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1.
Int J Mol Sci ; 24(6)2023 Mar 16.
Article in English | MEDLINE | ID: mdl-36982778

ABSTRACT

Myeloperoxidase (MPO) is a highly oxidative, pro-inflammatory enzyme involved in post-myocardial infarction (MI) injury and is a potential therapeutic target. While multiple MPO inhibitors have been developed, the lack of an imaging reporter to select appropriate patients and assess therapeutic efficacy has hampered clinical development. Thus, a translational imaging method to detect MPO activity non-invasively would help to better understand the role MPO plays in MI and facilitate novel therapy development and clinical validation. Interestingly, many MPO inhibitors affect both intracellular and extracellular MPO, but previous MPO imaging methods can only report extracellular MPO activity. In this study, we found that an MPO-specific PET imaging agent (18F-MAPP) can cross cell membranes to report intracellular MPO activity. We showed that 18F-MAPP can track the treatment effect of an MPO inhibitor (PF-2999) at different doses in experimental MI. The imaging results were corroborated by ex vivo autoradiography and gamma counting data. Furthermore, extracellular and intracellular MPO activity assays revealed that 18F-MAPP imaging can report the changes induced by PF-2999 on both intracellular and extracellular MPO activities. These findings support 18F-MAPP as a translational candidate to noninvasively report MPO activity and accelerate drug development against MPO and other related inflammatory targets.


Subject(s)
Myocardial Infarction , Peroxidase , Humans , Peroxidase/metabolism , Myocardial Infarction/diagnostic imaging , Myocardial Infarction/drug therapy , Myocardial Infarction/metabolism , Positron-Emission Tomography
2.
Proc Natl Acad Sci U S A ; 116(24): 11966-11971, 2019 06 11.
Article in English | MEDLINE | ID: mdl-31123149

ABSTRACT

Myeloperoxidase (MPO) is a critical proinflammatory enzyme implicated in cardiovascular, neurological, and rheumatological diseases. Emerging therapies targeting inflammation have raised interest in tracking MPO activity in patients. We describe 18F-MAPP, an activatable MPO activity radioprobe for positron emission tomography (PET) imaging. The activated radioprobe binds to proteins and accumulates at sites of MPO activity. The radioprobe 18F-MAPP has a short blood half-life, remains stable in plasma, does not demonstrate cytotoxicity, and crosses the intact blood-brain barrier. The 18F-MAPP imaging detected sites of elevated MPO activity in living mice embedded with human MPO and in mice induced with chemical inflammation or myocardial infarction. The 18F-MAPP PET imaging noninvasively differentiated varying amounts of MPO activity, competitive inhibition, and MPO deficiency in living animals, confirming specificity and showing that the radioprobe can quantify changes in in vivo MPO activity. The radiosynthesis has been optimized and automated, an important step in translation. These data indicate that 18F-MAPP is a promising translational candidate to noninvasively monitor MPO activity and inflammation in patients.


Subject(s)
Peroxidase/metabolism , Animals , Female , Fluorine Radioisotopes/metabolism , Humans , Inflammation/metabolism , Mice , Mice, Inbred C57BL , Myocardial Infarction/metabolism , Positron-Emission Tomography/methods
3.
Drug Metab Dispos ; 45(5): 501-511, 2017 05.
Article in English | MEDLINE | ID: mdl-28254951

ABSTRACT

The propensity for CYP3A4 induction by 2-(6-(5-chloro-2-methoxyphenyl)-4-oxo-2-thioxo-3,4-dihydropyrimidin-1(2H)-yl)acetamide (PF-06282999), an irreversible inactivator of myeloperoxidase, was examined in the present study. Studies using human hepatocytes revealed moderate increases in CYP3A4 mRNA and midazolam-1'-hydroxylase activity in a PF-06282999 dose-dependent fashion. At the highest tested concentration of 300 µM, PF-06282999 caused maximal induction in CYP3A4 mRNA and enzyme activity ranging from 56% to 86% and 47% t0 72%, respectively, of rifampicin response across the three hepatocyte donor pools. In a clinical drug-drug interaction (DDI) study, the mean midazolam Cmax and area under the curve (AUC) values following 14-day treatment with PF-06282999 decreased in a dose-dependent fashion with a maximum decrease in midazolam AUC0-inf and Cmax of ∼57.2% and 41.1% observed at the 500 mg twice daily dose. The moderate impact on midazolam pharmacokinetics at the 500 mg twice daily dose of PF-06282999 was also reflected in statistically significant changes in plasma 4ß-hydroxycholesterol/cholesterol and urinary 6ß-hydroxycortisol/cortisol ratios. Changes in plasma and urinary CYP3A4 biomarkers did not reach statistical significance at the 125 mg three times daily dose of PF-06282999, despite a modest decrease in midazolam systemic exposure. Predicted DDI magnitude based on the in vitro induction parameters and simulated pharmacokinetics of perpetrator (PF-06282999) and victim (midazolam) using the Simcyp (Simcyp Ltd., Sheffield, United Kingdom) population-based simulator were in reasonable agreement with the observed clinical data. Since the magnitude of the 4ß-hydroxycholesterol or 6ß-hydroxycortisol ratio change was generally smaller than the magnitude of the midazolam AUC change with PF-06282999, a pharmacokinetic interaction study with midazolam ultimately proved important for assessment of DDI via CYP3A4 induction.


