Efficient and robust phase unwrapping method based on SFNet.

Phase unwrapping is a crucial step in obtaining the final physical information in the field of optical metrology. Although good at dealing with phase with discontinuity and noise, most deep learning-based spatial phase unwrapping methods suffer from the complex model and unsatisfactory performance, partially due to simple noise type for training datasets and limited interpretability. This paper proposes a highly efficient and robust spatial phase unwrapping method based on an improved SegFormer network, SFNet. The SFNet structure uses a hierarchical encoder without positional encoding and a decoder based on a lightweight fully connected multilayer perceptron. The proposed method utilizes the self-attention mechanism of the Transformer to better capture the global relationship of phase changes and reduce errors in the phase unwrapping process. It has a lower parameter count, speeding up the phase unwrapping. The network is trained on a simulated dataset containing various types of noise and phase discontinuity. This paper compares the proposed method with several state-of-the-art deep learning-based and traditional methods in terms of important evaluation indices, such as RMSE and PFS, highlighting its structural stability, robustness to noise, and generalization.

Error analysis and realization of a phase-modulated diffraction grating used as a displacement sensor.

A grating-based interferometric cavity produces coherent diffraction light field in a compact size, serving as a promising candidate for displacement measurement by taking advantage of both high integration and high accuracy. Phase-modulated diffraction gratings (PMDGs) make use of a combination of diffractive optical elements, allowing for the diminishment of zeroth-order reflected beams and thus improving the energy utilization coefficient and sensitivity of grating-based displacement measurements. However, conventional PMDGs with submicron-scale features usually require demanding micromachining processes, posing a significant challenge to manufacturability. Involving a four-region PMDG, this paper establishes a hybrid error model including etching error and coating error, thus providing a quantitative analysis of the relation between the errors and optical responses. The hybrid error model and the designated process-tolerant grating are experimentally verified by micromachining and grating-based displacement measurements using an 850 nm laser, confirming the validity and effectiveness. It is found the PMDG achieves an energy utilization coefficient (the ratio of the peak-to-peak value of the ±1st order beams to the 0th-order beam) improvement of nearly 500% and a four-fold reduction in 0th-order beam intensity compared with the traditional amplitude grating. More importantly, this PMDG maintains very tolerant process requirements, and the etching error and coating error can be up to 0.5 µm and 0.6 µm, respectively. This offers attractive alternatives to the fabrication of PMDGs and grating-based devices with wide process compatibility. This work first systematically investigates the influence of fabrication errors and identifies the interplay between the errors and the optical response for PMDGs. The hybrid error model allows further avenues for the fabrication of diffraction elements with practical limitations of micromachining fabrication.

Deep learning optical image denoising research based on principal component estimation.

High-quality denoising of optical interference images usually requires preliminary prediction of the noise level. Although blind denoising can filter the image at the pixel level without noise prediction, it inevitably loses a significant amount of phase information. This paper proposes a fast and high-quality denoising algorithm for optical interference images that combines the merits of a principal component analysis (PCA) and residual neural networks. The PCA is used to analyze the image noise and, in turn, establishes an accurate mapping between the estimated and true noise levels. The mapping helps to select a suitable residual neural network model for image processing, which maximizes the retention of image information and reduces the effect of noise. In addition, a comprehensive evaluation factor to account for the time complexity and denoising effect of the algorithm is proposed, since time complexity can be a dominant concern in some cases of actual measurement. The performance of the denoising algorithm and the effectiveness of the evaluation criterion are demonstrated to be high by processing a set of optical interference images and benchmarking with other denoising algorithms. The proposed algorithm outperforms the previously reported counterparts in a specific area of optical interference image preprocessing and provides an alternative paradigm for other denoising problems of optics, such as holograms and structured light measurements.

Sex- and size-dependent accumulation of Dechlorane Plus flame retardant in a wild frog-eating snake Amphiesma stolata.

