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1.
Environ Sci Technol ; 57(47): 18929-18939, 2023 Nov 28.
Article in English | MEDLINE | ID: mdl-37224105

ABSTRACT

Metal-based advanced oxidation processes (AOPs) with peracetic acid (PAA) have been extensively studied to degrade micropollutants (MPs) in wastewater. Mn(II) is a commonly used homogeneous metal catalyst for oxidant activation, but it performs poorly with PAA. This study identifies that the biodegradable chelating ligand picolinic acid (PICA) can significantly mediate Mn(II) activation of PAA for accelerated MP degradation. Results show that, while Mn(II) alone has minimal reactivity toward PAA, the presence of PICA accelerates PAA loss by Mn(II). The PAA-Mn(II)-PICA system removes various MPs (methylene blue, bisphenol A, naproxen, sulfamethoxazole, carbamazepine, and trimethoprim) rapidly at neutral pH, achieving >60% removal within 10 min in clean and wastewater matrices. Coexistent H2O2 and acetic acid in PAA play a negligible role in rapid MP degradation. In-depth evaluation with scavengers and probe compounds (tert-butyl alcohol, methanol, methyl phenyl sulfoxide, and methyl phenyl sulfone) suggested that high-valent Mn species (Mn(V)) is a likely main reactive species leading to rapid MP degradation, whereas soluble Mn(III)-PICA and radicals (CH3C(O)O• and CH3C(O)OO•) are minor reactive species. This study broadens the mechanistic understanding of metal-based AOPs using PAA in combination with chelating agents and indicates the PAA-Mn(II)-PICA system as a novel AOP for wastewater treatment.


Subject(s)
Peracetic Acid , Water Pollutants, Chemical , Hydrogen Peroxide , Wastewater , Oxidation-Reduction
2.
Environ Sci Technol ; 56(16): 11683-11693, 2022 08 16.
Article in English | MEDLINE | ID: mdl-35880779

ABSTRACT

Ferrate(VI) and peracetic acid (PAA) are two oxidants of growing importance in water treatment. Recently, our group found that simultaneous application of ferrate(VI) and PAA led to much faster degradation of micropollutants compared to that by a single oxidant, and this paper systematically evaluated the underlying mechanisms. First, we used benzoic acid and methyl phenyl sulfoxide as probe compounds and concluded that Fe(IV)/Fe(V) was the main reactive species, while organic radicals [CH3C(O)O•/CH3C(O)OO•] had negligible contribution. Second, we removed the coexistent hydrogen peroxide (H2O2) in PAA stock solution with free chlorine and, to our surprise, found the second-order reaction rate constant between ferrate(VI) and PAA to be only about 1.44 ± 0.12 M-1s-1 while that of H2O2 was as high as (2.01 ± 0.12) × 101 M-1s-1 at pH 9.0. Finally, further experiments on ferrate(VI)-bisulfite and ferrate(VI)-2,2'-azino-bis(3-ethylbenzothiazoline-6-sulfonic)acid systems confirmed that PAA was not an activator for ferrate(VI). Rather, PAA could enhance the oxidation capacity of Fe(IV)/Fe(V), making their oxidation outcompete self-decay. This study, for the first time, reveals the ability of PAA to promote electron transfer efficiency between high-valent metals and organic contaminants and confirms the benefits of co-application of ferrate(VI) and PAA for alkaline wastewater treatment.


Subject(s)
Water Pollutants, Chemical , Water Purification , Electrons , Hydrogen Peroxide , Iron , Oxidants/chemistry , Oxidation-Reduction , Peracetic Acid , Water Pollutants, Chemical/chemistry
3.
Environ Sci Technol ; 56(7): 4437-4446, 2022 04 05.
Article in English | MEDLINE | ID: mdl-35319885