Subject(s)
Acetamides/pharmacology , Cytochrome P-450 CYP3A/biosynthesis , Enzyme Inhibitors/pharmacology , Pyrimidinones/pharmacology , Acetamides/pharmacokinetics , Adult , Cells, Cultured , Cytochrome P-450 CYP3A/genetics , Cytochrome P-450 CYP3A/metabolism , Enzyme Induction/drug effects , Enzyme Inhibitors/pharmacokinetics , Female , Hepatocytes/drug effects , Hepatocytes/enzymology , Humans , Male , Middle Aged , Peroxidase/antagonists & inhibitors , Pyrimidinones/pharmacokinetics , RNA, Messenger/biosynthesis , RNA, Messenger/genetics , Young Adult
4.
Drug Metab Dispos ; 44(8): 1262-9, 2016 08.
Article in English | MEDLINE | ID: mdl-27079250

ABSTRACT

N1-Substituted-6-arylthiouracils, represented by compound 1 [6-(2,4-dimethoxyphenyl)-1-(2-hydroxyethyl)-2-thioxo-2,3-dihydropyrimidin-4(1H)-one], are a novel class of selective irreversible inhibitors of human myeloperoxidase. The present account is a summary of our in vitro studies on the facile oxidative desulfurization in compound 1 to a cyclic ether metabolite M1 [5-(2,4-dimethoxyphenyl)-2,3-dihydro-7H-oxazolo[3,2-a]pyrimidin-7-one] in NADPH-supplemented rats (t1/2 [half-life = mean ± S.D.] = 8.6 ± 0.4 minutes) and dog liver microsomes (t1/2 = 11.2 ± 0.4 minutes), but not in human liver microsomes (t1/2 > 120 minutes). The in vitro metabolic instability also manifested in moderate-to-high plasma clearances of the parent compound in rats and dogs with significant concentrations of M1 detected in circulation. Mild heat deactivation of liver microsomes or coincubation with the flavin-containing monooxygenase (FMO) inhibitor imipramine significantly diminished M1 formation. In contrast, oxidative metabolism of compound 1 to M1 was not inhibited by the pan cytochrome P450 inactivator 1-aminobenzotriazole. Incubations with recombinant FMO isoforms (FMO1, FMO3, and FMO5) revealed that FMO1 principally catalyzed the conversion of compound 1 to M1. FMO1 is not expressed in adult human liver, which rationalizes the species difference in oxidative desulfurization. Oxidation by FMO1 followed Michaelis-Menten kinetics with Michaelis-Menten constant, maximum rate of oxidative desulfurization, and intrinsic clearance values of 209 µM, 20.4 nmol/min/mg protein, and 82.7 µl/min/mg protein, respectively. Addition of excess glutathione essentially eliminated the conversion of compound 1 to M1 in NADPH-supplemented rat and dog liver microsomes, which suggests that the initial FMO1-mediated S-oxygenation of compound 1 yields a sulfenic acid intermediate capable of redox cycling to the parent compound in a glutathione-dependent fashion or undergoing further oxidation to a more electrophilic sulfinic acid species that is trapped intramolecularly by the pendant alcohol motif in compound 1.


Subject(s)
Enzyme Inhibitors/pharmacokinetics , Liver/enzymology , Oxygenases/metabolism , Peroxidase/antagonists & inhibitors , Thiouracil/pharmacokinetics , Administration, Intravenous , Animals , Biotransformation , Dogs , Enzyme Inhibitors/administration & dosage , Enzyme Inhibitors/blood , Half-Life , Humans , Male , Metabolic Clearance Rate , Microsomes, Liver/enzymology , Models, Biological , Oxidation-Reduction , Oxygenases/antagonists & inhibitors , Peroxidase/metabolism , Rats, Wistar , Species Specificity , Thiouracil/administration & dosage , Thiouracil/analogs & derivatives , Thiouracil/blood
5.
J Pharmacol Exp Ther ; 353(2): 288-98, 2015 May.
Article in English | MEDLINE | ID: mdl-25698787

