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1.
Proc Natl Acad Sci U S A ; 113(21): E2945-54, 2016 May 24.
Article in English | MEDLINE | ID: mdl-27162353

ABSTRACT

The Wnt signaling pathways play pivotal roles in carcinogenesis. Modulation of the cell-surface abundance of Wnt receptors is emerging as an important mechanism for regulating sensitivity to Wnt ligands. Endocytosis and degradation of the Wnt receptors Frizzled (Fzd) and lipoprotein-related protein 6 (LRP6) are regulated by the E3 ubiquitin ligases zinc and ring finger 3 (ZNRF3) and ring finger protein 43 (RNF43), which are disrupted in cancer. In a genome-wide small interfering RNA screen, we identified the deubiquitylase ubiquitin-specific protease 6 (USP6) as a potent activator of Wnt signaling. USP6 enhances Wnt signaling by deubiquitylating Fzds, thereby increasing their cell-surface abundance. Chromosomal translocations in nodular fasciitis result in USP6 overexpression, leading to transcriptional activation of the Wnt/ß-catenin pathway. Inhibition of Wnt signaling using Dickkopf-1 (DKK1) or a Porcupine (PORCN) inhibitor significantly decreased the growth of USP6-driven xenograft tumors, indicating that Wnt signaling is a key target of USP6 during tumorigenesis. Our study defines an additional route to ectopic Wnt pathway activation in human disease, and identifies a potential approach to modulate Wnt signaling for therapeutic benefit.


Subject(s)
DNA-Binding Proteins/metabolism , Frizzled Receptors/metabolism , Neoplasms, Experimental/metabolism , Oncogene Proteins/metabolism , Proto-Oncogene Proteins/metabolism , Ubiquitin Thiolesterase/metabolism , Ubiquitination , Wnt Signaling Pathway , Animals , DNA-Binding Proteins/genetics , Frizzled Receptors/genetics , HEK293 Cells , HeLa Cells , Humans , Intercellular Signaling Peptides and Proteins/genetics , Intercellular Signaling Peptides and Proteins/metabolism , Low Density Lipoprotein Receptor-Related Protein-6/genetics , Low Density Lipoprotein Receptor-Related Protein-6/metabolism , Mice , Neoplasms, Experimental/genetics , Oncogene Proteins/genetics , Proto-Oncogene Proteins/genetics , Ubiquitin Thiolesterase/genetics , Ubiquitin-Protein Ligases/genetics , Ubiquitin-Protein Ligases/metabolism
2.
Mol Cell ; 36(6): 970-83, 2009 Dec 25.
Article in English | MEDLINE | ID: mdl-20064463

ABSTRACT

Mixed lineage leukemia (MLL) and its metazoan Trithorax orthologs have been linked with the epigenetic maintenance of transcriptional activity. To identify mechanisms by which MLL perpetuates active transcription in dividing cells, we investigated its role during M phase of the cell cycle. Unlike other chromatin-modifying enzymes examined, we found that MLL associates with gene promoters packaged within condensed mitotic chromosomes. Genome-wide location analysis identified a globally rearranged pattern of MLL occupancy during mitosis in a manner favoring genes that were highly transcribed during interphase. Knockdown experiments revealed that MLL retention at gene promoters during mitosis accelerates transcription reactivation following mitotic exit. MLL tethers Menin, RbBP5, and ASH2L to its occupied sites during mitosis, but is dispensable for preserving histone H3K4 methylation. These findings implicate mitotic bookmarking as a component of Trithorax-based gene regulation, which may facilitate inheritance of active gene expression states during cell division.


Subject(s)
Chromatin/metabolism , Mitosis/physiology , Myeloid-Lymphoid Leukemia Protein/metabolism , Transcriptional Activation , Animals , Chromatin/genetics , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Gene Expression Regulation , HeLa Cells , Histone-Lysine N-Methyltransferase/genetics , Histone-Lysine N-Methyltransferase/metabolism , Homeodomain Proteins/genetics , Homeodomain Proteins/metabolism , Humans , Interphase/genetics , Myeloid-Lymphoid Leukemia Protein/genetics , Neoplasm Proteins/genetics , Neoplasm Proteins/metabolism , Nuclear Proteins/genetics , Nuclear Proteins/metabolism , Promoter Regions, Genetic , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins/metabolism , RNA Interference , RNA Polymerase II/genetics , RNA Polymerase II/metabolism , Transcription Factors/genetics , Transcription Factors/metabolism
3.
Genes Chromosomes Cancer ; 55(8): 640-9, 2016 08.
Article in English | MEDLINE | ID: mdl-27113271

ABSTRACT

Nodular fasciitis (NF) is a clonal self-limited neoplastic proliferation characterized by rearrangements of the USP6 locus in most examples. To our knowledge well-documented malignant behavior has never been previously observed in NF. In this report we present an unusual case of NF with classical histologic features that showed a protracted clinical course characterized by multiple recurrences and eventual metastatic behavior over a period of 10 years. Molecular analyses revealed the presence and amplification of the novel PPPR6-USP6 gene fusion, which resulted in USP6 mRNA transcriptional upregulation. These findings further support the oncogenic role of the USP6 protease in mesenchymal neoplasia and expand the biologic potential of NF. © 2016 Wiley Periodicals, Inc.


