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1.
Int J Mol Sci ; 25(14)2024 Jul 19.
Article in English | MEDLINE | ID: mdl-39063145

ABSTRACT

Nanotechnology is rapidly advancing towards the development of applications for sustainable plant growth and photosynthesis optimization. The nanomaterial/plant interaction has been intensively investigated; however, there is still a gap in knowledge regarding their effect on crop seed development and photosynthetic performance. In the present work, we apply a priming procedure with 10 and 50 mg/L Pluronic-P85-grafted single-walled carbon nanotubes (P85-SWCNT) on garden pea seeds and examine the germination, development, and photosynthetic activity of young seedlings grown on soil substrate. The applied treatments result in a distorted topology of the seed surface and suppressed (by 10-19%) shoot emergence. No priming-induced alterations in the structural and functional features of the photosynthetic apparatus in 14-day-old plants are found. However, photosynthetic gas exchange measurements reveal reduced stomatal conductance (by up to 15%) and increased intrinsic water use efficiency (by 12-15%), as compared to hydro-primed variants, suggesting the better ability of plants to cope with drought stress-an assumption that needs further verification. Our study prompts further research on the stomatal behavior and dark reactions of photosynthesis in order to gain new insights into the effect of carbon nanotubes on plant performance.


Subject(s)
Nanotubes, Carbon , Photosynthesis , Pisum sativum , Seeds , Photosynthesis/drug effects , Nanotubes, Carbon/chemistry , Pisum sativum/drug effects , Pisum sativum/metabolism , Pisum sativum/growth & development , Seeds/drug effects , Seeds/growth & development , Seeds/metabolism , Germination/drug effects , Plant Stomata/drug effects , Poloxamer/chemistry , Poloxamer/pharmacology , Seedlings/drug effects , Seedlings/growth & development , Seedlings/metabolism , Light
2.
Int J Mol Sci ; 24(1)2023 Jan 02.
Article in English | MEDLINE | ID: mdl-36614231

ABSTRACT

Discovery of diagnostic biomarkers for age-related neurodegenerative pathologies (NDDs) is essential for accurate diagnosis, following disease progression and drug development. Blood plasma and blood cells are important peripheral sources for NDDs' biomarkers that, although present in lower concentrations than in cerebrospinal fluid, would allow noninvasive diagnostics. To identify new biomarkers for Parkinson's disease (PD) and amyotrophic lateral sclerosis (ALS), in this work we have evaluated the modifications in the thermodynamic behavior of blood plasma proteome exploring differential scanning calorimetry. The plasma thermodynamics reflected the complexity and heterogeneity of the two pathologies. The unfolding temperature of the most abundant plasma protein albumin and the weighted average center of the calorimetric profile appeared as the two thermodynamic signatures that reflected modifications of the plasma proteome, i.e., strong thermal stabilization of albumin and plasma proteins' interaction network, related to both pathologies. Based on those two signatures, both PD and ALS patients were stratified in two sets, except several cases with thermodynamic parameters that strongly differed from those of the calorimetric sets. Along with modifications of the plasma thermodynamic behavior, we found altered globulin levels in all PD and ALS patients' plasma (higher level of α- and ß-globulin fractions and lower level of γ-globulin fraction than the respective reference values) employing capillary electrophoresis. The presented results reveal the potential of calorimetry to indirectly identify NDDs' biomarkers in blood plasma.


Subject(s)
Amyotrophic Lateral Sclerosis , Parkinson Disease , Humans , Proteome/metabolism , Amyotrophic Lateral Sclerosis/metabolism , Biomarkers/metabolism , Plasma/metabolism , Parkinson Disease/diagnosis , Albumins , Thermodynamics
3.
Int J Mol Sci ; 24(8)2023 Apr 12.
Article in English | MEDLINE | ID: mdl-37108270