Despite several studies having addressed the bioaccumulation of Dechlorane Plus (DP) flame retardant in wildlife, there is still a dearth of information for reptiles in general and for snakes in particular. Here, we report the residue levels and trophic transfer of syn-, anti-, and anti-Cl11-DP in a frog-eating snake-namely, the striped keelback snake Amphiesma stolata-from a DP hotspot in South China. The concentrations of syn-, anti-, and anti-Cl11-DP in A. stolata ranged from 1.06-21.2, 2.13-21.5, and 0.16-10.6 ng/g lipid weight, respectively, with significantly higher levels in males compared with females. Statistical analysis showed that the concentrations of these chemicals were negatively correlated with body sizes (length and mass) of the snake. The fractional abundance of anti-DP (fanti) did not significantly differ either between the sexes or between A. stolata and its diet (i.e., frogs). However, fanti showed positive correlations with the snake's body size and negative correlations with ∑DP concentrations (summed concentrations of syn- and anti-DP), indicating that body size and DP residue levels are important factors influencing DP isomeric profiles in these snakes. Biomagnification factors estimated based on the relationship between A. stolata and frogs were 0.49 ± 0.01 (mean ± SE), 0.44 ± 0.09, and 1.79 ± 0.54 for syn-, anti-, and anti-Cl11-DP, respectively, suggesting trophic dilution of syn- and anti-DP and a mild biomagnification of anti-Cl11-DP from frogs to snakes.

Bioaccumulation and maternal transfer of two understudied DDT metabolites in wild fish species.

While the secondary metabolites of DDT such as 2,2-bis(chlorophenyl)-1-chloroethylene (DDMU) and 2,2-bis(chlorophenyl)methane (DDM) have been detected in the environment for several decades, knowledge is extremely limited on their bioaccumulation characteristics. Here, we reported the bioaccumulation and maternal transfer of p,p'-DDMU and p,p'-DDM in two wild fishes, i.e., the northern snakehead (Channa argus) and crucian carp (Carassius auratus), from a DDT contaminated site in South China. The hepatic concentrations of p,p'-DDMU and p,p'-DDM in the fish were up to 549 and 893 ng/g lipid weight, contributing 5.3% and 3.2% in average to ΣDDXs (the sum concentrations of DDT and its 6 metabolites), respectively. The residues of p,p'-DDMU and p,p'-DDM in the fish exhibited interspecific and intraspecific variations, resulting from the differences in lipid content, sex, and body sizes (length and mass) between or within species. Both p,p'-DDMU and p,p'-DDM were consistently detected in the fish eggs, demonstrating their maternal transfer in female fish. The mean eggs to liver lipid-normalized concentration (E/L) ratios of p,p'-DDMU and p,p'-DDM were 0.98 and 1.77 in the northern snakehead, 0.35 and 0.01 in crucian carp, respectively; which were comparable to or even exceeded those of DDT and its major metabolites calculated in the same individual. Statistical analyses of the data showed that the E/L ratios were positively correlated with body sizes of the fish, but negatively correlated with the hepatic concentrations of p,p'-DDMU and p,p'-DDM in females; suggesting the influences of fish sizes and the mother body residues on their maternal transfer efficiencies.

Halogenated flame retardants in wild, prey-sized mud carp from an e-waste recycling site in South China, 2006-2016: Residue dynamics and ecological risk assessment.