Subject(s)
Fasciitis/genetics , Oncogene Proteins, Fusion/genetics , Phosphoprotein Phosphatases/genetics , Proto-Oncogene Proteins/genetics , Ubiquitin Thiolesterase/genetics , Adult , Carcinogenesis/genetics , Comparative Genomic Hybridization , Fasciitis/pathology , Female , Gene Expression Regulation, Neoplastic , Humans , In Situ Hybridization, Fluorescence , Neoplasm Recurrence, Local/genetics , Neoplasm Recurrence, Local/pathology , RNA, Messenger/genetics
4.
J Cell Sci ; 127(Pt 21): 4750-61, 2014 Nov 01.
Article in English | MEDLINE | ID: mdl-25179595

ABSTRACT

Plasma membrane proteins that enter cells by clathrin-independent endocytosis (CIE) are sorted either to lysosomes for degradation or recycled back to the plasma membrane. Expression of some MARCH E3 ubiquitin ligases promotes trafficking of CIE cargo proteins to lysosomes by ubiquitylating the proteins. Here, we show that co-expression of the ubiquitin-specific protease TRE17/USP6 counteracts the MARCH-dependent targeting of CIE cargo proteins, but not that of transferrin receptor, to lysosomes, leading to recovery of the stability and cell surface level of the proteins. The ubiquitylation of CIE cargo proteins by MARCH8 was reversed by TRE17, suggesting that TRE17 leads to deubiquitylation of CIE cargo proteins. The effects of TRE17 were dependent on its deubiquitylating activity and expression of TRE17 alone led to a stabilization of surface major histocompatibility complex class I (MHCI) molecules, a CIE cargo, suggesting that deubiquitylation of endogenous CIE cargo proteins promotes their stability. This study demonstrates that cycles of ubiquitylation and deubiquitylation can determine whether CIE cargo proteins are degraded or recycled.


Subject(s)
Clathrin/metabolism , Endocytosis/physiology , Proto-Oncogene Proteins/metabolism , Ubiquitin Thiolesterase/metabolism , Clathrin/genetics , Endocytosis/genetics , Fluorescent Antibody Technique , HeLa Cells , Humans , Protein Transport/genetics , Protein Transport/physiology , Proto-Oncogene Proteins/genetics , Ubiquitin Thiolesterase/genetics , Ubiquitination
5.
Mod Pathol ; 29(8): 865-9, 2016 08.
Article in English | MEDLINE | ID: mdl-27125357

ABSTRACT

Fibroma of tendon sheath is a benign (myo)fibroblastic neoplasm of the tenosynovial soft tissues, typically affecting the distal extremities. It is classically described as a paucicellular, densely collagenized tumor; however, cellular variants have been described. A subset of cellular fibromas of tendon sheath shares similar histological features with nodular fasciitis. As nodular fasciitis very frequently harbors rearrangement of ubiquitin-specific peptidase 6 (USP6), we hypothesized that cellular fibromas of tendon sheath with nodular fasciitis-like features may also contain USP6 rearrangements. Cases of fibroma of tendon sheath (n=19), including cellular (n=9) and classic (n=10) variants, were evaluated for USP6 rearrangement by fluorescence in situ hybridization studies. A subset of cases was tested for MYH9 rearrangements and MYH9-USP6 and CDH11-USP6 fusion products. Classic fibroma of tendon sheath occurred in 5 males and 5 females (median age 67 years, range 23-77 years) as soft tissue masses of the hand (n=4), finger (n=3), forearm (n=1) and foot (n=2). Cellular fibroma of tendon sheath occurred in 5 males and 4 females in a younger age group (median age 32 years, range 12-46 years) as small soft tissue masses of the finger (n=5), hand (n=3) and wrist (n=1). USP6 rearrangements were detected in 6/9 cellular fibromas of tendon sheath. Among cellular fibromas of tendon sheath with USP6 rearrangements, no MYH9 rearrangements were detected. By RT-PCR, neither the MYH9-USP6 or the CDH11-USP6 fusion products were detected in any case. Neither USP6 nor MYH9 rearrangement were detected in any classic fibroma of tendon sheath. We report for the first time the presence of USP6 rearrangements in a subset of cellular fibroma of tendon sheath. Based on the similar morphological and molecular genetic features, we suspect that a subset of cellular fibromas of tendon sheath are under-recognized examples of tenosynovial nodular fasciitis, driven by alternate USP6 fusion genes. Further investigation will delineate how these lesions should best be classified.


Subject(s)
Biomarkers, Tumor/genetics , Fasciitis/genetics , Fibroma/genetics , Gene Rearrangement , Giant Cell Tumor of Tendon Sheath/genetics , Proto-Oncogene Proteins/genetics , Soft Tissue Neoplasms/genetics , Tendons/pathology , Ubiquitin Thiolesterase/genetics , Adolescent , Adult , Aged , Cadherins/genetics , Child , Fasciitis/pathology , Female , Fibroma/pathology , Gene Fusion , Genetic Predisposition to Disease , Giant Cell Tumor of Tendon Sheath/pathology , Humans , In Situ Hybridization, Fluorescence , Male , Middle Aged , Molecular Motor Proteins/genetics , Myosin Heavy Chains/genetics , Phenotype , Soft Tissue Neoplasms/pathology , Young Adult
6.
Histopathology ; 69(6): 930-936, 2016 Dec.
Article in English | MEDLINE | ID: mdl-27454570

