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1.

Recommendations on data sharing in HIV drug resistance research.

Inzaule, Seth C; Siedner, Mark J; Little, Susan J; Avila-Rios, Santiago; Ayitewala, Alisen; Bosch, Ronald J; Calvez, Vincent; Ceccherini-Silberstein, Francesca; Charpentier, Charlotte; Descamps, Diane; Eshleman, Susan H; Fokam, Joseph; Frenkel, Lisa M; Gupta, Ravindra K; Ioannidis, John P A; Kaleebu, Pontiano; Kantor, Rami; Kassaye, Seble G; Kosakovsky Pond, Sergei L; Kouamou, Vinie; Kouyos, Roger D; Kuritzkes, Daniel R; Lessells, Richard; Marcelin, Anne-Genevieve; Mbuagbaw, Lawrence; Minalga, Brian; Ndembi, Nicaise; Neher, Richard A; Paredes, Roger; Pillay, Deenan; Raizes, Elliot G; Rhee, Soo-Yon; Richman, Douglas D; Ruxrungtham, Kiat; Sabeti, Pardis C; Schapiro, Jonathan M; Sirivichayakul, Sunee; Steegen, Kim; Sugiura, Wataru; van Zyl, Gert U; Vandamme, Anne-Mieke; Wensing, Annemarie M J; Wertheim, Joel O; Gunthard, Huldrych F; Jordan, Michael R; Shafer, Robert W.

PLoS Med ; 20(9): e1004293, 2023 Sep.

Article in English | MEDLINE | ID: mdl-37738247

2.

Clinical Impact of Pretreatment Human Immunodeficiency Virus Drug Resistance in People Initiating Nonnucleoside Reverse Transcriptase Inhibitor-Containing Antiretroviral Therapy: A Systematic Review and Meta-analysis.

Bertagnolio, Silvia; Hermans, Lucas; Jordan, Michael R; Avila-Rios, Santiago; Iwuji, Collins; Derache, Anne; Delaporte, Eric; Wensing, Annemarie; Aves, Theresa; Borhan, A S M; Leenus, Alvin; Parkin, Neil; Doherty, Meg; Inzaule, Seth; Mbuagbaw, Lawrence.

J Infect Dis ; 224(3): 377-388, 2021 08 02.

Article in English | MEDLINE | ID: mdl-33202025

3.

Low-Abundance Drug-Resistant HIV-1 Variants in Antiretroviral Drug-Naive Individuals: A Systematic Review of Detection Methods, Prevalence, and Clinical Impact.

Mbunkah, Herbert A; Bertagnolio, Silvia; Hamers, Raph L; Hunt, Gillian; Inzaule, Seth; Rinke De Wit, Tobias F; Paredes, Roger; Parkin, Neil T; Jordan, Michael R; Metzner, Karin J.

J Infect Dis ; 221(10): 1584-1597, 2020 04 27.

Article in English | MEDLINE | ID: mdl-31809534

4.

Integrase strand transfer inhibitor (INSTI)-resistance mutations for the surveillance of transmitted HIV-1 drug resistance.

Tzou, Philip L; Rhee, Soo-Yon; Descamps, Diane; Clutter, Dana S; Hare, Bradley; Mor, Orna; Grude, Maxime; Parkin, Neil; Jordan, Michael R; Bertagnolio, Silvia; Schapiro, Jonathan M; Harrigan, P Richard; Geretti, Anna Maria; Marcelin, Anne-Geneviève; Shafer, Robert W.

J Antimicrob Chemother ; 75(1): 170-182, 2020 01 01.

Article in English | MEDLINE | ID: mdl-31617907

5.

Content guidance for mobile phones short message service (SMS)-based antiretroviral therapy adherence and appointment reminders: a review of the literature.

Kerrigan, Andrew; Kaonga, Nadi N; Tang, Alice M; Jordan, Michael R; Hong, Steven Y.

AIDS Care ; 31(5): 636-646, 2019 05.

Article in English | MEDLINE | ID: mdl-30497271

6.

Correction to: Prevalence of HIV-1 transmitted drug resistance in recently infected, treatment-naïve persons in the Southwest of Iran, 2014-2015.

Ghafari, Shokouh; Memarnejadian, Arash; Samarbaf-Zadeh, Alireza; Mostafavi, Ehsan; Makvandi, Manoochehr; Salmanzadeh, Shokrolah; Ghadiri, Ata; Jordan, Michael R; Mousavi, Elham; Jahanbakhsh, Fatemeh; Azadmanesh, Kayhan.

Arch Virol ; 163(1): 297, 2018 01.

Article in English | MEDLINE | ID: mdl-29199382

7.

The World Health Organization's Response to Emerging Human Immunodeficiency Virus Drug Resistance and a Call for Global Action.

