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1.
Environ Res ; 238(Pt 2): 117189, 2023 12 01.
Article in English | MEDLINE | ID: mdl-37742752

ABSTRACT

Rainwater harvesting (RWH) is an essential technique for enhancing agricultural development, particularly in regions facing water scarcity or unreliable rainfall patterns. Water shortage, however, is one of the key causes of low crop production especially in mountainous regions like the Khyber Pakhtunkhwa province where most rainwater is lost by runoff. Therefore, rainwater harvesting could be a suitable to make better use of runoff and increase crop production. The study focuses on selecting suitable rainwater harvesting sites in District Karak to enhance agriculture by utilizing multi-influence factor (MIF) and fuzzy overlay techniques. We considered seven factors, i.e., land use land cover (LULC), slope, geology, soil, rainfall, lineament, drainage density, to create a ranking system to understand its application in site selection analysis. The results were combined into one overlay process to produce a rainwater harvesting suitability map. The weighted overlay analysis of the MIF model results reveals that 167.96 km2 area has a very high potential for rainwater harvesting, 874.17 km2 has a high potential, 1182.92 km2 has a moderate and 354.50 km2 has a poor potential for rainwater harvesting. The fuzzy overlay analysis revealed that 257.53 km2 has a very high potential for rainwater harvesting, 896.56 km2 area is classified as high, 1018.30 km2 moderate, and 407.7 km2 has poor potential for rainwater harvesting. The findings of this research work will help the policymakers and decision-makers construct various rainwater harvesting structures in the study area to overcome the water shortage problems.


Subject(s)
Rain , Water Supply , Agriculture , Soil , Water
2.
Am Heart J ; 248: 108-119, 2022 06.
Article in English | MEDLINE | ID: mdl-35278373

ABSTRACT

BACKGROUND: The contribution of gut dysfunction to heart failure (HF) pathophysiology is not routinely assessed. We sought to investigate whether biomarkers of gut dysfunction would be useful in assessment of HF (eg, severity, adverse outcomes) and risk stratification. METHODS: A panel of gut-related biomarkers including metabolites of the choline/carnitine- pathway (acetyl-L-carnitine, betaine, choline, γ-butyrobetaine, L-carnitine and trimethylamine-N-oxide [TMAO]) and the gut peptide, Trefoil factor-3 (TFF-3), were investigated in 1,783 patients with worsening HF enrolled in the systems BIOlogy Study to TAilored Treatment in Chronic Heart Failure (BIOSTAT-CHF) cohort and associations with HF severity and outcomes, and use in risk stratification were assessed. RESULTS: Metabolites of the carnitine-TMAO pathway (acetyl-L-carnitine, γ-butyrobetaine, L-carnitine, and TMAO) and TFF-3 were associated with the composite outcome of HF hospitalization or all-cause mortality at 3 years (hazards ratio [HR] 2.04-2.93 [95% confidence interval {CI} 1.30-4.71] P≤ .002). Combining the carnitine-TMAO metabolites with TFF-3, as a gut dysfunction panel, showed a graded association; a greater number of elevated markers was associated with higher New York Heart Association class (P< .001), higher plasma concentrations of B-type natriuretic peptide (P< .001), and worse outcome (HR 1.90-4.58 [95% CI 1.19-6.74] P≤ 0.008). Addition of gut dysfunction biomarkers to the contemporary BIOSTAT HF risk model also improved prediction for the aforementioned composite outcome (C-statistics P≤ .011, NRI 13.5-21.1 [95% CI 2.7-31.9] P≤ .014). CONCLUSIONS: A panel of biomarkers of gut dysfunction showed graded association with severity of HF and adverse outcomes. Biomarkers as surrogate markers are potentially useful for assessment of gut dysfunction to HF pathophysiology and in risk stratification.


