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1.
J Hepatol ; 74(5): 1064-1074, 2021 05.
Article in English | MEDLINE | ID: mdl-33278456

ABSTRACT

BACKGROUND & AIMS: Factors associated with a successful outcome upon nucleos(t)ide analogue (NA) treatment withdrawal in HBeAg-negative chronic hepatitis B (CHB) patients have yet to be clarified. The objective of this study was to analyse the HBV-specific T cell response, in parallel with peripheral and intrahepatic viral parameters, in patients undergoing NA discontinuation. METHODS: Twenty-seven patients without cirrhosis with HBeAg-negative CHB with complete viral suppression (>3 years) were studied prospectively. Intrahepatic HBV-DNA (iHBV-DNA), intrahepatic HBV-RNA (iHBV-RNA), and covalently closed circular DNA (cccDNA) were quantified at baseline. Additionally, serum markers (HBV-DNA, HBsAg, HBV core-related antigen [HBcrAg] and HBV-RNA) and HBV-specific T cell responses were analysed at baseline and longitudinally throughout follow-up. RESULTS: After a median follow-up of 34 months, 22/27 patients (82%) remained off-therapy, of whom 8 patients (30% of the total cohort) lost HBsAg. Baseline HBsAg significantly correlated with iHBV-DNA and iHBV-RNA, and these parameters were lower in patients who lost HBsAg. All patients had similar levels of detectable cccDNA regardless of their clinical outcome. Patients achieving functional cure had baseline HBsAg levels ≤1,000 IU/ml. Similarly, an increased frequency of functional HBV-specific CD8+ T cells at baseline was associated with sustained viral control off treatment. These HBV-specific T cell responses persisted, but did not increase, after treatment withdrawal. A similar, but not statistically significant trend, was observed for HBV-specific CD4+ T cell responses. CONCLUSIONS: Decreased cccDNA transcription and low HBsAg levels are associated with HBsAg loss upon NA discontinuation in patients with HBeAg-negative CHB. The presence of functional HBV-specific T cells at baseline are associated with a successful outcome after treatment withdrawal. LAY SUMMARY: Nucleos(t)ide analogue therapy can be discontinued in a high proportion of chronic hepatitis B patients without cirrhosis. The strength of HBV-specific immune T cell responses may contribute to successful viral control after antiviral treatment interruption. Our comprehensive study provides in-depth data on virological and immunological factors than can help guide individualised therapy in patients with chronic hepatitis B.


Subject(s)
DNA, Viral/isolation & purification , Hepatitis B Antigens , Hepatitis B virus , Hepatitis B, Chronic , Immunity, Cellular , Liver , Nucleosides/therapeutic use , Withholding Treatment/statistics & numerical data , Antiviral Agents/therapeutic use , Biomarkers/blood , DNA, Circular/isolation & purification , Female , Hepatitis B Antigens/analysis , Hepatitis B Antigens/isolation & purification , Hepatitis B Surface Antigens/analysis , Hepatitis B virus/genetics , Hepatitis B virus/isolation & purification , Hepatitis B, Chronic/blood , Hepatitis B, Chronic/diagnosis , Humans , Immunity, Cellular/drug effects , Immunity, Cellular/immunology , Liver/pathology , Liver/virology , Male , Middle Aged , Patient Care Planning
2.
J Viral Hepat ; 27(12): 1408-1418, 2020 12.
Article in English | MEDLINE | ID: mdl-32812325

ABSTRACT

Chronic hepatitis C virus (HCV) infection impairs HCV CD8+ T-cell responses, while it could influence immune responses towards unrelated viruses/vaccines (e.g. cytomegalovirus, CMV, and influenza, Flu). The aim of our study was to delineate whether restoration of these virus-specific CD8+ T cells occurs after direct-acting antiviral (DAA) therapies and particularly in patients with cirrhosis. We performed longitudinal analysis (baseline, week 4, follow-up [FU] 12 and FU48) of virus-specific CD8+ T cells by multicolour flow cytometry in HCV-cirrhotic patients undergoing DAA therapy (n = 26) after in vitro expansion with immunodominant HCV, CMV and Flu epitopes restricted by HLA-A*02. HCV noncirrhotic patients (n = 9) and healthy individuals (n = 10) served as controls. We found that the proliferative capacity of HCV-specific CD8+ T cells increased from baseline up to FU48 in a significant proportion of cirrhotic and noncirrhotic patients. Nevertheless, these cells remained poor cytokine producers in both patient groups, regardless of the down-regulation of inhibitory co-regulatory receptors in HCV-cirrhotic patients at FU48. Likewise, high expression levels of these exhaustion markers were detected in CMV-/Flu-specific CD8+ T cells in HCV-cirrhotic patients at all time points, albeit without affecting their proliferative capacity or cytokine production. We conclude that DAA therapies induce restoration of the proliferative capacity of HCV-specific CD8+ T cells. However, these cells remain phenotypically and functionally impaired. Contrarily, the 'exhausted' phenotype in CMV-/Flu-specific CD8+ T cells in HCV-cirrhotic patients did not associate with their functions. Larger studier with longer follow-up may elucidate whether this complex interplay influences the outcome of cirrhotic patients.


