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1.
MAGMA ; 31(3): 399-414, 2018 Jun.
Article in English | MEDLINE | ID: mdl-29372469

ABSTRACT

OBJECTIVE: Our aim was to develop and validate a 3D Cartesian Look-Locker [Formula: see text] mapping technique that achieves high accuracy and whole-liver coverage within a single breath-hold. MATERIALS AND METHODS: The proposed method combines sparse Cartesian sampling based on a spatiotemporally incoherent Poisson pattern and k-space segmentation, dedicated for high-temporal-resolution imaging. This combination allows capturing tissue with short relaxation times with volumetric coverage. A joint reconstruction of the 3D + inversion time (TI) data via compressed sensing exploits the spatiotemporal sparsity and ensures consistent quality for the subsequent multistep [Formula: see text] mapping. Data from the National Institute of Standards and Technology (NIST) phantom and 11 volunteers, along with reference 2D Look-Locker acquisitions, are used for validation. 2D and 3D methods are compared based on [Formula: see text] values in different abdominal tissues at 1.5 and 3 T. RESULTS: [Formula: see text] maps obtained from the proposed 3D method compare favorably with those from the 2D reference and additionally allow for reformatting or volumetric analysis. Excellent agreement is shown in phantom [bias[Formula: see text] < 2%, bias[Formula: see text] < 5% for (120; 2000) ms] and volunteer data (3D and 2D deviation < 4% for liver, muscle, and spleen) for clinically acceptable scan (20 s) and reconstruction times (< 4 min). CONCLUSION: Whole-liver [Formula: see text] mapping with high accuracy and precision is feasible in one breath-hold using spatiotemporally incoherent, sparse 3D Cartesian sampling.


Subject(s)
Breath Holding , Image Interpretation, Computer-Assisted , Imaging, Three-Dimensional , Magnetic Resonance Imaging , Abdomen , Adult , Aged , Algorithms , Calibration , Female , Healthy Volunteers , Humans , Image Enhancement , Male , Middle Aged , Models, Statistical , Phantoms, Imaging , Poisson Distribution , Reproducibility of Results , Signal-To-Noise Ratio , Time Factors
2.
MAGMA ; 31(1): 19-31, 2018 Feb.
Article in English | MEDLINE | ID: mdl-28550650

ABSTRACT

OBJECTIVES: Our objectives were to evaluate a single-breath-hold approach for Cartesian 3-D CINE imaging of the left ventricle with a nearly isotropic resolution of [Formula: see text] and a breath-hold duration of [Formula: see text]19 s against a standard stack of 2-D CINE slices acquired in multiple breath-holds. Validation is performed with data sets from ten healthy volunteers. MATERIALS AND METHODS: A Cartesian sampling pattern based on the spiral phyllotaxis and a compressed sensing reconstruction method are proposed to allow 3-D CINE imaging with high acceleration factors. The fully integrated reconstruction uses multiple graphics processing units to speed up the reconstruction. The 2-D CINE and 3-D CINE are compared based on ventricular function parameters, contrast-to-noise ratio and edge sharpness measurements. RESULTS: Visual comparisons of corresponding short-axis slices of 2-D and 3-D CINE show an excellent match, while 3-D CINE also allows reformatting to other orientations. Ventricular function parameters do not significantly differ from values based on 2-D CINE imaging. Reconstruction times are below 4 min. CONCLUSION: We demonstrate single-breath-hold 3-D CINE imaging in volunteers and three example patient cases, which features fast reconstruction and allows reformatting to arbitrary orientations.


Subject(s)
Cardiac Imaging Techniques/methods , Heart Ventricles/diagnostic imaging , Magnetic Resonance Imaging, Cine/methods , Adult , Aged , Algorithms , Breath Holding , Cardiac Imaging Techniques/statistics & numerical data , Data Compression , Female , Healthy Volunteers , Humans , Image Interpretation, Computer-Assisted/methods , Magnetic Resonance Imaging, Cine/statistics & numerical data , Male , Middle Aged , Signal-To-Noise Ratio , Ventricular Function, Left , Young Adult
3.
Proc Natl Acad Sci U S A ; 112(18): E2395-402, 2015 May 05.
Article in English | MEDLINE | ID: mdl-25897021

ABSTRACT

Retinal vascular diseases are important causes of vision loss. A detailed evaluation of the vascular abnormalities facilitates diagnosis and treatment in these diseases. Optical coherence tomography (OCT) angiography using the highly efficient split-spectrum amplitude decorrelation angiography algorithm offers an alternative to conventional dye-based retinal angiography. OCT angiography has several advantages, including 3D visualization of retinal and choroidal circulations (including the choriocapillaris) and avoidance of dye injection-related complications. Results from six illustrative cases are reported. In diabetic retinopathy, OCT angiography can detect neovascularization and quantify ischemia. In age-related macular degeneration, choroidal neovascularization can be observed without the obscuration of details caused by dye leakage in conventional angiography. Choriocapillaris dysfunction can be detected in the nonneovascular form of the disease, furthering our understanding of pathogenesis. In choroideremia, OCT's ability to show choroidal and retinal vascular dysfunction separately may be valuable in predicting progression and assessing treatment response. OCT angiography shows promise as a noninvasive alternative to dye-based angiography for highly detailed, in vivo, 3D, quantitative evaluation of retinal vascular abnormalities.