ABSTRACT

AIMS: Biphenotypic sinonasal sarcoma (SNS) is a locally aggressive tumour that occurs in the sinonasal region. PAX3-MAML3 has recently been identified as a recurrent fusion gene event in this entity; however, a subset of tumours harbour alternative PAX3 rearrangement without the involvement of MAML3. In this study we sought to characterize the molecular profile of a large series of cases, with a special emphasis on tumours with alternative fusions. METHODS AND RESULTS: Forty-four examples of SNS were screened by fluorescence in-situ hybridization and reverse transcription polymerase chain reaction to better characterize its molecular profile and identify potential novel fusion genes. Twenty-four were positive for PAX3-MAML3 (55%), 15 showed rearrangements of PAX3 without MAML3 involvement (34%), one showed rearrangement of MAML3 without PAX3 involvement, and four were negative for the involvement of either gene (9%). Among 15 cases with PAX3 involvement only, three were found to harbour PAX3-FOXO1. Two of these cases arose in the nasal cavities of female patients (aged 31 and 47 years), and one showed bilateral involvement of the nasal cavities of a 35-year-old male. A fourth case involved the skull base of a 47-year-old male, and was positive for PAX3-NCOA1. Patients with fusion-negative tumours were slightly older. CONCLUSION: More than half of the SNSs in this series were positive for PAX3-MAML3. However, a subset of tumours may harbour alternative PAX3 fusion genes or show no involvement of PAX3. Except for a possible weak association between age and molecular profile, the overall morphological and immunophenotypic features of all cases seem to be similar. Because of the rarity of these tumours, the impact of the molecular profile on the clinical course of these tumours remains to be determined.


Subject(s)
Paranasal Sinus Neoplasms/genetics , Sarcoma/genetics , Adult , Biomarkers, Tumor/genetics , DNA-Binding Proteins/genetics , Female , High-Throughput Nucleotide Sequencing , Humans , Immunohistochemistry , In Situ Hybridization, Fluorescence , Male , Middle Aged , Nuclear Proteins/genetics , Nuclear Receptor Coactivator 1/genetics , Oncogene Proteins, Fusion/genetics , Paired Box Transcription Factors/genetics , Reverse Transcriptase Polymerase Chain Reaction , Trans-Activators , Transcription Factors/genetics
7.
Cancer Res Commun ; 3(8): 1615-1627, 2023 08.
Article in English | MEDLINE | ID: mdl-37615015

ABSTRACT

Ewing sarcoma is a rare and deadly pediatric bone cancer for which survival rates and treatment options have stagnated for decades. Ewing sarcoma has not benefited from immunotherapy due to poor understanding of how its immune landscape is regulated. We recently reported that ubiquitin-specific protease 6 (USP6) functions as a tumor suppressor in Ewing sarcoma, and identified it as the first cell-intrinsic factor to modulate the Ewing sarcoma immune tumor microenvironment (TME). USP6 induces intratumoral infiltration and activation of multiple innate immune lineages in xenografted nude mice. Here we report that natural killer (NK) cells are essential for its tumor-inhibitory functions, as NK cell depletion reverses USP6-mediated suppression of Ewing sarcoma xenograft growth. USP6 expression in Ewing sarcoma cells directly stimulates NK cell activation and degranulation in vitro, and functions by increasing surface levels of multiple NK cell-activating ligands. USP6 also induces surface upregulation of the receptor for the apoptosis-inducing ligand tumor necrosis factor-related apoptosis-inducing ligand (TRAIL), providing an additional route for enhanced sensitivity to NK cell killing. Furthermore, USP6-expressing Ewing sarcoma and NK cells participate in a paracrine immunostimulatory feedforward loop, wherein IFNγ secreted by activated NK cells feeds back on USP6/Ewing sarcoma cells to induce synergistic expression of chemokines CXCL9 and CXCL10. Remarkably, expression of USP6 in subcutaneous Ewing sarcoma xenografts induces systemic activation and maturation of NK cells, and induces an abscopal response in which growth of distal tumors is inhibited, coincident with increased infiltration and activation of NK cells. This work reveals how USP6 reprograms the Ewing sarcoma TME to enhance antitumor immunity, and may be exploited for future therapeutic benefit. Significance: This study provides novel insights into the immunomodulatory functions of USP6, the only cancer cell-intrinsic factor demonstrated to regulate the immune TME in Ewing sarcoma. We demonstrate that USP6-mediated suppression of Ewing sarcoma tumorigenesis is dependent on NK cells. USP6 directly activates NK cell cytolytic function, inducing both intratumoral and systemic activation of NK cells in an Ewing sarcoma xenograft model.


Subject(s)
Bone Neoplasms , Neuroectodermal Tumors, Primitive, Peripheral , Sarcoma, Ewing , Humans , Animals , Mice , Intrinsic Factor , Ligands , Mice, Nude , Apoptosis Inducing Factor , Ubiquitin-Specific Proteases , Tumor Microenvironment , Ubiquitin Thiolesterase
8.
PLoS Genet ; 5(3): e1000413, 2009 Mar.
Article in English | MEDLINE | ID: mdl-19282986