Subject(s)
Acetylcarnitine , Heart Failure , Biomarkers , Carnitine , Choline , Chronic Disease , Humans
3.
BMC Infect Dis ; 22(1): 807, 2022 Oct 30.
Article in English | MEDLINE | ID: mdl-36310166

ABSTRACT

BACKGROUND: Plasmodium vivax apical membrane antigen-1 (pvama-1) is an important vaccine candidate against Malaria. The genetic composition assessment of pvama-1 from wide-range geography is vital to plan the antigen based vaccine designing against Malaria. METHODS: The blood samples were collected from 84 P. vivax positive malaria patients from different districts of Khyber Pakhtunkhwa (KP) province of Pakistan. The highly polymorphic and immunogenic domain-I (DI) region of pvama-1 was PCR amplified and DNA sequenced. The QC based sequences raw data filtration was done using DNASTAR package. The downstream population genetic analyses were performed using MEGA4, DnaSP, Arlequin v3.5 and Network.5 resources. RESULTS: The analyses unveiled total 57 haplotypes of pvama-1 (DI) in KP samples with majorly prevalent H-14 and H-5 haplotypes. Pairwise comparative population genetics analyses identified limited to moderate genetic distinctions among the samples collected from different districts of KP, Pakistan. In context of worldwide available data, the KP samples depicted major genetic differentiation against the Korean samples with Fst = 0.40915 (P-value = 0.0001), while least distinction was observed against Indian and Iranian samples. The statistically significant negative values of Fu and Li's D* and F* tests indicate the evidence of population expansion and directional positive selection signature. The slow LD decay across the nucleotide distance in KP isolates indicates low nucleotide diversity. In context of reference pvama-1 sequence, the KP samples were identified to have 09 novel non-synonymous single nucleotide polymorphisms (nsSNPs), including several trimorphic and tetramorphic substitutions. Few of these nsSNPs are mapped within the B-cell predicted epitopic motifs of the pvama-1, and possibly modulate the immune response mechanism. CONCLUSION: Low genetic differentiation was observed across the pvama-1 DI among the P. vivax isolates acquired from widespread regions of KP province of Pakistan. The information may implicate in future vaccine designing strategies based on antigenic features of pvama-1.


Subject(s)
Malaria, Vivax , Plasmodium vivax , Humans , Plasmodium vivax/genetics , Iran , Pakistan/epidemiology , DNA, Protozoan/genetics , Antigens, Protozoan/genetics , Protozoan Proteins/genetics , Malaria, Vivax/epidemiology , Genetics, Population , Genetic Variation , Nucleotides , Selection, Genetic , Sequence Analysis, DNA
4.
Molecules ; 27(10)2022 May 18.
Article in English | MEDLINE | ID: mdl-35630719

ABSTRACT

Controlled-release effervescent floating bilayer tablets reduce dosage frequency and improve patient compliance with enhanced therapeutic outcomes. Generally, two different tablets of clarithromycin and esomeprazole, respectively, are given for the treatment of Helicobacter pylori infection and it might be worth incorporating both in a single tablet. In the current study, controlled-release floating bilayer tablets of clarithromycin and esomeprazole (F1−F4) were developed with different rates of polymeric materials by a direct compression method. During the formulation, Fourier-transform infrared spectroscopy (FTIR) analysis was performed for possible interactions between drugs and excipients. No interactions between drugs and excipients were noted. Moreover, the bilayer tablets' thickness, diameter, friability, hardness, weight variation, dissolution, and percent purity were found within the acceptable limits. The floating lag time and total floating time of all formulations were found to be < 25 s and 24 h, respectively. The release of both the clarithromycin and esomeprazole started at the same time from the controlled-release floating bilayer tablets by anomalous non-Fickian diffusion, and the polymeric materials extended the drug release rate up to 24 h. In the case of F1, the results approached ideal zero-order kinetics. The dissolution profiles of the tested and reference tablet formulations were compared, but no significant differences were observed. It can be concluded that such controlled-release effervescent floating bilayer tablets can be efficiently used in clinical practice to reduce dosage frequency and increase patient compliance with continuous drug release for 24 h, which ultimately might enhance therapeutic efficacy.


Subject(s)
Helicobacter Infections , Helicobacter pylori , Clarithromycin/chemistry , Delayed-Action Preparations/chemistry , Esomeprazole , Excipients/chemistry , Humans , Solubility , Tablets
5.
Angew Chem Int Ed Engl ; 61(4): e202114951, 2022 Jan 21.
Article in English | MEDLINE | ID: mdl-34816561

ABSTRACT

The development of highly active and stable bifunctional noble-metal-based electrocatalysts for the hydrogen evolution reaction (HER) and the oxygen evolution reaction (OER) is a crucial goal for clean and renewable energy, which still remains challenging. Herein, we report an efficient and stable catalyst comprising a Co single atom incorporated in an RuO2 sphere for HER and OER, in which the Co single atom in the RuO2 sphere was confirmed by XAS, AC-STEM, and DFT. This tailoring strategy uses a Co single atom to modify the electronic structures of the surrounding Ru atoms and thereby remarkably elevates the electrocatalytic activities. The catalyst requires ultralow overpotentials, 45 mV for HER and 200 mV for OER, to deliver a current density of 10 mA cm-2 . The theoretical calculations reveal that the energy barriers for HER and OER are lowered after incorporation of a cobalt single atom.