ABSTRACT

Preeclampsia (PE) presents with maternal de novo hypertension and significant proteinuria and is one of the leading causes of maternal and perinatal morbidity and mortality with unknown etiology. The disease is associated with inflammatory vascular response and severe red blood cell (RBC) morphology changes. This study examined the nanoscopic morphological changes of RBCs from PE women versus normotensive healthy pregnant controls (PCs) and non-pregnant controls (NPCs) applying atomic force microscopy (AFM) imaging. The results revealed that the membrane of fresh PE RBCs differed significantly from healthy ones by the presence of invaginations and protrusions and an increased roughness value (Rrms) (4.7 ± 0.8 nm for PE vs. 3.8 ± 0.5 nm and 2.9 ± 0.4 nm for PCs and NPCs, respectively). PE-cells aging resulted in more pronounced protrusions and concavities, with exponentially increasing Rrms values, in contrast to the controls, where the Rrms parameter decreased linearly with time. The Rrms, evaluated on a 2 × 2 µm2 scanned area, for senescent PE cells (13 ± 2.0 nm) was significantly higher (p < 0.01) than that of PCs (1.5 ± 0.2 nm) and NPCs (1.9 ± 0.2 nm). Furthermore, the RBCs from PE patients appeared fragile, and often only ghosts were observed instead of intact cells at 20-30 days of aging. Oxidative-stress simulation on healthy cells led to RBC membrane features similar to those observed for PE cells. The results demonstrate that the most pronounced effects on RBCs in PE patients are related to impaired membrane homogeneity and strongly altered roughness values, as well as to vesiculation and ghost formation in the course of cell aging.


Subject(s)
Pre-Eclampsia , Pregnancy , Humans , Female , Microscopy, Atomic Force/methods , Pre-Eclampsia/metabolism , Longevity , Erythrocytes , Erythrocyte Membrane/metabolism
4.
Int J Mol Sci ; 24(1)2022 Dec 30.
Article in English | MEDLINE | ID: mdl-36614084

ABSTRACT

Favism uniquely arises from a genetic defect of the Glucose-6 Phosphate Dehydrogenase (G6PD) enzyme and results in a severe reduction of erythrocytes' (RBCs) reducing power that impairs the cells' ability to respond to oxidative stresses. After exposure to fava beans or a few other drugs, the patients experience acute hemolytic anemia due to RBCs' lysis both intra and extra-vascularly. In the present paper, we compared selected biochemical, biophysical, and ultra-morphological properties of normal RBCs and cells from favism patients measured along cellular aging. Along the aging path, the cells' characteristics change, and their structural and functional properties degrade for both samples, but with different patterns and effectors that have been characterized in biophysical and biochemical terms. In particular, the analysis revealed distinct metabolic regulation in G6DP-deficient cells that determines important peculiarities in the cell properties during aging. Remarkably, the initial higher fragility and occurrence of structural/morphological alterations of favism cells develop, with longer aging times, into a stronger resistance to external stresses and higher general resilience. This surprisingly higher endurance against cell aging has been related to a special mechanism of metabolic regulation that permits lower energy consumption in environmental stress conditions. Our results provided a direct and coherent link between the RBCs' metabolic regulation and the cell properties that would not have been possible to establish without an investigation performed during aging. The consequences of this new knowledge, in particular, can be discussed in a more general context, such as understanding the role of the present findings in determining the characteristics of the favism pathology as a whole.


Subject(s)
Anemia, Hemolytic , Favism , Glucosephosphate Dehydrogenase Deficiency , Vicia faba , Humans , Favism/genetics , Erythrocytes/pathology , Cellular Senescence , Glucosephosphate Dehydrogenase Deficiency/genetics
5.
Int J Mol Sci ; 23(15)2022 Aug 06.
Article in English | MEDLINE | ID: mdl-35955896

ABSTRACT

Early pregnancy loss (EPL) is a relatively common pathology of which almost 50% of cases remain idiopathic. In the search for novel biomarkers, differential scanning calorimetry (DSC) is intensively used to characterize the thermodynamic behavior of blood plasma/serum proteome in health and disease. Herein, for the first time, we investigate the DSC denaturation profiles of blood plasma derived from patients suffering EPL compared to healthy pregnant and non-pregnant women. Data analysis reveals that 58% of the EPL thermograms differ significantly from those of healthy pregnant women. Thermal stabilization of a fraction of albumin-assigned transition with concomitant suppression of the major and enhancement of the globulin-assigned transition are characteristic features of EPL calorimetric profiles that could be used as a new indicator of a risk pregnancy. The presented results suggest an altered composition or intermolecular interactions of the plasma proteome of women with EPL. In addition, the alterations of the EPL thermograms correlate with the increased blood levels of tumor necrosis factor-α (TNF-α) and interleukin-6 (IL-6) and a higher prevalence of the polymorphism in the plasminogen activator inhibitor type-1 (PAI-1) gene, suggesting an expression of an overall enhanced immune response. The concomitant changes in plasma thermograms confirm the potential of the DSC approach for distinguishing changes in the pathological state of the blood plasma proteome.