Subject(s)
Hepatitis C, Chronic , Hepatitis C , Antiviral Agents/therapeutic use , CD8-Positive T-Lymphocytes , Genotype , Hepacivirus , Hepatitis C/drug therapy , Hepatitis C, Chronic/complications , Hepatitis C, Chronic/drug therapy , Humans , Liver Cirrhosis/drug therapy
3.
J Med Virol ; 92(8): 1359-1362, 2020 08.
Article in English | MEDLINE | ID: mdl-31743439

ABSTRACT

Hepatitis E virus (HEV) and hepatitis A virus (HAV) are both secreted in feces. Despite HEV transmission in Europe is mainly zoonotic, person-to-person transmission has not been completely excluded. Men who have sex with men (MSM) constitute a high-risk group for HAV mostly due to oral sex. We investigated the potential transmission of HEV during an acute hepatitis A (AHA) outbreak mainly affecting MSM. One hundred and two patients were diagnosed with AHA. Sixty-nine (68%) self-reported to be MSM, 75% of whom had high-risk sexual behaviors and 46% had suffered previous sexually transmitted diseases. We collected serum from 85 (83%) patients during AHA. HEV-IgG seroprevalence was not different among MSM (7%) compared with non-MSM (8%) patients. Two patients had positive anti-HEV-IgM, but all samples tested negative for HEV-RNA. These results suggest that HEV does not spread by sexual contact or person-to-person in our area.


Subject(s)
Disease Outbreaks , Hepatitis A/epidemiology , Hepatitis Antibodies/blood , Hepatitis E/epidemiology , Hepatitis E/immunology , Adult , Hepatitis E virus , Humans , Incidence , Male , Middle Aged , Prospective Studies , Risk Factors , Seroepidemiologic Studies , Sexual and Gender Minorities , Spain/epidemiology , Surveys and Questionnaires
4.
J Gen Virol ; 100(1): 63-68, 2019 01.
Article in English | MEDLINE | ID: mdl-30451649

ABSTRACT

Cholestatic hepatitis C (CHC) is a severe form of hepatitis C virus (HCV) infection recurrence that leads to high graft loss rates early after liver transplantation (LT). To investigate the pathogenic mechanisms of CHC, we analysed HCV quasispecies in CHC patients compared to a control group (mild hepatitis C recurrence) by deep pyrosequencing. At the time of LT, NS5B quasispecies complexity was similar between the two groups but, after LT, it decreased more sharply in CHC patients than in the control group. Interestingly, the major variant before LT propagated efficiently and remained as the dominant sequence after LT in 62 % of CHC patients versus 11 % of controls (P=0.031). Sequence analysis of the complete non-structural region in a limited number of patients revealed a potential 12 aa signature specific to the CHC group. These data suggest that intrinsic molecular determinants in the circulating HCV quasispecies may provide a fitness advantage, contributing to the development of CHC.


Subject(s)
Hepacivirus/isolation & purification , Hepatitis C, Chronic/pathology , Hepatitis C, Chronic/virology , Jaundice, Obstructive/etiology , Jaundice, Obstructive/virology , Liver Transplantation , Aged , Female , Genotype , Hepacivirus/classification , Hepacivirus/genetics , High-Throughput Nucleotide Sequencing , Humans , Male , Middle Aged , Viral Nonstructural Proteins/genetics
5.
J Viral Hepat ; 25(12): 1515-1525, 2018 12.
Article in English | MEDLINE | ID: mdl-30141252

ABSTRACT

The emergence of resistance-associated substitutions (RASs) can compromise the high efficacy of direct-acting antivirals (DAAs). Little is known about RASs selection at very early time points during DAA treatment. Therefore, we analyzed the potential emergence of RASs immediately after therapy initiation. Samples of 71 patients treated with different DAAs were collected at baseline, during therapy (hours 4 and 8; days 1-7; weeks 2-4) or until target not detected. HCV-RNA levels were determined by qPCR, and RASs were detected by deep sequencing. Sixty-three (89%) patients achieved a sustained virological response (SVR), 7 (10%) relapsed, and 1 (1%) experienced a breakthrough. Almost all non-SVR (7/8, 88%) showed RASs either at baseline or relapse. High-frequency RASs detected at baseline (Y93H and L159F+C316N) remained detectable at early time points during therapy and reappeared as most prevalent substitutions at relapse. Conversely, emergent RASs at relapse (Q80R, D168E/V, R155K and L31V) were not observed during the first hours-days, before HCV-RNA became undetectable. HCV-RNA decay and genetic evolution of the quasispecies followed a similar pattern during the first hours of therapy in SVR and non-SVR patients. In conclusion, the absence of early RASs selection and the similar dynamics of HCV kinetics and quasispecies in SVR and non-SVR patients after therapy initiation suggest that RASs selection may occur at later stages in the remaining reservoir, where viral populations persist hidden at very low replication levels. Nevertheless, we cannot completely exclude very early selection, when RASs are present below the sensitivity limit of deep sequencing.