6.
Am Heart J ; 234: 71-80, 2021 04.
Article in English | MEDLINE | ID: mdl-33454370

ABSTRACT

BACKGROUND: Trimethylamine N-oxide (TMAO), a gut-related metabolite, is associated with heart failure (HF) outcomes. However, TMAO is the final product of a complex metabolic pathway (ie, choline/carnitine) that has never been entirely investigated in HF. The present study investigates a panel of metabolites involved in the TMAO-choline/carnitine metabolic pathway for their associations with outcome in acute HF patients. METHODS: In total, 806 plasma samples from acute HF patients were analyzed for TMAO, trimethyllysine, L-carnitine, acetyl-L-carnitine, γ-butyrobetaine, crotonobetaine, trimethylamine, betaine aldehyde, choline, and betaine using a developed liquid chromatography-tandem mass spectrometry method. Associations with outcome of all-cause mortality (death) and a composite of all-cause mortality and/or rehospitalization caused by HF (death/HF) at 30 days and 1 year were investigated. RESULTS: TMAO, trimethyllysine, L-carnitine, acetyl-L-carnitine, and γ-butyrobetaine were associated with death and death/HF at 30 days (short term; hazard ratio 1.30-1.49, P≤ .021) and at 1 year (long term; hazard ratio 1.15-1.25, P≤ .026) when adjusted for cardiac risk factors. L-carnitine and acetyl-L-carnitine were superior for short-term outcomes whereas TMAO was the superior metabolite for association with long-term outcomes. Furthermore, acetyl-L-carnitine and L-carnitine were superior for in-hospital mortality and improved risk stratification when combined with current clinical risk scores (ie, Acute Decompensated HEart Failure National REgistry, Organized Program To Initiate Lifesaving Treatment In Hospitalized Patients With Heart Failure, and Get With The Guidelines-Heart Failure; odds ratio (OR) ≥ 1.52, P≤ .020). CONCLUSIONS: Carnitine-related metabolites show associations with adverse outcomes in acute HF, in particular L-carnitine and acetyl-L-carnitine for short-term outcomes, and TMAO for long-term outcomes. Further studies are warranted to investigate the role and implications of carnitine metabolites including intervention in the pathogenesis of HF.


Subject(s)
Carnitine/metabolism , Choline/metabolism , Gastrointestinal Microbiome , Heart Failure/blood , Heart Failure/mortality , Methylamines/metabolism , Acetylcarnitine/blood , Acetylcarnitine/metabolism , Acute Disease , Aged , Aged, 80 and over , Betaine/analogs & derivatives , Betaine/blood , Betaine/metabolism , Carnitine/blood , Choline/blood , Female , Heart Failure/etiology , Hospital Mortality , Humans , Male , Methylamines/blood , Natriuretic Peptide, Brain/blood , Risk Factors , Statistics, Nonparametric
7.
Heart Fail Clin ; 17(3): 397-413, 2021 Jul.
Article in English | MEDLINE | ID: mdl-34051972

ABSTRACT

Exercise intolerance represents a typical feature of heart failure with preserved ejection fraction (HFpEF), and is associated with a poor quality of life, frequent hospitalizations, and increased all-cause mortality. The cardiopulmonary exercise test is the best method to quantify exercise intolerance, and allows detection of the main mechanism responsible for the exercise limitation, influencing treatment and prognosis. Exercise training programs improve exercise tolerance in HFpEF. However, studies are needed to identify appropriate type and duration. This article discusses the pathophysiology of exercise limitation in HFpEF, describes methods of determining exercise tolerance class, and evaluates prognostic implications and potential therapeutic strategies.


