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1.

Potent Neutralizing Antibodies against SARS-CoV-2 Identified by High-Throughput Single-Cell Sequencing of Convalescent Patients' B Cells.

Cao, Yunlong; Su, Bin; Guo, Xianghua; Sun, Wenjie; Deng, Yongqiang; Bao, Linlin; Zhu, Qinyu; Zhang, Xu; Zheng, Yinghui; Geng, Chenyang; Chai, Xiaoran; He, Runsheng; Li, Xiaofeng; Lv, Qi; Zhu, Hua; Deng, Wei; Xu, Yanfeng; Wang, Yanjun; Qiao, Luxin; Tan, Yafang; Song, Liyang; Wang, Guopeng; Du, Xiaoxia; Gao, Ning; Liu, Jiangning; Xiao, Junyu; Su, Xiao-Dong; Du, Zongmin; Feng, Yingmei; Qin, Chuan; Qin, Chengfeng; Jin, Ronghua; Xie, X Sunney.

Cell ; 182(1): 73-84.e16, 2020 07 09.

Article in English | MEDLINE | ID: mdl-32425270

2.

A novel sORF gene mutant strain of Yersinia pestis vaccine EV76 offers enhanced safety and improved protection against plague.

Guo, Xiao; Xin, Youquan; Tong, Zehui; Cao, Shiyang; Zhang, Yuan; Wu, Gengshan; Chen, Hongyan; Wang, Tong; Song, Yajun; Zhang, Qingwen; Yang, Ruifu; Du, Zongmin.

PLoS Pathog ; 20(3): e1012129, 2024 Mar.

Article in English | MEDLINE | ID: mdl-38547321

3.

Competitive fitness and homologous recombination of SARS-CoV-2 variants of concern.

Chen, Qi; Qin, Si; Zhou, Hang-Yu; Deng, Yong-Qiang; Shi, Pan-Deng; Zhao, Hui; Li, Xiao-Feng; Huang, Xing-Yao; Wu, Ya-Rong; Guo, Yan; Pei, Guang-Qian; Wang, Yun-Fei; Sun, Si-Qi; Du, Zong-Min; Cui, Yu-Jun; Fan, Hang; Qin, Cheng-Feng.

J Med Virol ; 95(12): e29278, 2023 12.

Article in English | MEDLINE | ID: mdl-38088537

4.

Secretome and Comparative Proteomics of Yersinia pestis Identify Two Novel E3 Ubiquitin Ligases That Contribute to Plague Virulence.

Cao, Shiyang; Chen, Yuling; Yan, Yanfeng; Zhu, Songbiao; Tan, Yafang; Wang, Tong; Song, Yajun; Deng, Haiteng; Yang, Ruifu; Du, Zongmin.

Mol Cell Proteomics ; 20: 100066, 2021.

Article in English | MEDLINE | ID: mdl-33631294

5.

Reversible Gene Expression Control in Yersinia pestis by Using an Optimized CRISPR Interference System.

Wang, Tong; Wang, Min; Zhang, Qingwen; Cao, Shiyang; Li, Xiang; Qi, Zhizhen; Tan, Yafang; You, Yang; Bi, Yujing; Song, Yajun; Yang, Ruifu; Du, Zongmin.

Appl Environ Microbiol ; 85(12)2019 06 15.

Article in English | MEDLINE | ID: mdl-30979834

6.

An Interaction between the Inner Rod Protein YscI and the Needle Protein YscF Is Required to Assemble the Needle Structure of the Yersinia Type Three Secretion System.

Cao, Shi-Yang; Liu, Wan-Bin; Tan, Ya-Fang; Yang, Hui-Ying; Zhang, Ting-Ting; Wang, Tong; Wang, Xiao-Yi; Song, Ya-Jun; Yang, Rui-Fu; Du, Zong-Min.

J Biol Chem ; 292(13): 5488-5498, 2017 Mar 31.

Article in English | MEDLINE | ID: mdl-28196868

7.

Protein Acetylation Mediated by YfiQ and CobB Is Involved in the Virulence and Stress Response of Yersinia pestis.