Subject(s)
Amino Acid Substitution , Antiviral Agents/administration & dosage , Drug Resistance, Viral , Hepacivirus/drug effects , Hepacivirus/isolation & purification , Hepatitis C, Chronic/drug therapy , Viral Load , Adult , Aged , Aged, 80 and over , Antiviral Agents/pharmacology , Female , Hepacivirus/genetics , Hepatitis C, Chronic/virology , Humans , Male , Middle Aged , Prospective Studies , RNA, Viral/blood , RNA, Viral/genetics , Real-Time Polymerase Chain Reaction , Recurrence , Selection, Genetic , Sustained Virologic Response
6.
Liver Int ; 38(4): 588-593, 2018 04.
Article in English | MEDLINE | ID: mdl-28980376

ABSTRACT

BACKGROUND & AIMS: Acute hepatitis A is transmitted mainly via the faecal-oral route and/or contaminated aliment. Furthermore, several outbreaks in the men who have sex with men (MSM) population classified hepatitis A as a sexually transmitted disease (STD). We aimed to clarify an ongoing hepatitis A outbreak in Barcelona with respect to patients' characteristics and viral phylogenetic analysis. METHODS: We prospectively analyzed 46 cases of hepatitis A infection that were registered in our hospital between January and June 2017. We evaluated demographics data, risk factors, presenting symptoms, sexual orientation, comorbidities and further STD infections. The phylogenetic correlation of the current circulating viruses among them and other hepatitis A strains was assessed by sequencing of the VP1/P2A region. RESULTS: Most patients were male (44, 96%) with median age 33.5 years (range 28-50). Thirty-one (67%) were MSM and 18 (39%) required hospitalization. Molecular phylogenetic analyses revealed that all patients were infected by hepatitis A subgenotype IA strains. Moreover, current strains comprised 3 distinct clusters, previously reported in ongoing outbreaks in the United Kingdom, Berlin and the Netherlands. However, these strains were phylogenetically diverse to those previously reported in Barcelona metropolitan region. CONCLUSIONS: Ongoing hepatitis A outbreak in Barcelona affects primarily the MSM community and is phylogenetically linked to current hepatitis A outbreaks described in other European countries. As a result of the high admission rate, these outbreaks may impact the admission pattern of referral liver units. Control measures, for example vaccinations programs tailored to the MSM community, must be taken to control further spreading.


Subject(s)
Disease Outbreaks/statistics & numerical data , Hepatitis A/epidemiology , Homosexuality, Male , Acute Disease , Adult , Female , Hepatitis A Virus, Human/genetics , Hepatitis A Virus, Human/isolation & purification , Hospitalization/statistics & numerical data , Humans , Male , Middle Aged , Phylogeny , Risk Factors , Spain/epidemiology
7.
Article in English | MEDLINE | ID: mdl-28193659

ABSTRACT

A hepatitis C virus (HCV) epidemic affecting HIV-infected men who have sex with men (MSM) is expanding worldwide. In spite of the improved cure rates obtained with the new direct-acting antiviral drug (DAA) combinations, the high rate of reinfection within this population calls urgently for novel preventive interventions. In this study, we determined in cell culture and ex vivo experiments with human colorectal tissue that lipoquads, G-quadruplex DNA structures fused to cholesterol, are efficient HCV pangenotypic entry and cell-to-cell transmission inhibitors. Thus, lipoquads may be promising candidates for the development of rectally applied gels to prevent HCV transmission.


Subject(s)
Antiviral Agents/therapeutic use , Cholesterol/therapeutic use , Hepacivirus/drug effects , Hepatitis C/drug therapy , Hepatitis C/transmission , Oligonucleotides/therapeutic use , Virus Internalization/drug effects , Cell Line, Tumor , Cholesterol/chemistry , G-Quadruplexes , HEK293 Cells , HIV Infections , Hepacivirus/growth & development , Homosexuality, Male , Humans , Male , Oligonucleotides/chemistry
8.
Gastroenterology ; 151(4): 633-636.e3, 2016 10.
Article in English | MEDLINE | ID: mdl-27373513

ABSTRACT

We assessed the presence of hepatitis C virus (HCV) RNA in liver explants from 39 patients awaiting liver transplantation who were treated with an interferon-free regimen and had undetectable serum HCV RNA at the time of liver transplantation. Interestingly, HCV RNA was detected in most liver explants (67%). Patients with HCV RNA-positive explants had received shorter courses of treatment, and HCV RNA was undetectable in serum for shorter periods before transplantation compared to patients with HCV RNA-negative explants (P = .014 and P = .013, respectively). Levels of HCV RNA in explants were significantly higher in patients with a relapse of HCV infection than patients who responded to treatment (P = .016), but most patients (85%) with residual HCV-RNA in the explant achieved a sustained virologic response after receiving their liver transplant.