Subject(s)
Exercise Therapy/methods , Exercise Tolerance/physiology , Heart Failure/physiopathology , Quality of Life , Stroke Volume/physiology , Exercise Test , Heart Failure/therapy , Humans , Prognosis
8.
Ecol Food Nutr ; 60(4): 491-507, 2021.
Article in English | MEDLINE | ID: mdl-33472422

ABSTRACT

Low- and middle-income countries are usually at high risk of malnutrition. Not only that but the prevalence of malnutrition is much higher. It is important to evaluate the determinants of malnutrition in flood-affected areas of Pakistan. The present study examined the prevalence and risk factors of MUAC-based child malnutrition in flood-hit regions of Khyber Pakhtunkhwa, Pakistan. Multi-stage sampling was employed to select 656 households. Finally, 298 children of 6-59 months were selected. MUAC, an independent anthropometric parameter, was used to investigate the nutritional status of children. An automated logistic regression model was used to identify the risk factors of MUAC-based malnutrition. The prevalence of MUAC-based malnutrition was found 46%, including 40.5% females and 52.1% males. More than 90% of people had improved water quality and soap hand washing facility. Almost 17% of respondents had no toilet facility. Through automated logistic model, child age, maternal age, family size, income level, mother education, water quality, toilet facility were the significant determinants (P < .05) of MUAC-based undernutrition in flood affecting the area. The findings suggest that MUAC-based malnutrition can be minimized in flood-hit areas by targeting the listed risk factors. Community-based awareness programs regarding guidance on nutrition might be a key to reducing malnutrition in the target areas.


Subject(s)
Child Nutrition Disorders , Malnutrition , Arm , Child Nutrition Disorders/epidemiology , Child Nutrition Disorders/etiology , Cross-Sectional Studies , Female , Floods , Humans , Male , Malnutrition/epidemiology , Malnutrition/etiology , Pakistan/epidemiology , Risk Factors
9.
Clin Chem Lab Med ; 58(6): 883-896, 2020 Jun 25.
Article in English | MEDLINE | ID: mdl-32229653

ABSTRACT

Background Matrix-assisted laser desorption ionisation (MALDI) mass spectrometry (MS) has been used for more than 30 years. Compared with other analytical techniques, it offers ease of use, high throughput, robustness, cost-effectiveness, rapid analysis and sensitivity. As advantages, current clinical techniques (e.g. immunoassays) are unable to directly measure the biomarker; rather, they measure secondary signals. MALDI-MS has been extensively researched for clinical applications, and it is set for a breakthrough as a routine tool for clinical diagnostics. Content This review reports on the principles of MALDI-MS and discusses current clinical applications and the future clinical prospects for MALDI-MS. Furthermore, the review assesses the limitations currently experienced in clinical assays, the advantages and the impact of MALDI-MS to transform clinical laboratories. Summary MALDI-MS is widely used in clinical microbiology for the screening of microbial isolates; however, there is scope to apply MALDI-MS in the diagnosis, prognosis, therapeutic drug monitoring and biopsy imaging in many diseases. Outlook There is considerable potential for MALDI-MS in clinic as a tool for screening, profiling and imaging because of its high sensitivity and specificity over alternative techniques.


Subject(s)
Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Biomarkers/analysis , Biopsy , Humans , Limit of Detection
10.
Heart Fail Clin ; 16(1): 23-31, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31735312

ABSTRACT

A novel pathophysiological model of interest is the association between heart failure (HF) and the gastrointestinal system, the 'gut hypothesis'. The choline and carnitine metabolic by-product, Trimethylamine N-oxide (TMAO) is one of the more prominent molecules associated with the link between HF and the gut. Indeed, TMAO levels are increased in HF populations and higher TMAO levels are associated with poor prognosis, whereas low TMAO levels either at baseline/follow up confer better prognosis. Considering that TMAO levels seem not to be affected by guideline-HF treatment, this model could represent a novel and independent therapeutic target for HF.


Subject(s)
Gastrointestinal Microbiome/physiology , Heart Failure/metabolism , Methylamines/blood , Stroke Volume/physiology , Biomarkers/blood , Heart Failure/physiopathology , Humans , Prognosis
11.
J Cell Biochem ; 120(10): 17555-17565, 2019 10.
Article in English | MEDLINE | ID: mdl-31134678