Subject(s)
Abortion, Spontaneous , Proteome , Calorimetry, Differential Scanning , Cytokines/genetics , Female , Genotype , Humans , Plasma/chemistry , Plasminogen Activator Inhibitor 1/genetics , Pregnancy , Proteome/genetics
6.
Int J Mol Sci ; 23(9)2022 Apr 19.
Article in English | MEDLINE | ID: mdl-35562904

ABSTRACT

Early pregnancy loss (EPL) is estimated to be between 15 and 20% of all adverse pregnancies. Approximately, half of EPL cases have no identifiable cause. Herein, we apply atomic force microscopy to evaluate the alteration of morphology and nanomechanics of erythrocytes from women with EPL with unknown etiology, as compared to healthy pregnant (PC) and nonpregnant women (NPC). Freshly isolated erythrocytes from women with EPL differ in both the roughness value (4.6 ± 0.3 nm, p < 0.05), and Young's modulus (2.54 ± 0.6 MPa, p < 0.01) compared to the values for NPC (3.8 ± 0.4 nm and 0.94 ± 0.2 MPa, respectively) and PC (3.3 ± 0.2 nm and 1.12 ± 0.3 MPa, respectively). Moreover, we find a time-dependent trend for the reduction of the cells' morphometric parameters (cells size and surface roughness) and the membrane elasticity­much faster for EPL than for the two control groups. The accelerated aging of EPL erythrocytes is expressed in faster morphological shape transformation and earlier occurrence of spiculated and spherical-shaped cells, reduced membrane roughness and elasticity with aging evolution. Oxidative stress in vitro contributed to the morphological cells' changes observed for EPL senescent erythrocytes. The ultrastructural characteristics of cells derived from women with miscarriages show potential as a supplementary mark for a pathological state.


Subject(s)
Abortion, Spontaneous , Abortion, Spontaneous/pathology , Elastic Modulus , Elasticity , Erythrocytes/pathology , Female , Humans , Microscopy, Atomic Force , Pregnancy
7.
Int J Mol Sci ; 22(9)2021 May 05.
Article in English | MEDLINE | ID: mdl-34063012

ABSTRACT

Single-walled carbon nanotubes (SWCNTs) emerge as promising novel carbon-based nanoparticles for use in biomedicine, pharmacology and precision agriculture. They were shown to penetrate cell walls and membranes and to physically interact and exchange electrons with photosynthetic complexes in vitro. Here, for the first time, we studied the concentration-dependent effect of foliar application of copolymer-grafted SWCNTs on the structural and functional characteristics of intact pea plants. The lowest used concentration of 10 mg L-1 did not cause any harmful effects on the studied leaf characteristics, while abundant epicuticular wax generation on both leaf surfaces was observed after 300 mg L-1 treatment. Swelling of both the granal and the stromal regions of thylakoid membranes was detected after application of 100 mg L-1 and was most pronounced after 300 mg L-1. Higher SWCNT doses lead to impaired photosynthesis in terms of lower proton motive force generation, slower generation of non-photochemical quenching and reduced zeaxanthin content; however, the photosystem II function was largely preserved. Our results clearly indicate that SWCNTs affect the photosynthetic apparatus in a concentration-dependent manner. Low doses (10 mg L-1) of SWCNTs appear to be a safe suitable object for future development of nanocarriers for substances that are beneficial for plant growth.


Subject(s)
Chloroplasts/ultrastructure , Nanotubes, Carbon/chemistry , Photosynthesis , Pisum sativum/physiology , Pisum sativum/ultrastructure , Plant Leaves/anatomy & histology , Carbon Dioxide/metabolism , Carotenoids/metabolism , Cell Membrane Permeability , Chlorophyll/metabolism , Fluorescence , Nanotubes, Carbon/ultrastructure , Photosystem II Protein Complex/metabolism , Plant Leaves/ultrastructure , Protons , Thylakoids/metabolism , Time Factors , Xanthophylls/metabolism
8.
Int J Mol Sci ; 22(15)2021 Jul 21.
Article in English | MEDLINE | ID: mdl-34360543