Subject(s)
Eye Diseases/diagnosis , Fluorescein Angiography/methods , Tomography, Optical Coherence/methods , Vascular Diseases/diagnosis , Algorithms , Cell Proliferation , Choroid/blood supply , Choroidal Neovascularization/pathology , Choroideremia/pathology , Diabetic Retinopathy/pathology , Eye Diseases/physiopathology , Fluorescent Dyes/chemistry , Fundus Oculi , Humans , Macular Degeneration/pathology , Perfusion , Retinal Vessels/pathology , Vascular Diseases/physiopathology
4.
MAGMA ; 30(2): 189-202, 2017 Apr.
Article in English | MEDLINE | ID: mdl-27822655

ABSTRACT

OBJECTIVES: Our aim was to demonstrate the benefits of using locally low-rank (LLR) regularization for the compressed sensing reconstruction of highly-accelerated quantitative water-fat MRI, and to validate fat fraction (FF) and [Formula: see text] relaxation against reference parallel imaging in the abdomen. MATERIALS AND METHODS: Reconstructions using spatial sparsity regularization (SSR) were compared to reconstructions with LLR and the combination of both (LLR+SSR) for up to seven fold accelerated 3-D bipolar multi-echo GRE imaging. For ten volunteers, the agreement with the reference was assessed in FF and [Formula: see text] maps. RESULTS: LLR regularization showed superior noise and artifact suppression compared to reconstructions using SSR. Remaining residual artifacts were further reduced in combination with SSR. Correlation with the reference was excellent for FF with [Formula: see text] = 0.99 (all methods) and good for [Formula: see text] with [Formula: see text] = [0.93, 0.96, 0.95] for SSR, LLR and LLR+SSR. The linear regression gave slope and bias (%) of (0.99, 0.50), (1.01, 0.19) and (1.01, 0.10), and the hepatic FF/[Formula: see text] standard deviation was 3.5%/12.1 s[Formula: see text], 1.9%/6.4 s[Formula: see text] and 1.8%/6.3 s[Formula: see text] for SSR, LLR and LLR+SSR, indicating the least bias and highest SNR for LLR+SSR. CONCLUSION: A novel reconstruction using both spatial and spectral regularization allows obtaining accurate FF and [Formula: see text] maps for prospectively highly accelerated acquisitions.


Subject(s)
Adipose Tissue/diagnostic imaging , Image Processing, Computer-Assisted , Imaging, Three-Dimensional , Magnetic Resonance Imaging/methods , Adipose Tissue/metabolism , Adult , Algorithms , Artifacts , Echo-Planar Imaging , Female , Humans , Image Enhancement , Image Interpretation, Computer-Assisted , Male , Middle Aged , Models, Statistical , Programming Languages , Signal-To-Noise Ratio , Water
5.
Retina ; 36 Suppl 1: S93-S101, 2016 Dec.
Article in English | MEDLINE | ID: mdl-28005667

ABSTRACT

PURPOSE: To develop a robust, sensitive, and fully automatic algorithm to quantify diabetes-related capillary dropout using optical coherence tomography (OCT) angiography (OCTA). METHODS: A 1,050-nm wavelength, 400 kHz A-scan rate swept-source optical coherence tomography prototype was used to perform volumetric optical coherence tomography angiography imaging over 3 mm × 3 mm fields in normal controls (n = 5), patients with diabetes without diabetic retinopathy (DR) (n = 7), patients with nonproliferative diabetic retinopathy (NPDR) (n = 9), and patients with proliferative diabetic retinopathy (PDR) (n = 5); for each patient, one eye was imaged. A fully automatic algorithm to quantify intercapillary areas was developed. RESULTS: Of the 26 evaluated eyes, the segmentation was successful in 22 eyes (85%). The mean values of the 10 and 20 largest intercapillary areas, either including or excluding the foveal avascular zone, showed a consistent trend of increasing size from normal control eyes, to eyes with diabetic retinopathy but without diabetic retinopathy, to nonproliferative diabetic retinopathy eyes, and finally to PDR eyes. CONCLUSION: Optical coherence tomography angiography-based screening and monitoring of patients with diabetic retinopathy is critically dependent on automated vessel analysis. The algorithm presented was able to automatically extract an intercapillary area-based metric in patients having various stages of diabetic retinopathy. Intercapillary area-based approaches are likely more sensitive to early stage capillary dropout than vascular density-based methods.