ABSTRACT

Anesthetics could induce cognitive dysfunctions, such as Alzheimer's disease in humans or mice. However, the precise molecular mechanism is unclear. Sevoflurane is a common anesthetic widely used in clinical practice. Here, we demonstrated the induction of cognitive dysfunction induced by Sev in mice to corroborate the signaling pathway and the differentially expressed genes (DEGs) followed by analyzing their functions. The cognitive function of mice was measured by the Morris water maze test. Transcriptomic data were annotated with Illumina HiSeq. 2000. Further, the changes in related proteins or genes were analyzed by western blotting and real-time quantitative polymerase chain reaction. Our results showed that Sev could cause a decline in cognitive competence in mice. The transcriptomic data indicated that adding up to 566 genes were upregulated and 1073 genes were downregulated. The genes of Plin4, Lcn2, Lrg1, Foxf1, and Ctla2a were significantly upregulated, while the genes of Arc, Npas4, Egr2, Hes5, and Cdh9 were downregulated dramatically. The Gene Ontology term with the highest enrichment of DEGs are involved in the regulation of cellular and macromolecule metabolism and cation and nucleic acid binding, respectively. The Kyoto encyclopedia of genes and genomes analysis indicated that the mitogen-activated protein kinases (MAPK) pathway was one of the most important metabolic pathways. In addition, the metabolic pathways related to cognitive function, such as the nervous system and neurodegenerative disease showed significant changes. Furthermore, we found that p38, c-Jun N-terminal kinase, and extracellular signal-regulated kinase of the MAPK signaling pathway played important roles in this process. In conclusion, these results provide the first important clues for identifying the DEGs and signaling pathways in the hippocampus due to a Sev-induced cognitive deficiency in mice.


Subject(s)
Alzheimer Disease/genetics , Cognitive Dysfunction/genetics , Sevoflurane/adverse effects , Transcriptome/genetics , Alzheimer Disease/chemically induced , Alzheimer Disease/pathology , Anesthetics/adverse effects , Animals , Cognitive Dysfunction/chemically induced , Cognitive Dysfunction/pathology , Computational Biology , Disease Models, Animal , Gene Expression Profiling , Gene Ontology , Humans , JNK Mitogen-Activated Protein Kinases/genetics , Metabolic Networks and Pathways/drug effects , Mice
12.
Heart Fail Clin ; 14(1): 93-107, 2018 Jan.
Article in English | MEDLINE | ID: mdl-29153204

ABSTRACT

Heart failure (HF) is associated with significant morbidity and mortality. Biomarkers are used to assist clinicians with timely diagnosis, prognosis, and risk prediction of patients for personalized treatment. Using modern proteomic methods such as mass spectrometry, an increasing number of novel biomarkers have been identified that further aid clinicians in the early diagnosis and outcome prediction of HF. This article focuses on the array of common and novel protein-based biomarkers that provide diagnostic and prognostic information in HF.


Subject(s)
Heart Failure/blood , Proteomics , Biomarkers/blood , Heart Failure/diagnosis , Humans , Prognosis
13.
Environ Monit Assess ; 190(11): 649, 2018 Oct 18.
Article in English | MEDLINE | ID: mdl-30338404

ABSTRACT

From health and environmental point of views, dioxins are important due to their toxicity and persistence. Dioxins have the potential to reside in the environment for longer time if sorbed onto the clay and organic content of the soil matrix. Their transport or leaching under certain environmental conditions such as preferential flow can increase the risk of groundwater contamination. In the current study, breakthrough curves (BTCs) against time were plotted for selected dioxin transport prediction; based on measured distribution coefficient (Kd), dispersion coefficient (D), and retardation factor (R). Three representative soil series named Burhan, Warsak, and Kunda were selected. For dibenzo-p-dioxin (DD), Kd values followed the order as: Burhan> Warsak > Kunda, while for 2-chloro dibenzo-p-dioxin (2 Cl-DD), Kd values followed an order as: Kunda > Burhan > Warsak. Dioxin transport was measured at two different linear velocities (20 and 50 cm day-1). Attainment of equilibrium was verified to be dependent upon the Kd, R, D, and chlorination on dioxin. Kunda series with low OM (0.6%), clay (0.2%), and R (377) was found to have relatively high DD transport potential under normal velocity, due to high dispersion values for its sandy nature. Under the steady or preferential flow conditions, all the plots obtained were identical irrespective of soil type and dioxin nature.