ABSTRACT

One of the earliest morphogenetic processes in the development of many animals is epiboly. In the zebrafish, epiboly ensues when the animally localized blastoderm cells spread, thin over, and enclose the vegetally localized yolk. Only a few factors are known to function in this fundamental process. We identified a maternal-effect mutant, betty boop (bbp), which displays a novel defect in epiboly, wherein the blastoderm margin constricts dramatically, precisely when half of the yolk cell is covered by the blastoderm, causing the yolk cell to burst. Whole-blastoderm transplants and mRNA microinjection rescue demonstrate that Bbp functions in the yolk cell to regulate epiboly. We positionally cloned the maternal-effect bbp mutant gene and identified it as the zebrafish homolog of the serine-threonine kinase Mitogen Activated Protein Kinase Activated Protein Kinase 2, or MAPKAPK2, which was not previously known to function in embryonic development. We show that the regulation of MAPKAPK2 is conserved and p38 MAP kinase functions upstream of MAPKAPK2 in regulating epiboly in the zebrafish embryo. Dramatic alterations in calcium dynamics, together with the massive marginal constrictive force observed in bbp mutants, indicate precocious constriction of an F-actin network within the yolk cell, which first forms at 50% epiboly and regulates epiboly progression. We show that MAPKAPK2 activity and its regulator p38 MAPK function in the yolk cell to regulate the process of epiboly, identifying a new pathway regulating this cell movement process. We postulate that a p38 MAPKAPK2 kinase cascade modulates the activity of F-actin at the yolk cell margin circumference allowing the gradual closure of the blastopore as epiboly progresses.


Subject(s)
Intracellular Signaling Peptides and Proteins/physiology , Morphogenesis , Protein Serine-Threonine Kinases/physiology , Zebrafish/growth & development , Actins/metabolism , Animals , Calcium/metabolism , Cell Movement , Egg Yolk , Embryonic Development , Gastrula , Intracellular Signaling Peptides and Proteins/metabolism , Mutant Proteins , Protein Serine-Threonine Kinases/metabolism , Zebrafish/embryology , p38 Mitogen-Activated Protein Kinases/metabolism
9.
J Biol Chem ; 285(47): 37111-20, 2010 Nov 19.
Article in English | MEDLINE | ID: mdl-20864534

ABSTRACT

Aneurysmal bone cyst (ABC) is a pediatric osseous tumor characterized by extensive destruction of the surrounding bone. The molecular mechanisms underlying its pathogenesis are completely unknown. Recent work showed that translocation of the TRE17/USP6 locus occurs in over 60% of ABC cases resulting in TRE17 overexpression. Immature osteoblasts are presumed to be the cell type harboring translocation of TRE17 in at least a subset of ABCs. However, the effects of TRE17 overexpression on transformation and osteoblast function are unknown. TRE17 encodes a ubiquitin-specific protease (USP) and a TBC (TRE2-Bub2-Cdc16) domain that promotes activation of the Arf6 GTPase. Here we report that TRE17 potently inhibits the maturation of MC3T3 pre-osteoblasts in a USP-dependent and Arf6-independent manner. Notably, we find that TRE17 function is mediated through an autocrine mechanism. Transcriptome analysis of TRE17-expressing cells reveals dysregulation of several pathways with established roles in osteoblast maturation. In particular, signaling through the bone morphogenetic protein (BMP) pathway, a key regulator of osteogenesis, is profoundly altered. TRE17 simultaneously inhibits the expression of BMP-4 while augmenting the BMP antagonist, Gremlin-1. Osteoblastic maturation is restored in TRE17-expressing cells by the addition of exogenous BMP-4, thus establishing a functional role for BMP-4 during TRE17-induced transformation. Because bone homeostasis involves a precise balance between the activities of osteoblasts and osteoclasts, our studies raise the possibility that attenuated osteoblast maturation caused by TRE17 overexpression may contribute to the bone loss/destruction observed in ABC.


Subject(s)
Autocrine Communication , Bone Cysts, Aneurysmal/pathology , Bone Morphogenetic Proteins/metabolism , Endopeptidases/metabolism , Gene Expression Regulation, Neoplastic , Oncogenes/physiology , Osteoblasts/pathology , ADP-Ribosylation Factor 6 , ADP-Ribosylation Factors/genetics , ADP-Ribosylation Factors/metabolism , Alkaline Phosphatase/metabolism , Animals , Biomarkers/metabolism , Blotting, Western , Bone Cysts, Aneurysmal/enzymology , Bone Cysts, Aneurysmal/genetics , Bone Morphogenetic Proteins/genetics , Cell Differentiation , Cell Proliferation , Cell Transformation, Neoplastic , Culture Media, Conditioned/pharmacology , Electrophoretic Mobility Shift Assay , Endopeptidases/genetics , Gene Expression Profiling , HeLa Cells , Humans , Mice , Mutagenesis, Site-Directed , Oligonucleotide Array Sequence Analysis , Osteoblasts/metabolism , Protein Transport , RNA, Messenger/genetics , Reverse Transcriptase Polymerase Chain Reaction , Signal Transduction , Ubiquitin Thiolesterase , Ubiquitin-Specific Proteases
10.
Lab Invest ; 91(10): 1427-33, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21826056

ABSTRACT

Nodular fasciitis (NF) is a relatively common mass-forming and self-limited subcutaneous pseudosarcomatous myofibroblastic proliferation of unknown pathogenesis. Due to its rapid growth and high mitotic activity, NF is often misdiagnosed as a sarcoma. While studying the USP6 biology in aneurysmal bone cyst and other mesenchymal tumors, we identified high expression levels of USP6 mRNA in two examples of NF. This finding led us to further examine the mechanisms underlying USP6 overexpression in these lesions. Upon subsequent investigation, genomic rearrangements of the USP6 locus were found in 92% (44 of 48) of NF. Rapid amplification of 5'-cDNA ends identified MYH9 as the translocation partner. RT-PCR and direct sequencing revealed the fusion of the MYH9 promoter region to the entire coding region of USP6. Control tumors and tissues were negative for this fusion. Xenografts of cells overexpressing USP6 in nude mice exhibited clinical and histological features similar to human NF. The identification of a sensitive and specific abnormality in NF holds the potential to be used diagnostically. Considering the self-limited nature of the lesion, NF may represent a model of 'transient neoplasia', as it is, to our knowledge, the first example of a self-limited human disease characterized by a recurrent somatic gene fusion event.


Subject(s)
Fasciitis/genetics , Fasciitis/pathology , Gene Fusion , Molecular Motor Proteins/genetics , Myosin Heavy Chains/genetics , Proto-Oncogene Proteins/genetics , Ubiquitin Thiolesterase/genetics , Adolescent , Adult , Aged , Animals , Base Sequence , Cadherins/metabolism , Child , Child, Preschool , Collagen Type I/metabolism , Collagen Type I, alpha 1 Chain , Female , Gene Expression Profiling , Gene Rearrangement , Genome, Human/genetics , Humans , In Situ Hybridization, Fluorescence , Male , Mice , Mice, Nude , Middle Aged , Molecular Motor Proteins/metabolism , Myosin Heavy Chains/metabolism , Neoplasm Transplantation , Proto-Oncogene Proteins/metabolism , RNA, Messenger/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sarcoma/diagnosis , Translocation, Genetic , Transplantation, Heterologous , Ubiquitin Thiolesterase/metabolism , Up-Regulation , Young Adult
11.
Virchows Arch ; 479(5): 1007-1012, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34213575

ABSTRACT

Nodular fasciitis is a benign myofibroblastic neoplasm that characteristically enlarges rapidly and then usually regresses spontaneously. While the vast majority of tumors are benign, there are rare reports of morphologically benign nodular fasciitis giving rise to metastases, not predictable on histologic grounds. Here, we report what we believe is an example of morphologically malignant nodular fasciitis, which occurred in the upper extremity of a 7-year-old male. The tumor was composed of short, intersecting fascicles of myofibroblastic cells in a loose myxoid matrix, with keloidal hyalinization and admixed osteoclastic giant cells, all characteristic of nodular fasciitis. However, it additionally exhibited striking nuclear pleomorphism, a feature not compatible with conventional nodular fasciitis. Fluorescence in situ hybridization demonstrated a USP6 translocation, confirmed by next-generation sequencing to be the novel CALD1-USP6 fusion. No other somatic or germline mutations were detected. This case adds to the expanding morphologic and molecular genetic spectrum of nodular fasciitis.


Subject(s)
Biomarkers, Tumor/genetics , Calmodulin-Binding Proteins/genetics , Fasciitis/genetics , Gene Fusion , Myofibroblasts/pathology , Soft Tissue Neoplasms/genetics , Translocation, Genetic , Ubiquitin Thiolesterase/genetics , Child , Fasciitis/pathology , Fasciitis/surgery , Genetic Predisposition to Disease , Humans , In Situ Hybridization, Fluorescence , Male , Phenotype , Prognosis , Soft Tissue Neoplasms/pathology , Soft Tissue Neoplasms/surgery
12.
Cancer Res ; 81(8): 2171-2183, 2021 04 15.
Article in English | MEDLINE | ID: mdl-33558334

ABSTRACT

Ewing sarcoma is the second most common pediatric bone cancer, with a 5-year survival rate for metastatic disease of only 20%. Recent work indicates that survival is strongly correlated with high levels of tumor-infiltrating lymphocytes (TIL), whose abundance is associated with IFN-inducible chemokines CXCL10 and CCL5. However, the tumor-intrinsic factors that drive chemokine production and TIL recruitment have not been fully elucidated. We previously showed that ubiquitin-specific protease 6 (USP6) directly deubiquitinates and stabilizes Jak1, thereby inducing an IFN signature in Ewing sarcoma cells. Here, we show that this gene set comprises chemokines associated with immunostimulatory, antitumorigenic functions, including CXCL10 and CCL5. USP6 synergistically enhanced chemokine production in response to exogenous IFN by inducing surface upregulation of IFNAR1 and IFNGR1. USP6-expressing Ewing sarcoma cells stimulated migration of primary human monocytes and T lymphocytes and triggered activation of natural killer (NK) cells in vitro. USP6 inhibited Ewing sarcoma xenograft growth in nude but not NSG mice and was accompanied by increased intratumoral chemokine production and infiltration and activation of NK cells, dendritic cells, and macrophages, consistent with a requirement for innate immune cells in mediating the antitumorigenic effects of USP6. High USP6 expression in patients with Ewing sarcoma was associated with chemokine production, immune infiltration, and improved survival. This work reveals a previously unrecognized tumor-suppressive function for USP6, which engenders an immunostimulatory microenvironment through pleiotropic effects on multiple immune lineages. This further raises the possibility that USP6 activity may be harnessed to create a "hot" tumor microenvironment in immunotherapy. SIGNIFICANCE: This study reveals a novel tumor-suppressive function for USP6 by inducing an immunostimulatory microenvironment, suggesting that USP6 activity may be exploited to enhance immunotherapy regimens.