The crude e-waste recycling has been regulated in China since the late 2000s; however, information on the recent levels and the ecological risks of e-waste derived contaminants such as halogenated flame retardants (HFRs) in the e-waste sites are limited. We therefore examined the concentrations of several HFRs in wild, prey-sized mud carps collected from a typical e-waste site in 2006, 2011 and 2016, to understand the exposure dynamics and ecological risk of these chemicals. Several ecological and biological parameters including δ15N, δ13C, body size and lipid content of the fish were also examined, to ensure an overall uniformity of the sample set among the sampling years. Among the HFRs measured, polybrominated diphenyl ethers (PBDEs) were detected at the highest concentrations (contributing >90% to ∑HFRs), followed by Dechlorane Plus (DPs), polybrominated biphenyls (PBBs), and alternative brominated flame retardants (ABFRs). The fish concentrations of ∑PBDEs, ∑PBBs and ∑DPs significantly dropped by 65%, 57% and 53% from 2006 to 2011, and 12%, 74% and 51% from 2011 to 2016, respectively; likely reflecting the positive impact of the environmental regulations on crude e-waste recycling. The ∑ABFRs concentrations were also decreased by 80% from 2006 to 2011, but increased by 127% from 2011 to 2016; suggesting possible fresh input of these novel HFRs in recent years. In addition to the changes in the HFR concentrations, contaminant profiles in the fish were also changed, possibly due to environmental degradation of the HFRs. Despite our conservative method of risk assessment, we found that PBDEs posed an important risk both for the mud carp and for piscivorous wildlife that inhabit the e-waste site.

Bioaccumulation characteristics of PBDEs and alternative brominated flame retardants in a wild frog-eating snake.

While a large body of studies have examined polybrominated diphenyl ethers (PBDEs) and alternative brominated flame retardants (ABFRs) in wildlife, information on the bioaccumulation of these contaminants in reptiles in general, and snakes in particular, are scarce. We investigated the bioaccumulation characteristics of PBDEs and several ABFRs including decabromodiphenyl ethane (DBDPE), 1,2-bis(2,4,6-tribromophenoxy) ethane (BTBPE), hexabromobenzene (HBB) and pentabromotoluene (PBT) in a frog-eating snake, the striped keelback snake (Amphiesma stolata), from an e-waste recycling site in South China. The concentrations of ∑PBDEs and ∑ABFRs in the snakes ranged 53-5200 and 3.1-87 ng/g lipid weight, respectively; with higher levels in males than females. Additionally, the concentrations of BDE-28, -47, and -66 were positively correlated with snake size (snout-vent length and body mass), while negative correlations were found for most of the higher brominated PBDE congeners and HBB, PBT and BTBPE. The biomagnification factors (BMFs) estimated in the snake/frog relationship indicated a mild to moderate biomagnification of BDE-28, -47, -66, -100, -153 and -154 (with mean BMFs of 1.1-5.3), while a lack of magnification for the other PBDE congeners and all the ABFRs. This is the first report on the sex- and size-related accumulation and biomagnification potentials of PBDEs and ABFRs in snakes.

Dechlorane Plus flame retardant in a contaminated frog species: Biomagnification and isomer-specific transfer from females to their eggs.

While flame retardant Dechlorane Plus (DP) and its dechlorinated analogs have been frequently detected in wildlife, knowledge is limited on their bioaccumulation and maternal transfer in amphibians. In the present study, the occurrence of syn- and anti-DP isomers and a DP dechlorinated compound, anti-Cl11-DP, were investigated in frogs and insects collected from the paddy field of a highly contaminated site. The concentrations of ∑DP (the sum concentrations of syn- and anti-DP) in the frog muscle, liver, and eggs were 141 ±â€¯24.7, 454 ±â€¯73.9, and 184 ±â€¯31.1 ng/g lipid weight, respectively; with significantly higher levels in the males than females. The syn-, anti- and anti-Cl11-DP were all detectable in the frog eggs, demonstrating their maternal transfer in female frogs. The concentration ratios between eggs and liver pairs were 0.49 ±â€¯0.01, 0.35 ±â€¯0.01, and 0.53 ±â€¯0.06 for syn-DP, anti-DP, and anti-Cl11-DP, respectively. The values of fanti (the concentration of anti-DP relative to the sum concentration of DP) differed significantly between frog tissues (0.33-0.79) and insects (0.71-0.74), indicating isomer-specific bioaccumulation of DP in the frogs. The concentration ratios of the frogs to the insects were greater than 1 for all the DP-related compounds, suggesting a possibility of biomagnification of these chemicals in the frogs.