Subject(s)
Capillaries/diagnostic imaging , Diabetes Mellitus, Type 1/diagnostic imaging , Diabetes Mellitus, Type 2/diagnostic imaging , Diabetic Retinopathy/diagnostic imaging , Retinal Vessels/diagnostic imaging , Algorithms , Case-Control Studies , Humans , Retrospective Studies , Tomography, Optical Coherence/methods
6.
Retina ; 36 Suppl 1: S118-S126, 2016 Dec.
Article in English | MEDLINE | ID: mdl-28005670

ABSTRACT

PURPOSE: Currently available optical coherence tomography angiography systems provide information about blood flux but only limited information about blood flow speed. The authors develop a method for mapping the previously proposed variable interscan time analysis (VISTA) algorithm into a color display that encodes relative blood flow speed. METHODS: Optical coherence tomography angiography was performed with a 1,050 nm, 400 kHz A-scan rate, swept source optical coherence tomography system using a 5 repeated B-scan protocol. Variable interscan time analysis was used to compute the optical coherence tomography angiography signal from B-scan pairs having 1.5 millisecond and 3.0 milliseconds interscan times. The resulting VISTA data were then mapped to a color space for display. RESULTS: The authors evaluated the VISTA visualization algorithm in normal eyes (n = 2), nonproliferative diabetic retinopathy eyes (n = 6), proliferative diabetic retinopathy eyes (n = 3), geographic atrophy eyes (n = 4), and exudative age-related macular degeneration eyes (n = 2). All eyes showed blood flow speed variations, and all eyes with pathology showed abnormal blood flow speeds compared with controls. CONCLUSION: The authors developed a novel method for mapping VISTA into a color display, allowing visualization of relative blood flow speeds. The method was found useful, in a small case series, for visualizing blood flow speeds in a variety of ocular diseases and serves as a step toward quantitative optical coherence tomography angiography.


Subject(s)
Diabetic Retinopathy/physiopathology , Geographic Atrophy/physiopathology , Algorithms , Blood Flow Velocity/physiology , Case-Control Studies , Choroid/blood supply , Computed Tomography Angiography/methods , Diabetic Retinopathy/diagnostic imaging , Geographic Atrophy/diagnostic imaging , Humans , Middle Aged , Multimodal Imaging , Tomography, Optical Coherence/methods
7.
Magn Reson Med ; 73(5): 1885-95, 2015 May.
Article in English | MEDLINE | ID: mdl-24912763

ABSTRACT

PURPOSE: To combine weighted iterative reconstruction with self-navigated free-breathing coronary magnetic resonance angiography for retrospective reduction of respiratory motion artifacts. METHODS: One-dimensional self-navigation was improved for robust respiratory motion detection and the consistency of the acquired data was estimated on the detected motion. Based on the data consistency, the data fidelity term of iterative reconstruction was weighted to reduce the effects of respiratory motion. In vivo experiments were performed in 14 healthy volunteers and the resulting image quality of the proposed method was compared to a navigator-gated reference in terms of acquisition time, vessel length, and sharpness. RESULT: Although the sampling pattern of the proposed method contained 60% more samples with respect to the reference, the scan efficiency was improved from 39.5 ± 10.1% to 55.1 ± 9.1%. The improved self-navigation showed a high correlation to the standard navigator signal and the described weighting efficiently reduced respiratory motion artifacts. Overall, the average image quality of the proposed method was comparable to the navigator-gated reference. CONCLUSION: Self-navigated coronary magnetic resonance angiography was successfully combined with weighted iterative reconstruction to reduce the total acquisition time and efficiently suppress respiratory motion artifacts. The simplicity of the experimental setup and the promising image quality are encouraging toward future clinical evaluation.


Subject(s)
Artifacts , Cardiac-Gated Imaging Techniques/methods , Coronary Angiography/methods , Coronary Circulation/physiology , Image Enhancement/methods , Image Processing, Computer-Assisted/methods , Imaging, Three-Dimensional/methods , Magnetic Resonance Angiography/methods , Respiration , Diastole/physiology , Humans , Reference Values , Retrospective Studies , Sensitivity and Specificity , Statistics as Topic , Workflow
8.
MAGMA ; 28(5): 437-46, 2015 Oct.
Article in English | MEDLINE | ID: mdl-25605300

ABSTRACT

OBJECT: The aim of this study was to investigate the acceleration of peripheral Time-of-Flight magnetic resonance angiography using Compressed Sensing and parallel magnetic resonance imaging (MRI) while preserving image quality and vascular contrast. MATERIALS AND METHODS: An analytical sampling pattern is proposed that combines aspects of parallel MRI and Compressed Sensing. It is used in combination with a dedicated Split Bregman algorithm. This approach is compared with current state-of-the-art patterns and reconstruction algorithms. RESULTS: The acquisition time was reduced from 30 to 2.5 min in a study using ten volunteer data sets, while showing improved sharpness, better contrast and higher accuracy compared to state-of-the-art techniques. CONCLUSION: This study showed the benefits of the proposed dedicated analytical sampling pattern and Split Bregman algorithm for optimizing the Compressed Sensing reconstruction of highly accelerated peripheral Time-of-Flight data.


