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1.
Sci Rep ; 14(1): 9685, 2024 04 27.
Article in English | MEDLINE | ID: mdl-38678061

ABSTRACT

This study aimed to assess the association between the oral microbiome, age, and frailty. Data and saliva samples were obtained from male and female participants aged 35-70 years (n = 1357). Saliva samples were analysed by 16S rRNA gene sequencing and differences in microbial diversity and community compositions were examined in relation to chronological age and the frailty index (FI). Most alpha diversity measures (Richness, Shannon Diversity, Faith's Phylogenetic Diversity) showed an inverse association with frailty, whereas a positive association was observed with age and Shannon Diversity and Evenness. A further sex-stratified analysis revealed differences in measures of microbial diversity and composition. Multiple genera were detected as significantly differentially abundant with increasing frailty and age by at least two methods. With age, the relative abundance of Veillonella was reduced in both males and females, whereas increases in Corynebacterium appeared specific to males and Aggregatibacter, Fusobacterium, Neisseria, Stomatobaculum, and Porphyromonas specific to females. Beta diversity was significantly associated with multiple mental health components of the FI. This study shows age and frailty are differentially associated with measures of microbial diversity and composition, suggesting the oral microbiome may be a useful indicator of increased risk of frailty or a potential target for improving health in ageing adults.


Subject(s)
Frailty , Microbiota , Mouth , RNA, Ribosomal, 16S , Saliva , Humans , Middle Aged , Female , Male , Aged , Adult , Frailty/microbiology , Canada , RNA, Ribosomal, 16S/genetics , Mouth/microbiology , Saliva/microbiology , Bacteria/genetics , Bacteria/classification , Bacteria/isolation & purification , Aging , Age Factors
2.
Sci Adv ; 10(31): eadn1476, 2024 Aug 02.
Article in English | MEDLINE | ID: mdl-39083619

ABSTRACT

The high diversity and global distribution of heterotrophic bacterial diazotrophs (HBDs) in the ocean has recently become apparent. However, understanding the role these largely uncultured microorganisms play in marine N2 fixation poses a challenge due to their undefined growth requirements and the complex regulation of the nitrogenase enzyme. We isolated and characterized Candidatus Thalassolituus haligoni, a member of a widely distributed clade of HBD belonging to the Oceanospirillales. Analysis of its nifH gene via amplicon sequencing revealed the extensive distribution of Cand. T. haligoni across the Pacific, Atlantic, and Arctic Oceans. Pangenome analysis indicates that the isolate shares >99% identity with an uncultured metagenome-assembled genome called Arc-Gamma-03, recently recovered from the Arctic Ocean. Through combined genomic, proteomic, and physiological approaches, we confirmed that the isolate fixes N2 gas. However, the mechanisms governing nitrogenase regulation in Cand. T. haligoni remain unclear. We propose Cand. T. haligoni as a globally distributed, cultured HBD model species within this understudied clade of Oceanospirillales.


Subject(s)
Gammaproteobacteria , Nitrogen Fixation , Phylogeny , Gammaproteobacteria/genetics , Gammaproteobacteria/metabolism , Gammaproteobacteria/isolation & purification , Gammaproteobacteria/enzymology , Gammaproteobacteria/classification , Nitrogenase/metabolism , Nitrogenase/genetics , Seawater/microbiology , Metagenome , Oxidoreductases
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