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1.
Int J Gynecol Cancer ; 25(9): 1608-15, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26501436

ABSTRACT

OBJECTIVES: Epithelial ovarian cancer is characterized by nonspecific signs and clinical symptoms arising at late stages. Early detection is therefore important and may significantly improve the survival rate. Cancer antigen 125 (CA125) has been the most extensively studied serum biomarker in epithelial ovarian cancer, but low specificity limits its usefulness. A relatively novel biomarker, human epididymis protein 4 (HE4), has shown promise in early detection of the disease. The aim of this study was to investigate how early the tumor marker increases before diagnosis. METHODS/MATERIALS: A nested case-control design was used to evaluate the performance of HE4 and CA125 in prediagnostic serum samples from the Janus Serumbank. Serial specimens from 120 women with invasive epithelial ovarian cancer were compared with healthy controls. Serum level of CA125, HE4, and cotinine was measured. Spearman correlation and multiple linear regression analyses were used to investigate impact of smoking, age, storage time, and lag time (time from sampling until date of diagnosis). RESULTS: Spearman correlation showed a strong positive correlation between HE4 and smoking in both cases and controls. Multiple linear regression analyses for pairwise differences between case and control showed that serum level of HE4 and CA125 was significantly increased (P = 0.002 and P < 0.001, respectively) 2 years before diagnosis and that CA125 also was significantly increased up to 4 years before diagnosis (P = 0.002). CONCLUSIONS: The present study showed that a difference between cases and controls in serum concentration of HE4 seemed to be increased 2 years before diagnosis and that CA125 was increased until 4 years before diagnosis.


Subject(s)
Early Detection of Cancer/methods , Neoplasms, Glandular and Epithelial/blood , Neoplasms, Glandular and Epithelial/diagnosis , Ovarian Neoplasms/blood , Ovarian Neoplasms/diagnosis , Proteins/metabolism , Biological Specimen Banks , CA-125 Antigen/blood , Carcinoma, Ovarian Epithelial , Case-Control Studies , Cotinine/blood , Female , Humans , Middle Aged , Norway , Smoking/blood , Time Factors , WAP Four-Disulfide Core Domain Protein 2
2.
Sci Rep ; 8(1): 2117, 2018 02 01.
Article in English | MEDLINE | ID: mdl-29391424

ABSTRACT

Workflows capable of determining glycopeptides in large-scale are missing in the field of glycoproteomics. We present an approach for automated annotation of intact glycopeptide mass spectra. The steps in adopting the Mascot search engine for intact glycopeptide analysis included: (i) assigning one letter codes for monosaccharides, (ii) linearizing glycan sequences and (iii) preparing custom glycoprotein databases. Automated annotation of both N- and O-linked glycopeptides was proven using standard glycoproteins. In a large-scale study, a total of 257 glycoproteins containing 970 unique glycosylation sites and 3447 non-redundant N-linked glycopeptide variants were identified in 24 serum samples. Thus, a single tool was developed that collectively allows the (i) elucidation of N- and O-linked glycopeptide spectra, (ii) matching glycopeptides to known protein sequences, and (iii) high-throughput, batch-wise analysis of large-scale glycoproteomics data sets.


Subject(s)
Databases, Factual , Glycopeptides/blood , Glycoproteins/blood , Prostatic Neoplasms/blood , Search Engine , Case-Control Studies , Glycosylation , Humans , Male
3.
Sci Rep ; 8(1): 9771, 2018 Jun 22.
Article in English | MEDLINE | ID: mdl-29934554

ABSTRACT

A correction to this article has been published and is linked from the HTML and PDF versions of this paper. The error has been fixed in the paper.

4.
BMJ Open ; 8(3): e019309, 2018 03 30.
Article in English | MEDLINE | ID: mdl-29602840

ABSTRACT

INTRODUCTION: Bladder cancer (BC) (including renal pelvis, ureter and urethra) is one of the most common urogenital cancers and the fourth most frequent cancer in men in the USA. In Norway, the incidence of BC has increased over the last decades. The age-standardised incidence rates per 100 000 for 2011-2015 were 53.7 in men and 16.5 in women. Compared to the 5-year period 2006-2010, the percentage increase in incidence was 6.1% in men and 12.3% in women. The recurrence rate of BC is over 50%, the highest recurrence rate of any malignancy. Smoking and occupational exposure to aromatic amines are recognised as the major risk factors. Recently, low-serum level of 25-hydroxy vitamin D (25(OH)D) and obesity have been suggested to increase the BC risk, and leptin, which is important in weight regulation, may be involved in bladder carcinogenesis. More knowledge on potential risk factors for BC is necessary for planning and implementing primary prevention measures. METHODS AND ANALYSES: Cohort and nested case-control studies will be carried out using the population-based Janus Serum Bank Cohort consisting of prediagnostic sera, clinical measurement data (body height and weight, body surface area and weight change over time, blood pressure, cholesterol and triglycerides) and self-reported information on lifestyle factors (smoking, physical activity). Participants were followed from cohort inclusion (1972-2003) through 2014. The cohort will be linked to the Cancer Registry of Norway (cancer data), the National Cause of Death Registry (date and cause of death), National Population Registry (vital status) and Statistic Norway (education and occupation). Serum samples will be analysed for 25(OH)D, vitamin D binding protein, leptin, albumin, calcium and parathyroid hormone. Cox regression and conditional logistic regression models and mediation analysis will be used to estimate association between the exposures and BC. ETHICS AND DISSEMINATION: The study has been approved by the Regional Committee for Medical Research Ethics and is funded by the Norwegian Cancer Society. Results will be published in peer-reviewed journals, at scientific conferences and through press releases.