Subject(s)
Antiviral Agents/administration & dosage , Hepacivirus/drug effects , Hepatitis C/virology , Liver Transplantation , Liver/virology , RNA, Viral/drug effects , Transplants/virology , Female , Hepacivirus/genetics , Hepatitis C/drug therapy , Humans , Male , Middle Aged , RNA, Viral/analysis , RNA, Viral/blood , Recurrence , Sustained Virologic Response , Waiting Lists
9.
J Virol ; 90(4): 1918-30, 2016 02 15.
Article in English | MEDLINE | ID: mdl-26656684

ABSTRACT

UNLABELLED: Hepatitis C virus (HCV) infection is the leading cause of chronic liver diseases. Water extracts of the leaves of the wild Egyptian artichoke (WEA) [Cynara cardunculus L. var. sylvestris (Lam.) Fiori] have been used for centuries in the Sinai Peninsula to treat hepatitis symptoms. Here we isolated and characterized six compounds from the water extracts of WEA and evaluated their HCV inhibition capacities in vitro. Importantly, two of these compounds, grosheimol and cynaropicrin, inhibited HCV with half-maximal effective concentrations (EC50s) in the low micromolar range. They inhibited HCV entry into target cells and were active against both cell-free infection as well as cell-cell transmission. Furthermore, the antiviral activity of both compounds was pan-genotypic as HCV genotypes 1a, 1b, 2b, 3a, 4a, 5a, 6a, and 7a were inhibited. Thus, grosheimol and cynaropicrin are promising candidates for the development of new pan-genotypic entry inhibitors of HCV infection. IMPORTANCE: Because there is no preventive HCV vaccine available today, the discovery of novel anti-HCV cell entry inhibitors could help develop preventive measures against infection. The present study describes two compounds isolated from the wild Egyptian artichoke (WEA) with respect to their structural elucidation, absolute configuration, and quantitative determination. Importantly, both compounds inhibited HCV infection in vitro. The first compound was an unknown molecule, and it was designated "grosheimol," while the second compound is the known molecule cynaropicrin. Both compounds belong to the group of sesquiterpene lactones. The mode of action of these compounds occurred during the early steps of the HCV life cycle, including cell-free and cell-cell infection inhibition. These natural compounds present promising candidates for further development into anti-HCV therapeutics.


Subject(s)
Antiviral Agents/pharmacology , Biological Products/pharmacology , Cynara/chemistry , Hepacivirus/drug effects , Plant Extracts/pharmacology , Antiviral Agents/isolation & purification , Biological Products/isolation & purification , Hepacivirus/physiology , Lactones/isolation & purification , Lactones/pharmacology , Plant Extracts/isolation & purification , Plant Leaves/chemistry , Sesquiterpenes/isolation & purification , Sesquiterpenes/pharmacology , Virus Internalization/drug effects
10.
J Virol ; 89(19): 9962-73, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26202245

ABSTRACT

UNLABELLED: Hepatitis C virus (HCV) infects hepatocytes through two different routes: (i) cell-free particle diffusion followed by engagement with specific cellular receptors and (ii) cell-to-cell direct transmission mediated by mechanisms not well defined yet. HCV exits host cells in association with very-low-density lipoprotein (VLDL) components. VLDL particles contain apolipoproteins B (ApoB) and E (ApoE), which are required for viral assembly and/or infectivity. Based on these precedents, we decided to study whether these VLDL components participate in HCV cell-to-cell transmission in vitro. We observed that cell-to-cell viral spread was compromised after ApoE interference in donor but not in acceptor cells. In contrast, ApoB knockdown in either donor or acceptor cells did not impair cell-to-cell viral transmission. Interestingly, ApoB participated in the assembly of cell-free infective virions, suggesting a differential regulation of cell-to-cell and cell-free HCV infection. This study identifies host-specific factors involved in these distinct routes of infection that may unveil new therapeutic targets and advance our understanding of HCV pathogenesis. IMPORTANCE: This work demonstrates that cell-to-cell transmission of HCV depends on ApoE but not ApoB. The data also indicate that ApoB is required for the assembly of cell-free infective particles, strongly suggesting the existence of mechanisms involving VLDL components that differentially regulate cell-free and cell-to-cell HCV transmission. These data clarify some of the questions regarding the role of VLDL in HCV pathogenesis and the transmission of the virus cell to cell as a possible mechanism of immune evasion and open the door to therapeutic intervention.