Subject(s)
Bone Neoplasms/genetics , Lymphocytes, Tumor-Infiltrating , Sarcoma, Ewing/genetics , Tumor Suppressor Proteins/physiology , Ubiquitin Thiolesterase/physiology , Animals , Bone Neoplasms/immunology , Bone Neoplasms/metabolism , Bone Neoplasms/mortality , Cell Movement/drug effects , Chemokine CCL5/biosynthesis , Chemokine CXCL10/biosynthesis , Dendritic Cells/drug effects , Humans , Immunotherapy , Interferons/pharmacology , Janus Kinase 1/metabolism , Killer Cells, Natural/drug effects , Macrophages/drug effects , Mice , Mice, Nude , Neoplasm Transplantation , Receptor, Interferon alpha-beta/metabolism , Receptors, Interferon/metabolism , Sarcoma, Ewing/immunology , Sarcoma, Ewing/metabolism , Sarcoma, Ewing/mortality , Tumor Microenvironment/immunology , Ubiquitin Thiolesterase/immunology , Ubiquitin Thiolesterase/metabolism , Up-Regulation/drug effects , Xenograft Model Antitumor Assays , Interferon gamma Receptor
13.
Mol Biol Cell ; 18(4): 1375-84, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17267689

ABSTRACT

Nerve growth factor (NGF) induces neurite outgrowth and differentiation in a process that involves NGF binding to its receptor TrkA and endocytosis of the NGF-TrkA complex into signaling endosomes. Here, we find that biogenesis of signaling endosomes requires inactivation of Rab5 to block early endosome fusion. Expression of dominant-negative Rab5 mutants enhanced NGF-mediated neurite outgrowth, whereas a constitutively active Rab5 mutant or Rabex-5 inhibited this process. Consistently, inactivation of Rab5 sustained TrkA activation on the endosomes. Furthermore, NGF treatment rapidly decreased cellular level of active Rab5-GTP, as shown by pull-down assays. This Rab5 down-regulation was mediated by RabGAP5, which was shown to associate with TrkA by coimmunoprecipitation assays. Importantly, RNA interference of RabGAP5 as well as a RabGAP5 truncation mutant containing the TrkA-binding domain blocked NGF-mediated neurite outgrowth, indicating a requirement for RabGAP5 in this process. Thus, NGF signaling down-regulates Rab5 activity via RabGAP5 to facilitate neurite outgrowth and differentiation.


Subject(s)
Nerve Growth Factor/pharmacology , Neurites/physiology , rab5 GTP-Binding Proteins/metabolism , Animals , Down-Regulation , GTPase-Activating Proteins/genetics , GTPase-Activating Proteins/metabolism , Gene Expression Regulation , Guanine Nucleotide Exchange Factors/drug effects , Guanine Nucleotide Exchange Factors/genetics , Guanine Nucleotide Exchange Factors/metabolism , Guanosine Triphosphate/metabolism , Mutation , Nerve Growth Factor/metabolism , Neurites/drug effects , PC12 Cells , Rats , Receptor, trkA/metabolism , Signal Transduction , rab5 GTP-Binding Proteins/drug effects , rab5 GTP-Binding Proteins/genetics
14.
Mol Biol Cell ; 17(2): 645-57, 2006 Feb.
Article in English | MEDLINE | ID: mdl-16314390

ABSTRACT

Extracellular signal-regulated kinase (Erk) is widely recognized for its central role in cell proliferation and motility. Although previous work has shown that Erk is localized at endosomal compartments, no role for Erk in regulating endosomal trafficking has been demonstrated. Here, we report that Erk signaling regulates trafficking through the clathrin-independent, ADP-ribosylation factor 6 (Arf6) GTPase-regulated endosomal pathway. Inactivation of Erk induced by a variety of methods leads to a dramatic expansion of the Arf6 endosomal recycling compartment, and intracellular accumulation of cargo, such as class I major histocompatibility complex, within the expanded endosome. Treatment of cells with the mitogen-activated protein kinase kinase (MEK) inhibitor U0126 reduces surface expression of MHCI without affecting its rate of endocytosis, suggesting that inactivation of Erk perturbs recycling. Furthermore, under conditions where Erk activity is inhibited, a large cohort of Erk, MEK, and the Erk scaffold kinase suppressor of Ras 1 accumulates at the Arf6 recycling compartment. The requirement for Erk was highly specific for this endocytic pathway, because its inhibition had no effect on trafficking of cargo of the classical clathrin-dependent pathway. These studies reveal a previously unappreciated link of Erk signaling to organelle dynamics and endosomal trafficking.


Subject(s)
Clathrin/physiology , Endocytosis/physiology , Endosomes/physiology , Extracellular Signal-Regulated MAP Kinases/physiology , ADP-Ribosylation Factor 6 , ADP-Ribosylation Factors/metabolism , Biological Transport/drug effects , Biological Transport/physiology , Biomarkers , Butadienes/pharmacology , Cell Membrane/metabolism , Endocytosis/drug effects , Enzyme Inhibitors/pharmacology , Epistasis, Genetic , Extracellular Signal-Regulated MAP Kinases/antagonists & inhibitors , HeLa Cells , Histocompatibility Antigens Class I/metabolism , Humans , Kinetics , MAP Kinase Kinase 1/analysis , Nitriles/pharmacology , Protein Kinases/analysis , Protein Kinases/metabolism , Signal Transduction
15.
Mol Cancer Res ; 16(12): 1834-1843, 2018 12.
Article in English | MEDLINE | ID: mdl-30131449