ABSTRACT

Activation of peracetic acid (PAA) with iron species is an emerging advanced oxidation process (AOP). This study investigates the use of the chelating agent picolinic acid (PICA) to extend the pH range and enhance the performance of the PAA-Fe(III) AOP. Compared to the PAA-Fe(III) system, the PAA-Fe(III)-PICA system degrades various micropollutants (MPs: methylene blue, naproxen, sulfamethoxazole, carbamazepine, trimethoprim, diclofenac, and bisphenol-A) much more rapidly at higher pH, achieving almost complete removal of parent compounds within 10 min. PAA significantly outperforms the coexistent H2O2 and is the key oxidant for rapid compound degradation. Other chelating agents, EDTA, NTA, citric acid, proline, and nicotinic acid, could not enhance MP degradation in the PAA-Fe(III) system, while 2,6-pyridinedicarboxylic acid with a structure similar to PICA moderately enhanced MP degradation. Experiments with scavengers (tert-butyl alcohol and methyl phenyl sulfoxide) and a probe compound (benzoic acid) confirmed that high-valent iron species [Fe(IV) and/or Fe(V)], rather than radicals, are the major reactive species contributing to MP degradation. The oxidation products of methylene blue, naproxen, and sulfamethoxazole by PAA-Fe(III)-PICA were characterized and supported the proposed mechanism. This work demonstrates that PICA is an effective complexing ligand to assist the Fenton reaction of PAA by extending the applicable pH range and accelerating the catalytic ability of Fe(III).


Subject(s)
Peracetic Acid , Water Pollutants, Chemical , Ferric Compounds , Hydrogen Peroxide , Oxidation-Reduction , Picolinic Acids
4.
Environ Sci Technol ; 56(4): 2626-2636, 2022 02 15.
Article in English | MEDLINE | ID: mdl-35119268

ABSTRACT

Activation of peroxydisulfate (PDS, S2O82-) via various catalysts to degrade pollutants in water has been extensively investigated. However, catalyst-free activation of PDS by visible light has been largely ignored. This paper reports effective visible light activation of PDS without any additional catalyst, leading to the degradation of a wide range of organic compounds of high environmental and human health concerns. Importantly, the formation of reactive species is distinctively different in the PDS visible light system with and without pollutants [e.g., atrazine (ATZ)]. In addition to SO4•- generated via S2O82- dissociation under visible light irradiation, O2•- and 1O2 are also produced in both systems. However, in the absence of ATZ, H2O2 and O2•- are key intermediates and precursors for 1O2, whereas in the presence of ATZ, a different pathway was followed to produce O2•- and 1O2. Both radical and nonradical processes contribute to the degradation of ATZ in the PDS visible light system. The active role of 1O2 in the degradation of ATZ besides SO4•- is manifested by the enhanced degradation of contaminants and electron paramagnetic resonance spectroscopy measurements in D2O.


Subject(s)
Atrazine , Environmental Pollutants , Water Pollutants, Chemical , Catalysis , Humans , Hydrogen Peroxide , Light , Oxidation-Reduction , Water Pollutants, Chemical/chemistry
5.
Phys Chem Chem Phys ; 23(36): 20583-20597, 2021 Sep 22.
Article in English | MEDLINE | ID: mdl-34505848

ABSTRACT

Small molecule organic dyes have many potential uses in medicine, textiles, forensics, and light-harvesting technology. Being able to computationally predict the spectroscopic properties of these dyes could greatly expedite screening efforts, saving time and materials. Time-dependent density functional theory (TD-DFT) has been shown to be a good tool for this in many instances, but characterizing electronic excitations with charge-transfer (CT) character has historically been challenging and can be highly sensitive to the chosen exchange-correlation functional. Here we present a combined experimental and computational study of the excited-state electronic structure of twenty organic dyes obtained from the Max Weaver Dye Library at NCSU. Results of UV-vis spectra calculations on these dyes with six different exchange-correlation functionals, BP86, B3LYP, PBE0, M06, BH and HLYP, and CAM-B3LYP, were compared against their measured UV-vis spectra. It was found that hybrid functionals with modest amounts (20-30%) of included Hartree-Fock exchange are the most effective at matching the experimentally determined λmax. The interplay between the observed error, the functional chosen, and the degree of CT was analyzed by quantifying the CT character of λmax using four orbital and density-based metrics, Λ, Δr, SC and DCT, as well as the change in the dipole moment, Δµ. The results showed that the relationship between CT character and the functional dependence of error is not straightforward, with the observed behavior being dependent both on how CT was quantified and the functional groups present in the molecules themselves. It is concluded that this may be a result of the examined excitations having intermediate CT character. Ultimately it was found that the nature of the molecular "family" influenced how a given functional behaved as a function of CT character, with only two of the examined CT quantification methods, Δr and DCT, showing consistent behavior between the different molecular families. This suggests that further work needs to be done to ensure that currently used CT quantification methods show the same general trends across large sets of multiple dye families.