ABSTRACT

Pregnancy is associated with hypercoagulation states and increased thrombotic risk, especially in women with thrombophilia. We combine atomic force microscopy (AFM) and flow cytometry to examine the morphology and nanomechanics of platelets derived from women with early pregnancy loss (EPL) and control pregnant (CP) and non-pregnant (CNP) women. Both control groups exhibit similar morphometric parameters (height and surface roughness) and membrane stiffness of platelets. EPL patients' platelets, on the other hand, are more activated than the control groups, with prominent cytoskeletal rearrangement. In particular, reduced membrane roughness (22.9 ± 6 nm vs. 39.1 ± 8 nm) (p < 0.05) and height (692 ± 128 nm vs. 1090 ± 131 nm) (p < 0.05), strong alteration in the membrane Young modulus, increased production of platelets' microparticles, and higher expression of procoagulant surface markers, as well as increased occurrence of thrombophilia (FVL, FII20210A, PLA1/A2, MTHFR C677T or 4G/5G PAI-1) polymorphisms were found. We suggest that the carriage of thrombophilic mutations triggers structural and nanomechanical abnormalities in platelets, resulting in their increased activation. The activation state of platelets can be well characterized by AFM, and the morphometric and nanomechanical characteristics might serve as a new criterion for evaluation of the cause of miscarriage and offer the prospect of an innovative approach serving for diagnostic purposes.


Subject(s)
Abortion, Habitual/pathology , Blood Platelets/pathology , Nanostructures/chemistry , Polymorphism, Genetic , Thrombophilia/complications , Abortion, Habitual/etiology , Abortion, Habitual/metabolism , Adult , Blood Platelets/metabolism , Case-Control Studies , Female , Humans , Pregnancy
9.
Int J Mol Sci ; 23(1)2021 Dec 25.
Article in English | MEDLINE | ID: mdl-35008653

ABSTRACT

Human red blood cells (RBCs) are unique cells with the remarkable ability to deform, which is crucial for their oxygen transport function, and which can be significantly altered under pathophysiological conditions. Here we performed ultrastructural analysis of RBCs as a peripheral cell model, looking for specific signatures of the neurodegenerative pathologies (NDDs)-Parkinson's disease (PD), amyotrophic lateral sclerosis (ALS) and Alzheimer's disease (AD), utilizing atomic force (AFM) and conventional optical (OM) microscopy. We found significant differences in the morphology and stiffness of RBCs isolated from patients with the selected NDDs and those from healthy individuals. Neurodegenerative pathologies' RBCs are characterized by a reduced abundance of biconcave discoid shape, lower surface roughness and a higher Young's modulus, compared to healthy cells. Although reduced, the biconcave is still the predominant shape in ALS and AD cells, while the morphology of PD is dominated by crenate cells. The features of RBCs underwent a marked aging-induced transformation, which followed different aging pathways for NDDs and normal healthy states. It was found that the diameter, height and volume of the different cell shape types have different values for NDDs and healthy cells. Common and specific morphological signatures of the NDDs were identified.


Subject(s)
Aging/pathology , Erythrocytes/pathology , Neurodegenerative Diseases/pathology , Adult , Aged , Aged, 80 and over , Elastic Modulus/physiology , Erythrocyte Count/methods , Female , Humans , Male , Middle Aged
10.
Molecules ; 26(19)2021 Oct 01.
Article in English | MEDLINE | ID: mdl-34641502

ABSTRACT

Single-walled carbon nanotubes (SWCNT) have recently been attracting the attention of plant biologists as a prospective tool for modulation of photosynthesis in higher plants. However, the exact mode of action of SWCNT on the photosynthetic electron transport chain remains unknown. In this work, we examined the effect of foliar application of polymer-grafted SWCNT on the donor side of photosystem II, the intersystem electron transfer chain and the acceptor side of photosystem I. Analysis of the induction curves of chlorophyll fluorescence via JIP test and construction of differential curves revealed that SWCNT concentrations up to 100 mg/L did not affect the photosynthetic electron transport chain. SWCNT concentration of 300 mg/L had no effect on the photosystem II donor side but provoked inactivation of photosystem II reaction centres and slowed down the reduction of the plastoquinone pool and the photosystem I end acceptors. Changes in the modulated reflection at 820 nm, too, indicated slower re-reduction of photosystem I reaction centres in SWCNT-treated leaves. We conclude that SWCNT are likely to be able to divert electrons from the photosynthetic electron transport chain at the level of photosystem I end acceptors and plastoquinone pool in vivo. Further research is needed to unequivocally prove if the observed effects are due to specific interaction between SWCNT and the photosynthetic apparatus.