Subject(s)
Artifacts , Data Compression/methods , Image Enhancement/methods , Imaging, Three-Dimensional/methods , Magnetic Resonance Angiography/methods , Peripheral Arterial Disease/pathology , Algorithms , Humans , Image Interpretation, Computer-Assisted/methods , Reproducibility of Results , Sample Size , Sensitivity and Specificity , Signal Processing, Computer-Assisted
9.
J Am Chem Soc ; 136(4): 1609-16, 2014 Jan 29.
Article in English | MEDLINE | ID: mdl-24410182

ABSTRACT

We observe and induce conformational switching of individual molecules via scanning tunneling microscopy (STM) at and close to room temperature. 2H-5,10,15,20-Tetrakis-(3,5-di-tert-butyl)-phenylporphyrin adsorbed on Cu(111) forms a peculiar supramolecular ordered phase in which the molecules arrange in alternating rows, with two distinct appearances in STM which are assigned to concave and convex intramolecular conformations. Around room temperature, frequent bidirectional conformational switching of individual molecules from concave to convex and vice versa is observed. From the temperature dependence, detailed insights into the energy barriers and entropic contributions of the switching processes are deduced. At 200 K, controlled STM tip-induced unidirectional switching is possible, yielding an information storage density of 4.9 × 10(13) bit/inch(2). With this contribution we demonstrate that controlled switching of individual molecules at comparably high temperatures is possible and that entropic effects can be a decisive factor in potential molecular devices at these temperatures.

10.
Ophthalmology ; 121(3): 719-26, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24289918

ABSTRACT

OBJECTIVE: To characterize en face features of the retinal pigment epithelium (RPE) and choroid in eyes with chronic central serous chorioretinopathy (CSCR) using a high-speed, enhanced-depth swept-source optical coherence tomography (SS-OCT) prototype. DESIGN: Consecutive patients with chronic CSCR were prospectively examined with SS-OCT. PARTICIPANTS: Fifteen eyes of 13 patients. METHODS: Three-dimensional 6×6 mm macular cube raster scans were obtained with SS-OCT operating at 1050 nm wavelength and 100000 A-lines/sec with 6 µm axial resolution. Segmentation of the RPE generated a reference surface; en face SS-OCT images of the RPE and choroid were extracted at varying depths every 3.5 µm (1 pixel). Abnormal features were characterized by systematic analysis of multimodal fundus imaging, including color photographs, fundus autofluorescence, fluorescein angiography, and indocyanine-green angiography (ICGA). MAIN OUTCOME MEASURES: En face SS-OCT morphology of the RPE and individual choroidal layers. RESULTS: En face SS-OCT imaging at the RPE level revealed absence of signal corresponding to RPE detachment or RPE loss in 15 of 15 (100%) eyes. En face SS-OCT imaging at the choriocapillaris level showed focally enlarged vessels in 8 of 15 eyes (53%). At the level of Sattler's layer, en face SS-OCT documented focal choroidal dilation in 8 of 15 eyes (53%) and diffuse choroidal dilation in 7 of 15 eyes (47%). At the level of Haller's layer, these same features were observed in 3 of 15 eyes (20%) and 12 of 15 eyes (80%), respectively. In all affected eyes, these choroidal vascular abnormalities were seen just below areas of RPE abnormalities. In 2 eyes with secondary choroidal neovascularization (CNV), distinct en face SS-OCT features corresponded to the neovascular lesions. CONCLUSIONS: High-speed, enhanced-depth SS-OCT at 1050 nm wavelength enables the visualization of pathologic features of the RPE and choroid in eyes with chronic CSCR not usually appreciated with standard spectral domain (SD) OCT. En face SS-OCT imaging seems to be a useful tool in the identification of CNV without the use of angiography. This in vivo documentation of the RPE and choroidal vasculature at variable depths may help elucidate the pathophysiology of disease and can contribute to the diagnosis and management of chronic CSCR.


