitation. An infrastructure has yet to be established, however, to enable efficient processing of large quantities of movement data that are collected outside of a controlled laboratory setting. In this paper, a methodology is presented for extracting and evaluating therapeutic movements from game-based rehabilitation that occurs in uncontrolled and unmonitored settings. By overcoming these challenges, meaningful kinematic analysis of rehabilitation trajectory within an individual becomes feasible. Moreover, this methodological approach provides a vehicle for analyzing large datasets generated in uncontrolled clinical settings to enable better predictions of rehabilitation potential and dose-response relationships for personalized medicine.

Clinical Neurophysiological and Automated EEG-Based Diagnosis of the Alzheimer's Disease.

Alzheimer's disease (AD) is a progressive disorder affecting intellectual, behavioral and functional abilities. It is associated with age and pathological alterations leading to the formation of amyloid plaques and tangles. It is the most common source of dementia in the older population, which varies in its degrees of severity. We are yet to find efficient methods of diagnosis of AD, as its symptoms vary among individuals. This paper presents a review of recent research on the clinical neurophysiological and automated electroencephalography-based diagnosis of the AD. Various therapeutic measures are also discussed briefly.

Computer-Aided Diagnosis of Depression Using EEG Signals.

The complex, nonlinear and non-stationary electroencephalogram (EEG) signals are very tedious to interpret visually and highly difficult to extract the significant features from them. The linear and nonlinear methods are effective in identifying the changes in EEG signals for the detection of depression. Linear methods do not exhibit the complex dynamical variations in the EEG signals. Hence, chaos theory and nonlinear dynamic methods are widely used in extracting the EEG signal features for computer-aided diagnosis (CAD) of depression. Hence, this article presents the recent efforts on CAD of depression using EEG signals with a focus on using nonlinear methods. Such a CAD system is simple to use and may be used by the clinicians as a tool to confirm their diagnosis. It should be of a particular value to enable the early detection of depression.

Nonlinear Dynamics Measures for Automated EEG-Based Sleep Stage Detection.

BACKGROUND: The brain's continuous neural activity during sleep can be monitored by electroencephalogram (EEG) signals. The EEG wave pattern and frequency vary during five stages of sleep. These subtle variations in sleep EEG signals cannot be easily detected through visual inspection. SUMMARY: A range of time, frequency, time-frequency and nonlinear analysis methods can be applied to understand the complex physiological signals and their chaotic behavior. This paper presents a comprehensive comparative review and analysis of 29 nonlinear dynamics measures for EEG-based sleep stage detection. KEY MESSAGES: The characteristic ranges of these features are reported for the five different sleep stages. All nonlinear measures produce clinically significant results, that is, they can discriminate the individual sleep stages. Feature ranking based on the statistical F-value, however, shows that the third order cumulant of higher order spectra yields the most discriminative result. The distinct value ranges for each sleep stage and the discriminative power of the features can be used for sleep disorder diagnosis, treatment monitoring, and drug efficacy assessment.

A Novel Depression Diagnosis Index Using Nonlinear Features in EEG Signals.

Depression is a mental disorder characterized by persistent occurrences of lower mood states in the affected person. The electroencephalogram (EEG) signals are highly complex, nonlinear, and nonstationary in nature. The characteristics of the signal vary with the age and mental state of the subject. The signs of abnormality may be invisible to the naked eyes. Even when they are visible, deciphering the minute changes indicating abnormality is tedious and time consuming for the clinicians. This paper presents a novel method for automated EEG-based diagnosis of depression using nonlinear methods: fractal dimension, largest Lyapunov exponent, sample entropy, detrended fluctuation analysis, Hurst's exponent, higher order spectra, and recurrence quantification analysis. A novel Depression Diagnosis Index (DDI) is presented through judicious combination of the nonlinear features. The DDI calculated automatically based on the EEG recordings can be used to diagnose depression objectively using just one numeric value. Also, these features extracted from nonlinear methods are ranked using the t value and fed to the support vector machine (SVM) classifier. The SVM classifier yielded the highest classification performance with an average accuracy of about 98%, sensitivity of about 97%, and specificity of about 98.5%.

Computer-Aided Diagnosis of Parkinson's Disease Using Enhanced Probabilistic Neural Network.

