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1.
Proc Natl Acad Sci U S A ; 119(5)2022 02 01.
Article in English | MEDLINE | ID: mdl-35091471

ABSTRACT

We report two structures of the human voltage-gated potassium channel (Kv) Kv1.3 in immune cells alone (apo-Kv1.3) and bound to an immunomodulatory drug called dalazatide (dalazatide-Kv1.3). Both the apo-Kv1.3 and dalazatide-Kv1.3 structures are in an activated state based on their depolarized voltage sensor and open inner gate. In apo-Kv1.3, the aromatic residue in the signature sequence (Y447) adopts a position that diverges 11 Å from other K+ channels. The outer pore is significantly rearranged, causing widening of the selectivity filter and perturbation of ion binding within the filter. This conformation is stabilized by a network of intrasubunit hydrogen bonds. In dalazatide-Kv1.3, binding of dalazatide to the channel's outer vestibule narrows the selectivity filter, Y447 occupies a position seen in other K+ channels, and this conformation is stabilized by a network of intersubunit hydrogen bonds. These remarkable rearrangements in the selectivity filter underlie Kv1.3's transition into the drug-blocked state.


Subject(s)
Kv1.3 Potassium Channel/metabolism , Kv1.3 Potassium Channel/ultrastructure , Amino Acid Sequence/genetics , Binding Sites/physiology , Humans , Ion Channel Gating/physiology , Kv1.3 Potassium Channel/drug effects , Membrane Potentials , Microscopy, Electron/methods , Models, Molecular , Molecular Conformation , Potassium/metabolism , Potassium Channels/metabolism , Potassium Channels/ultrastructure , Potassium Channels, Voltage-Gated/metabolism , Potassium Channels, Voltage-Gated/ultrastructure , Sequence Alignment/methods
2.
J Chem Inf Model ; 63(10): 3043-3053, 2023 05 22.
Article in English | MEDLINE | ID: mdl-37143234

ABSTRACT

Peptide toxins that adopt the ShK fold can inhibit the voltage-gated potassium channel KV1.3 with IC50 values in the pM range and are therefore potential leads for drugs targeting autoimmune and neuroinflammatory diseases. Nuclear magnetic resonance (NMR) relaxation measurements and pressure-dependent NMR have shown that, despite being cross-linked by disulfide bonds, ShK itself is flexible in solution. This flexibility affects the local structure around the pharmacophore for the KV1.3 channel blockade and, in particular, the relative orientation of the key Lys and Tyr side chains (Lys22 and Tyr23 in ShK) and has implications for the design of KV1.3 inhibitors. In this study, we have performed molecular dynamics (MD) simulations on ShK and a close homologue, HmK, to probe the conformational space occupied by the Lys and Tyr residues, and docked the different conformations with a recently determined cryo-EM structure of the KV1.3 channel. Although ShK and HmK have 60% sequence identity, their dynamic behaviors are quite different, with ShK sampling a broad range of conformations over the course of a 5 µs MD simulation, while HmK is relatively rigid. We also investigated the importance of conformational dynamics, in particular the distance between the side chains of the key dyad Lys22 and Tyr23, for binding to KV1.3. Although these peptides have quite different dynamics, the dyad in both adopts a similar configuration upon binding, revealing a conformational selection upon binding to KV1.3 in the case of ShK. Both peptides bind to KV1.3 with Lys22 occupying the pore of the channel. Intriguingly, the more flexible peptide, ShK, binds with significantly higher affinity than HmK.


Subject(s)
Cnidarian Venoms , Sea Anemones , Animals , Kv1.3 Potassium Channel/chemistry , Kv1.3 Potassium Channel/metabolism , Cnidarian Venoms/chemistry , Cnidarian Venoms/metabolism , Cnidarian Venoms/pharmacology , Sea Anemones/chemistry , Sea Anemones/metabolism , Peptides/chemistry , Molecular Conformation , Potassium Channel Blockers/pharmacology , Potassium Channel Blockers/chemistry , Kv1.2 Potassium Channel/metabolism
3.
Nat Prod Rep ; 37(5): 703-716, 2020 05 01.
Article in English | MEDLINE | ID: mdl-32065187

ABSTRACT

Covering: Up to 2020Ion channels are a vast super-family of membrane proteins that play critical physiological roles in excitable and non-excitable cells. Their biomedical importance makes them valuable and attractive drug targets for neurological, cardiovascular, gastrointestinal and metabolic diseases, and for cancer therapy and immune modulation. Current therapeutics target only a minor subset of ion channels, leaving a large unexploited space within the ion channel field. Natural products harnessed from the almost unlimited and diverse universe of compounds within the bioenvironment have been used to modulate channels for decades. In this review we highlight the impact made by natural products on ion channel pharmacology, specifically on K+, NaV and CaV channels, and use case studies to describe the development of ion channel-modulating drugs from natural sources for the treatment of pain, heart disease and autoimmune diseases.


