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1.
Large-scale benchmarking of circRNA detection tools reveals large differences in sensitivity but not in precision.
Nat Methods
; 20(8): 1159-1169, 2023 08.
Article
in English
| MEDLINE | ID: mdl-37443337
2.
EMLI-ICC: an ensemble machine learning-based integration algorithm for metastasis prediction and risk stratification in intrahepatic cholangiocarcinoma.
Brief Bioinform
; 23(6)2022 11 19.
Article
in English
| MEDLINE | ID: mdl-36259363
3.
TOD-CUP: a gene expression rank-based majority vote algorithm for tissue origin diagnosis of cancers of unknown primary.
Brief Bioinform
; 22(2): 2106-2118, 2021 03 22.
Article
in English
| MEDLINE | ID: mdl-32266390
4.
Characteristics of plant circular RNAs.
Brief Bioinform
; 21(1): 135-143, 2020 Jan 17.
Article
in English
| MEDLINE | ID: mdl-30445438
5.
scDetect: a rank-based ensemble learning algorithm for cell type identification of single-cell RNA sequencing in cancer.
Bioinformatics
; 37(22): 4115-4122, 2021 11 18.
Article
in English
| MEDLINE | ID: mdl-34048541
6.
Recent origination of circular RNAs in plants.
New Phytol
; 233(1): 515-525, 2022 01.
Article
in English
| MEDLINE | ID: mdl-34643280
7.
Effects of Sample Size on Plant Single-Cell RNA Profiling.
Curr Issues Mol Biol
; 43(3): 1685-1697, 2021 Oct 20.
Article
in English
| MEDLINE | ID: mdl-34698115
8.
Full-length sequence assembly reveals circular RNAs with diverse non-GT/AG splicing signals in rice.
RNA Biol
; 14(8): 1055-1063, 2017 08 03.
Article
in English
| MEDLINE | ID: mdl-27739910
9.
The whole chloroplast genome of Secale strictum subsp. kuprijanovii, a wild and perennial kinship to cultivated rye.
Mitochondrial DNA B Resour
; 7(1): 112-114, 2022.
Article
in English
| MEDLINE | ID: mdl-34993330
10.
PlantcircBase 7.0: Full-length transcripts and conservation of plant circRNAs.
Plant Commun
; 3(4): 100343, 2022 07 11.
Article
in English
| MEDLINE | ID: mdl-35637632
11.
Multi-omics molecular biomarkers and database of osteoarthritis.
Database (Oxford)
; 20222022 07 05.
Article
in English
| MEDLINE | ID: mdl-35788653
12.
Large-scale identification of extracellular plant miRNAs in mammals implicates their dietary intake.
PLoS One
; 16(9): e0257878, 2021.
Article
in English
| MEDLINE | ID: mdl-34587184
13.
Signaling pathway perturbation analysis for assessment of biological impact of cigarette smoke on lung cells.
Sci Rep
; 11(1): 16715, 2021 08 18.
Article
in English
| MEDLINE | ID: mdl-34408184
14.
RiceRelativesGD: a genomic database of rice relatives for rice research.
Database (Oxford)
; 20192019 01 01.
Article
in English
| MEDLINE | ID: mdl-31560050
15.
The Circular RNA Profiles of Colorectal Tumor Metastatic Cells.
Front Genet
; 9: 34, 2018.
Article
in English
| MEDLINE | ID: mdl-29479369
16.
Echinochloa crus-galli genome analysis provides insight into its adaptation and invasiveness as a weed.
Nat Commun
; 8(1): 1031, 2017 10 18.
Article
in English
| MEDLINE | ID: mdl-29044108
17.
PlantscRNAdb: A database for plant single-cell RNA analysis.
Mol Plant
; 14(6): 855-857, 2021 06 07.
Article
in English
| MEDLINE | ID: mdl-33962062
18.
PlantcircBase: A Database for Plant Circular RNAs.
Mol Plant
; 10(8): 1126-1128, 2017 08 07.
Article
in English
| MEDLINE | ID: mdl-28315753
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