Subject(s)
Nanotubes, Carbon , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/metabolism , Pisum sativum/drug effects , Chlorophyll/metabolism , Electron Transport/drug effects , Fluorescence , Nanotubes, Carbon/chemistry , Pisum sativum/metabolism , Plant Leaves/drug effects , Plant Leaves/metabolism , Polymers/chemistry
11.
Photosynth Res ; 145(2): 179-188, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32720110

ABSTRACT

The major light-harvesting system in cyanobacteria, the phycobilisome, is an essential component of the photosynthetic apparatus that regulates the utilization of the natural light source-the Sun. Earlier works revealed that the thylakoid membrane composition and its physical properties might have an important role in antennas docking. Polyunsaturated lipids and xanthophylls are among the most significant modulators of the physical properties of thylakoid membranes. In the nature, the action of these molecules is orchestrated in response to environmental stimuli among which the growth temperature is the most influential. In order to further clarify the significance of thylakoid membrane physical properties for the phycobilisomes assembly (i.e. structural integrity) and their ability to efficiently direct the excitation energy towards the photosynthetic complexes, in this work, we utilize cyanobacterial Synechocystis sp. PCC 6803 mutants deficient in polyunsaturated lipids (AD mutant) and xanthophylls (RO mutant), as well as a strain depleted of both xanthophylls and polyunsaturated lipids (ROAD multiple mutant). For the first time, we discuss the effect of those mutations on the phycobilisomes assembly, integrity and functionality at optimal (30 °C) and moderate low (25 °C) and high (35 °C) temperatures. Our results show that xanthophyll depletion exerts a much stronger effect on both phycobilisome's integrity and the response of cells to growth at suboptimal temperatures than lipid unsaturation level. The strongest effects were observed for the combined ROAD mutant, which exhibited thermally destabilized phycobilisomes and a population of energetically uncoupled phycocyanin units.


Subject(s)
Carotenoids/metabolism , Photosynthesis , Photosynthetic Reaction Center Complex Proteins/metabolism , Phycobilisomes/metabolism , Synechocystis/metabolism , Lipid Metabolism , Mutation , Phycocyanin/metabolism , Synechocystis/genetics , Temperature , Thylakoids/metabolism , Xanthophylls/metabolism
12.
J Bioenerg Biomembr ; 50(6): 425-435, 2018 12.
Article in English | MEDLINE | ID: mdl-30607760

ABSTRACT

Thylakoids are highly protein-enriched membranes that harbor a number of multicomponent photosynthetic complexes. Similarly to other biological membranes the protein constituents are heterogeneously distributed laterally in the plane of the membrane, however the specific segregation into stacked (grana patches) and unstacked (stroma lamellae) membrane layers is a unique feature of the thylakoid. Both the lateral and the vertical arrangements of the integral membrane proteins within the three-dimensional thylakoid ultrastructure are thought to have important physiological function. In this work we explore the role of membrane stacking for the thermal stability of the photosynthetic complexes in thylakoid membranes. By means of circular dichroism and differential scanning calorimetry we demonstrate that the thermal stability of the monomeric and trimeric forms of the major light harvesting complex of photosystem II (LHCII) increases upon unstacking. This effect was suggested to be due to the detachment of LHCII from photosystem II and consequent attachment to photosystem I subunits and/or the fluidization of the lipid matrix upon unstacking. The changes in the physical properties of the protein and lipid membrane components upon unstacking result in strongly reduced photosystem II excitation energy utilization.


Subject(s)
Light , Membrane Lipids/metabolism , Photosystem I Protein Complex/metabolism , Photosystem II Protein Complex/metabolism , Pisum sativum/metabolism , Circular Dichroism , Membrane Lipids/chemistry , Pisum sativum/chemistry , Photosystem I Protein Complex/chemistry , Photosystem II Protein Complex/chemistry
13.
Photosynth Res ; 137(1): 95-104, 2018 Jul.
Article in English | MEDLINE | ID: mdl-29322483