Liu, Wanbing; Tan, Yafang; Cao, Shiyang; Zhao, Haihong; Fang, Haihong; Yang, Xiaoyan; Wang, Tong; Zhou, Yazhou; Yan, Yanfeng; Han, Yanping; Song, Yajun; Bi, Yujing; Wang, Xiaoyi; Yang, Ruifu; Du, Zongmin.

Infect Immun ; 86(6)2018 06.

Article in English | MEDLINE | ID: mdl-29610260

8.

Yersinia pestis YopK Inhibits Bacterial Adhesion to Host Cells by Binding to the Extracellular Matrix Adaptor Protein Matrilin-2.

Tan, Yafang; Liu, Wanbing; Zhang, Qingwen; Cao, Shiyang; Zhao, Haihong; Wang, Tong; Qi, Zhizhen; Han, Yanping; Song, Yajun; Wang, Xiaoyi; Yang, Ruifu; Du, Zongmin.

Infect Immun ; 85(8)2017 08.

Article in English | MEDLINE | ID: mdl-28533472

9.

Host transcriptomic responses to pneumonic plague reveal that Yersinia pestis inhibits both the initial adaptive and innate immune responses in mice.

Yang, Huiying; Wang, Tong; Tian, Guang; Zhang, Qingwen; Wu, Xiaohong; Xin, Youqian; Yan, Yanfeng; Tan, Yafang; Cao, Shiyang; Liu, Wanbing; Cui, Yujun; Yang, Ruifu; Du, Zongmin.

Int J Med Microbiol ; 307(1): 64-74, 2017 Jan.

Article in English | MEDLINE | ID: mdl-27876297

10.

Yersinia protein kinase A phosphorylates vasodilator-stimulated phosphoprotein to modify the host cytoskeleton.

Ke, Yuehua; Tan, Yafang; Wei, Na; Yang, Fen; Yang, Huiying; Cao, Shiyang; Wang, Xiaohui; Wang, Jian; Han, Yanping; Bi, Yujing; Cui, Yujun; Yan, Yanfeng; Song, Yajun; Yang, Xiaoming; Du, Zongmin; Yang, Ruifu.

Cell Microbiol ; 17(4): 473-85, 2015 Apr.

Article in English | MEDLINE | ID: mdl-25298072

11.

IL-17A produced by neutrophils protects against pneumonic plague through orchestrating IFN-Î³-activated macrophage programming.

Bi, Yujing; Zhou, Jiyuan; Yang, Hui; Wang, Xiao; Zhang, Xuecan; Wang, Qiong; Wu, Xiaohong; Han, Yanping; Song, Yajun; Tan, Yafang; Du, Zongmin; Yang, Huiying; Zhou, Dongsheng; Cui, Yujun; Zhou, Lei; Yan, Yanfeng; Zhang, Pingping; Guo, Zhaobiao; Wang, Xiaoyi; Liu, Guangwei; Yang, Ruifu.

J Immunol ; 192(2): 704-13, 2014 Jan 15.

Article in English | MEDLINE | ID: mdl-24337746

12.

Pathology and Pathogenesis of Yersinia pestis.

Du, Zongmin; Wang, Xiaoyi.

Adv Exp Med Biol ; 918: 193-222, 2016.

Article in English | MEDLINE | ID: mdl-27722864

13.

Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis.

Cui, Yujun; Yu, Chang; Yan, Yanfeng; Li, Dongfang; Li, Yanjun; Jombart, Thibaut; Weinert, Lucy A; Wang, Zuyun; Guo, Zhaobiao; Xu, Lizhi; Zhang, Yujiang; Zheng, Hancheng; Qin, Nan; Xiao, Xiao; Wu, Mingshou; Wang, Xiaoyi; Zhou, Dongsheng; Qi, Zhizhen; Du, Zongmin; Wu, Honglong; Yang, Xianwei; Cao, Hongzhi; Wang, Hu; Wang, Jing; Yao, Shusen; Rakin, Alexander; Li, Yingrui; Falush, Daniel; Balloux, Francois; Achtman, Mark; Song, Yajun; Wang, Jun; Yang, Ruifu.

Proc Natl Acad Sci U S A ; 110(2): 577-82, 2013 Jan 08.