ABSTRACT

Small vessel vasculitis is a life-threatening condition and patients typically present with renal and pulmonary injury. Disease pathogenesis is associated with neutrophil accumulation, activation, and oxidative damage, the latter being driven in large part by myeloperoxidase (MPO), which generates hypochlorous acid among other oxidants. MPO has been associated with vasculitis, disseminated vascular inflammation typically involving pulmonary and renal microvasculature and often resulting in critical consequences. MPO contributes to vascular injury by 1) catabolizing nitric oxide, impairing vasomotor function; 2) causing oxidative damage to lipoproteins and endothelial cells, leading to atherosclerosis; and 3) stimulating formation of neutrophil extracellular traps, resulting in vessel occlusion and thrombosis. Here we report a selective 2-thiouracil mechanism-based MPO inhibitor (PF-1355 [2-(6-(2,5-dimethoxyphenyl)-4-oxo-2-thioxo-3,4-dihydropyrimidin-1(2H)-yl)acetamide) and demonstrate that MPO is a critical mediator of vasculitis in mouse disease models. A pharmacokinetic/pharmacodynamic response model of PF-1355 exposure in relation with MPO activity was derived from mouse peritonitis. The contribution of MPO activity to vasculitis was then examined in an immune complex model of pulmonary disease. Oral administration of PF-1355 reduced plasma MPO activity, vascular edema, neutrophil recruitment, and elevated circulating cytokines. In a model of anti-glomerular basement membrane disease, formerly known as Goodpasture disease, albuminuria and chronic renal dysfunction were completely suppressed by PF-1355 treatment. This study shows that MPO activity is critical in driving immune complex vasculitis and provides confidence in testing the hypothesis that MPO inhibition will provide benefit in treating human vasculitic diseases.


Subject(s)
Acetamides/pharmacology , Enzyme Inhibitors/pharmacology , Glomerular Basement Membrane/drug effects , Glomerulonephritis/prevention & control , Immune Complex Diseases/prevention & control , Peroxidase/antagonists & inhibitors , Pyrimidines/pharmacology , Pyrimidinones/pharmacology , Vasculitis/prevention & control , Animals , Glomerular Basement Membrane/pathology , Glomerulonephritis/enzymology , Glomerulonephritis/immunology , Glomerulonephritis/pathology , Humans , Immune Complex Diseases/enzymology , Immune Complex Diseases/immunology , Immune Complex Diseases/pathology , Lung/blood supply , Lung/drug effects , Lung/immunology , Mice , Neutrophil Infiltration/drug effects , Signal Transduction/drug effects , Vasculitis/enzymology , Vasculitis/immunology , Vasculitis/pathology
6.
Toxicol Pathol ; 42(6): 970-83, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24067673

ABSTRACT

Thionamides such as propylthiouracil (PTU) and methimazole (MMI) have been used for more than 50 years to treat the more common causes of thyrotoxicosis/hyperthyroidism such as Graves' disease. Serious adverse effects associated with thionamides in humans include idiosyncratic liver damage, agranulocytosis, aplastic anemia, and vasculitis. Both prospective and retrospective clinical studies with these drugs have failed to identify predictive biomarker for these adverse effects. To assess whether rat is a good model for predicting drug-related adverse events in the liver and in the bone marrow, we conducted a comprehensive study in male rats with multiple doses of PTU and MMI. As expected, euthyroid animals became hypothyroid along with several secondary changes associated with hypothyroidism. There were slight reductions in red blood cell parameters along with some marginal effects on the bone marrow elements. However, there was no evidence of significant neutropenia and liver injury in both PTU-treated and MMI-treated cohorts. MMI-related effects were noted in the seminiferous tubules of the testes. Overall, 1-month daily treatment of euthyroid rats with PTU or MMI resulted in hypothyroidism, minor bone marrow effects, and several secondary effects associated with hypothyroidism, but without any evidence of adverse effects reported in humans including liver injury and agranulocytosis.


Subject(s)
Methimazole/toxicity , Propylthiouracil/toxicity , Testis/drug effects , Thyroid Gland/drug effects , Animals , Male , Methimazole/administration & dosage , Methimazole/blood , Methimazole/pharmacokinetics , Propylthiouracil/administration & dosage , Propylthiouracil/blood , Propylthiouracil/pharmacokinetics , Rats , Rats, Wistar , Testis/chemistry , Testis/pathology , Thyroid Gland/chemistry , Thyroid Gland/pathology , Toxicity Tests
7.
Cancer Discov ; 13(11): 2432-2447, 2023 11 01.
Article in English | MEDLINE | ID: mdl-37623743

ABSTRACT

Phosphoinositide 3-kinase α (PIK3CA) is one of the most mutated genes across cancers, especially breast, gynecologic, and head and neck squamous cell carcinoma tumors. Mutations occur throughout the gene, but hotspot mutations in the helical and kinase domains predominate. The therapeutic benefit of isoform-selective PI3Kα inhibition was established with alpelisib, which displays equipotent activity against the wild-type and mutant enzyme. Inhibition of wild-type PI3Kα is associated with severe hyperglycemia and rash, which limits alpelisib use and suggests that selectively targeting mutant PI3Kα could reduce toxicity and improve efficacy. Here we describe STX-478, an allosteric PI3Kα inhibitor that selectively targets prevalent PI3Kα helical- and kinase-domain mutant tumors. STX-478 demonstrated robust efficacy in human tumor xenografts without causing the metabolic dysfunction observed with alpelisib. Combining STX-478 with fulvestrant and/or cyclin-dependent kinase 4/6 inhibitors was well tolerated and provided robust and durable tumor regression in ER+HER2- xenograft tumor models. SIGNIFICANCE: These preclinical data demonstrate that the mutant-selective, allosteric PI3Kα inhibitor STX-478 provides robust efficacy while avoiding the metabolic dysfunction associated with the nonselective inhibitor alpelisib. Our results support the ongoing clinical evaluation of STX-478 in PI3Kα-mutated cancers, which is expected to expand the therapeutic window and mitigate counterregulatory insulin release. See related commentary by Kearney and Vasan, p. 2313. This article is featured in Selected Articles from This Issue, p. 2293.


Subject(s)
Breast Neoplasms , Neoplasms , Humans , Female , Heterografts , Phosphatidylinositol 3-Kinases/genetics , Phosphatidylinositol 3-Kinases/metabolism , Neoplasms/drug therapy , Neoplasms/genetics , Class I Phosphatidylinositol 3-Kinases/genetics
8.
Cell Immunol ; 275(1-2): 47-54, 2012.
Article in English | MEDLINE | ID: mdl-22507871

ABSTRACT

B-lymphocytes produce protective antibodies but also contribute to autoimmunity. In particular, marginal zone (MZ) B cells recognize both microbial components and self-antigens. B cell trafficking is critical for B cell activation and is controlled by chemoattactants such as CXCL13 and sphingosine 1-phosphate (S1P). The related tyrosine kinases focal adhesion kinase (FAK) and proline-rich tyrosine kinase (Pyk2) regulate cell migration and adhesion but their roles in B cells are not fully understood. Using a novel Pyk2-selective inhibitor described herein (PF-719), as well as a FAK-selective inhibitor, we show that both Pyk2 and FAK are important for CXCL13- and S1P-induced migration of B-2 cells and MZ B cells. In contrast, LFA-1-mediated adhesion required only Pyk2 whereas activation of the Akt pro-survival kinase required FAK but not Pyk2. Thus Pyk2 and FAK mediate critical processes in B cells and these inhibitors can be used to further elucidate their functions in B cells.


Subject(s)
B-Lymphocytes/drug effects , Chemotaxis/drug effects , Focal Adhesion Kinase 2/antagonists & inhibitors , Focal Adhesion Protein-Tyrosine Kinases/antagonists & inhibitors , Proto-Oncogene Proteins c-akt/metabolism , Pyrimidines/pharmacology , Quinolones/pharmacology , Sulfones/pharmacology , para-Aminobenzoates , 4-Aminobenzoic Acid/pharmacology , Animals , B-Lymphocytes/cytology , B-Lymphocytes/enzymology , Cell Adhesion/drug effects , Cell Line , Chemokine CXCL13/pharmacology , Chemotactic Factors/pharmacology , Enzyme Activation/drug effects , Lysophospholipids/pharmacology , Mice , Mice, Inbred C57BL , Sphingosine/analogs & derivatives , Sphingosine/pharmacology
9.
Bioorg Med Chem Lett ; 22(24): 7523-9, 2012 Dec 15.
Article in English | MEDLINE | ID: mdl-23153798

ABSTRACT

Previous drug discovery efforts identified classical PYK2 kinase inhibitors such as 2 and 3 that possess selectivity for PYK2 over its intra-family isoform FAK. Efforts to identify more kinome-selective chemical matter that stabilize a DFG-out conformation of the enzyme are described herein. Two sub-series of PYK2 inhibitors, an indole carboxamide-urea and a pyrazole-urea have been identified and found to have different binding interactions with the hinge region of PYK2. These leads proved to be more selective than the original classical inhibitors.


Subject(s)
Focal Adhesion Kinase 2/antagonists & inhibitors , Indoles/pharmacology , Protein Kinase Inhibitors/pharmacology , Pyrazoles/pharmacology , Urea/pharmacology , Animals , Crystallography, X-Ray , Dose-Response Relationship, Drug , Focal Adhesion Kinase 2/metabolism , HEK293 Cells , Humans , Indoles/chemical synthesis , Indoles/chemistry , Models, Molecular , Molecular Structure , Protein Kinase Inhibitors/chemical synthesis , Protein Kinase Inhibitors/chemistry , Pyrazoles/chemical synthesis , Pyrazoles/chemistry , Rats , Structure-Activity Relationship , Urea/analogs & derivatives , Urea/chemistry
10.
Exp Cell Res ; 317(13): 1860-71, 2011 Aug 01.
Article in English | MEDLINE | ID: mdl-21640103