Subject(s)
Dioxins/analysis , Environmental Monitoring , Soil Pollutants/analysis , Soil/chemistry , Adsorption , Aluminum Silicates , Clay , Polychlorinated Dibenzodioxins , Risk Assessment
14.
Beilstein J Org Chem ; 14: 2916-2922, 2018.
Article in English | MEDLINE | ID: mdl-30546475

ABSTRACT

A copper-catalyzed azide-alkyne cycloaddition (CuAAC) reaction for the synthesis of 1,4-disubstituted 1,2,3-triazoles from alkyl diacyl peroxides, azidotrimethylsilane, and terminal alkynes is reported. The alkyl carboxylic acids is for the first time being used as the alkyl azide precursors in the form of alkyl diacyl peroxides. This method avoids the necessity to handle organic azides, as they are generated in situ, making this protocol operationally simple. The Cu(I) catalyst not only participates in the alkyl diacyl peroxides decomposition to afford alkyl azides but also catalyzes the subsequent CuAAC reaction to produce the 1,2,3-triazoles.

15.
Int J Legal Med ; 131(5): 1241-1242, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28210813

ABSTRACT

In the current study, 17 Y-Chromosomal short tandem repeats (Y-STRs) included in theAmpFlSTR Y-Filer amplification kit (Applied Biosystems, Foster City, USA) were investigated in 146 unrelated Yousafzai males residing in the Khyber Pakhtunkhwa Province of Pakistan. A total of 94 (89.52%) unique haplotypes were observed. Discrimination capacity was 71.92%. Haplotype diversity ranged from 0.354 (DYS456) to 0.663 (DYS458). Both Rst pairwise analysis and multidimensional scaling plot showed that the genetic structure of the Yousafzais is significantly different from neighbouring populations.


Subject(s)
Chromosomes, Human, Y , Ethnicity/genetics , Genetics, Population , Microsatellite Repeats , DNA Fingerprinting , Gene Frequency , Haplotypes , Humans , Male , Pakistan , Polymerase Chain Reaction
19.
Pak J Pharm Sci ; 29(3): 811-7, 2016 May.
Article in English | MEDLINE | ID: mdl-27166526

ABSTRACT

Pyrazine carbohydrazide based hydrazones were synthesized starting from 5-methylpyrazine-2-carboxylic acid. The acid was first converted to its methyl ester, which on further treatment with hydrazine hydrate transformed to carbohydrazide. The carbohydrazide was treated with differently substituted aromatic carbonyl compounds giving hydrazones. Characterization of the synthesized compounds was carried out using modern spectroscopic techniques and unambiguously confirmed through X-ray crystallographic studies of compound 3d. The purity of the compounds was verified using elemental analysis. The target molecules were evaluated for urease inhibition, antioxidant and antimicrobial activity.


Subject(s)
Drug Design , Hydrazines/chemical synthesis , Hydrazines/pharmacology , Hydrazones/chemical synthesis , Hydrazones/pharmacology , Pyrazines/chemical synthesis , Pyrazines/pharmacology , Anti-Infective Agents/chemical synthesis , Anti-Infective Agents/pharmacology , Antioxidants/chemical synthesis , Antioxidants/pharmacology , Carbon-13 Magnetic Resonance Spectroscopy , Crystallography, X-Ray , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/pharmacology , Mass Spectrometry , Models, Molecular , Molecular Structure , Proton Magnetic Resonance Spectroscopy , Spectrophotometry, Infrared , Structure-Activity Relationship , Urease/antagonists & inhibitors , Urease/metabolism
20.
Int J Legal Med ; 128(4): 595-8, 2014 Jul.
Article in English | MEDLINE | ID: mdl-24789265

ABSTRACT

Short tandem repeat (STR) markers are extensively used for human identification as well as paternity and forensic casework. X-chromosome STR (X-STR) markers are a powerful complementary system especially in deficiency paternity testing. This study presents the development and characterization of a new X-chromosomal short tandem repeat (STR) multiplex using short amplicon (<200 bp). A total of 366 samples from Punjabi population and 346 samples from Sindhi population were typed for 11 X-chromosomal STR markers: DXS101, DXS6789, DXS6793, DXS7132, DXS7423, DXS7424, DXS8378, DXS9902, GATA31E08, GATA172D05, and HPRTB along with sex-typing locus, amelogenin. Each marker showed a high degree of polymorphism, and the multiplex was sensitive down to 250 pg of human DNA. A total of 78 alleles were found with 5-11 alleles for each marker. The population data can be used as reference database for Sindhi and Punjabi populations.


Subject(s)
Chromosomes, Human, X , DNA Fingerprinting/methods , Microsatellite Repeats , DNA Degradation, Necrotic , DNA Primers , Ethnicity/genetics , Female , Gene Frequency , Genetic Markers , Humans , Male , Multiplex Polymerase Chain Reaction , Pakistan
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