Subject(s)
Central Serous Chorioretinopathy/diagnosis , Choroid/pathology , Retinal Pigment Epithelium/pathology , Tomography, Optical Coherence , Chronic Disease , Coloring Agents , Female , Fluorescein Angiography , Humans , Indocyanine Green , Male , Middle Aged , Prospective Studies , Visual Acuity
11.
MAGMA ; 27(5): 435-43, 2014 Oct.
Article in English | MEDLINE | ID: mdl-24402560

ABSTRACT

OBJECT: To study a scan protocol for coronary magnetic resonance angiography based on multiple breath-holds featuring 1D motion compensation and to compare the resulting image quality to a navigator-gated free-breathing acquisition. Image reconstruction was performed using L1 regularized iterative SENSE. MATERIALS AND METHODS: The effects of respiratory motion on the Cartesian sampling scheme were minimized by performing data acquisition in multiple breath-holds. During the scan, repetitive readouts through a k-space center were used to detect and correct the respiratory displacement of the heart by exploiting the self-navigation principle in image reconstruction. In vivo experiments were performed in nine healthy volunteers and the resulting image quality was compared to a navigator-gated reference in terms of vessel length and sharpness. RESULTS: Acquisition in breath-hold is an effective method to reduce the scan time by more than 30% compared to the navigator-gated reference. Although an equivalent mean image quality with respect to the reference was achieved with the proposed method, the 1D motion compensation did not work equally well in all cases. CONCLUSION: In general, the image quality scaled with the robustness of the motion compensation. Nevertheless, the featured setup provides a positive basis for future extension with more advanced motion compensation methods.


Subject(s)
Cardiac-Gated Imaging Techniques/methods , Heart/anatomy & histology , Imaging, Three-Dimensional/methods , Magnetic Resonance Angiography/methods , Respiratory-Gated Imaging Techniques/methods , Healthy Volunteers , Humans , Image Enhancement/methods , Image Processing, Computer-Assisted/methods , Movement
12.
Radiology ; 266(3): 912-9, 2013 Mar.
Article in English | MEDLINE | ID: mdl-23297324

ABSTRACT

PURPOSE: To evaluate and compare the technical accuracy and feasibility of magnetic resonance (MR) imaging-enhanced fluoroscopic guidance and real-time MR imaging guidance for percutaneous puncture procedures in phantoms and animals. MATERIALS AND METHODS: The experimental protocol was approved by the institutional animal care and use committee. Punctures were performed in phantoms, aiming for markers (20 each for MR imaging-enhanced fluoroscopic guidance and real-time MR imaging guidance), and pigs, aiming for anatomic landmarks (10 for MR imaging-enhanced fluoroscopic guidance and five for MR imaging guidance). To guide the punctures, T1-weighted three-dimensional (3D) MR images of the phantom or pig were acquired. Additional axial and coronal T2-weighted images were used to visualize the anatomy in the animals. For MR imaging-enhanced fluoroscopic guidance, phantoms and pigs were transferred to the fluoroscopic system after initial MR imaging and C-arm computed tomography (CT) was performed. C-arm CT and MR imaging data sets were coregistered. Prototype navigation software was used to plan a puncture path with use of MR images and to superimpose it on fluoroscopic images. For real-time MR imaging, an interventional MR imaging prototype for interactive real-time section position navigation was used. Punctures were performed within the magnet bore. After completion, 3D MR imaging was performed to evaluate the accuracy of insertions. Puncture durations were compared by using the log-rank test. The Mann-Whitney U test was applied to compare the spatial errors. RESULTS: In phantoms, the mean total error was 8.6 mm ± 2.8 with MR imaging-enhanced fluoroscopic guidance and 4.0 mm ± 1.2 with real-time MR imaging guidance (P < .001). The mean puncture time was 2 minutes 10 seconds ± 44 seconds with MR imaging-enhanced fluoroscopic guidance and 37 seconds ± 14 with real-time MR imaging guidance (P < .001). In the animal study, a tolerable distance (<1 cm) between target and needle tip was observed for both MR imaging-enhanced fluoroscopic guidance and real-time MR imaging guidance. The mean total error was 7.7 mm ± 2.4 with MR imaging-enhanced fluoroscopic guidance and 7.9 mm ± 4.9 with real-time MR imaging guidance (P = .77). The mean puncture time was 5 minutes 43 seconds ± 2 minutes 7 seconds with MR imaging-enhanced fluoroscopic guidance and 5 minutes 14 seconds ± 2 minutes 25 seconds with real-time MR imaging guidance (P = .68). CONCLUSION: Both MR imaging-enhanced fluoroscopic guidance and real-time MR imaging guidance demonstrated reasonable and similar accuracy in guiding needle placement to selected targets in phantoms and animals.