ABSTRACT

Angiogenesis is regulated by both soluble growth factors and cellular interactions with the extracellular matrix (ECM). While cell adhesion via integrins has been shown to be required for angiogenesis, the effects of quantitative changes in cell adhesion and spreading against the ECM remain less clear. Here, we show that angiogenic sprouting in natural and engineered three-dimensional matrices exhibited a biphasic response, with peak sprouting when adhesion to the matrix was limited to intermediate levels. Examining changes in global gene expression to determine a genetic basis for this response, we demonstrate a vascular endothelial growth factor (VEGF)-induced upregulation of genes associated with vascular invasion and remodeling when cell adhesion was limited, whereas cells on highly adhesive surfaces upregulated genes associated with proliferation. To explore a mechanistic basis for this effect, we turned to focal adhesion kinase (FAK), a central player in adhesion signaling previously implicated in angiogenesis, and its homologue, proline-rich tyrosine kinase 2 (Pyk2). While FAK signaling had some impact, our results suggested that Pyk2 can regulate both gene expression and endothelial sprouting through its enhanced activation by VEGF in limited adhesion contexts. We also demonstrate decreased sprouting of tissue explants from Pyk2-null mice as compared to wild type mice as further confirmation of the role of Pyk2 in angiogenic sprouting. These results suggest a surprising finding that limited cell adhesion can enhance endothelial responsiveness to VEGF and demonstrate a novel role for Pyk2 in the adhesive regulation of angiogenesis.


Subject(s)
Focal Adhesion Kinase 2/metabolism , Neovascularization, Physiologic , Animals , Cell Adhesion , Cells, Cultured , Endothelial Cells/metabolism , Focal Adhesion Kinase 2/deficiency , Focal Adhesion Protein-Tyrosine Kinases/metabolism , Gene Expression Regulation , Humans , Ligands , Mice , Mice, Knockout , Neovascularization, Physiologic/genetics , Signal Transduction , Vascular Endothelial Growth Factor A/metabolism
11.
J Chem Inf Model ; 51(6): 1199-204, 2011 Jun 27.
Article in English | MEDLINE | ID: mdl-21568278

ABSTRACT

This work addresses the link between selectivity and an unusual, folded conformation for the P-loop observed initially for MAP4K4 and subsequently for other kinases. Statistical and computational analyses of our crystal structure database demonstrate that inhibitors that induce the P-loop folded conformation tend to be more selective, especially if they take advantage of this specific conformation by interacting more favorably with a conserved Tyr or Phe residue from the P-loop.


Subject(s)
Extracellular Signal-Regulated MAP Kinases/metabolism , Models, Molecular , Databases, Protein , Extracellular Signal-Regulated MAP Kinases/antagonists & inhibitors , Extracellular Signal-Regulated MAP Kinases/chemistry , Protein Conformation , Protein Folding , Protein Kinase Inhibitors/chemistry , Protein Kinase Inhibitors/pharmacology , Substrate Specificity
12.
J Biol Chem ; 284(34): 22865-77, 2009 Aug 21.
Article in English | MEDLINE | ID: mdl-19561089

ABSTRACT

Signaling by the B cell receptor (BCR) promotes integrin-mediated adhesion and cytoskeletal reorganization. This results in B cell spreading, which enhances the ability of B cells to bind antigens and become activated. Proline-rich tyrosine kinase (Pyk2) and focal adhesion kinase (FAK) are related cytoplasmic tyrosine kinases that regulate cell adhesion, cell morphology, and cell migration. In this report we show that BCR signaling and integrin signaling collaborate to induce the phosphorylation of Pyk2 and FAK on key tyrosine residues, a modification that increases the kinase activity of Pyk2 and FAK. Activation of the Rap GTPases is critical for BCR-induced integrin activation as well as for BCR- and integrin-induced reorganization of the actin cytoskeleton. We now show that Rap activation is essential for BCR-induced phosphorylation of Pyk2 and for integrin-induced phosphorylation of Pyk2 and FAK. Moreover Rap-dependent phosphorylation of Pyk2 and FAK required an intact actin cytoskeleton as well as actin dynamics, suggesting that Rap regulates Pyk2 and FAK via its effects on the actin cytoskeleton. Importantly B cell spreading induced by BCR/integrin co-stimulation or by integrin engagement was inhibited by short hairpin RNA-mediated knockdown of either Pyk2 or FAK expression and by treatment with PF-431396, a chemical inhibitor that blocks the kinase activities of both Pyk2 and FAK. Thus Pyk2 and FAK are downstream targets of the Rap GTPases that play a key role in regulating B cell morphology.