ABSTRACT

Phycobilisomes (PBSs) are supramolecular pigment-protein complexes that serve as light-harvesting antennae in cyanobacteria. They are built up by phycobiliproteins assembled into allophycocyanin core cylinders (ensuring the physical interaction with the photosystems) and phycocyanin rods (protruding from the cores and having light-harvesting function), the whole PBSs structure being maintained by linker proteins. PBSs play major role in light-harvesting optimization in cyanobacteria; therefore, the characterization of their structural integrity in intact cells is of great importance. The present study utilizes differential scanning calorimetry and spectroscopy techniques to explore for the first time, the thermodynamic stability of PBSs in intact Synechocystis sp. PCC 6803 cells and to probe its alteration as a result of mutations or under different growth conditions. As a first step, we characterize the thermodynamic behavior of intact and dismantled PBSs isolated from wild-type cells (having fully assembled PBSs) and from CK mutant cells (that lack phycocyanin rods and contain only allophycocyanin cores), and identified the thermal transitions of phycocyanin and allophycocyanin units in vitro. Next, we demonstrate that in intact cells PBSs exhibit sharp, high amplitude thermal transition at about 63 °C that strongly depends on the structural integrity of the PBSs supercomplex. Our findings implicate that calorimetry could offer a valuable approach for the assessment of the influence of variety of factors affecting the stability and structural organization of phycobilisomes in intact cyanobacterial cells.


Subject(s)
Phycobilisomes/chemistry , Synechocystis/chemistry , Calorimetry, Differential Scanning , Mutation , Synechocystis/genetics , Thermodynamics
14.
Eur Biophys J ; 47(5): 549-559, 2018 Jul.
Article in English | MEDLINE | ID: mdl-29362827

ABSTRACT

The blood proteome has been studied extensively for identification of novel reliable disease biomarkers. In recent years, differential scanning calorimetry has emerged as a new tool for characterization of the thermodynamic properties of the major serum/plasma proteins and for the establishment of calorimetric markers for a variety of diseases. Here we applied calorimetry to monitor the effect of treatment of patients diagnosed with multiple myeloma and Waldenström's macroglobulinemia on the calorimetric profiles of patients' blood sera. The parameters derived from the calorimetric profiles were compared with the primary serum biomarkers, monoclonal immunoglobulin (M protein) concentration, and κ/λ free light chain ratio. For the secretory cases, the calorimetric parameters thermogram's shape similarity and weighted average center strongly depended on the M protein level but had lower sensitivity and specificity. By contrast, for non-secretory cases, the calorimetric parameters did not depend on the κ/λ free light chains ratio and exhibited significantly higher sensitivity and specificity than M protein levels. A combination of the immunological and calorimetric tests was found to greatly improve the sensitivity and specificity of the clinical status evaluation. The pronounced differences in blood sera thermograms before and during monitoring reflected the individual patients' response to treatment received and showed maintenance of heterogeneity during the disease course.


Subject(s)
Biomarkers, Tumor/metabolism , Calorimetry , Multiple Myeloma/metabolism , Proteomics , Waldenstrom Macroglobulinemia/metabolism , Biomarkers, Tumor/blood , Humans , Immunoglobulins/blood , Multiple Myeloma/blood , Waldenstrom Macroglobulinemia/blood
15.
Biochim Biophys Acta Gen Subj ; 1861(2): 409-417, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27751955

ABSTRACT

BACKGROUND: Biological microcalorimetry has entered into a phase where its potential for disease diagnostics is readily recognized. A wide variety of oncological and immunological disorders have been characterized by differential scanning calorimetry (DSC) and characteristic thermodynamic profiles were reported. Now the challenge before DSC is not the experimental data collection but the development of analysis protocols for reliable data stratification/classification and discrimination of disease specific features (calorimetric markers). METHODS: In this work we apply InterCriteria Analysis (ICA) approach combined with Pearson's and Spearman's correlation analysis to a large dataset of calorimetric and biochemical parameters derived for the serum proteome of patients diagnosed with multiple myeloma (MM). RESULTS: We have identified intercriteria dependences that are general for the various types of MM and thus can be regarded as a characteristic of this largely heterogeneous disease: strong contribution of the monoclonal (M) protein concentration to the excess heat capacity of the immunoglobulins-assigned thermal transition; shift of the albumin assigned calorimetric transition to allocation where it overlaps with the globulins assigned transition and strong shift of the globulins assigned transition temperature attributable to M proteins conformational changes. CONCLUSIONS: Our data justify the applicability of ICA for deciphering of the complex thermodynamic behavior of the MM blood serum proteome. GENERAL SIGNIFICANCE: The applied approach is suitable for more general application in the analysis of biocalorimetric data since it can help identify the biological relevance of the distinguished thermodynamic features observed for variety of diseases.