ABSTRACT

Ewing sarcoma is the second most common sarcoma of the bone, afflicting predominantly the pediatric population. Although patients with localized disease exhibit favorable survival rates, patients with metastatic disease suffer a dismal 5-year rate of approximately 25%. Thus, there is a great need to develop treatments to combat the disseminated disease. Ubiquitin-specific protease 6 (USP6/TRE17) has been implicated as the key etiologic factor in several benign mesenchymal tumors, including nodular fasciitis and aneurysmal bone cyst (ABC). However, the role of USP6 in the biology of malignant entities remains unexplored. Previously, it was observed that USP6 is sufficient to drive formation of tumors mimicking ABC and nodular fasciitis, and that it functions through JAK1/STAT3 signaling. However, in the context of Ewing sarcoma, USP6 does not enhance the transformation, but rather triggers an IFN response signature, both in cultured Ewing sarcoma cells in vitro and in clinical specimens in vivo. Not only does USP6 independently induce activation of the IFN signaling mediators, JAK1 and STAT1, but it also renders Ewing sarcoma cells exquisitely responsive to exogenous IFNs, potentiating activation of STAT1 and STAT3. Furthermore, IFNß (a type I IFN) induces apoptosis specifically in USP6-positive but not USP6-negative Ewing sarcoma cells. Finally, apoptosis is mediated through the proapoptotic ligand TRAIL, which is synergistically induced by type I IFN and USP6. IMPLICATIONS: These findings provide the first insights into USP6 functions in a clinically relevant malignant entity, and raise the possibility of using IFN for targeting USP6-positive Ewing sarcoma.


Subject(s)
Bone Neoplasms/metabolism , Interferons/pharmacology , Proto-Oncogene Proteins/genetics , Proto-Oncogene Proteins/metabolism , Sarcoma, Ewing/metabolism , TNF-Related Apoptosis-Inducing Ligand/metabolism , Ubiquitin Thiolesterase/genetics , Ubiquitin Thiolesterase/metabolism , Bone Neoplasms/drug therapy , Bone Neoplasms/genetics , Cell Line, Tumor , Cell Survival/drug effects , Child , Gene Expression Profiling , Gene Expression Regulation, Neoplastic/drug effects , Humans , Sarcoma, Ewing/drug therapy , Sarcoma, Ewing/genetics , Sequence Analysis, RNA , Signal Transduction/drug effects , TNF-Related Apoptosis-Inducing Ligand/genetics , Up-Regulation/drug effects
16.
Mol Cell Biol ; 23(6): 2151-61, 2003 Mar.
Article in English | MEDLINE | ID: mdl-12612085

ABSTRACT

The Rho family GTPases Cdc42 and Rac1 play fundamental roles in transformation and actin remodeling. Here, we demonstrate that the TRE17 oncogene encodes a component of a novel effector pathway for these GTPases. TRE17 coprecipitated specifically with the active forms of Cdc42 and Rac1 in vivo. Furthermore, the subcellular localization of TRE17 was dramatically regulated by these GTPases and mitogens. Under serum-starved conditions, TRE17 localized predominantly to filamentous structures within the cell. Epidermal growth factor (EGF) induced relocalization of TRE17 to the plasma membrane in a Cdc42-/Rac1-dependent manner. Coexpression of activated alleles of Cdc42 or Rac1 also caused complete redistribution of TRE17 to the plasma membrane, where it partially colocalized with the GTPases in filopodia and ruffles, respectively. Membrane recruitment of TRE17 by EGF or the GTPases was dependent on actin polymerization. Finally, we found that a C-terminal truncation mutant of TRE17 induced the accumulation of cortical actin, mimicking the effects of activated Cdc42. Together, these results identify TRE17 as part of a novel effector complex for Cdc42 and Rac1, potentially contributing to their effects on actin remodeling. The present study provides insights into the regulation and cellular function of this previously uncharacterized oncogene.


Subject(s)
Actins/metabolism , Endopeptidases , Oncogene Proteins, Fusion/physiology , Oncogene Proteins , Oncogenes , cdc42 GTP-Binding Protein/physiology , rac1 GTP-Binding Protein/physiology , Actin Cytoskeleton/physiology , Actin Cytoskeleton/ultrastructure , Amino Acid Substitution , Animals , Biopolymers , COS Cells , Chlorocebus aethiops , Culture Media, Serum-Free , Cytoskeleton/metabolism , Cytoskeleton/ultrastructure , Epidermal Growth Factor/pharmacology , Guanosine Triphosphate/metabolism , HeLa Cells/drug effects , HeLa Cells/metabolism , HeLa Cells/ultrastructure , Humans , Macromolecular Substances , Membrane Proteins/physiology , Microscopy, Confocal , Microscopy, Fluorescence , Microtubules/metabolism , Microtubules/ultrastructure , Models, Biological , Oncogene Proteins, Fusion/genetics , Oncogene Proteins, Fusion/isolation & purification , Protein Structure, Tertiary , Protein Transport/drug effects , Proto-Oncogene Proteins , Pseudopodia/chemistry , Pseudopodia/ultrastructure , Recombinant Fusion Proteins/physiology , Structure-Activity Relationship , Transfection , Two-Hybrid System Techniques , Ubiquitin Thiolesterase , cdc42 GTP-Binding Protein/genetics , cdc42 GTP-Binding Protein/isolation & purification , rac1 GTP-Binding Protein/genetics , rac1 GTP-Binding Protein/isolation & purification
17.
Mol Cell Biol ; 24(22): 9752-62, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15509780