Subject(s)
B-Cell Activation Factor Receptor/physiology , B-Lymphocytes/metabolism , Focal Adhesion Kinase 1/metabolism , Focal Adhesion Kinase 2/metabolism , Integrins/physiology , rap GTP-Binding Proteins/physiology , Actins/metabolism , Animals , B-Lymphocytes/cytology , B-Lymphocytes/drug effects , Cell Line, Tumor , Cells, Cultured , Extracellular Matrix/metabolism , Fluorescent Antibody Technique , Focal Adhesion Kinase 1/genetics , Focal Adhesion Kinase 2/genetics , Immunoblotting , Integrins/antagonists & inhibitors , Mice , Mice, Inbred C57BL , Microscopy, Confocal , Phosphorylation , RNA, Small Interfering , Reverse Transcriptase Polymerase Chain Reaction , rap GTP-Binding Proteins/genetics
13.
Heart ; 106(5): 342-349, 2020 03.
Article in English | MEDLINE | ID: mdl-31911501

ABSTRACT

OBJECTIVE: Heart failure with preserved ejection fraction (HFpEF) is a heterogeneous syndrome. We aimed to derive HFpEF phenotype-based groups ('phenogroups') based on clinical and echocardiogram data using machine learning, and to compare clinical characteristics, proteomics and outcomes across the phenogroups. METHODS: We applied model-based clustering to 32 echocardiogram and 11 clinical and laboratory variables collected in stable condition from 320 HFpEF outpatients in the Karolinska-Rennes cohort study (56% female, median 78 years (IQR: 71-83)). Baseline proteomics and the composite end point of all-cause mortality or heart failure (HF) hospitalisation were used in secondary analyses. RESULTS: We identified six phenogroups, for which significant differences in the prevalence of concomitant atrial fibrillation (AF), anaemia and kidney disease were observed (p<0.05). Fifteen out of 86 plasma proteins differed between phenogroups (false discovery rate, FDR<0.05), including biomarkers of HF, AF and kidney function. The composite end point was significantly different between phenogroups (log-rank p<0.001), at short-term (100 days), mid-term (18 months) and longer-term follow-up (1000 days). Phenogroup 2 was older, with poorer diastolic and right ventricular function and higher burden of risk factors as AF (85%), hypertension (83%) and chronic obstructive pulmonary disease (30%). In this group a third experienced the primary outcome to 100 days, and two-thirds to 18 months (HR (95% CI) versus phenogroups 1, 3, 4, 5, 6: 1.5 (0.8-2.9); 5.7 (2.6-12.8); 2.9 (1.5-5.6); 2.7 (1.6-4.6); 2.1 (1.2-3.9)). CONCLUSIONS: Using machine learning we identified distinct HFpEF phenogroups with differential characteristics and outcomes, as well as differential levels of inflammatory and cardiovascular proteins.


Subject(s)
Heart Failure/classification , Heart Failure/physiopathology , Stroke Volume , Aged , Aged, 80 and over , Cohort Studies , Echocardiography , Female , Heart Failure/diagnostic imaging , Heart Failure/genetics , Humans , Machine Learning , Male , Phenotype
14.
Nat Commun ; 11(1): 163, 2020 01 09.
Article in English | MEDLINE | ID: mdl-31919418

ABSTRACT

Heart failure (HF) is a leading cause of morbidity and mortality worldwide. A small proportion of HF cases are attributable to monogenic cardiomyopathies and existing genome-wide association studies (GWAS) have yielded only limited insights, leaving the observed heritability of HF largely unexplained. We report results from a GWAS meta-analysis of HF comprising 47,309 cases and 930,014 controls. Twelve independent variants at 11 genomic loci are associated with HF, all of which demonstrate one or more associations with coronary artery disease (CAD), atrial fibrillation, or reduced left ventricular function, suggesting shared genetic aetiology. Functional analysis of non-CAD-associated loci implicate genes involved in cardiac development (MYOZ1, SYNPO2L), protein homoeostasis (BAG3), and cellular senescence (CDKN1A). Mendelian randomisation analysis supports causal roles for several HF risk factors, and demonstrates CAD-independent effects for atrial fibrillation, body mass index, and hypertension. These findings extend our knowledge of the pathways underlying HF and may inform new therapeutic strategies.


Subject(s)
Atrial Fibrillation/genetics , Cardiomyopathies/genetics , Coronary Artery Disease/genetics , Heart Failure/genetics , Heart Failure/pathology , Ventricular Function, Left/genetics , Adaptor Proteins, Signal Transducing/genetics , Apoptosis Regulatory Proteins/genetics , Cardiomyopathies/pathology , Carrier Proteins/genetics , Case-Control Studies , Cyclin-Dependent Kinase Inhibitor p21/genetics , Genome-Wide Association Study , Humans , Mendelian Randomization Analysis , Microfilament Proteins/genetics , Muscle Proteins/genetics , Risk Factors
15.
Bioorg Med Chem Lett ; 19(12): 3253-8, 2009 Jun 15.
Article in English | MEDLINE | ID: mdl-19428251