Subject(s)
Proteome/metabolism , Serum/metabolism , Albumins/metabolism , Biomarkers/blood , Biomarkers/metabolism , Calorimetry, Differential Scanning/methods , Globulins/metabolism , Hot Temperature , Humans , Immunoglobulins/metabolism , Multiple Myeloma/blood , Multiple Myeloma/metabolism , Myeloma Proteins/metabolism , Transition Temperature
16.
Biophys J ; 108(4): 844-853, 2015 Feb 17.
Article in English | MEDLINE | ID: mdl-25692589

ABSTRACT

Protonation of the lumen-exposed residues of some photosynthetic complexes in the grana membranes occurs under conditions of high light intensity and triggers a major photoprotection mechanism known as energy dependent nonphotochemical quenching. We have studied the role of protonation in the structural reorganization and thermal stability of isolated grana membranes. The macroorganization of granal membrane fragments in protonated and partly deprotonated state has been mapped by means of atomic force microscopy. The protonation of the photosynthetic complexes has been found to induce large-scale structural remodeling of grana membranes-formation of extensive domains of the major light-harvesting complex of photosystem II and clustering of trimmed photosystem II supercomplexes, thinning of the membrane, and reduction of its size. These events are accompanied by pronounced thermal destabilization of the photosynthetic complexes, as evidenced by circular dichroism spectroscopy and differential scanning calorimetry. Our data reveal a detailed nanoscopic picture of the initial steps of nonphotochemical quenching.


Subject(s)
Photosystem II Protein Complex/chemistry , Thylakoids/chemistry , Enzyme Stability , Hot Temperature , Hydrogen-Ion Concentration , Pisum sativum/chemistry , Pisum sativum/enzymology , Pisum sativum/ultrastructure , Protein Denaturation , Thylakoids/enzymology
17.
Langmuir ; 31(42): 11583-90, 2015 Oct 27.
Article in English | MEDLINE | ID: mdl-26473578

ABSTRACT

The major light-harvesting pigment-protein complex of photosystem II, LHCII, has a crucial role in the distribution of the light energy between the two photosystems, the efficient light capturing and protection of the reaction centers and antennae from overexcitation. In this work direct structural information on the effect of LHCII protonation, which mimics the switch from light-harvesting to photoprotective state of the protein, was revealed by polarization-modulated infrared reflection-absorption spectroscopy (PM-IRRAS). PM-IRRAS on LHCII monolayers verified that the native helical structure of the protein is preserved in both partly deprotonated (pH 7.8, LHCII) and protonated (pH 5.2, p-LHCII) states. At low surface pressure, 10 mN/m, the orientation of the α-helices in these two LHCII states is different-tilted (θ ≈ 40°) in LHCII and nearly vertical (θ ≈ 90°) in p-LHCII monolayers; the partly deprotonated complex is more hydrophilic than the protonated one and exhibits stronger intertrimer interactions. At higher surface pressure, 30 mN/m, which is typical for biological membranes, the protonation affects neither the secondary structure nor the orientation of the transmembrane α-helices (tilted ∼45° relative to the membrane surface in both LHCII states) but weakens the intermolecular interactions within and/or between the trimers.


Subject(s)
Light-Harvesting Protein Complexes/chemistry , Photosystem II Protein Complex/metabolism , Protein Structure, Secondary , Spectrometry, Fluorescence
18.
Biochim Biophys Acta ; 1830(10): 4564-72, 2013 Oct.
Article in English | MEDLINE | ID: mdl-23747299

ABSTRACT

BACKGROUND: Recently, we have elaborated a thermodynamic theory that could coherently interpret the diverse effects of Hofmeister ions on proteins, based on a single physical parameter, the protein-water interfacial tension (Dér et al., Journal of Physical Chemistry B. 2007, 111, 5344-5350). This theory, implying a "liquid drop model", predicts changes in protein conformational fluctuations upon addition of Hofmeister salts (containing either kosmotropic or chaotropic anions) to the medium. METHODS: Here, we report experimental tests of this prediction using a complex approach by applying methods especially suited for the detection of protein fluctuation changes (neutron scattering, micro-calorimetry, and Fourier-transform infrared spectroscopy). RESULTS: It is demonstrated that Hofmeister salts, via setting the hydrophobic/hydrophilic properties of the protein-water interface, control conformational fluctuations even in the interior of the typical membrane transport protein bacteriorhodopsin, around its temperature-induced, unusual α(II)→α(I) conformational transition between 60 and 90°C. We found that below this transition kosmotropic (COOCH3(-)), while above it chaotropic (ClO4(-)) anions increase structural fluctuations of bR. It was also shown that, in each case, an onset of enhanced equilibrium fluctuations presages this phase transition in the course of the thermotropic response of bR. CONCLUSIONS: These results are in full agreement with the theory, and demonstrate that predictions based on protein-water interfacial tension changes can describe Hofmeister effects and interpret protein dynamics phenomena even in unusual cases. GENERAL SIGNIFICANCE: This approach is expected to provide a useful guide to understand the principles governing the interplay between protein interfacial properties and conformational dynamics, in general.