6.
Inorg Chem ; 58(14): 9443-9451, 2019 Jul 15.
Article in English | MEDLINE | ID: mdl-31251052

ABSTRACT

This work reports a combined experimental and computational mechanistic investigation into the electrocatalytic reduction of nitrite to ammonia by a cobalt macrocycle in an aqueous solution. In the presence of a nitrite substrate, the Co(III) precatalyst, [Co(DIM)(NO2)2]+ (DIM = 2,3-dimethyl-1,4,8,11-tetraazacyclotetradeca-1,3-diene), is formed in situ. Cyclic voltammetry and density functional theory (DFT) calculations show that this complex is reduced by two electrons, the first of which is coupled with nitrite ligand loss, to provide the active catalyst. Experimental observations suggest that the key N-O bond cleavage step is facilitated by intramolecular proton transfer from an amine group of the macrocycle to a nitro ligand, as supported by modeling several potential reaction pathways with DFT. These results provide insights into how the combination of a redox active ligand and first-row transition metal can facilitate the multiproton/electron process of nitrite reduction.

7.
Inorg Chem ; 57(16): 9907-9917, 2018 Aug 20.
Article in English | MEDLINE | ID: mdl-30088765

ABSTRACT

The quintet-singlet energy difference (Δ EQ/S) in Fe(II) polypyridine complexes is often interpreted in terms of metal-ligand π interactions. DFT calculations on a series of substituted [Fe(bpy)3]2+ (bpy = 2,2'-bipyridine) complexes show the disparate magnitudes of substituent effects on tuning Δ EQ/S and reduction potentials ( E°). In this series, E° spans a much larger range than Δ EQ/S (2.07 vs 0.29 eV). While small changes in Δ EQ/S are controlled by metal-ligand π interactions, large changes in E° arise from modification of the electrostatic environment around the Fe center. Molecular orbital analysis reveals that, contrary to the typical description of bpy as a π-acceptor, bpy is better described as acting as both a π-donor and π-acceptor in [Fe(bpy)3]2+ complexes, even when it is substituted with highly electron withdrawing substituents. Overall, substituent modification is a useful strategy for fine-tuning the ligand field strength but not for significant reordering of the spin-state manifold, despite the large effect on metal-ligand electrostatic interactions.

8.
Inorg Chem ; 57(9): 5585-5596, 2018 May 07.
Article in English | MEDLINE | ID: mdl-29683318

ABSTRACT

Twisting motions in six-coordinate trischelate transition-metal complexes have long been recognized as a potential reaction coordinate for nondissociative racemization by changing the coordination geometry from octahedral to trigonal prismatic in the transition state. These pathways have been previously established as the Bailar twist (conversion to D3 h symmetry) and the Ray-Dutt twist (conversion to C2 v symmetry). Twisting motions have been shown to be associated with changes in spin state and are therefore of relevance not only to thermal isomerization pathways but also to spin-crossover (SCO) and intersystem crossing mechanisms. In this work, density functional theory and complete active space self-consistent field calculations are used to probe the structural and energetic features of idealized Bailar and Ray-Dutt twisting mechanisms for a model Fe(II) polypyridine complex, [Fe(bpy)3]2+ (bpy = 2,2'-bipyridine). We find that the energies of the D3 h and C2 v trigonal prismatic structures are strongly dependent on spin state, with thermally accessible species only being possible on the quintet surface, enforcing the necessary relationship between SCO and torsional motion. The Ray-Dutt twist on the quintet surface is calculated to proceed with a low barrier, and is likely the preferable twisting mechanism for this complex. We additionally identify a new distorted Bailar twist of C3 h geometry, which is considerably lower in energy than the idealized D3 h structure due to a combination of both steric and electronic factors. The computational analysis presented herein offers insight into how Fe-N bond strength, interligand steric repulsion, and ligand flexibility can be exploited to influence the rates of different twisting mechanisms and the critical motions involved.