ABSTRACT

The synthesis, in vitro properties, and in vivo pharmacokinetics for a series of sulfoximine-substituted trifluoromethylpyrimidines as inhibitors of proline-rich tyrosine kinase, a target for the possible treatment of osteoporosis, are described. These compounds were prepared as surrogates of the corresponding sulfone compound 1. Sulfone 1 was an attractive PYK2 lead compound; however, subsequent studies determined this compound possessed high dofetilide binding, which is an early indicator of cardiovascular safety. Surprisingly, the corresponding sulfoximine analogs displayed significantly lower dofetilide binding, which, for N-methylsulfoximine (S)-14a, translated to lower activity in a patch clamp hERG K(+) ion channel screen. In addition, compound (S)-14a shows good oral exposure in a rat pharmacokinetic model.


Subject(s)
Ether-A-Go-Go Potassium Channels/metabolism , Focal Adhesion Kinase 2/antagonists & inhibitors , Pyrimidines/chemistry , Pyrimidines/pharmacology , Administration, Oral , Animals , Drug Evaluation, Preclinical , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacokinetics , Enzyme Inhibitors/pharmacology , Humans , Imines/chemistry , Osteoporosis/drug therapy , Patch-Clamp Techniques , Phenethylamines , Pyrimidines/pharmacokinetics , Rats , Structure-Activity Relationship , Sulfonamides , Sulfones/chemistry
16.
PLoS One ; 14(3): e0214150, 2019.
Article in English | MEDLINE | ID: mdl-30889221

ABSTRACT

Myeloperoxidase (MPO) is a highly abundant protein within the neutrophil that is associated with lipoprotein oxidation, and increased plasma MPO levels are correlated with poor prognosis after myocardial infarct. Thus, MPO inhibitors have been developed for the treatment of heart failure and acute coronary syndrome in humans. 2-(6-(5-Chloro-2-methoxyphenyl)-4-oxo-2-thioxo-3,4-dihydropyrimidin-1(2H)-yl)acetamide PF-06282999 is a recently described selective small molecule mechanism-based inactivator of MPO. Here, utilizing PF-06282999, we investigated the role of MPO to regulate atherosclerotic lesion formation and composition in the Ldlr-/- mouse model of atherosclerosis. Though MPO inhibition did not affect lesion area in Ldlr-/- mice fed a Western diet, reduced necrotic core area was observed in aortic root sections after MPO inhibitor treatment. MPO inhibition did not alter macrophage content in and leukocyte homing to atherosclerotic plaques. To assess non-invasive monitoring of plaque inflammation, [18F]-Fluoro-deoxy-glucose (FDG) was administered to Ldlr-/- mice with established atherosclerosis that had been treated with clinically relevant doses of PF-06282999, and reduced FDG signal was observed in animals treated with a dose of PF-06282999 that corresponded with reduced necrotic core area. These data suggest that MPO inhibition does not alter atherosclerotic plaque area or leukocyte homing, but rather alters the inflammatory tone of atherosclerotic lesions; thus, MPO inhibition could have utility to promote atherosclerotic lesion stabilization and prevent atherosclerotic plaque rupture.


Subject(s)
Acetamides/pharmacology , Atherosclerosis/drug therapy , Macrophages/enzymology , Peroxidase/antagonists & inhibitors , Plaque, Atherosclerotic/drug therapy , Pyrimidinones/pharmacology , Animals , Atherosclerosis/enzymology , Atherosclerosis/genetics , Atherosclerosis/pathology , Macrophages/pathology , Mice , Mice, Knockout , Peroxidase/genetics , Peroxidase/metabolism , Plaque, Atherosclerotic/enzymology , Plaque, Atherosclerotic/genetics , Plaque, Atherosclerotic/pathology , Receptors, LDL/deficiency , Receptors, LDL/metabolism
17.
Mol Cell Biol ; 25(18): 7966-75, 2005 Sep.
Article in English | MEDLINE | ID: mdl-16135789

ABSTRACT

The nuclear functions of NF-kappaB p50/RelA heterodimers are regulated in part by posttranslational modifications of its RelA subunit, including phosphorylation and acetylation. Acetylation at lysines 218, 221, and 310 differentially regulates RelA's DNA binding activity, assembly with IkappaBalpha, and transcriptional activity. However, it remains unclear whether the acetylation is regulated or simply due to stimulus-coupled nuclear translocation of NF-kappaB. Using anti-acetylated lysine 310 RelA antibodies, we detected p300-mediated acetylation of RelA in vitro and in vivo after stimulation of cells with tumor necrosis factor alpha (TNF-alpha). Coexpression of catalytically inactive mutants of the catalytic subunit of protein kinase A/mitogen- and stress-activated kinase 1 or IKK1/IKK2, which phosphorylate RelA on serine 276 or serine 536, respectively, sharply inhibited RelA acetylation on lysine 310. Furthermore, phosphorylation of RelA on serine 276 or serine 536 increased assembly of phospho-RelA with p300, which enhanced acetylation on lysine 310. Reconstitution of RelA-deficient murine embryonic fibroblasts with RelA S276A or RelA S536A decreased TNF-alpha-induced acetylation of lysine 310 and expression of the endogenous NF-kappaB-responsive E-selectin gene. These findings indicate that the acetylation of RelA at lysine 310 is importantly regulated by prior phosphorylation of serines 276 and 536. Such phosphorylated and acetylated forms of RelA display enhanced transcriptional activity.