Subject(s)
Biological Products/pharmacology , Ion Channels/metabolism , Animals , Autoimmune Diseases/drug therapy , Biological Products/chemistry , Heart Diseases/drug therapy , Humans , Ion Channels/antagonists & inhibitors , Ion Channels/chemistry , Molecular Targeted Therapy , Pain, Intractable/drug therapy
4.
Pharmacol Rev ; 69(1): 1-11, 2017 01.
Article in English | MEDLINE | ID: mdl-28267675

ABSTRACT

A subset of potassium channels is regulated primarily by changes in the cytoplasmic concentration of ions, including calcium, sodium, chloride, and protons. The eight members of this subfamily were originally all designated as calcium-activated channels. More recent studies have clarified the gating mechanisms for these channels and have documented that not all members are sensitive to calcium. This article describes the molecular relationships between these channels and provides an introduction to their functional properties. It also introduces a new nomenclature that differentiates between calcium- and sodium-activated potassium channels.


Subject(s)
Calcium/metabolism , Chlorides/metabolism , Ion Channel Gating , Potassium Channels, Calcium-Activated/classification , Potassium Channels, Calcium-Activated/metabolism , Potassium Channels/classification , Potassium Channels/metabolism , Sodium/metabolism , Terminology as Topic , Animals , Humans , Intermediate-Conductance Calcium-Activated Potassium Channels/classification , Intermediate-Conductance Calcium-Activated Potassium Channels/metabolism , Large-Conductance Calcium-Activated Potassium Channel alpha Subunits/classification , Large-Conductance Calcium-Activated Potassium Channel alpha Subunits/metabolism , Male , Spermatozoa/metabolism
5.
Br J Cancer ; 118(2): 200-212, 2018 01.
Article in English | MEDLINE | ID: mdl-29161243

ABSTRACT

BACKGROUND: Platinum-based drugs such as Cisplatin are commonly employed for cancer treatment. Despite an initial therapeutic response, Cisplatin treatment often results in the development of chemoresistance. To identify novel approaches to overcome Cisplatin resistance, we tested Cisplatin in combination with K+ channel modulators on colorectal cancer (CRC) cells. METHODS: The functional expression of Ca2+-activated (KCa3.1, also known as KCNN4) and voltage-dependent (Kv11.1, also known as KCNH2 or hERG1) K+ channels was determined in two CRC cell lines (HCT-116 and HCT-8) by molecular and electrophysiological techniques. Cisplatin and several K+ channel modulators were tested in vitro for their action on K+ currents, cell vitality, apoptosis, cell cycle, proliferation, intracellular signalling and Platinum uptake. These effects were also analysed in a mouse model mimicking Cisplatin resistance. RESULTS: Cisplatin-resistant CRC cells expressed higher levels of KCa3.1 and Kv11.1 channels, compared with Cisplatin-sensitive CRC cells. In resistant cells, KCa3.1 activators (SKA-31) and Kv11.1 inhibitors (E4031) had a synergistic action with Cisplatin in triggering apoptosis and inhibiting proliferation. The effect was maximal when KCa3.1 activation and Kv11.1 inhibition were combined. In fact, similar results were produced by Riluzole, which is able to both activate KCa3.1 and inhibit Kv11.1. Cisplatin uptake into resistant cells depended on KCa3.1 channel activity, as it was potentiated by KCa3.1 activators. Kv11.1 blockade led to increased KCa3.1 expression and thereby stimulated Cisplatin uptake. Finally, the combined administration of a KCa3.1 activator and a Kv11.1 inhibitor also overcame Cisplatin resistance in vivo. CONCLUSIONS: As Riluzole, an activator of KCa3.1 and inhibitor of Kv11.1 channels, is in clinical use, our results suggest that this compound may be useful in the clinic to improve Cisplatin efficacy and overcome Cisplatin resistance in CRC.


Subject(s)
Cisplatin/pharmacology , Colorectal Neoplasms/drug therapy , Colorectal Neoplasms/metabolism , ERG1 Potassium Channel/antagonists & inhibitors , Intermediate-Conductance Calcium-Activated Potassium Channels/metabolism , Animals , Apoptosis/drug effects , Benzothiazoles/pharmacology , Cell Cycle/drug effects , Cell Line, Tumor , Cell Survival/drug effects , Cisplatin/pharmacokinetics , Colorectal Neoplasms/pathology , Drug Resistance, Neoplasm , Drug Synergism , ERG1 Potassium Channel/metabolism , HCT116 Cells , HT29 Cells , Humans , Inhibitory Concentration 50 , Mice , Potassium Channel Blockers/pharmacology , Pyrazoles/pharmacology , Riluzole/pharmacology
6.
Immunity ; 29(4): 602-14, 2008 Oct 17.
Article in English | MEDLINE | ID: mdl-18835197