9.
J Am Chem Soc ; 139(13): 4901-4915, 2017 04 05.
Article in English | MEDLINE | ID: mdl-28282136

ABSTRACT

We recently reported a bis(imino)pyridine (or pyridine diimine, PDI) manganese precatalyst, (Ph2PPrPDI)Mn (1), that is active for the hydrosilylation of ketones and dihydrosilylation of esters. In this contribution, we reveal an expanded scope for 1-mediated hydrosilylation and propose two different mechanisms through which catalysis is achieved. Aldehyde hydrosilylation turnover frequencies (TOFs) of up to 4900 min-1 have been realized, the highest reported for first row metal-catalyzed carbonyl hydrosilylation. Additionally, 1 has been shown to mediate formate dihydrosilylation with leading TOFs of up to 330 min-1. Under stoichiometric and catalytic conditions, addition of PhSiH3 to (Ph2PPrPDI)Mn was found to result in partial conversion to a new diamagnetic hydride compound. Independent preparation of (Ph2PPrPDI)MnH (2) was achieved upon adding NaEt3BH to (Ph2PPrPDI)MnCl2 and single-crystal X-ray diffraction analysis revealed this complex to possess a capped trigonal bipyramidal solid-state geometry. When 2,2,2-trifluoroacetophenone was added to 1, radical transfer yielded (Ph2PPrPDI·)Mn(OC·(Ph)(CF3)) (3), which undergoes intermolecular C-C bond formation to produce the respective Mn(II) dimer, [(µ-O,Npy-4-OC(CF3)(Ph)-4-H-Ph2PPrPDI)Mn]2 (4). Upon finding 3 to be inefficient and 4 to be inactive, kinetic trials were conducted to elucidate the mechanisms of 1- and 2-mediated hydrosilylation. Varying the concentration of 1, substrate, and PhSiH3 revealed a first order dependence on each reagent. Furthermore, a kinetic isotope effect (KIE) of 2.2 ± 0.1 was observed for 1-catalyzed hydrosilylation of diisopropyl ketone, while a KIE of 4.2 ± 0.6 was determined using 2, suggesting 1 and 2 operate through different mechanisms. Although kinetic trials reveal 1 to be the more active precatalyst for carbonyl hydrosilylation, a concurrent 2-mediated pathway is more efficient for carboxylate hydrosilylation. Considering these observations, 1-catalyzed hydrosilylation is believed to proceed through a modified Ojima mechanism, while 2-mediated hydrosilylation occurs via insertion.

10.
J Org Chem ; 81(14): 5949-62, 2016 07 15.
Article in English | MEDLINE | ID: mdl-27295299

ABSTRACT

The mechanism of bismuth(V)-mediated thioglycoside activation was examined using reaction kinetics and quantum chemical reaction models. NMR experiments show an unusual nonlinear growth/decay curve for the glycosylation reaction. Further studies suggest an anomeric inversion of the ß-glycoside donor to the α-donor during its activation, even in the presence of a neighboring 2-position acetate. Interestingly, in situ anomerization was not observed in the activation of an α-glycoside donor, and this anomer also showed faster reaction times and higher product diastereoselectivites. Density functional theory calculations identify the structure of the promoter triphenyl bismuth ditriflate, [Ph3Bi(OTf)2, 1], in solution and map out the energetics of its interactions with the two thioglycoside anomers. These calculations suggest that 1 must bind the thiopropyl arm to induce triflate loss. The computational analyses also show that, unlike most O-glycosides, the ß- and α-donor S-glycosides are similar in energy. One energetically reasonable anomerization pathway of the donors is an SN1-like mechanism promoted by forming a bismuth-sulfonium adduct with the Lewis acidic Bi(V) for the formation of an oxacarbenium intermediate. Finally, the computed energy compensations needed to form these α vs ß Bi adducts is a possible explanation for the differential reactivity of these donors.