Early and accurate diagnosis of Parkinson's disease (PD) remains challenging. Neuropathological studies using brain bank specimens have estimated that a large percentages of clinical diagnoses of PD may be incorrect especially in the early stages. In this paper, a comprehensive computer model is presented for the diagnosis of PD based on motor, non-motor, and neuroimaging features using the recently-developed enhanced probabilistic neural network (EPNN). The model is tested for differentiating PD patients from those with scans without evidence of dopaminergic deficit (SWEDDs) using the Parkinson's Progression Markers Initiative (PPMI) database, an observational, multi-center study designed to identify PD biomarkers for diagnosis and disease progression. The results are compared to four other commonly-used machine learning algorithms: the probabilistic neural network (PNN), support vector machine (SVM), k-nearest neighbors (k-NN) algorithm, and classification tree (CT). The EPNN had the highest classification accuracy at 92.5% followed by the PNN (91.6%), k-NN (90.8%) and CT (90.2%). The EPNN exhibited an accuracy of 98.6% when classifying healthy control (HC) versus PD, higher than any previous studies.

Autism: cause factors, early diagnosis and therapies.

Autism spectrum disorder (ASD) is a complex neurobiological disorder characterized by neuropsychological and behavioral deficits. Cognitive impairment, lack of social skills, and stereotyped behavior are the major autistic symptoms, visible after a certain age. It is one of the fastest growing disabilities. Its current prevalence rate in the U.S. estimated by the Centers for Disease Control and Prevention is 1 in 68 births. The genetic and physiological structure of the brain is studied to determine the pathology of autism, but diagnosis of autism at an early age is challenging due to the existing phenotypic and etiological heterogeneity among ASD individuals. Volumetric and neuroimaging techniques are explored to elucidate the neuroanatomy of the ASD brain. Nuroanatomical, neurochemical, and neuroimaging biomarkers can help in the early diagnosis and treatment of ASD. This paper presents a review of the types of autism, etiologies, early detection, and treatment of ASD.

Automated diagnosis of autism: in search of a mathematical marker.

Autism is a type of neurodevelopmental disorder affecting the memory, behavior, emotion, learning ability, and communication of an individual. An early detection of the abnormality, due to irregular processing in the brain, can be achieved using electroencephalograms (EEG). The variations in the EEG signals cannot be deciphered by mere visual inspection. Computer-aided diagnostic tools can be used to recognize the subtle and invisible information present in the irregular EEG pattern and diagnose autism. This paper presents a state-of-the-art review of automated EEG-based diagnosis of autism. Various time domain, frequency domain, time-frequency domain, and nonlinear dynamics for the analysis of autistic EEG signals are described briefly. A focus of the review is the use of nonlinear dynamics and chaos theory to discover the mathematical biomarkers for the diagnosis of the autism analogous to biological markers. A combination of the time-frequency and nonlinear dynamic analysis is the most effective approach to characterize the nonstationary and chaotic physiological signals for the automated EEG-based diagnosis of autism spectrum disorder (ASD). The features extracted using these nonlinear methods can be used as mathematical markers to detect the early stage of autism and aid the clinicians in their diagnosis. This will expedite the administration of appropriate therapies to treat the disorder.

Computer-aided diagnosis of alcoholism-related EEG signals.

Alcoholism is a severe disorder that affects the functionality of neurons in the central nervous system (CNS) and alters the behavior of the affected person. Electroencephalogram (EEG) signals can be used as a diagnostic tool in the evaluation of subjects with alcoholism. The neurophysiological interpretation of EEG signals in persons with alcoholism (PWA) is based on observation and interpretation of the frequency and power in their EEGs compared to EEG signals from persons without alcoholism. This paper presents a review of the known features of EEGs obtained from PWA and proposes that the impact of alcoholism on the brain can be determined by computer-aided analysis of EEGs through extracting the minute variations in the EEG signals that can differentiate the EEGs of PWA from those of nonaffected persons. The authors advance the idea of automated computer-aided diagnosis (CAD) of alcoholism by employing the EEG signals. This is achieved through judicious combination of signal processing techniques such as wavelet, nonlinear dynamics, and chaos theory and pattern recognition and classification techniques. A CAD system is cost-effective and efficient and can be used as a decision support system by physicians in the diagnosis and treatment of alcoholism especially those who do not specialize in alcoholism or neurophysiology. It can also be of great value to rehabilitation centers to assess PWA over time and to monitor the impact of treatment aimed at minimizing or reversing the effects of the disease on the brain. A CAD system can be used to determine the extent of alcoholism-related changes in EEG signals (low, medium, high) and the effectiveness of therapeutic plans.

EEG/MEG- and imaging-based diagnosis of Alzheimer's disease.