ABSTRACT

Effector memory T (Tem) cells are essential mediators of autoimmune disease and delayed-type hypersensitivity (DTH), a convenient model for two-photon imaging of Tem cell participation in an inflammatory response. Shortly (3 hr) after entry into antigen-primed ear tissue, Tem cells stably attached to antigen-bearing antigen-presenting cells (APCs). After 24 hr, enlarged Tem cells were highly motile along collagen fibers and continued to migrate rapidly for 18 hr. Tem cells rely on voltage-gated Kv1.3 potassium channels to regulate calcium signaling. ShK-186, a specific Kv1.3 blocker, inhibited DTH and suppressed Tem cell enlargement and motility in inflamed tissue but had no effect on homing to or motility in lymph nodes of naive and central memory T (Tcm) cells. ShK-186 effectively treated disease in a rat model of multiple sclerosis. These results demonstrate a requirement for Kv1.3 channels in Tem cells during an inflammatory immune response in peripheral tissues. Targeting Kv1.3 allows for effector memory responses to be suppressed while central memory responses remain intact.


Subject(s)
Antigen-Presenting Cells/immunology , Hypersensitivity, Delayed/immunology , Immunologic Memory , Kv1.3 Potassium Channel/antagonists & inhibitors , Potassium Channel Blockers/pharmacology , T-Lymphocytes/immunology , Animals , Antigen-Presenting Cells/metabolism , Cell Movement/drug effects , Chlamydia Infections/drug therapy , Chlamydia Infections/immunology , Chlamydia trachomatis/immunology , Collagen , Encephalomyelitis, Autoimmune, Experimental/drug therapy , Encephalomyelitis, Autoimmune, Experimental/immunology , Female , Hypersensitivity, Delayed/metabolism , Immunologic Memory/drug effects , Kv1.3 Potassium Channel/metabolism , Lymph Nodes/cytology , Lymph Nodes/immunology , Lymphocyte Activation/drug effects , Orthomyxoviridae/immunology , Orthomyxoviridae Infections/drug therapy , Orthomyxoviridae Infections/immunology , Ovalbumin/immunology , Potassium Channel Blockers/administration & dosage , Potassium Channel Blockers/therapeutic use , Proteins/pharmacology , Rats , Rats, Inbred Lew , Receptors, CCR7/immunology , T-Lymphocytes/drug effects , T-Lymphocytes/metabolism
7.
Nature ; 537(7621): 497-499, 2016 09 22.
Article in English | MEDLINE | ID: mdl-27626384
8.
Proc Natl Acad Sci U S A ; 110(24): E2239-48, 2013 Jun 11.
Article in English | MEDLINE | ID: mdl-23729813

ABSTRACT

Obesity is an epidemic, calling for innovative and reliable pharmacological strategies. Here, we show that ShK-186, a selective and potent blocker of the voltage-gated Kv1.3 channel, counteracts the negative effects of increased caloric intake in mice fed a diet rich in fat and fructose. ShK-186 reduced weight gain, adiposity, and fatty liver; decreased blood levels of cholesterol, sugar, HbA1c, insulin, and leptin; and enhanced peripheral insulin sensitivity. These changes mimic the effects of Kv1.3 gene deletion. ShK-186 did not alter weight gain in mice on a chow diet, suggesting that the obesity-inducing diet enhances sensitivity to Kv1.3 blockade. Several mechanisms may contribute to the therapeutic benefits of ShK-186. ShK-186 therapy activated brown adipose tissue as evidenced by a doubling of glucose uptake, and increased ß-oxidation of fatty acids, glycolysis, fatty acid synthesis, and uncoupling protein 1 expression. Activation of brown adipose tissue manifested as augmented oxygen consumption and energy expenditure, with no change in caloric intake, locomotor activity, or thyroid hormone levels. The obesity diet induced Kv1.3 expression in the liver, and ShK-186 caused profound alterations in energy and lipid metabolism in the liver. This action on the liver may underlie the differential effectiveness of ShK-186 in mice fed a chow vs. an obesity diet. Our results highlight the potential use of Kv1.3 blockers for the treatment of obesity and insulin resistance.