11.
Inorg Chem ; 54(9): 4475-82, 2015 May 04.
Article in English | MEDLINE | ID: mdl-25901758

ABSTRACT

Heating a 1:1 mixture of (CO)5MnBr and the phosphine-substituted pyridine diimine ligand, (Ph2PPr)PDI, in THF at 65 °C for 24 h afforded the diamagnetic complex [((Ph2PPr)PDI)Mn(CO)][Br] (1). Higher temperatures and longer reaction times resulted in bromide displacement of the remaining carbonyl ligand and the formation of paramagnetic ((Ph2PPr)PDI)MnBr (2). The molecular structure of 1 was determined by single crystal X-ray diffraction, and density functional theory (DFT) calculations indicate that this complex is best described as low-spin Mn(I) bound to a neutral (Ph2PPr)PDI chelating ligand. The redox properties of 1 and 2 were investigated by cyclic voltammetry (CV), and each complex was tested for electrocatalytic activity in the presence of both CO2 and Brønsted acids. Although electrocatalytic response was not observed when CO2, H2O, or MeOH was added to 1 individually, the addition of H2O or MeOH to CO2-saturated acetonitrile solutions of 1 afforded voltammetric responses featuring increased current density as a function of proton source concentration (icat/ip up to 2.4 for H2O or 4.2 for MeOH at scan rates of 0.1 V/s). Bulk electrolysis using 5 mM 1 and 1.05 M MeOH in acetonitrile at -2.2 V vs Fc(+/0) over the course of 47 min gave H2 as the only detectable product with a Faradaic efficiency of 96.7%. Electrochemical experiments indicate that CO2 promotes 1-mediated H2 production by lowering apparent pH. While evaluating 2 for electrocatalytic activity, this complex was found to decompose rapidly in the presence of acid. Although modest H(+) reduction activity was realized, the experiments described herein indicate that care must be taken when evaluating Mn complexes for electrocatalytic CO2 reduction.

12.
ACS ES T Water ; 3(8): 2776-2785, 2023 Aug 11.
Article in English | MEDLINE | ID: mdl-37588805

ABSTRACT

The susceptibility of 19 representative per- and polyfluoroalkyl substances (PFAS) to direct photolysis and defluorination under far-UVC 222 nm irradiation was investigated. Enhanced photolysis occurred for perfluorocarboxylic acids (PFCAs), fluorotelomer unsaturated carboxylic acids (FTUCAs), and GenX, compared to that at conventional 254 nm irradiation on a similar fluence basis, while other PFAS showed minimal decay. For degradable PFAS, up to 81% of parent compound decay (photolysis rate constant (k222 nm) = 8.19-34.76 L·Einstein-1; quantum yield (Φ222 nm) = 0.031-0.158) and up to 31% of defluorination were achieved within 4 h, and the major transformation products were shorter-chain PFCAs. Solution pH, dissolved oxygen, carbonate, phosphate, chloride, and humic acids had mild impacts, while nitrate significantly affected PFAS photolysis/defluorination at 222 nm. Decarboxylation is a crucial step of photolytic decay. The slower degradation of short-chain PFCAs than long-chain ones is related to molar absorptivity and may also be influenced by chain-length dependent structural factors, such as differences in pKa, conformation, and perfluoroalkyl radical stability. Meanwhile, theoretical calculations indicated that the widely proposed HF elimination from the alcohol intermediate (CnF2n+1OH) of PFCA is an unlikely degradation pathway due to high activation barriers. These new findings are useful for further development of far-UVC technology for PFAS in water treatment.