Subject(s)
Biopsy, Needle/methods , Fluoroscopy/methods , Image-Guided Biopsy/methods , Imaging, Three-Dimensional/methods , Magnetic Resonance Imaging/methods , Punctures/methods , Animals , Computer Systems , Feasibility Studies , Phantoms, Imaging , Reproducibility of Results , Sensitivity and Specificity , Swine
13.
Magn Reson Med ; 69(6): 1623-33, 2013 Jun.
Article in English | MEDLINE | ID: mdl-22887025

ABSTRACT

Magnetic resonance angiograms are often nondiagnostic due to patient motion. In clinical practice, the available time to repeat motion-corrupted scans is very limited--especially in patients who suffer from acute cerebrovascular conditions. Here, the feasibility of an optical motion correction system to prospectively correct patient motion for 3D time-of-flight magnetic resonance angiography was investigated. Experiments were performed on five subjects with and without parallel imaging (SENSE R=2) on a 1.5 T unit. Two human readers assessed the data and were in good agreement (kappa: 0.77). The results from this study indicate that the optical motion correction system greatly reduces motion artifacts when motion was present and did not impair the image quality in the absence of motion. Statistical analysis showed no significant difference between the (vendor-provided) SENSE and the nonaccelerated acquisitions. In conclusion, the optical motion correction system tested in this study has the potential to greatly improve 3D time-of-flight angiograms regardless of whether it is used with or without SENSE.


Subject(s)
Artifacts , Brain/physiology , Cerebrovascular Circulation/physiology , Image Enhancement/instrumentation , Imaging, Three-Dimensional/instrumentation , Magnetic Resonance Angiography/instrumentation , Optical Devices , Blood Flow Velocity/physiology , Equipment Design , Equipment Failure Analysis , Humans , Motion , Reproducibility of Results , Sensitivity and Specificity
14.
J Cardiovasc Electrophysiol ; 24(2): 113-20, 2013 Feb.
Article in English | MEDLINE | ID: mdl-23131083

ABSTRACT

BACKGROUND: Despite the advancement of technology in electroanatomic mapping systems (EAMS), fluoroscopy remains a necessary, basic imaging modality for electrophysiology procedures. We present a feasibility study of new software that enables 3D-augmented fluoroscopy in biplane catheterization laboratories for planning and guidance of pulmonary vein isolation (PVI). The computer-assisted overlay registration accuracy was assessed in a clinical setting using an automatic calculation of overlay projection geometry that was derived from hardware sensors in C-arms, detectors, and patient table. METHODS: Consecutive patients (n = 89) underwent left atrium (LA) magnetic resonance imaging MRI scan prior to PVI. Ideal ablation lines encircling the ipsilateral pulmonary veins (PVs) at antral level were drawn onto the segmented LA surface. The 3D-model was superimposed onto biplane fluoroscopy and matched with angiographies of LA and PVs. Three-dimensional-overlay projection geometry was automatically calculated from C-arm, detectors, and table sensors. Accuracy of technique was assessed as alignment of MRI-derived 3D overlay and angiographic LA/PV anatomy. Integrity of registered overlay was quantified using landmark measurements. RESULTS: Alignment offsets were 1.3 ± 1.5 mm in left PV, 1.2 ± 1.5 mm in right PV, and 1.1 ± 1.4 mm in LA roof region. Bravais-Pearson correlation of the landmark measurements was r = 0.978 (s < 0.01), mean offset between landmark distance measurements was 1.4 ± 0.78 mm. Average time needed for overlay registration was 9.5 ± 3.5 seconds. CONCLUSIONS: MRI-derived 3D-augmented fluoroscopy demonstrated a high level of accuracy when compared with LA/PV angiography. The new system could be especially useful to guide procedures not supported by EAMS, such as cryotechnique PVI.


Subject(s)
Atrial Fibrillation/diagnosis , Atrial Fibrillation/surgery , Fluoroscopy/methods , Imaging, Three-Dimensional/methods , Magnetic Resonance Imaging/methods , Pulmonary Veins/surgery , Surgery, Computer-Assisted/methods , Feasibility Studies , Heart Conduction System/diagnostic imaging , Heart Conduction System/pathology , Heart Conduction System/surgery , Humans , Image Interpretation, Computer-Assisted/methods , Male , Middle Aged , Pulmonary Veins/diagnostic imaging , Pulmonary Veins/pathology , Reproducibility of Results , Sensitivity and Specificity , Subtraction Technique , Treatment Outcome
15.
Opt Express ; 21(15): 18021-33, 2013 Jul 29.
Article in English | MEDLINE | ID: mdl-23938673

ABSTRACT

We demonstrate high speed, swept source optical coherence microscopy (OCM) using a MEMS tunable vertical cavity surface-emitting laser (VCSEL) light source. The light source had a sweep rate of 280 kHz, providing a bidirectional axial scan rate of 560 kHz. The sweep bandwidth was 117 nm centered at 1310 nm, corresponding to an axial resolution of 13.1 µm in air, corresponding to 8.1 µm (9.6 µm spectrally shaped) in tissue. Dispersion mismatch from different objectives was compensated numerically, enabling magnification and field of view to be easily changed. OCM images were acquired with transverse resolutions between 0.86 µm - 3.42 µm using interchangeable 40X, 20X and 10X objectives with ~600 µm x 600 µm, ~1 mm x 1 mm and ~2 mm x 2 mm field-of-view (FOV), respectively. Parasitic variations in path length with beam scanning were corrected numerically. These features enable swept source OCM to be integrated with a wide range of existing scanning microscopes. Large FOV mosaics were generated by serially acquiring adjacent overlapping microscopic fields and combining them in post-processing. Fresh human colon, thyroid and kidney specimens were imaged ex vivo and compared to matching histology sections, demonstrating the ability of OCM to image tissue specimens.