Subject(s)
Insulin Resistance , Kv1.3 Potassium Channel/antagonists & inhibitors , Obesity/prevention & control , Proteins/pharmacology , Adipose Tissue, Brown/drug effects , Adipose Tissue, Brown/metabolism , Adiposity/drug effects , Animals , Blood Glucose/metabolism , Diet , Energy Intake/drug effects , Energy Metabolism/drug effects , Fatty Liver/metabolism , Fatty Liver/physiopathology , Fatty Liver/prevention & control , Kv1.3 Potassium Channel/genetics , Kv1.3 Potassium Channel/physiology , Leptin/blood , Lipids/blood , Liver/drug effects , Liver/metabolism , Liver/pathology , Male , Mice , Mice, Inbred C57BL , Motor Activity/drug effects , Obesity/genetics , Obesity/physiopathology , Oxygen Consumption/drug effects , Weight Gain/drug effects
9.
FASEB J ; 28(9): 3952-64, 2014 Sep.
Article in English | MEDLINE | ID: mdl-24891519

ABSTRACT

The voltage-gated potassium (Kv) 1.3 channel is widely regarded as a therapeutic target for immunomodulation in autoimmune diseases. ShK-186, a selective inhibitor of Kv1.3 channels, ameliorates autoimmune diseases in rodent models, and human phase 1 trials of this agent in healthy volunteers have been completed. In this study, we identified and characterized a large family of Stichodactyla helianthus toxin (ShK)-related peptides in parasitic worms. Based on phylogenetic analysis, 2 worm peptides were selected for study: AcK1, a 51-residue peptide expressed in the anterior secretory glands of the dog-infecting hookworm Ancylostoma caninum and the human-infecting hookworm Ancylostoma ceylanicum, and BmK1, the C-terminal domain of a metalloprotease from the filarial worm Brugia malayi. These peptides in solution adopt helical structures closely resembling that of ShK. At doses in the nanomolar-micromolar range, they block native Kv1.3 in human T cells and cloned Kv1.3 stably expressed in L929 mouse fibroblasts. They preferentially suppress the proliferation of rat CCR7(-) effector memory T cells without affecting naive and central memory subsets and inhibit the delayed-type hypersensitivity (DTH) response caused by skin-homing effector memory T cells in rats. Further, they suppress IFNγ production by human T lymphocytes. ShK-related peptides in parasitic worms may contribute to the potential beneficial effects of probiotic parasitic worm therapy in human autoimmune diseases.


Subject(s)
Autoimmune Diseases/prevention & control , Cnidarian Venoms/chemistry , Helminths/metabolism , Immunologic Memory/drug effects , Kv1.3 Potassium Channel/antagonists & inhibitors , Peptide Fragments/pharmacology , Potassium Channel Blockers/pharmacology , T-Lymphocytes/drug effects , Amino Acid Sequence , Animals , Cell Proliferation , Cells, Cultured , Cytokines/metabolism , Electrophysiology , Female , Fibroblasts/drug effects , Fibroblasts/immunology , Fibroblasts/metabolism , Humans , Hypersensitivity, Delayed/prevention & control , Magnetic Resonance Spectroscopy , Male , Mice , Models, Molecular , Molecular Sequence Data , Peptide Fragments/chemistry , Phylogeny , Protein Conformation , Rats , Rats, Inbred Lew , Receptors, CCR7/metabolism , Sequence Homology, Amino Acid , Structure-Activity Relationship , T-Lymphocytes/immunology , T-Lymphocytes/metabolism
10.
Proc Natl Acad Sci U S A ; 109(45): 18577-82, 2012 Nov 06.
Article in English | MEDLINE | ID: mdl-23090990

ABSTRACT

Voltage-gated sodium (Na(V)) and potassium (K(V)) channels are critical components of neuronal action potential generation and propagation. Here, we report that Na(V)ß1 encoded by SCN1b, an integral subunit of Na(V) channels, coassembles with and modulates the biophysical properties of K(V)1 and K(V)7 channels, but not K(V)3 channels, in an isoform-specific manner. Distinct domains of Na(V)ß1 are involved in modulation of the different K(V) channels. Studies with channel chimeras demonstrate that Na(V)ß1-mediated changes in activation kinetics and voltage dependence of activation require interaction of Na(V)ß1 with the channel's voltage-sensing domain, whereas changes in inactivation and deactivation require interaction with the channel's pore domain. A molecular model based on docking studies shows Na(V)ß1 lying in the crevice between the voltage-sensing and pore domains of K(V) channels, making significant contacts with the S1 and S5 segments. Cross-modulation of Na(V) and K(V) channels by Na(V)ß1 may promote diversity and flexibility in the overall control of cellular excitability and signaling.


Subject(s)
Potassium Channels, Voltage-Gated/metabolism , Voltage-Gated Sodium Channel beta-1 Subunit/metabolism , Animals , CHO Cells , Cricetinae , Cricetulus , Ion Channel Gating , Kinetics , Mice , Models, Molecular , PC12 Cells , Potassium Channels, Voltage-Gated/chemistry , Protein Binding , Protein Structure, Tertiary , Rats , Xenopus
11.
J Neurosci ; 33(41): 16310-22, 2013 Oct 09.
Article in English | MEDLINE | ID: mdl-24107962