ABSTRACT

TBC (Tre-2/Bub2/Cdc16) domains are predicted to encode GTPase-activating proteins (GAPs) for Rab family G proteins. While approximately 50 TBC proteins are predicted to exist in humans, little is known about their substrate specificity. Here we show that TRE17 (also called Tre-2 and USP6), a founding member of the TBC family, targets the Arf family GTPase Arf6, which regulates plasma membrane-endosome trafficking. Surprisingly, TRE17 does not function as a GAP for Arf6 but rather promotes its activation in vivo. TRE17 associates directly with Arf6 in its GDP- but not GTP-bound state. Mapping experiments pinpoint the site of interaction to the TBC domain of TRE17. Forced expression of TRE17 promotes the localization of Arf6 to the plasma membrane, leading to Arf6 activation, presumably due to facilitated access to membrane-associated guanine nucleotide exchange factors (GEFs). Furthermore, TRE17 cooperates with Arf6 GEFs to induce GTP loading of Arf6 in vivo. Finally, short interfering RNA-mediated loss of TRE17 leads to attenuated Arf6 activation. These studies identify TRE17 as a novel regulator of the Arf6-regulated plasma membrane recycling system and reveal an unexpected function for TBC domains.


Subject(s)
ADP-Ribosylation Factors/metabolism , Endopeptidases/metabolism , Oncogene Proteins/metabolism , ADP-Ribosylation Factor 6 , ADP-Ribosylation Factors/genetics , Amino Acid Sequence , Base Sequence , Binding Sites , Cell Membrane/metabolism , DNA/genetics , Endopeptidases/chemistry , Endopeptidases/genetics , Endosomes/metabolism , Guanosine Diphosphate/metabolism , Guanosine Triphosphate/metabolism , HeLa Cells , Humans , Molecular Sequence Data , Oncogene Proteins/chemistry , Oncogene Proteins/genetics , Phenotype , Protein Structure, Tertiary , Proto-Oncogene Proteins , RNA, Small Interfering/genetics , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Sequence Homology, Amino Acid , Transfection , Ubiquitin Thiolesterase
18.
Cancer Res ; 76(18): 5337-47, 2016 09 15.
Article in English | MEDLINE | ID: mdl-27440725

ABSTRACT

Bone and soft tissue tumors (BSTT) are relatively poorly understood, hampering the development of effective therapies. Here we report a role for the ubiquitin-specific protease 6 (USP6)/TRE17 oncogene, which is overexpressed upon chromosome translocation in various human tumors, including aneurysmal bone cyst (ABC), and the related benign lesion nodular fasciitis. Ectopic expression of USP6 is known to drive formation of tumors, which recapitulate key features of ABC and nodular fasciitis; however, the identity of USP6's relevant substrates has been obscure. Here we report that the Jak1-STAT3 signaling pathway serves as an essential effector of USP6 in BSTT formation. We found that USP6 directly deubiquitinated Jak1, leading to its stabilization and activation of STAT3. The tumorigenic potential of USP6 was attenuated significantly by CRISPR-mediated deletion of Jak1 or STAT3, or by administration of a Jak family inhibitor. Analysis of primary clinical samples of nodular fasciitis confirmed the activation of a Jak1-STAT3 gene signature in vivo Together, our studies highlight Jak1 as the first identified substrate for USP6, and they offer a mechanistic rationale for the clinical investigation of Jak and STAT3 inhibitors as therapeutics for the treatment of bone and soft tissue tumors along with other neoplasms driven by USP6 overexpression. Cancer Res; 76(18); 5337-47. ©2016 AACR.


Subject(s)
Bone Neoplasms/pathology , Carcinogenesis/genetics , Janus Kinase 1/metabolism , Proto-Oncogene Proteins/genetics , STAT3 Transcription Factor/metabolism , Signal Transduction , Soft Tissue Neoplasms/pathology , Ubiquitin Thiolesterase/genetics , Animals , Bone Neoplasms/genetics , Bone Neoplasms/metabolism , Cell Line, Tumor , Electrophoretic Mobility Shift Assay , Gene Expression Profiling , Gene Expression Regulation, Neoplastic , Heterografts , Humans , Immunoblotting , Immunohistochemistry , Immunoprecipitation , Mice , Mice, Inbred NOD , Mice, SCID , Oligonucleotide Array Sequence Analysis , Signal Transduction/physiology , Soft Tissue Neoplasms/genetics , Soft Tissue Neoplasms/metabolism
20.
Hum Pathol ; 45(1): 1-11, 2014 Jan.
Article in English | MEDLINE | ID: mdl-23769422

ABSTRACT

USP6 (also known as TRE17) is a ubiquitin-specific protease that was identified as an oncogene in transfection experiments with Ewing sarcoma DNA 2 decades ago. Until recently, little was known about USP6 function and mechanisms of oncogenic activation. The identification of USP6 fusion genes in aneurysmal bone cyst (ABC) and, more recently, in nodular fasciitis led to a better understanding of the pathogenesis of these lesions. Furthermore, the detection of USP6 genomic rearrangements or USP6 fusion genes may be used as a diagnostic tool for these lesions. In this review, we discuss the clinicopathologic features, molecular pathology, and pathogenesis of ABC and nodular fasciitis. We also discuss the possible line of differentiation of ABC and its relationship to nodular fasciitis and other lesions.


Subject(s)
Bone Cysts, Aneurysmal/genetics , Fasciitis/genetics , Proto-Oncogene Proteins/genetics , Ubiquitin Thiolesterase/genetics , Bone Cysts, Aneurysmal/pathology , Fasciitis/pathology , Humans , Oncogenes
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