Subject(s)
Ions , Proteins/chemistry , Calorimetry, Differential Scanning , Neutrons , Scattering, Radiation , Spectroscopy, Fourier Transform Infrared , Thermodynamics
19.
Anal Chem ; 86(24): 12355-61, 2014 Dec 16.
Article in English | MEDLINE | ID: mdl-25478781

ABSTRACT

The present work provides a thermodynamic description of blood serum from patients diagnosed with Bence Jones myeloma (BJMM) and nonsecretory myeloma (NSMM) by means of differential scanning calorimetry (DSC), serum protein electrophoresis, and free light chain assay. Specific alterations in the thermodynamic behavior of both BJMM and NSMM proteome have been revealed. On the basis of the transition temperature of the main transition in the calorimetric profiles and the shape similarity criterion, we defined BJMM and NSMM sets/subsets of thermograms with very similar thermodynamic features. We show that some of the BJMM and NSMM subsets correlate with previously defined secretory myeloma subsets (Todinova et al. Anal. Chem. 2011, 83, 7992). The established analogies strongly suggest that common molecular markers contribute to the calorimetric profiles of the different, secretory and nonsecretory, myeloma types; our data show robust evidence that these are ligands stabilizing the major serum proteins. We demonstrate that the DSC approach might be highly beneficial, especially for NSMM patients, since the characteristic modifications in the DSC profiles might serve as calorimetric markers when no monoclonal proteins can be detected in the bloodstream and the diagnosis heavily relies on invasive methods.


Subject(s)
Bence Jones Protein/metabolism , Biomarkers , Calorimetry/methods , Multiple Myeloma/metabolism , Neoplasm Proteins/metabolism , Calorimetry, Differential Scanning , Humans
20.
Biochim Biophys Acta ; 1820(12): 1879-85, 2012 Dec.
Article in English | MEDLINE | ID: mdl-22903026

ABSTRACT

BACKGROUND: Differential scanning calorimetry (DSC), a highly sensitive technique for resolving thermally-induced protein folding/unfolding transitions, recently was recognized as a novel tool for disease diagnosis and monitoring. To further elaborate this approach we have applied DSC in a study of blood plasma from patients with colorectal cancer (CRC) at different stages of tumor development and localization. METHODS: Blood plasma from patients diagnosed with CRC was analyzed by DSC. The CRC thermograms were compared to those of healthy individuals and patients with gastric cancer and non-cancerous soft tissue inflammation. The thermodynamic parameters: excess heat capacity and enthalpy of the transitions corresponding to the most abundant plasma proteins, as well as transition and first moment temperatures were determined from the calorimetric profiles. RESULTS: The calorimetric profiles of blood plasma from CRC patients are found to be distinct from those of healthy individuals and those of patients with soft tissue, non-cancerous inflammation. Generally the CRC thermograms exhibit reduced heat capacity of the major albumin/globulin-assigned thermal transitions, lower enthalpy and a featureless high temperature region compared to healthy individuals. CONCLUSIONS: A classification of blood plasma proteome from patients with colorectal cancer (CRC1, CRC2 and CRC3 groups, and subgroups within each group CRC1(1-2), CRC2(1-2) and CRC3(1-2)) is proposed based on the derived thermodynamic parameters. GENERAL SIGNIFICANCE: The presented data demonstrate a proof of principle and confirm that the DSC technique has a potential to monitor changes in the CRC blood plasma proteome. This study is a further step toward the validation of calorimetry as a diagnostic tool.


Subject(s)
Biomarkers, Tumor/blood , Blood Proteins/metabolism , Calorimetry, Differential Scanning , Colorectal Neoplasms/diagnosis , Inflammation/diagnosis , Plasma/metabolism , Proteome/analysis , Adult , Aged , Aged, 80 and over , Case-Control Studies , Colon/metabolism , Colorectal Neoplasms/blood , Colorectal Neoplasms/classification , Female , Humans , Inflammation/blood , Male , Middle Aged , Neoplasm Staging , Rectum/metabolism , Thermodynamics
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