Subject(s)
Leptin , Obesity , Urinary Bladder Neoplasms , Vitamin D , Female , Humans , Incidence , Leptin/blood , Male , Norway , Obesity/complications , Obesity/epidemiology , Prospective Studies , Risk Factors , Survival Analysis , Urinary Bladder Neoplasms/blood , Urinary Bladder Neoplasms/complications , Urinary Bladder Neoplasms/epidemiology , Vitamin D/blood
5.
Cancer Epidemiol Biomarkers Prev ; 14(2): 385-9, 2005 Feb.
Article in English | MEDLINE | ID: mdl-15734962

ABSTRACT

OBJECTIVE: We assessed the risk of prostate cancer by exposure to Chlamydia trachomatis. METHOD: Seven hundred thirty eight cases of prostate cancer and 2,271 matched controls were identified from three serum sample banks in Finland, Norway, and Sweden by linkage to the population based cancer registries. RESULTS: A statistically significant inverse association (odds ratio, 0.69; 95% confidence interval, 0.51-0.94) was found. It was consistent by different serotypes and there was a consistent dose-response relationship. CONCLUSION: C. trachomatis infection is not likely to increase the risk of prostate cancer. Whether the inverse relationship is true or due to difficulties in measuring the true exposure in prostatic tissue by serology, confounders or other sources of error remain open.


Subject(s)
Chlamydia Infections/complications , Chlamydia trachomatis , Prostatic Neoplasms/microbiology , Adult , Antibodies, Bacterial/blood , Case-Control Studies , Chlamydia Infections/diagnosis , Chlamydia trachomatis/immunology , Chlamydophila Infections/complications , Chlamydophila Infections/diagnosis , Chlamydophila pneumoniae/immunology , Finland/epidemiology , Humans , Male , Middle Aged , Norway/epidemiology , Prostatic Neoplasms/blood , Prostatic Neoplasms/epidemiology , Risk Factors , Sweden/epidemiology
6.
Int J Cancer ; 121(5): 1098-102, 2007 Sep 01.
Article in English | MEDLINE | ID: mdl-17471560

ABSTRACT

The human polyomaviruses JC virus (JCV) and BK virus (BKV) are oncogenic in experimental systems and commonly infect humans. JCV DNA has been reported to be present in human colon mucosa and in colorectal cancers. To investigate whether the risk for colorectal cancer is associated with JCV or BKV infection, we performed a case-control study nested in the Janus biobank, a cohort of 330,000 healthy Norwegian subjects. A 30-year prospective follow-up using registry linkages identified 386 men with colorectal cancer who had baseline serum samples taken >3 months before diagnosis. Control subjects were matched for sex, age and date of blood sampling and county of residence. Seropositivity for JCV or BKV had high (97-100%) sensitivity for detection of viral DNA-positive subjects and discriminated the different polyomaviruses. Seropositivity was mostly stable over time in serial samples. The relative risk for colorectal cancer among JCV seropositive subjects was 0.9 (95% CI: 0.7-1.3) and the BKV-associated relative risk was 1.1 (95% CI: 0.8-1.5). Determining seropositivity using alternative cutoffs also found no evidence of excess risk. In summary, this prospective study found no association between JCV or BKV infections and excess risk for colorectal cancer.


Subject(s)
Colorectal Neoplasms/epidemiology , JC Virus/isolation & purification , Adult , Aged , Aged, 80 and over , Case-Control Studies , Colorectal Neoplasms/virology , Humans , Male , Middle Aged , Population Surveillance , Prospective Studies , Risk Factors , Sensitivity and Specificity
7.
Anal Chem ; 76(15): 4406-9, 2004 Aug 01.
Article in English | MEDLINE | ID: mdl-15283579

ABSTRACT

Analysis of DNA variation in biological samples most frequently utilizes the polymerase chain reaction (PCR) performed on extracted genomic DNA, followed by visualization of alleles using various methodologies. Few reports have demonstrated that amplification of DNA from plasma and serum samples is possible. We have performed DNA amplification on a large set of serum samples (n = 2955). Here, we report that known hereditary mutations in the BRCA gene can efficiently be analyzed in serum samples collected and stored over several decades. Fragments were PCR-amplified following a short initial denaturation of the serum sample in a standard microwave oven. Fragment analysis was subsequently performed using a DNA capillary-sequencing instrument. The PCR success rates were fragment- and size-dependent ranging from 83.2% to 97.9%. Of the 11,820 polymerase chain reactions performed, the overall PCR success rate was 91.3% (10,796/11,820), which is comparable to PCR performed on genomic DNA. The advantage of the method described herein is its ability to utilize archival material stored in serum biobanks for long periods of time.


Subject(s)
DNA/genetics , Genes, BRCA1 , Mutation , Base Sequence , DNA/blood , DNA/isolation & purification , DNA Primers , Germ-Line Mutation , Humans , Polymerase Chain Reaction , Sequence Deletion
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