ABSTRACT

The molecular targets and neural circuits that underlie general anesthesia are not fully elucidated. Here, we directly demonstrate that Kv1-family (Shaker-related) delayed rectifier K(+) channels in the central medial thalamic nucleus (CMT) are important targets for volatile anesthetics. The modulation of Kv1 channels by volatiles is network specific as microinfusion of ShK, a potent inhibitor of Kv1.1, Kv1.3, and Kv1.6 channels, into the CMT awakened sevoflurane-anesthetized rodents. In heterologous expression systems, sevoflurane, isoflurane, and desflurane at subsurgical concentrations potentiated delayed rectifier Kv1 channels at low depolarizing potentials. In mouse thalamic brain slices, sevoflurane inhibited firing frequency and delayed the onset of action potentials in CMT neurons, and ShK-186, a Kv1.3-selective inhibitor, prevented these effects. Our findings demonstrate the exquisite sensitivity of delayed rectifier Kv1 channels to modulation by volatile anesthetics and highlight an arousal suppressing role of Kv1 channels in CMT neurons during the process of anesthesia.


Subject(s)
Anesthetics, General/pharmacology , Arousal/drug effects , Intralaminar Thalamic Nuclei/drug effects , Shaker Superfamily of Potassium Channels/drug effects , Action Potentials/drug effects , Animals , Desflurane , Intralaminar Thalamic Nuclei/metabolism , Isoflurane/analogs & derivatives , Isoflurane/pharmacology , Magnetic Resonance Spectroscopy , Male , Methyl Ethers/pharmacology , Mice , Mice, Inbred C57BL , Patch-Clamp Techniques , Rats , Rats, Sprague-Dawley , Sevoflurane , Shaker Superfamily of Potassium Channels/metabolism , Volatile Organic Compounds/pharmacology
12.
J Biol Chem ; 288(9): 6451-64, 2013 Mar 01.
Article in English | MEDLINE | ID: mdl-23300077

ABSTRACT

Matrix metalloproteases (MMPs) are endopeptidases that regulate diverse biological processes. Synthesized as zymogens, MMPs become active after removal of their prodomains. Much is known about the metalloprotease activity of these enzymes, but noncanonical functions are poorly defined, and functions of the prodomains have been largely ignored. Here we report a novel metalloprotease-independent, channel-modulating function for the prodomain of MMP23 (MMP23-PD). Whole-cell patch clamping and confocal microscopy, coupled with deletion analysis, demonstrate that MMP23-PD suppresses the voltage-gated potassium channel KV1.3, but not the closely related KV1.2 channel, by trapping the channel intracellularly. Studies with KV1.2-1.3 chimeras suggest that MMP23-PD requires the presence of the KV1.3 region from the S5 trans-membrane segment to the C terminus to modulate KV1.3 channel function. NMR studies of MMP23-PD reveal a single, kinked trans-membrane α-helix, joined by a short linker to a juxtamembrane α-helix, which is associated with the surface of the membrane and protected from exchange with the solvent. The topological similarity of MMP23-PD to KCNE1, KCNE2, and KCNE4 proteins that trap KV1.3, KV1.4, KV3.3, and KV3.4 channels early in the secretory pathway suggests a shared mechanism of channel regulation. MMP23 and KV1.3 expression is enhanced and overlapping in colorectal cancers where the interaction of the two proteins could affect cell function.


Subject(s)
Ion Channel Gating/physiology , Kv1.3 Potassium Channel/metabolism , Metalloendopeptidases/metabolism , Animals , COS Cells , Colorectal Neoplasms/genetics , Colorectal Neoplasms/metabolism , Gene Expression Regulation, Neoplastic/genetics , Humans , Kv1.2 Potassium Channel/genetics , Kv1.2 Potassium Channel/metabolism , Kv1.3 Potassium Channel/genetics , Metalloendopeptidases/genetics , Neoplasm Proteins/genetics , Neoplasm Proteins/metabolism , Patch-Clamp Techniques , Protein Structure, Secondary , Protein Structure, Tertiary , Protein Transport/physiology
13.
J Immunol ; 188(12): 5877-86, 2012 Jun 15.
Article in English | MEDLINE | ID: mdl-22581856

ABSTRACT

Increasing evidence suggests ion channels have critical functions in the differentiation and plasticity of T cells. Kv1.3, a voltage-gated K(+) channel, is a functional marker and a pharmacological target for activated effector memory T cells. Selective Kv1.3 blockers have been shown to inhibit proliferation and cytokine production by human and rat effector memory T cells. We used Kv1.3 knockout (KO) mice to investigate the mechanism by which Kv1.3 blockade affects CD4(+) T cell differentiation during an inflammatory immune-mediated disease. Kv1.3 KO animals displayed significantly lower incidence and severity of myelin oligodendrocyte glycoprotein (MOG) peptide-induced experimental autoimmune encephalomyelitis. Kv1.3 was the only K(V) channel expressed in MOG 35-55-specific CD4(+) T cell blasts, and no K(V) current was present in MOG-specific CD4(+) T cell-blasts from Kv1.3 KO mice. Fewer CD4(+) T cells migrated to the CNS in Kv1.3 KO mice following disease induction, and Ag-specific proliferation of CD4(+) T cells from these mice was impaired with a corresponding cell-cycle delay. Kv1.3 was required for optimal expression of IFN-γ and IL-17, whereas its absence led to increased IL-10 production. Dendritic cells from Kv1.3 KO mice fully activated wild-type CD4(+) T cells, indicating a T cell-intrinsic defect in Kv1.3 KO mice. The loss of Kv1.3 led to a suppressive phenotype, which may contribute to the mechanism by which deletion of Kv1.3 produces an immunotherapeutic effect. Skewing of CD4(+) T cell differentiation toward Ag-specific regulatory T cells by pharmacological blockade or genetic suppression of Kv1.3 might be beneficial for therapy of immune-mediated diseases such as multiple sclerosis.


Subject(s)
Encephalomyelitis, Autoimmune, Experimental/immunology , Encephalomyelitis, Autoimmune, Experimental/metabolism , Kv1.3 Potassium Channel/metabolism , Lymphocyte Activation/immunology , T-Lymphocytes, Regulatory/immunology , Animals , Blotting, Western , CD4-Positive T-Lymphocytes/cytology , CD4-Positive T-Lymphocytes/immunology , Cell Differentiation/immunology , Electrophysiology , Encephalomyelitis, Autoimmune, Experimental/pathology , Enzyme-Linked Immunosorbent Assay , Female , Flow Cytometry , Mice , Mice, Inbred C57BL , Mice, Knockout , Mice, Transgenic , Phenotype , T-Lymphocyte Subsets/cytology , T-Lymphocyte Subsets/immunology , T-Lymphocytes, Regulatory/cytology
14.
Nat Commun ; 15(1): 2113, 2024 Mar 08.
Article in English | MEDLINE | ID: mdl-38459052

ABSTRACT

Macrophages are abundant immune cells in the microenvironment of diffuse large B-cell lymphoma (DLBCL). Macrophage estimation by immunohistochemistry shows varying prognostic significance across studies in DLBCL, and does not provide a comprehensive analysis of macrophage subtypes. Here, using digital spatial profiling with whole transcriptome analysis of CD68+ cells, we characterize macrophages in distinct spatial niches of reactive lymphoid tissues (RLTs) and DLBCL. We reveal transcriptomic differences between macrophages within RLTs (light zone /dark zone, germinal center/ interfollicular), and between disease states (RLTs/ DLBCL), which we then use to generate six spatially-derived macrophage signatures (MacroSigs). We proceed to interrogate these MacroSigs in macrophage and DLBCL single-cell RNA-sequencing datasets, and in gene-expression data from multiple DLBCL cohorts. We show that specific MacroSigs are associated with cell-of-origin subtypes and overall survival in DLBCL. This study provides a spatially-resolved whole-transcriptome atlas of macrophages in reactive and malignant lymphoid tissues, showing biological and clinical significance.


Subject(s)
Lymphoma, Large B-Cell, Diffuse , Humans , Prognosis , Lymphoma, Large B-Cell, Diffuse/pathology , Gene Expression Profiling , Transcriptome , Germinal Center/pathology , Tumor Microenvironment/genetics
15.
Immunol Rev ; 231(1): 59-87, 2009 Sep.
Article in English | MEDLINE | ID: mdl-19754890

ABSTRACT

For more than 25 years, it has been widely appreciated that Ca2+ influx is essential to trigger T-lymphocyte activation. Patch clamp analysis, molecular identification, and functional studies using blockers and genetic manipulation have shown that a unique contingent of ion channels orchestrates the initiation, intensity, and duration of the Ca2+ signal. Five distinct types of ion channels--Kv1.3, KCa3.1, Orai1+ stromal interacting molecule 1 (STIM1) [Ca2+-release activating Ca2+ (CRAC) channel], TRPM7, and Cl(swell)--comprise a network that performs functions vital for ongoing cellular homeostasis and for T-cell activation, offering potential targets for immunomodulation. Most recently, the roles of STIM1 and Orai1 have been revealed in triggering and forming the CRAC channel following T-cell receptor engagement. Kv1.3, KCa3.1, STIM1, and Orai1 have been found to cluster at the immunological synapse following contact with an antigen-presenting cell; we discuss how channels at the synapse might function to modulate local signaling. Immuno-imaging approaches are beginning to shed light on ion channel function in vivo. Importantly, the expression pattern of Ca2+ and K+ channels and hence the functional network can adapt depending upon the state of differentiation and activation, and this allows for different stages of an immune response to be targeted specifically.