In recent years, researchers have embarked on a search of computer-aided methods for diagnosis of the Alzheimer's disease (AD) to help clinicians make the diagnosis earlier and more accurately such that treatment of the disease can begin sooner when there is a higher chance of success in slowing down the progression of this disease. This article presents a review of journal articles on brain signal- and image-based diagnosis of AD published in the past few years. The areas of signal processing, electroencephalogram and magnetoencephalogram are considered. In the area of image analysis, the following modalities are reviewed: magnetic resonance imaging (MRI), functional MRI, diffusion tensor MRI, and structural MRI. Computer-aided early diagnosis of the AD would be a major breakthrough with a very significant worldwide impact because medications would be able to slow down the progression of the disease. This review shows that this is a very active area in the frontier of brain research, with many multidisciplinary researchers exploring a variety of approaches using various types of brain signals and imaging technologies. The brain signal-based approaches will be able to point toward early onset diagnosis of the AD, but as the disease progresses, a multimodal approach can increase the accuracy of the diagnosis.

Brain-computer interface technologies: from signal to action.

Here, we present a state-of-the-art review of the research performed on the brain-computer interface (BCI) technologies with a focus on signal processing approaches. BCI can be divided into three main components: signal acquisition, signal processing, and effector device. The signal acquisition component is generally divided into two categories: noninvasive and invasive. For noninvasive, this review focuses on electroencephalogram. For the invasive, the review includes electrocorticography, local field potentials, multiple-unit activity, and single-unit action potentials. Signal processing techniques reviewed are divided into time-frequency methods such as Fourier transform, autoregressive models, wavelets, and Kalman filter and spatiotemporal techniques such as Laplacian filter and common spatial patterns. Additionally, various signal feature classification algorithms are discussed such as linear discriminant analysis, support vector machines, artificial neural networks, and Bayesian classifiers. The article ends with a discussion of challenges facing BCI and concluding remarks on the future of the technology.

AutoEncoder Filter Bank Common Spatial Patterns to Decode Motor Imagery From EEG.

The present paper introduces a novel method, named AutoEncoder-Filter Bank Common Spatial Patterns (AE-FBCSP), to decode imagined movements from electroencephalography (EEG). AE-FBCSP is an extension of the well-established FBCSP and is based on a global (cross-subject) and subsequent transfer learning subject-specific (intra-subject) approach. A multi-way extension of AE-FBCSP is also introduced in this paper. Features are extracted from high-density EEG (64 electrodes), by means of FBCSP, and used to train a custom AE, in an unsupervised way, to project the features into a compressed latent space. Latent features are used to train a supervised classifier (feed forward neural network) to decode the imagined movement. The proposed method was tested using a public dataset of EEGs collected from 109 subjects. The dataset consists of right-hand, left-hand, both hands, both feet motor imagery and resting EEGs. AE-FBCSP was extensively tested in the 3-way classification (right hand vs left hand vs resting) and also in the 2-way, 4-way and 5-way ones, both in cross- and intra-subject analysis. AE-FBCSP outperformed standard FBCSP in a statistically significant way (p > 0.05) and achieved a subject-specific average accuracy of 89.09% in the 3-way classification. The proposed methodology performed subject-specific classification better than other comparable methods in the literature, applied to the same dataset, also in the 2-way, 4-way and 5-way tasks. One of the most interesting outcomes is that AE-FBCSP remarkably increased the number of subjects that responded with a very high accuracy, which is a fundamental requirement for BCI systems to be applied in practice.

Toward automated prediction of sudden unexpected death in epilepsy.

Sudden unexpected death in epilepsy (SUDEP) is a devastating yet overlooked complication of epilepsy. The rare and complex nature of SUDEP makes it challenging to study. No prediction or prevention of SUDEP is currently available in a clinical setting. In the past decade, significant advances have been made in our knowledge of the pathophysiologic cascades that lead to SUDEP. In particular, studies of brain, heart, and respiratory functions in both human patients at the epilepsy monitoring unit and animal models during fatal seizures provide critical information to integrate computational tools for SUDEP prediction. The rapid advances in automated seizure detection and prediction algorithms provide a fundamental framework for their adaption in predicting SUDEP. If a SUDEP can be predicted, then there will be a potential for medical intervention to be administered, either by their caregivers or via an implanted device automatically delivering electrical stimulation or medication, and finally save lives from fatal seizures. This article presents recent developments of SUDEP studies focusing on the pathophysiologic basis of SUDEP and computational implications of machine learning techniques that can be adapted and extended for SUDEP prediction. This article also discusses some novel ideas for SUDEP prediction and rescue including principal component analysis and closed-loop intervention.