Subject(s)
NF-kappa B/metabolism , Nuclear Proteins/metabolism , Trans-Activators/metabolism , Transcription, Genetic , Acetylation , Animals , Cells, Cultured , E1A-Associated p300 Protein , Humans , Lysine/metabolism , Mice , Mutation , NF-kappa B/genetics , Phosphorylation , Serine/metabolism , Transcription Factor RelA
18.
Bioorg Med Chem Lett ; 18(23): 6071-7, 2008 Dec 01.
Article in English | MEDLINE | ID: mdl-18951788

ABSTRACT

The synthesis and SAR for a series of diaminopyrimidines as PYK2 inhibitors are described. Using a combination of library and traditional medicinal chemistry techniques, a FAK-selective chemical series was transformed into compounds possessing good PYK2 potency and 10- to 20-fold selectivity against FAK. Subsequent studies found that the majority of the compounds were positive in a reactive metabolite assay, an indicator for potential toxicological liabilities. Based on the proposed mechanism for bioactivation, as well as a combination of structure-based drug design and traditional medicinal chemistry techniques, a follow-up series of PYK2 inhibitors was identified that maintained PYK2 potency, FAK selectivity and HLM stability, yet were negative in the RM assay.


Subject(s)
Focal Adhesion Kinase 2/antagonists & inhibitors , Pyrimidines/chemical synthesis , Pyrimidines/pharmacology , Animals , Combinatorial Chemistry Techniques , Crystallography, X-Ray , Disease Models, Animal , Drug Design , Focal Adhesion Protein-Tyrosine Kinases/antagonists & inhibitors , Humans , Molecular Conformation , Molecular Structure , Osteoporosis/drug therapy , Pyrimidines/chemistry , Rats , Structure-Activity Relationship
19.
J Med Chem ; 61(7): 3114-3125, 2018 04 12.
Article in English | MEDLINE | ID: mdl-29570292

ABSTRACT

Studies have linked the serine-threonine kinase MAP4K4 to the regulation of a number of biological processes and/or diseases, including diabetes, cancer, inflammation, and angiogenesis. With a majority of the members of our lead series (e.g., 1) suffering from time-dependent inhibition (TDI) of CYP3A4, we sought design avenues that would eliminate this risk. One such approach arose from the observation that carboxylic acid-based intermediates employed in our discovery efforts retained high MAP4K4 inhibitory potency and were devoid of the TDI risk. The medicinal chemistry effort that led to the discovery of this central nervous system-impaired inhibitor together with its preclinical safety profile is described.


Subject(s)
Aminopyridines/chemical synthesis , Aminopyridines/pharmacology , Intracellular Signaling Peptides and Proteins/antagonists & inhibitors , Protein Kinase Inhibitors/chemical synthesis , Protein Kinase Inhibitors/pharmacology , Protein Serine-Threonine Kinases/antagonists & inhibitors , Aminopyridines/adverse effects , Animals , Biological Availability , Carboxylic Acids/chemistry , Cytochrome P-450 CYP3A Inhibitors/chemical synthesis , Cytochrome P-450 CYP3A Inhibitors/pharmacology , Drug Discovery , Half-Life , Lipopolysaccharides/pharmacology , Male , Mice , Mice, Inbred C57BL , Models, Molecular , Molecular Conformation , Protein Kinase Inhibitors/adverse effects , Rats , Rats, Wistar , Structure-Activity Relationship , Tumor Necrosis Factor-alpha/blood
20.
JACC Basic Transl Sci ; 1(7): 633-643, 2016 Dec.
Article in English | MEDLINE | ID: mdl-30167547

ABSTRACT

PF-1355 is an oral myeloperoxidase (MPO) inhibitor that successfully decreased elevated MPO activity in mouse myocardial infarction models. Short duration PF-1355 treatment for 7 days decreased the number of inflammatory cells and attenuated left ventricular dilation. Cardiac function and remodeling improved when treatment was increased to 21 days. Better therapeutic effect was further achieved with early compared with delayed treatment initiation (1 h vs. 24 h after infarction). In conclusion, PF-1355 treatment protected a mouse heart from acute and chronic effects of MI, and this study paves the way for future translational studies investigating this class of drugs in cardiovascular diseases.

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