13.
Dalton Trans ; 50(41): 14566-14575, 2021 Oct 26.
Article in English | MEDLINE | ID: mdl-34586133

ABSTRACT

Controlling the energetics of spin crossover (SCO) in Fe(II)-polypyridine complexes is critical for designing new multifunctional materials or tuning the excited-state lifetimes of iron-based photosensitizers. It is well established that the Fe-N "breathing" mode is important for intersystem crossing from the singlet to the quintet state, but this does not preclude other, less obvious, structural distortions from affecting SCO. Previous work has shown that halogenation at the 6 and 6'' positions of tpy (tpy = 2,2';6',2''-terpyridine) in [Fe(tpy)2]2+ dramatically increased the lifetime of the excited MLCT state and also had a large impact on the ground state spin-state energetics. To gain insight into the origins of these effects, we used density functional theory calculations to explore how halogenation impacts spin-state energetics and molecular structure in this system. Based on previous work we focused on the ligand "rocking" motion associated with SCO in [Fe(tpy)2]2+ by constructing one-dimensional potential energy surfaces (PESs) along the tpy rocking angle for various spin states. It was found that halogenation has a clear and predictable impact on ligand rocking and spin-state energetics. The rocking is correlated to numerous other geometrical distortions, all of which likely affect the reorganization energies for spin-state changes. We have quantified trends in reorganization energy and also driving force for various spin-state changes and used them to interpret the experimentally measured excited-state lifetimes.

14.
Chem Commun (Camb) ; 57(35): 4332, 2021 Apr 29.
Article in English | MEDLINE | ID: mdl-33881064

ABSTRACT

Correction for 'Electrode-adsorption activates trans-[Cr(cyclam)Cl2]+ for electrocatalytic nitrate reduction' by Sarah E. Braley et al., Chem. Commun., 2020, 56, 603-606, DOI: 10.1039/C9CC08550E.

15.
Inorg Chem ; 49(8): 3661-75, 2010 Apr 19.
Article in English | MEDLINE | ID: mdl-20380467

ABSTRACT

Oxidative transformations using molecular oxygen are widespread in nature but remain a major challenge in chemical synthesis. Limited mechanistic understanding presents the main obstacle to exploiting O(2) in "bioinspired" industrial processes. Isotopic methods are presently being applied to characterize reactions of natural abundance O(2) including its coordination to reduced transition metals and cleavage of the O-O bond. This review describes the application of competitive oxygen-18 isotope effects, together with Density Functional Theory, to examine O(2) reductive activation under catalytically relevant conditions. The approach should be generally useful for probing small-molecule activation by transition-metal complexes.


Subject(s)
Coordination Complexes/chemistry , Oxygen Isotopes/chemistry , Kinetics , Oxidation-Reduction , Quantum Theory
16.
Chem Commun (Camb) ; 56(4): 603-606, 2020 Jan 14.
Article in English | MEDLINE | ID: mdl-31830160

ABSTRACT

Cyclic voltammetry reveals that aqueous trans-[Cr(cyclam)Cl2]+ is reversibly reduced at a mercury electrode, with a small prewave suggesting an adsorptive interaction between the complex and electrode surface. A catalytic current is observed in the presence of excess nitrate, with the onset potential for catalysis at the prewave. Nitrate is electrocatalytically reduced to nitrite, with preliminary mechanistic investigations implicating a chromium oxo intermediate.

17.
Chem Sci ; 9(22): 4950-4958, 2018 Jun 14.
Article in English | MEDLINE | ID: mdl-29938022

ABSTRACT

The cobalt macrocycle complex [Co(DIM)Br2]+ (DIM = 2,3-dimethyl-1,4,8,11-tetraazacyclotetradeca-1,3-diene) is an electrocatalyst for the selective reduction of nitrate to ammonia in aqueous solution. The catalyst operates over a wide pH range and with very high faradaic efficiency, albeit with large overpotential. Experimental investigations, supported by electronic structure calculations, reveal that catalysis commences when nitrate binds to the two-electron reduced species CoII(DIM-), where cobalt and the macrocycle are each reduced by a single electron. Several mechanisms for the initial reduction of nitrate to nitrite were explored computationally and found to be feasible at room temperature. The reduced DIM ligand plays an important role in these mechanisms by directly transferring a single electron to the bound nitrate substrate, activating it for further reactions. These studies further reveal that the DIM macrocycle is critical to nitrate reduction, specifically its combination of redox non-innocence, hydrogen-bonding functionality and flexibility in coordination mode.