Article in English | MEDLINE | ID: mdl-23271803

14.

Correction for Zhao et al., "Outer Membrane Proteins Ail and OmpF of Yersinia pestis Are Involved in the Adsorption of T7-Related Bacteriophage Yep-phi".

Zhao, Xiangna; Cui, Yujun; Yan, Yanfeng; Du, Zongmin; Tan, Yafang; Yang, Huiying; Bi, Yujing; Zhang, Pingping; Zhou, Lei; Zhou, Dongsheng; Han, Yanping; Song, Yajun; Wang, Xiaoyi; Yang, Ruifu.

J Virol ; 92(6)2018 03 15.

Article in English | MEDLINE | ID: mdl-29483286

15.

Outer membrane proteins ail and OmpF of Yersinia pestis are involved in the adsorption of T7-related bacteriophage Yep-phi.

Zhao, Xiangna; Cui, Yujun; Yan, Yanfeng; Du, Zongmin; Tan, Yafang; Yang, Huiying; Bi, Yujing; Zhang, Pingping; Zhou, Lei; Zhou, Dongsheng; Han, Yanping; Song, Yajun; Wang, Xiaoyi; Yang, Ruifu.

J Virol ; 87(22): 12260-9, 2013 Nov.

Article in English | MEDLINE | ID: mdl-24006436

16.

Development and evaluation of a multi-target droplet digital PCR assay for highly sensitive and specific detection of Yersinia pestis.

Zhao, Yanting; Yan, Ziheng; Song, Kai; Li, Yanbing; Shen, Leiming; Cui, Yiming; Du, Zongmin; Yang, Ruifu; Song, Yajun; Jing, Lan; Zhao, Yong.

PLoS Negl Trop Dis ; 18(5): e0012167, 2024 May.

Article in English | MEDLINE | ID: mdl-38701065

17.

Autoregulation of PhoP/PhoQ and positive regulation of the cyclic AMP receptor protein-cyclic AMP complex by PhoP in Yersinia pestis.

Zhang, Yiquan; Wang, Li; Han, Yanping; Yan, Yanfeng; Tan, Yafang; Zhou, Lei; Cui, Yujun; Du, Zongmin; Wang, Xiaoyi; Bi, Yujing; Yang, Huiying; Song, Yajun; Zhang, Pingping; Zhou, Dongsheng; Yang, Ruifu.

J Bacteriol ; 195(5): 1022-30, 2013 Mar.

Article in English | MEDLINE | ID: mdl-23264579

18.

[Study on the functions of potential new genes of Yersinia pestis type three secretion system].

Zhang, Ting-ting; Peng, Guang-neng; Yang, Hui-ying; Tan, Ya-fang; Cui, Ming-quan; Wei, Na; Han, Wei; DU, Zong-min.

Zhonghua Yu Fang Yi Xue Za Zhi ; 47(7): 627-31, 2013 Jul.

Article in Zh | MEDLINE | ID: mdl-24304956

19.

Comparative Lysine Acetylome Analysis of Y. pestis YfiQ/CobB Mutants Reveals that Acetylation of SlyA Lys73 Significantly Promotes Biofilm Formation of Y. pestis.

Tan, Yafang; Liu, Wanbing; Chen, Yuling; Zhou, Yazhou; Song, Kai; Cao, Shiyang; Zhang, Yuan; Song, Yajun; Deng, Haiteng; Yang, Ruifu; Du, Zongmin.

Microbiol Spectr ; 11(4): e0046023, 2023 08 17.

Article in English | MEDLINE | ID: mdl-37458592

20.

Single-cell transcriptomics of immune cells in lymph nodes reveals their composition and alterations in functional dynamics during the early stages of bubonic plague.

Zhao, Yifan; Wang, Tong; Liu, Ziyang; Ke, Yuehua; Li, Ruoyan; Chen, Hongyan; You, Yang; Wu, Gengshan; Cao, Shiyang; Du, Zongmin; Bai, Fan; Yang, Ruifu.

Sci China Life Sci ; 66(1): 110-126, 2023 01.

Article in English | MEDLINE | ID: mdl-35943690

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