Subject(s)
Apolipoproteins B/metabolism , Apolipoproteins E/metabolism , Hepacivirus/pathogenicity , Hepatitis C/transmission , Hepatocytes/metabolism , Hepatocytes/virology , Apolipoproteins B/antagonists & inhibitors , Apolipoproteins B/genetics , Apolipoproteins E/antagonists & inhibitors , Apolipoproteins E/genetics , Cell Line , Cell-Free System , Gene Knockdown Techniques , Hepacivirus/genetics , Hepacivirus/physiology , Hepatitis C/metabolism , Hepatitis C/virology , Host-Pathogen Interactions/physiology , Humans , Lipoproteins, VLDL/metabolism , Models, Biological , Virus Assembly/physiology
11.
J Hepatol ; 63(4): 813-21, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26070407

ABSTRACT

BACKGROUND & AIMS: Soraphen A (SorA) is a myxobacterial metabolite that inhibits the acetyl-CoA carboxylase, a key enzyme in lipid biosynthesis. We have previously identified SorA to efficiently inhibit the human immunodeficiency virus (HIV). The aim of the present study was to evaluate the capacity of SorA and analogues to inhibit hepatitis C virus (HCV) infection. METHODS: SorA inhibition capacity was evaluated in vitro using cell culture derived HCV, HCV pseudoparticles and subgenomic replicons. Infection studies were performed in the hepatoma cell line HuH7/Scr and in primary human hepatocytes. The effects of SorA on membranous web formation were analysed by electron microscopy. RESULTS: SorA potently inhibits HCV infection at nanomolar concentrations. Obtained EC50 values were 0.70 nM with a HCV reporter genome, 2.30 nM with wild-type HCV and 2.52 nM with subgenomic HCV replicons. SorA neither inhibited HCV RNA translation nor HCV entry, as demonstrated with subgenomic HCV replicons and HCV pseudoparticles, suggesting an effect on HCV replication. Consistent with this, evidence was obtained that SorA interferes with formation of the membranous web, the site of HCV replication. Finally, a series of natural and synthetic SorA analogues helped to establish a first structure-activity relationship. CONCLUSIONS: SorA has a very potent anti-HCV activity. Since it also interferes with the membranous web formation, SorA is an excellent tool to unravel the mechanism of HCV replication.


Subject(s)
Hepacivirus/genetics , Hepatitis C/drug therapy , Hepatocytes/drug effects , Macrolides/pharmacology , RNA, Viral/genetics , Virus Replication/drug effects , Antiviral Agents/pharmacology , Cell Line , Hepacivirus/drug effects , Hepatitis C/pathology , Hepatitis C/virology , Hepatocytes/ultrastructure , Hepatocytes/virology , Humans , Microscopy, Electron
12.
J Virol ; 88(1): 667-78, 2014 Jan.
Article in English | MEDLINE | ID: mdl-24173227

ABSTRACT

Serine is encoded by two divergent codon types, UCN and AGY, which are not interchangeable by a single nucleotide substitution. Switching between codon types therefore occurs via intermediates (threonine or cysteine) or via simultaneous tandem substitutions. Hepatitis C virus (HCV) chronically infects 2 to 3% of the global population. The highly variable glycoproteins E1 and E2 decorate the surface of the viral envelope, facilitate cellular entry, and are targets for host immunity. Comparative sequence analysis of globally sampled E1E2 genes, coupled with phylogenetic analysis, reveals the signatures of multiple archaic codon-switching events at seven highly conserved serine residues. Limited detection of intermediate phenotypes indicates that associated fitness costs restrict their fixation in divergent HCV lineages. Mutational pathways underlying codon switching were probed via reverse genetics, assessing glycoprotein functionality using multiple in vitro systems. These data demonstrate selection against intermediate phenotypes can act at the structural/functional level, with some intermediates displaying impaired virion assembly and/or decreased capacity for target cell entry. These effects act in residue/isolate-specific manner. Selection against intermediates is also provided by humoral targeting, with some intermediates exhibiting increased epitope exposure and enhanced neutralization sensitivity, despite maintaining a capacity for target cell entry. Thus, purifying selection against intermediates limits their frequencies in globally sampled strains, with divergent functional constraints at the protein level restricting the fixation of deleterious mutations. Overall our study provides an experimental framework for identification of barriers limiting viral substitutional evolution and indicates that serine codon-switching represents a genomic "fossil record" of historical purifying selection against E1E2 intermediate phenotypes.