Subject(s)
Image Enhancement/instrumentation , Lasers , Lighting/instrumentation , Microscopy/instrumentation , Tomography, Optical Coherence/instrumentation , Equipment Design , Equipment Failure Analysis , Humans
16.
J Magn Reson Imaging ; 37(5): 1202-12, 2013 May.
Article in English | MEDLINE | ID: mdl-23334924

ABSTRACT

PURPOSE: To develop and evaluate software-based methods for improving the workflow of magnetic resonance (MR)-guided percutaneous interventions. MATERIALS AND METHODS: A set of methods was developed that allows the user to: 1) plan an entire procedure, 2) directly apply this plan to skin entry site localization without further imaging, and 3) place a needle under real-time MR guidance with automatic alignment of three orthogonal slices along a planned trajectory with preference to the principal patient axes. To validate targeting accuracy and time, phantom experiments (96 targets) and in vivo paraspinal and kidney needle punctures in two pigs (55 targets) were performed. The influence of trajectory obliquity, level of experience, and organ motion on targeting accuracy and time was analyzed. RESULTS: Mean targeting error was 1.8 ± 0.9 mm (in vitro) and 2.9 ± 1.0 mm (in vivo) in all directions. No statistically significant differences in targeting accuracy between single- and double-oblique trajectories, novice and expert users, or paraspinal and kidney punctures were observed. The average time (in vivo) from trajectory planning to verification of accurate needle placement was 6 minutes. CONCLUSION: The developed methods allow for accurate needle placement along complex trajectories and are anticipated to reduce table time for MR-guided percutaneous needle interventions.


Subject(s)
Ablation Techniques/methods , Biopsy, Needle/methods , Image Interpretation, Computer-Assisted/methods , Image-Guided Biopsy/methods , Injections/methods , Magnetic Resonance Imaging, Interventional/methods , Workflow , Ablation Techniques/instrumentation , Algorithms , Animals , Biopsy, Needle/instrumentation , Feasibility Studies , Image Enhancement/methods , Image-Guided Biopsy/instrumentation , Imaging, Three-Dimensional/methods , Injections/instrumentation , Reproducibility of Results , Sensitivity and Specificity , Software , Swine
17.
Biomed Eng Online ; 12: 52, 2013 Jun 11.
Article in English | MEDLINE | ID: mdl-23758801

ABSTRACT

BACKGROUND: Diagnosis of intestinal metaplasia and dysplasia via conventional endoscopy is characterized by low interobserver agreement and poor correlation with histopathologic findings. Chromoendoscopy significantly enhances the visibility of mucosa irregularities, like metaplasia and dysplasia mucosa. Magnetically guided capsule endoscopy (MGCE) offers an alternative technology for upper GI examination. We expect the difficulties of diagnosis of neoplasm in conventional endoscopy to transfer to MGCE. Thus, we aim to chart a path for the application of chromoendoscopy on MGCE via an ex-vivo animal study. METHODS: We propose a modified preparation protocol which adds a staining step to the existing MGCE preparation protocol. An optimal staining concentration is quantitatively determined for different stain types and pathologies. To that end 190 pig stomach tissue samples with and without lesion imitations were stained with different dye concentrations. Quantitative visual criteria are introduced to measure the quality of the staining with respect to mucosa and lesion visibility. Thusly determined optimal concentrations are tested in an ex-vivo pig stomach experiment under magnetic guidance of an endoscopic capsule with the modified protocol. RESULTS: We found that the proposed protocol modification does not impact the visibility in the stomach or steerability of the endoscopy capsule. An average optimal staining concentration for the proposed protocol was found at 0.4% for Methylene blue and Indigo carmine. The lesion visibility is improved using the previously obtained optimal dye concentration. CONCLUSIONS: We conclude that chromoendoscopy may be applied in MGCE and improves mucosa and lesion visibility. Systematic evaluation provides important information on appropriate staining concentration. However, further animal and human in-vivo studies are necessary.