18.
Chem Commun (Camb) ; 54(72): 10076-10079, 2018 Sep 06.
Article in English | MEDLINE | ID: mdl-30083691

ABSTRACT

Amphiphilic alkoxybenzonitriles (ABNs) of varying chain length are studied at the solution/graphite interface to analyze dynamics of assembly. Competitive self-assembly between ABNs and alkanoic acid solvent is shown by scanning tunneling microscopy (STM) to be controlled by concentration and molecular size. Molecular dynamics (MD) simulations reveal key roles of the sub-nanosecond fundamental steps of desorption, adsorption, and on-surface motion. We discovered asymmetry in desorption-adsorption steps. Desorption starting from alkyl chain detachment from the surface is favored due to dynamic occlusion by neighbouring chains. Even though the nitrile head has a strong solvent affinity, it more frequently re-adsorbs following a detachment event.

19.
J Mol Model ; 23(7): 214, 2017 Jul.
Article in English | MEDLINE | ID: mdl-28656484

ABSTRACT

Knowledge of multi-dimensional carbohydrate structure is essential when delineating structure-function relationships in the development of analytical techniques such as ion mobility-mass spectrometry and of carbohydrate-based therapeutics, as well as in rationally modifying the chemical and physical properties of drugs and materials based on sugars. Although monosaccharides are conventionally presumed to adopt the canonical 4C1 chair conformation, it is not well known how altering the substituent identity around the pyranose ring affects the favored conformational state. This work provides a comprehensive and systematic computational comparison of all eight aldohexose isomers in the gas phase with reduction and oxidation at the C-6 position using density functional theory (M05-2X/cc-pVTZ(-f)//B3LYP/6-31G**) to determine the conformational and anomeric preference for each sugar in the gas phase. All 6-deoxyhexose and aldohexose isomers favored the 4C1 chair conformation, while oxidation at C-6 showed a shift in equilibrium to favor the 1C4 chair for ß-alluronic acid, ß-guluronic acid, and ß-iduronic acid. The anomeric preference was found to be significantly affected by a remote change in oxidation state, with the alternate anomer favored for several isomers. These findings provide a fundamental platform to empirically test steric and electronic effects of pyranose substituents, with the goal of formulating straightforward rules that govern carbohydrate reactivity and drive quicker, more efficient syntheses. Graphical abstract A systematic comparative conformational analysis of all eight aldohexose isomers using DFT methods (M05-2X/cc-pVTZ(-f)) reveals changes in anomeric and ring conformational preference upon reduction or oxidation at the C-6 position for several sugars.

20.
J Am Soc Mass Spectrom ; 27(5): 834-46, 2016 May.
Article in English | MEDLINE | ID: mdl-26926443

ABSTRACT

Immonium ions are commonly observed in the high energy fragmentation of peptide ions. In a MALDI-TOF/TOF mass spectrometer, singly charged peptides photofragmented with 157 nm VUV light yield a copious abundance of immonium ions, especially those from aromatic residues. However, their intensities may vary from one peptide to another. In this work, the effect of varying amino acid position, peptide length, and peptide composition on immonium ion yield is investigated. Internal immonium ions are found to have the strongest intensity, whereas immonium ions arising from C-terminal residues are the weakest. Peptide length and competition among residues also strongly influence the immonium ion production. Quantum calculations provide insights about immonium ion structures and the fragment ion conformations that promote or inhibit immonium ion formation.


Subject(s)
Peptides/analysis , Peptides/chemistry , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Amino Acids, Aromatic/chemistry , Arginine/chemistry , Photolysis , Tandem Mass Spectrometry
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