Subject(s)
Codon , Evolution, Molecular , Glycoproteins/chemistry , Hepacivirus/chemistry , Serine/chemistry , Glycoproteins/genetics , Phenotype , Phylogeny
13.
J Hepatol ; 59(2): 271-8, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23548198

ABSTRACT

BACKGROUND & AIMS: The detection of native hepatitis C virus (HCV) antigens in liver tissue may be relevant to diagnostic purposes and to better understand the pathogenesis of HCV infection. The aim of our study was to characterize HCV antigens in liver grafts. METHODS: We selected 32 liver transplant (LT) recipients with recurrent hepatitis C. HCV core and NS5A antigens were detected in formalin-fixed, paraffin-embedded (FFPE) liver biopsies obtained immediately after graft reperfusion (negative controls), during the acute phase of HCV infection (1-6 months) and during follow-up (7-74 months) after LT. Viral antigens were assessed by immunohistochemistry and confocal microscopy. RESULTS: All reperfusion biopsies were negative for both antigens. Core protein was detected in 75% and 33% of acute phase and follow-up biopsies, respectively. HCV antigens were not detected in any of the 10 samples from patients who cleared HCV after antiviral treatment. Immunostaining was hepatocellular, with a granular cytoplasmic pattern and a wide spectrum of intensity. We found a significant association between viral load and the presence of HCV core-positive hepatocytes (p=0.004). NS5A colocalized strongly with core (66%) and adipophilin (36%), supporting the localization of core and NS5A around lipid droplets. A detailed three-dimensional analysis showed that NS5A surrounded the core and adipophilin-positive areas. CONCLUSIONS: HCV antigens can be detected in FFPE liver biopsies by immunohistochemistry. The in vivo colocalization of core and NS5A proteins around the lipid droplets supports that the latter may play a role in virus particle production, similar to what reported in vitro.


Subject(s)
Hepatitis C Antigens/metabolism , Hepatitis C/diagnosis , Hepatitis C/etiology , Liver Transplantation/adverse effects , Liver/virology , Acute Disease , Adult , Aged , Female , Follow-Up Studies , Hepacivirus/immunology , Hepacivirus/isolation & purification , Hepatitis C/virology , Humans , Imaging, Three-Dimensional , Immunohistochemistry , Male , Microscopy, Confocal , Middle Aged , Recurrence , Viral Core Proteins/immunology , Viral Core Proteins/metabolism , Viral Nonstructural Proteins/metabolism
15.
Gastroenterol Hepatol ; 36(4): 280-93, 2013 Apr.
Article in Spanish | MEDLINE | ID: mdl-23490024

ABSTRACT

Since the discovery of the hepatitis C virus (HCV), a plethora of experimental models have evolved, allowing the virus's life cycle and the pathogenesis of associated liver diseases to be investigated. These models range from inoculation of cultured cells with serum from patients with hepatitis C to the use of surrogate models for the study of specific stages of the HCV life cycle: retroviral pseudoparticles for the study of HCV entry, replicons for the study of HCV replication, and the HCV cell culture model, which reproduces the entire life cycle (replication and production of infectious particles). The use of these tools has been and remains crucial to identify potential therapeutic targets in the different stages of the virus's life cycle and to screen new antiviral drugs. A clear example is the recent approval of two viral protease inhibitors (boceprevir and telaprevir) in combination with pegylated interferon and ribavirin for the treatment of chronic hepatitis C. This review analyzes the advances made in the molecular biology of HCV and highlights possible candidates as therapeutic targets for the treatment of HCV infection.


Subject(s)
Hepacivirus/genetics , Antiviral Agents/pharmacology , Antiviral Agents/therapeutic use , Carcinoma, Hepatocellular/etiology , Clinical Trials, Phase I as Topic , Drug Resistance, Viral , Drug Therapy, Combination , Genome, Viral , Hepacivirus/drug effects , Hepacivirus/isolation & purification , Hepacivirus/physiology , Hepacivirus/ultrastructure , Hepatitis C/virology , Humans , Liver Cirrhosis/etiology , Liver Neoplasms/etiology , Molecular Targeted Therapy , Polyethylene Glycols/therapeutic use , RNA, Viral/genetics , Receptors, Virus/drug effects , Viral Proteins/antagonists & inhibitors , Viral Proteins/genetics , Viral Proteins/physiology , Virus Cultivation/methods , Virus Replication
16.
J Hepatol ; 56(2): 355-8, 2012 Feb.
Article in English | MEDLINE | ID: mdl-21889467

ABSTRACT

BACKGROUND & AIMS: Recipient and donor IL28B polymorphisms seem to play an important role in the response to hepatitis C treatment after liver transplantation (LT). Since donor peripheral blood mononuclear cells (PBMC) are not always available, the aim of our study was to assess whether follow-up biopsies obtained after LT could be used to determine donor IL28B genotype. METHODS: Genotyping of IL28B rs12979860 was performed by TaqMan real-time PCR and direct sequencing in 56 HCV-infected LT recipients and their donors. Liver biopsies were obtained at the moment of LT (reperfusion) and at any time when clinically indicated (follow-up). Direct sequencing always confirmed the real-time PCR results. RESULTS: Genotyping of donor IL28B rs12979860 polymorphisms showed a 100% match both in PBMC and reperfusion biopsies. The frequency of IL28B rs12979860 polymorphisms differed significantly between donors and follow-up biopsies (p=0.024). We found an enrichment of the IL28B rs12979860 CT genotype (72%) in follow-up biopsies compared to donor samples (46%). Recipient alleles were clearly detected in 14 heterozygous follow-up samples: 10 CT/CC, 1 CT/TT, and 3 TT/CC (recipient/donor), thus reflecting a mixture of both donor and recipient genotypes. CONCLUSIONS: Our results support that follow-up liver biopsies from LT recipients are not suitable for determining donor IL28B rs12979860 genotype by TaqMan real-time PCR or direct sequencing and that PBMC or reperfusion biopsies should be used instead. Thus, it is very important to obtain adequate samples in order to accurately determine the relative contributions of both donor and recipient.