Subject(s)
Ion Channels/metabolism , T-Lymphocytes/immunology , T-Lymphocytes/metabolism , Animals , Autoimmune Diseases/immunology , Autoimmune Diseases/metabolism , Autoimmune Diseases/therapy , Calcium Signaling , Cell Movement , Humans , Ion Channels/chemistry , Lymphocyte Activation , T-Lymphocytes/chemistry , T-Lymphocytes/cytology
16.
Channels (Austin) ; 17(1): 2253104, 2023 12.
Article in English | MEDLINE | ID: mdl-37695839

ABSTRACT

The voltage-gated potassium channel KV1.3 is an important therapeutic target for the treatment of autoimmune and neuroinflammatory diseases. The recent structures of KV1.3, Shaker-IR (wild-type and inactivating W434F mutant) and an inactivating mutant of rat KV1.2-KV2.1 paddle chimera (KVChim-W362F+S367T+V377T) reveal that the transition of voltage-gated potassium channels from the open-conducting conformation into the non-conducting inactivated conformation involves the rupture of a key intra-subunit hydrogen bond that tethers the selectivity filter to the pore helix. Breakage of this bond allows the side chains of residues at the external end of the selectivity filter (Tyr447 and Asp449 in KV1.3) to rotate outwards, dilating the outer pore and disrupting ion permeation. Binding of the peptide dalazatide (ShK-186) and an antibody-ShK fusion to the external vestibule of KV1.3 narrows and stabilizes the selectivity filter in the open-conducting conformation, although K+ efflux is blocked by the peptide occluding the pore through the interaction of ShK-Lys22 with the backbone carbonyl of KV1.3-Tyr447 in the selectivity filter. Electrophysiological studies on ShK and the closely-related peptide HmK show that ShK blocks KV1.3 with significantly higher potency, even though molecular dynamics simulations show that ShK is more flexible than HmK. Binding of the anti-KV1.3 nanobody A0194009G09 to the turret and residues in the external loops of the voltage-sensing domain enhances the dilation of the outer selectivity filter in an exaggerated inactivated conformation. These studies lay the foundation to further define the mechanism of slow inactivation in KV channels and can help guide the development of future KV1.3-targeted immuno-therapeutics.


Subject(s)
Molecular Dynamics Simulation , Potassium Channels, Voltage-Gated , Animals , Rats , Biological Transport , Cell Line , Molecular Conformation
17.
J Pharmacol Exp Ther ; 342(3): 642-53, 2012 Sep.
Article in English | MEDLINE | ID: mdl-22637724

ABSTRACT

The Kv1.3 channel is a recognized target for pharmaceutical development to treat autoimmune diseases and organ rejection. ShK-186, a specific peptide inhibitor of Kv1.3, has shown promise in animal models of multiple sclerosis and rheumatoid arthritis. Here, we describe the pharmacokinetic-pharmacodynamic relationship for ShK-186 in rats and monkeys. The pharmacokinetic profile of ShK-186 was evaluated with a validated high-performance liquid chromatography-tandem mass spectrometry method to measure the peptide's concentration in plasma. These results were compared with single-photon emission computed tomography/computed tomography data collected with an ¹¹¹In-1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetic acid-conjugate of ShK-186 to assess whole-blood pharmacokinetic parameters as well as the peptide's absorption, distribution, and excretion. Analysis of these data support a model wherein ShK-186 is absorbed slowly from the injection site, resulting in blood concentrations above the Kv1.3 channel-blocking IC50 value for up to 7 days in monkeys. Pharmacodynamic studies on human peripheral blood mononuclear cells showed that brief exposure to ShK-186 resulted in sustained suppression of cytokine responses and may contribute to prolonged drug effects. In delayed-type hypersensitivity, chronic relapsing-remitting experimental autoimmune encephalomyelitis, and pristane-induced arthritis rat models, a single dose of ShK-186 every 2 to 5 days was as effective as daily administration. ShK-186's slow distribution from the injection site and its long residence time on the Kv1.3 channel contribute to the prolonged therapeutic effect of ShK-186 in animal models of autoimmune disease.


Subject(s)
Autoimmune Diseases/drug therapy , Kv1.3 Potassium Channel/antagonists & inhibitors , Proteins/pharmacology , T-Lymphocytes/drug effects , Absorption/drug effects , Absorption/immunology , Animals , Arthritis/drug therapy , Arthritis/immunology , Arthritis/metabolism , Autoimmune Diseases/immunology , Autoimmune Diseases/metabolism , Cytokines/immunology , Cytokines/metabolism , Disease Models, Animal , Dose-Response Relationship, Drug , Encephalomyelitis, Autoimmune, Experimental/drug therapy , Encephalomyelitis, Autoimmune, Experimental/immunology , Encephalomyelitis, Autoimmune, Experimental/metabolism , Female , Humans , Inhibitory Concentration 50 , Kv1.3 Potassium Channel/immunology , Kv1.3 Potassium Channel/metabolism , Leukocytes, Mononuclear/drug effects , Leukocytes, Mononuclear/immunology , Leukocytes, Mononuclear/metabolism , Macaca fascicularis , Potassium Channel Blockers/immunology , Potassium Channel Blockers/pharmacokinetics , Potassium Channel Blockers/pharmacology , Proteins/pharmacokinetics , Rats , Rats, Sprague-Dawley , Saimiri , T-Lymphocytes/immunology , T-Lymphocytes/metabolism , Tissue Distribution/drug effects , Tissue Distribution/immunology
18.
Front Pharmacol ; 13: 924289, 2022.
Article in English | MEDLINE | ID: mdl-35833027

