Search | VHL Search Portal

1.

Author Correction: Structural insights into the activation of metabotropic glutamate receptors.

Koehl, Antoine; Hu, Hongli; Feng, Dan; Sun, Bingfa; Zhang, Yan; Robertson, Michael J; Chu, Matthew; Kobilka, Tong Sun; Laeremans, Toon; Steyaert, Jan; Tarrasch, Jeffrey; Dutta, Somnath; Fonseca, Rasmus; Weis, William I; Mathiesen, Jesper M; Skiniotis, Georgios; Kobilka, Brian K.

Nature ; 567(7747): E10, 2019 Mar.

Article in English | MEDLINE | ID: mdl-30814739

2.

Conformational transitions of a neurotensin receptor 1-G_i1 complex.

Kato, Hideaki E; Zhang, Yan; Hu, Hongli; Suomivuori, Carl-Mikael; Kadji, Francois Marie Ngako; Aoki, Junken; Krishna Kumar, Kaavya; Fonseca, Rasmus; Hilger, Daniel; Huang, Weijiao; Latorraca, Naomi R; Inoue, Asuka; Dror, Ron O; Kobilka, Brian K; Skiniotis, Georgios.

Nature ; 572(7767): 80-85, 2019 08.

Article in English | MEDLINE | ID: mdl-31243364

3.

Structural insights into the activation of metabotropic glutamate receptors.

Koehl, Antoine; Hu, Hongli; Feng, Dan; Sun, Bingfa; Zhang, Yan; Robertson, Michael J; Chu, Matthew; Kobilka, Tong Sun; Laeremans, Toon; Steyaert, Jan; Tarrasch, Jeffrey; Dutta, Somnath; Fonseca, Rasmus; Weis, William I; Mathiesen, Jesper M; Skiniotis, Georgios; Kobilka, Brian K.

Nature ; 566(7742): 79-84, 2019 02.

Article in English | MEDLINE | ID: mdl-30675062

4.

Diverse GPCRs exhibit conserved water networks for stabilization and activation.

Venkatakrishnan, A J; Ma, Anthony K; Fonseca, Rasmus; Latorraca, Naomi R; Kelly, Brendan; Betz, Robin M; Asawa, Chaitanya; Kobilka, Brian K; Dror, Ron O.

Proc Natl Acad Sci U S A ; 116(8): 3288-3293, 2019 02 19.

Article in English | MEDLINE | ID: mdl-30728297

5.

Collision-free poisson motion planning in ultra high-dimensional molecular conformation spaces.

Fonseca, Rasmus; Budday, Dominik; van den Bedem, Henry.

J Comput Chem ; 39(12): 711-720, 2018 05 05.

Article in English | MEDLINE | ID: mdl-29315667

6.

Fast, clash-free RNA conformational morphing using molecular junctions.

Héliou, Amélie; Budday, Dominik; Fonseca, Rasmus; van den Bedem, Henry.

Bioinformatics ; 33(14): 2114-2122, 2017 Jul 15.

Article in English | MEDLINE | ID: mdl-28334257

7.

Frustration-guided motion planning reveals conformational transitions in proteins.

Budday, Dominik; Fonseca, Rasmus; Leyendecker, Sigrid; van den Bedem, Henry.

Proteins ; 85(10): 1795-1807, 2017 Oct.

Article in English | MEDLINE | ID: mdl-28597937

8.

Characterizing RNA ensembles from NMR data with kinematic models.

Fonseca, Rasmus; Pachov, Dimitar V; Bernauer, Julie; van den Bedem, Henry.

Nucleic Acids Res ; 42(15): 9562-72, 2014 Sep.

Article in English | MEDLINE | ID: mdl-25114056

9.

Predicting dihedral angle probability distributions for protein coil residues from primary sequence using neural networks.

Helles, Glennie; Fonseca, Rasmus.

BMC Bioinformatics ; 10: 338, 2009 Oct 16.

Article in English | MEDLINE | ID: mdl-19835576

10.

Driving Structural Transitions in Molecular Simulations Using the Nonequilibrium Candidate Monte Carlo.

Kurut, Anil; Fonseca, Rasmus; Boomsma, Wouter.

J Phys Chem B ; 122(3): 1195-1204, 2018 01 25.

Article in English | MEDLINE | ID: mdl-29260565

11.

qFit-ligand Reveals Widespread Conformational Heterogeneity of Drug-Like Molecules in X-Ray Electron Density Maps.

van Zundert, Gydo C P; Hudson, Brandi M; de Oliveira, Saulo H P; Keedy, Daniel A; Fonseca, Rasmus; Heliou, Amelie; Suresh, Pooja; Borrelli, Kenneth; Day, Tyler; Fraser, James S; van den Bedem, Henry.

J Med Chem ; 61(24): 11183-11198, 2018 12 27.

Article in English | MEDLINE | ID: mdl-30457858

12.

Probing RNA Native Conformational Ensembles with Structural Constraints.

Fonseca, Rasmus; van den Bedem, Henry; Bernauer, Julie.

J Comput Biol ; 23(5): 362-71, 2016 05.

Article in English | MEDLINE | ID: mdl-27028235

13.

Coupled Motions in ß2AR:Gαs Conformational Ensembles.

Pachov, Dimitar V; Fonseca, Rasmus; Arnol, Damien; Bernauer, Julie; van den Bedem, Henry.

J Chem Theory Comput ; 12(3): 946-56, 2016 Mar 08.

Article in English | MEDLINE | ID: mdl-26756780

14.

Adjustable chain trees for proteins.

Winter, Pawel; Fonseca, Rasmus.

J Comput Biol ; 19(1): 83-99, 2012 Jan.

Article in English | MEDLINE | ID: mdl-21548812

15.

Bounding volumes for proteins: a comparative study.

Fonseca, Rasmus; Winter, Pawel.

J Comput Biol ; 19(10): 1203-13, 2012 Oct.

Article in English | MEDLINE | ID: mdl-23057827

VHL Search Portal

Information and Knowledge for Health

Config filters

Your selection (0)

Export format:

Export: