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1.
Lineage tracing reveals the phylodynamics, plasticity, and paths of tumor evolution.
Cell
; 185(11): 1905-1923.e25, 2022 05 26.
Article
in English
| MEDLINE | ID: mdl-35523183
2.
Deciphering cell states and genealogies of human haematopoiesis.
Nature
; 627(8003): 389-398, 2024 Mar.
Article
in English
| MEDLINE | ID: mdl-38253266
3.
Molecular recording of mammalian embryogenesis.
Nature
; 570(7759): 77-82, 2019 06.
Article
in English
| MEDLINE | ID: mdl-31086336
4.
CoRAL accurately resolves extrachromosomal DNA genome structures with long-read sequencing.
bioRxiv
; 2024 May 18.
Article
in English
| MEDLINE | ID: mdl-38405779
5.
PERCEPTION predicts patient response and resistance to treatment using single-cell transcriptomics of their tumors.
Nat Cancer
; 2024 Apr 18.
Article
in English
| MEDLINE | ID: mdl-38637658
6.
Disparate pathways for extrachromosomal DNA biogenesis and genomic DNA repair.
bioRxiv
; 2023 Oct 23.
Article
in English
| MEDLINE | ID: mdl-37961138
7.
Coordinated inheritance of extrachromosomal DNA species in human cancer cells.
bioRxiv
; 2023 Jul 19.
Article
in English
| MEDLINE | ID: mdl-37503111
8.
Interactive, integrated analysis of single-cell transcriptomic and phylogenetic data with PhyloVision.
Cell Rep Methods
; 2(4): 100200, 2022 04 25.
Article
in English
| MEDLINE | ID: mdl-35497495
9.
Single-cell lineages reveal the rates, routes, and drivers of metastasis in cancer xenografts.
Science
; 371(6532)2021 02 26.
Article
in English
| MEDLINE | ID: mdl-33479121
10.
Benchmarked approaches for reconstruction of in vitro cell lineages and in silico models of C. elegans and M. musculus developmental trees.
Cell Syst
; 12(8): 810-826.e4, 2021 08 18.
Article
in English
| MEDLINE | ID: mdl-34146472
11.
Inference of single-cell phylogenies from lineage tracing data using Cassiopeia.
Genome Biol
; 21(1): 92, 2020 04 14.
Article
in English
| MEDLINE | ID: mdl-32290857
12.
Robust Sequence Determinants of α-Synuclein Toxicity in Yeast Implicate Membrane Binding.
ACS Chem Biol
; 15(8): 2137-2153, 2020 08 21.
Article
in English
| MEDLINE | ID: mdl-32786289
13.
Functional interpretation of single cell similarity maps.
Nat Commun
; 10(1): 4376, 2019 09 26.
Article
in English
| MEDLINE | ID: mdl-31558714
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