Subject(s)
Interleukins/genetics , Liver Transplantation , Polymorphism, Single Nucleotide , Base Sequence , Biopsy , Cohort Studies , DNA Primers/genetics , Genetic Techniques , Hepatitis C, Chronic/genetics , Hepatitis C, Chronic/immunology , Hepatitis C, Chronic/surgery , Hepatitis C, Chronic/virology , Humans , Interferons , Leukocytes, Mononuclear/immunology , Liver/immunology , Liver Transplantation/immunology , Polymerase Chain Reaction , Tissue Donors
17.
PLoS Pathog ; 5(6): e1000475, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19521536

ABSTRACT

With the advent of subgenomic hepatitis C virus (HCV) replicons, studies of the intracellular steps of the viral replication cycle became possible. These RNAs are capable of self-amplification in cultured human hepatoma cells, but save for the genotype 2a isolate JFH-1, efficient replication of these HCV RNAs requires replication enhancing mutations (REMs), previously also called cell culture adaptive mutations. These mutations cluster primarily in the central region of non-structural protein 5A (NS5A), but may also reside in the NS3 helicase domain or at a distinct position in NS4B. Most efficient replication has been achieved by combining REMs residing in NS3 with distinct REMs located in NS4B or NS5A. However, in spite of efficient replication of HCV genomes containing such mutations, they do not support production of infectious virus particles. By using the genotype 1b isolate Con1, in this study we show that REMs interfere with HCV assembly. Strongest impairment of virus formation was found with REMs located in the NS3 helicase (E1202G and T1280I) as well as NS5A (S2204R), whereas a highly adaptive REM in NS4B still allowed virus production although relative levels of core release were also reduced. We also show that cells transfected with the Con1 wild type genome or the genome containing the REM in NS4B release HCV particles that are infectious both in cell culture and in vivo. Our data provide an explanation for the in vitro and in vivo attenuation of cell culture adapted HCV genomes and may open new avenues for the development of fully competent culture systems covering the therapeutically most relevant HCV genotypes.


Subject(s)
Hepacivirus/genetics , Hepacivirus/physiology , Mutation , Virion/physiology , Virus Replication/physiology , Cell Line , Enzyme-Linked Immunosorbent Assay , Hepatitis C Antigens/genetics , Hepatitis C Antigens/metabolism , Humans , Viral Core Proteins/genetics , Viral Core Proteins/metabolism , Viral Envelope Proteins/genetics , Viral Envelope Proteins/metabolism , Viral Nonstructural Proteins/genetics , Viral Nonstructural Proteins/metabolism , Virion/chemistry , Virion/pathogenicity , Virus Cultivation
18.
Hepatology ; 50(1): 46-55, 2009 Jul.
Article in English | MEDLINE | ID: mdl-19333911

ABSTRACT

UNLABELLED: Coinfection with hepatitis B virus (HBV) and hepatitis C virus (HCV) has been associated with severe liver disease and frequent progression to cirrhosis and hepatocellular carcinoma. Clinical evidence suggests reciprocal replicative suppression of the two viruses, or viral interference. However, interactions between HBV and HCV have been difficult to study due to the lack of appropriate model systems. We have established a novel model system to investigate interactions between HBV and HCV. Stable Huh-7 cell lines inducibly replicating HBV were transfected with selectable HCV replicons or infected with cell culture-derived HCV. In this system, both viruses were found to replicate in the same cell without overt interference. Specific inhibition of one virus did not affect the replication and gene expression of the other. Furthermore, cells harboring replicating HBV could be infected with cell culture-derived HCV, arguing against superinfection exclusion. Finally, cells harboring replicating HBV supported efficient production of infectious HCV. CONCLUSION: HBV and HCV can replicate in the same cell without evidence for direct interference in vitro. Therefore, the viral interference observed in coinfected patients is probably due to indirect mechanisms mediated by innate and/or adaptive host immune responses. These findings provide new insights into the pathogenesis of HBV-HCV coinfection and may contribute to its clinical management in the future.