ABSTRACT

Voltage-gated potassium (Kv) channels modulate the function of electrically-excitable and non-excitable cells by using several types of "gates" to regulate ion flow through the channels. An important gating mechanism, C-type inactivation, limits ion flow by transitioning Kv channels into a non-conducting inactivated state. Here, we highlight two recent papers, one on the human Kv1.3 channel and the second on the Drosophila Shaker Kv channel, that combined cryogenic electron microscopy and molecular dynamics simulation to define mechanisms underlying C-type inactivation. In both channels, the transition to the non-conducting inactivated conformation begins with the rupture of an intra-subunit hydrogen bond that fastens the selectivity filter to the pore helix. The freed filter swings outwards and gets tethered to an external residue. As a result, the extracellular end of the selectivity filter dilates and K+ permeation through the pore is impaired. Recovery from inactivation may entail a reversal of this process. Such a reversal, at least partially, is induced by the peptide dalazatide. Binding of dalazatide to external residues in Kv1.3 frees the filter to swing inwards. The extracellular end of the selectivity filter narrows allowing K+ to move in single file through the pore typical of conventional knock-on conduction. Inter-subunit hydrogen bonds that stabilize the outer pore in the dalazatide-bound structure are equivalent to those in open-conducting conformations of Kv channels. However, the intra-subunit bond that fastens the filter to the pore-helix is absent, suggesting an incomplete reversal of the process. These mechanisms define how Kv channels self-regulate the flow of K+ by changing the conformation of the selectivity filter.

19.
EBioMedicine ; 83: 104216, 2022 Sep.
Article in English | MEDLINE | ID: mdl-35986950

ABSTRACT

The tumour microenvironment (TME) imposes a major obstacle to infiltrating T-lymphocytes and suppresses their function. Several immune checkpoint proteins that interfere with ligand/receptor interactions and impede T-cell anti-tumour responses have been identified. Immunotherapies that block immune checkpoints have revolutionized the treatment paradigm for many patients with advanced-stage tumours. However, metabolic constraints and soluble factors that exist within the TME exacerbate the functional exhaustion of tumour-infiltrating T-cells. Here we review these multifactorial constraints and mechanisms - elevated immunosuppressive metabolites and enzymes, nutrient insufficiency, hypoxia, increased acidity, immense amounts of extracellular ATP and adenosine, dysregulated bioenergetic and purinergic signalling, and ionic imbalance - that operate in the TME and collectively suppress T-cell function. We discuss how scientific advances could help overcome the complex TME obstacles for tumour-infiltrating T-lymphocytes, aiming to stimulate further research for developing new therapeutic strategies by harnessing the full potential of the immune system in combating cancer.


Subject(s)
Neoplasms , T-Lymphocytes , Adenosine , Adenosine Triphosphate , Humans , Immune Checkpoint Proteins , Immunotherapy , Ligands , Neoplasms/pathology , Tumor Microenvironment
20.
Cancers (Basel) ; 14(5)2022 Feb 26.
Article in English | MEDLINE | ID: mdl-35267526

ABSTRACT

Immune checkpoint inhibitors have shown great promise, emerging as a new pillar of treatment for cancer; however, only a relatively small proportion of recipients show a durable response to treatment. Strategies that reliably differentiate durably-responding tumours from non-responsive tumours are a critical unmet need. Persistent and durable immunological responses are associated with the generation of memory T cells. Effector memory T cells associated with tumour response to immune therapies are characterized by substantial upregulation of the potassium channel Kv1.3 after repeated antigen stimulation. We have developed a new Kv1.3 targeting radiopharmaceutical, [18F]AlF-NOTA-KCNA3P, and evaluated whether it can reliably differentiate tumours successfully responding to immune checkpoint inhibitor (ICI) therapy targeting PD-1 alone or combined with CLTA4. In a syngeneic colon cancer model, we compared tumour retention of [18F]AlF-NOTA-KCNA3P with changes in the tumour immune microenvironment determined by flow cytometry. Imaging with [18F]AlF-NOTA-KCNA3P reliably differentiated tumours responding to ICI therapy from non-responding tumours and was associated with substantial tumour infiltration of T cells, especially Kv1.3-expressing CD8+ effector memory T cells.

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