Subject(s)
Capsule Endoscopy/methods , Coloring Agents/metabolism , Magnetic Phenomena , Animals , Gastric Mucosa/metabolism , Staining and Labeling , Stomach/surgery , Swine
18.
Graefes Arch Clin Exp Ophthalmol ; 251(1): 243-53, 2013 Jan.
Article in English | MEDLINE | ID: mdl-22366916

ABSTRACT

BACKGROUND: In glaucoma, damage of retinal ganglion cells may continue to the linked optic radiations. This study investigates the correlation of glaucoma severity indicators with parameters of axonal and myelin integrity of the optic radiations. METHODS: In this observational case-control study, 13 patients with normal-tension glaucoma, 13 patients with primary open-angle glaucoma, and seven control subjects (mean age, 57.6 ± 12.5 years) were randomly selected for diffusion tensor imaging (DTI) of the optic radiations. The results of the frequency doubling test (FDT) and the HRT-based linear discriminant functions of Burk (BLDF) and Mikelberg (MLDF) were correlated with the mean of the fractional anisotropy (FA), apparent diffusion coefficient (ADC), and radial diffusivity (RD) of the optic radiations. Multiple correlation analysis, corrected for age, stage of cerebral microangiopathy, diagnosis group, and gender was conducted at increasing thresholds of linear anisotropy (C(L)) to reduce mismeasurements because of complex fiber situations. RESULTS: The best correlations were found for BLDF with FA at C(L) threshold 0.3 (0.594, p = 0.001), with ADC at C(L) 0.4 (-0.511, p = 0.005), and with RD at C(L) 0.4 (-0.585, p = 0.001). MLDF correlated with FA at C(L) 0.4 (0.393, p = 0.035). The FDT score correlated with FA at C(L) 0 (-0.491, p = 0.007) and with RD at C(L) 0 (-0.375, p = 0.045). CONCLUSIONS: In glaucoma, DTI-derived parameters of the axonal integrity (FA, ADC) and demyelination (RD) of the optic radiation are linked to HRT-based indices of glaucoma severity and to impairment of the spatial-temporal contrast sensitivity.


Subject(s)
Axons/pathology , Demyelinating Diseases/diagnosis , Diffusion Tensor Imaging , Glaucoma, Open-Angle/diagnosis , Optic Disk/pathology , Optic Nerve Diseases/diagnosis , Retinal Neurons/pathology , Anisotropy , Case-Control Studies , Cerebral Small Vessel Diseases , Female , Humans , Low Tension Glaucoma/diagnosis , Male , Middle Aged , Retinal Ganglion Cells/pathology , Surveys and Questionnaires , Visual Field Tests , Visual Fields
19.
Magn Reson Med ; 67(5): 1237-51, 2012 May.
Article in English | MEDLINE | ID: mdl-21826729

ABSTRACT

Utilization of external motion tracking devices is an emerging technology in head motion correction for MRI. However, cross-calibration between the reference frames of the external tracking device and the MRI scanner can be tedious and remains a challenge in practical applications. In this study, we present two hybrid methods, both of which combine prospective, optical-based motion correction with retrospective entropy-based autofocusing to remove residual motion artifacts. Our results revealed that in the presence of cross-calibration errors between the optical tracking device and the MR scanner, application of retrospective correction on prospectively corrected data significantly improves image quality. As a result of this hybrid prospective and retrospective motion correction approach, the requirement for a high-quality calibration scan can be significantly relaxed, even to the extent that it is possible to perform external prospective motion tracking without any prior cross-calibration step if a crude approximation of cross-calibration matrix exists. Moreover, the motion tracking system, which is used to reduce the dimensionality of the autofocusing problem, benefits the retrospective approach at the same time.


Subject(s)
Artifacts , Brain/anatomy & histology , Head Movements , Image Enhancement/instrumentation , Image Enhancement/methods , Magnetic Resonance Imaging/instrumentation , Magnetic Resonance Imaging/methods , Calibration , Equipment Design , Equipment Failure Analysis , Humans , Magnetic Resonance Imaging/standards , Reproducibility of Results , Sensitivity and Specificity
20.
Opt Express ; 20(4): 4710-25, 2012 Feb 13.
Article in English | MEDLINE | ID: mdl-22418228

ABSTRACT

Amplitude decorrelation measurement is sensitive to transverse flow and immune to phase noise in comparison to Doppler and other phase-based approaches. However, the high axial resolution of OCT makes it very sensitive to the pulsatile bulk motion noise in the axial direction. To overcome this limitation, we developed split-spectrum amplitude-decorrelation angiography (SSADA) to improve the signal-to-noise ratio (SNR) of flow detection. The full OCT spectrum was split into several narrower bands. Inter-B-scan decorrelation was computed using the spectral bands separately and then averaged. The SSADA algorithm was tested on in vivo images of the human macula and optic nerve head. It significantly improved both SNR for flow detection and connectivity of microvascular network when compared to other amplitude-decorrelation algorithms.


Subject(s)
Angiography/methods , Tomography, Optical Coherence/methods , Algorithms , Humans , Imaging, Three-Dimensional , Macula Lutea/blood supply , Optic Disk/blood supply , Signal-To-Noise Ratio , Spectrum Analysis
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