Bertagnolio, Silvia; Beanland, Rachel L; Jordan, Michael R; Doherty, Meg; Hirnschall, Gottfried.

J Infect Dis ; 216(suppl_9): S801-S804, 2017 12 01.

Article in English | MEDLINE | ID: mdl-29040686

8.

Impact of HIV Drug Resistance on HIV/AIDS-Associated Mortality, New Infections, and Antiretroviral Therapy Program Costs in Sub-Saharan Africa.

Phillips, Andrew N; Stover, John; Cambiano, Valentina; Nakagawa, Fumiyo; Jordan, Michael R; Pillay, Deenan; Doherty, Meg; Revill, Paul; Bertagnolio, Silvia.

J Infect Dis ; 215(9): 1362-1365, 2017 05 01.

Article in English | MEDLINE | ID: mdl-28329236

9.

Human Immunodeficiency Virus (HIV) Drug Resistance in African Infants and Young Children Newly Diagnosed With HIV: A Multicountry Analysis.

Jordan, Michael R; Penazzato, Martina; Cournil, Amandine; Vubil, Adolfo; Jani, Ilesh; Hunt, Gillian; Carmona, Sergio; Maphalala, Gugu; Mthethwa, Nobuhle; Watera, Christine; Kaleebu, Pontiano; Musanhu, Christine Chakanyuka; Mtapuri-Zinyowera, Sekesai; Dzangare, Janet; Peeters, Martine; Yang, Chunfu; Parkin, Neil; Bertagnolio, Silvia.

Clin Infect Dis ; 65(12): 2018-2025, 2017 Nov 29.

Article in English | MEDLINE | ID: mdl-29020335

10.

Prevalence of HIV-1 transmitted drug resistance in recently infected, treatment-naïve persons in the Southwest of Iran, 2014-2015.

Ghafari, Shokouh; Memarnejadian, Arash; Samarbaf-Zadeh, Alireza; Mostafavi, Ehsan; Makvandi, Manoochehr; Salmanzadeh, Shokrolah; Ghadiri, Ata; Jordan, Michael R; Mousavi, Elham; Jahanbakhsh, Fatemeh; Azadmanesh, Kayhan.

Arch Virol ; 162(9): 2737-2745, 2017 Sep.

Article in English | MEDLINE | ID: mdl-28589513

11.

HIV Drug Resistance.

Bertagnolio, Silvia; Jordan, Michael R; Doherty, Meg.

N Engl J Med ; 378(9): 874, 2018 03 01.

Article in English | MEDLINE | ID: mdl-29504388

12.

Long-term Virological Outcomes of First-Line Antiretroviral Therapy for HIV-1 in Low- and Middle-Income Countries: A Systematic Review and Meta-analysis.

Boender, T Sonia; Sigaloff, Kim C E; McMahon, James H; Kiertiburanakul, Sasisopin; Jordan, Michael R; Barcarolo, Jhoney; Ford, Nathan; Rinke de Wit, Tobias F; Bertagnolio, Silvia.

Clin Infect Dis ; 61(9): 1453-61, 2015 Nov 01.

Article in English | MEDLINE | ID: mdl-26157050

13.

Geographic and temporal trends in the molecular epidemiology and genetic mechanisms of transmitted HIV-1 drug resistance: an individual-patient- and sequence-level meta-analysis.

Rhee, Soo-Yon; Blanco, Jose Luis; Jordan, Michael R; Taylor, Jonathan; Lemey, Philippe; Varghese, Vici; Hamers, Raph L; Bertagnolio, Silvia; Rinke de Wit, Tobias F; Aghokeng, Avelin F; Albert, Jan; Avi, Radko; Avila-Rios, Santiago; Bessong, Pascal O; Brooks, James I; Boucher, Charles A B; Brumme, Zabrina L; Busch, Michael P; Bussmann, Hermann; Chaix, Marie-Laure; Chin, Bum Sik; D'Aquin, Toni T; De Gascun, Cillian F; Derache, Anne; Descamps, Diane; Deshpande, Alaka K; Djoko, Cyrille F; Eshleman, Susan H; Fleury, Herve; Frange, Pierre; Fujisaki, Seiichiro; Harrigan, P Richard; Hattori, Junko; Holguin, Africa; Hunt, Gillian M; Ichimura, Hiroshi; Kaleebu, Pontiano; Katzenstein, David; Kiertiburanakul, Sasisopin; Kim, Jerome H; Kim, Sung Soon; Li, Yanpeng; Lutsar, Irja; Morris, Lynn; Ndembi, Nicaise; Ng, Kee Peng; Paranjape, Ramesh S; Peeters, Martine; Poljak, Mario; Price, Matt A.

PLoS Med ; 12(4): e1001810, 2015 Apr.