Subject(s)
Hepatitis B/complications , Hepatitis B/virology , Hepatitis C/complications , Hepatitis C/virology , Viral Interference , Cells, Cultured/virology , Humans
19.
Front Immunol ; 11: 129, 2020.
Article in English | MEDLINE | ID: mdl-32161581

ABSTRACT

Background: Chronic hepatitis C virus (HCV) infection impairs natural killer (NK) cell phenotype and function. Whether restoration of NK cells occurs after successful interferon (IFN)-free therapies remains a controversial issue. Aim: To analyze how HCV-related liver cirrhosis impacts changes in NK cells prior and post-IFN-free therapies. Methods: NK cell analysis by multicolor flow cytometry was performed in HCV-infected patients with (n = 17) and without (n = 14) cirrhosis at baseline, week 4 during therapy, and weeks 12 and 48 after the end of therapy (FU12 and FU48, respectively). Non-HCV cirrhotic patients (n = 12) and healthy individuals (n = 12) served as controls. Results: At baseline, HCV cirrhotic patients presented an altered distribution of NK subsets (CD56dim and CD56bright) with higher expression of NKp46, HLA-DR, NKp30, KIR2DL2/L3, NKG2A, and CD85j receptors compared to healthy controls. All frequencies normalized by FU48, except for CD85j+ cells. Likewise, substantial alterations were detected in NK cell function assessed by (i) signal transducer and activator of transcription 1 (STAT1) and phosphorylated levels of STAT1 and STAT4, (ii) degranulation (CD107a), (iii) cytotoxicity [tumor necrosis factor-related apoptosis-inducing ligand (TRAIL)], and (iv) cytokine production [IFN-γ and tumor necrosis factor-α (TNF-α)]. Of note, NK cell function at FU48 remained partially impaired. In contrast, non-cirrhotics showed normal baseline frequencies of HLA-DR-, NKG2A-, and CD85j-expressing NK cells. Importantly, altered baseline frequencies of NK cell subsets and NKp46+ CD56dim cells, as well as NK cell function, were rapidly and completely restored. Conclusions: NK cell phenotype alterations persist after HCV eradication in cirrhotic patients, while their function is only partially restored, compromising immune restoration and immunosurveillance.


Subject(s)
Antiviral Agents/immunology , Hepatitis C, Chronic/drug therapy , Hepatitis C, Chronic/immunology , Killer Cells, Natural/drug effects , Liver Cirrhosis/drug therapy , Liver Cirrhosis/immunology , Adult , Aged , Aged, 80 and over , Cohort Studies , Cytokines/metabolism , Female , Healthy Volunteers , Humans , Longitudinal Studies , Male , Middle Aged , Phenotype , Prospective Studies
20.
Gastroenterology ; 135(5): 1719-1728.e1, 2008 Nov.
Article in English | MEDLINE | ID: mdl-18718838

ABSTRACT

BACKGROUND & AIMS: Hepatitis C virus (HCV) is a leading cause of chronic hepatitis worldwide. Viral attachment and entry, representing the first steps of virus-host cell interactions, are major targets of adaptive host cell defenses. The mechanisms of antibody-mediated neutralization by host neutralizing responses in HCV infection are only poorly understood. Retroviral HCV pseudotypes (HCVpp) and recombinant cell culture-derived HCV (HCVcc) have been successfully used to study viral entry and antibody-mediated neutralization. METHODS: In this study, we used these model systems to investigate the mechanism of antibody-mediated neutralization by monoclonal antienvelope antibodies and polyclonal anti-HCV immunoglobulins purified from HCV-infected patients. RESULTS: Using a panel of monoclonal antienvelope antibodies, we identified an epitope within the E1 glycoprotein targeted by human neutralizing antibodies during postbinding events. Interestingly, we observed that host neutralizing responses in the majority of HCV-infected individuals include antibodies targeting HCV entry after binding of the virus to the target cell membrane. Using a kinetic assay based on HCVpp and HCVcc entry, we demonstrate that purified antiviral immunoglobulins derived from individual HCV-infected patients appear to inhibit HCV infection at an entry step closely linked to CD81 and scavenger receptor BI (SR-BI). CONCLUSIONS: Our results indicate that host neutralizing responses in HCV-infected patients target viral entry after HCV binding most likely related to HCV-CD81, and HCV-SR-BI interactions, as well as membrane fusion. These findings have implications not only for the understanding of the pathogenesis of HCV infection but also for the design of novel immunotherapeutic and preventive strategies.


Subject(s)
Antibodies, Monoclonal/therapeutic use , Antigens, CD/immunology , Hepacivirus/immunology , Hepatitis C Antibodies/immunology , Hepatitis C, Chronic/drug therapy , Membrane Fusion/drug effects , Scavenger Receptors, Class B/immunology , Adult , Aged , Antibodies, Anti-Idiotypic/immunology , Antigens, CD/drug effects , Antigens, CD/metabolism , Cells, Cultured , Hepatitis C, Chronic/immunology , Hepatitis C, Chronic/virology , Humans , Immunoenzyme Techniques , Immunoglobulin G/immunology , Middle Aged , Receptors, Virus , Scavenger Receptors, Class B/drug effects , Scavenger Receptors, Class B/metabolism , Tetraspanin 28 , Viral Envelope Proteins/drug effects , Viral Envelope Proteins/immunology , Viral Envelope Proteins/metabolism
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