Article in English | MEDLINE | ID: mdl-25849352

14.

Targets for intervention to improve virological outcomes for patients receiving free antiretroviral therapy in Tamil Nadu, India.

McMahon, James H; Manoharan, Anand; Wanke, Christine; Mammen, Shoba; Jose, Hepsibah; Malini, Thabeetha; Kadavanu, Tony; Jordan, Michael R; Elliott, Julian H; Lewin, Sharon R; Mathai, Dilip.

AIDS Care ; 26(5): 559-66, 2014.

Article in English | MEDLINE | ID: mdl-24125035

15.

Transmission of drug resistant HIV and its potential impact on mortality and treatment outcomes in resource-limited settings.

Cambiano, Valentina; Bertagnolio, Silvia; Jordan, Michael R; Lundgren, Jens D; Phillips, Andrew.

J Infect Dis ; 207 Suppl 2: S57-62, 2013 Jun 15.

Article in English | MEDLINE | ID: mdl-23687290

16.

Nucleoside reverse transcriptase inhibitor resistance mutations associated with first-line stavudine-containing antiretroviral therapy: programmatic implications for countries phasing out stavudine.

Tang, Michele W; Rhee, Soo-Yon; Bertagnolio, Silvia; Ford, Nathan; Holmes, Susan; Sigaloff, Kim C; Hamers, Raph L; de Wit, Tobias F Rinke; Fleury, Herve J; Kanki, Phyllis J; Ruxrungtham, Kiat; Hawkins, Claudia A; Wallis, Carole L; Stevens, Wendy; van Zyl, Gert U; Manosuthi, Weerawat; Hosseinipour, Mina C; Ngo-Giang-Huong, Nicole; Belec, Laurent; Peeters, Martine; Aghokeng, Avelin; Bunupuradah, Torsak; Burda, Sherri; Cane, Patricia; Cappelli, Giulia; Charpentier, Charlotte; Dagnra, Anoumou Y; Deshpande, Alaka K; El-Katib, Ziad; Eshleman, Susan H; Fokam, Joseph; Gody, Jean-Chrysostome; Katzenstein, David; Koyalta, Donato D; Kumwenda, Johnstone J; Lallemant, Marc; Lynen, Lutgarde; Marconi, Vincent C; Margot, Nicolas A; Moussa, Sandrine; Ndung'u, Thumbi; Nyambi, Phillipe N; Orrell, Catherine; Schapiro, Jonathan M; Schuurman, Rob; Sirivichayakul, Sunee; Smith, Davey; Zolfo, Maria; Jordan, Michael R; Shafer, Robert W.

J Infect Dis ; 207 Suppl 2: S70-7, 2013 Jun 15.

Article in English | MEDLINE | ID: mdl-23687292

17.

Prevalence of Emergent Dolutegravir Resistance Mutations in People Living with HIV: A Rapid Scoping Review.

Chu, Carolyn; Tao, Kaiming; Kouamou, Vinie; Avalos, Ava; Scott, Jake; Grant, Philip M; Rhee, Soo-Yon; McCluskey, Suzanne M; Jordan, Michael R; Morgan, Rebecca L; Shafer, Robert W.

Viruses ; 16(3)2024 03 04.

Article in English | MEDLINE | ID: mdl-38543764

18.

Global trends in antiretroviral resistance in treatment-naive individuals with HIV after rollout of antiretroviral treatment in resource-limited settings: a global collaborative study and meta-regression analysis.

Gupta, Ravindra K; Jordan, Michael R; Sultan, Binta J; Hill, Andrew; Davis, Daniel H J; Gregson, John; Sawyer, Anthony W; Hamers, Raph L; Ndembi, Nicaise; Pillay, Deenan; Bertagnolio, Silvia.

Lancet ; 380(9849): 1250-8, 2012 Oct 06.

Article in English | MEDLINE | ID: mdl-22828485

19.

Viral suppression after 12 months of antiretroviral therapy in low- and middle-income countries: a systematic review.

McMahon, James H; Elliott, Julian H; Bertagnolio, Silvia; Kubiak, Rachel; Jordan, Michael R.

Bull World Health Organ ; 91(5): 377-385E, 2013 May 01.

Article in English | MEDLINE | ID: mdl-23678201

20.

Pharmacy and self-report adherence measures to predict virological outcomes for patients on free antiretroviral therapy in Tamil Nadu, India.

McMahon, James H; Manoharan, Anand; Wanke, Christine A; Mammen, Shoba; Jose, Hepsibah; Malini, Thabeetha; Kadavanu, Tony; Jordan, Michael R; Elliott, Julian H; Lewin, Sharon R; Mathai, Dilip.

AIDS Behav ; 17(6): 2253-9, 2013 Jul.

Article in English | MEDLINE | ID: mdl-23435750

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