Search details
1.
Polyphosphate kinase regulates LPS structure and polymyxin resistance during starvation in E. coli.
PLoS Biol
; 22(3): e3002558, 2024 Mar.
Article
in English
| MEDLINE | ID: mdl-38478588
2.
METAbolomics data Balancing with Over-sampling Algorithms (META-BOA): an online resource for addressing class imbalance.
Bioinformatics
; 38(23): 5326-5327, 2022 11 30.
Article
in English
| MEDLINE | ID: mdl-36222566
3.
Proteomics characterization of mitochondrial-derived vesicles under oxidative stress.
FASEB J
; 35(4): e21278, 2021 04.
Article
in English
| MEDLINE | ID: mdl-33769614
4.
PIGNON: a protein-protein interaction-guided functional enrichment analysis for quantitative proteomics.
BMC Bioinformatics
; 22(1): 302, 2021 Jun 04.
Article
in English
| MEDLINE | ID: mdl-34088263
5.
Proximity Interactome Map of the Vac14-Fig4 Complex Using BioID.
J Proteome Res
; 20(11): 4959-4973, 2021 11 05.
Article
in English
| MEDLINE | ID: mdl-34554760
6.
pepFunk: a tool for peptide-centric functional analysis of metaproteomic human gut microbiome studies.
Bioinformatics
; 36(14): 4171-4179, 2020 08 15.
Article
in English
| MEDLINE | ID: mdl-32369596
7.
∆F508 CFTR interactome remodelling promotes rescue of cystic fibrosis.
Nature
; 528(7583): 510-6, 2015 Dec 24.
Article
in English
| MEDLINE | ID: mdl-26618866
8.
Computational Identification of Human Biological Processes and Protein Sequence Motifs Putatively Targeted by SARS-CoV-2 Proteins Using Protein-Protein Interaction Networks.
J Proteome Res
; 19(11): 4553-4566, 2020 11 06.
Article
in English
| MEDLINE | ID: mdl-33103435
9.
Studying the Temporal Dynamics of the Gut Microbiota Using Metabolic Stable Isotope Labeling and Metaproteomics.
Anal Chem
; 92(24): 15711-15718, 2020 12 15.
Article
in English
| MEDLINE | ID: mdl-33253538
10.
Proteomics INTegrator (PINT): An Online Tool To Store, Query, and Visualize Large Proteomics Experiment Results.
J Proteome Res
; 18(8): 2999-3008, 2019 08 02.
Article
in English
| MEDLINE | ID: mdl-31260318
11.
Comparison of CRISPR Genomic Tagging for Affinity Purification and Endogenous Immunoprecipitation Coupled with Quantitative Mass Spectrometry To Identify the Dynamic AMPKα2 Interactome.
J Proteome Res
; 18(10): 3703-3714, 2019 10 04.
Article
in English
| MEDLINE | ID: mdl-31398040
12.
Quantitative Analysis of the Proteome Response to the Histone Deacetylase Inhibitor (HDACi) Vorinostat in Niemann-Pick Type C1 disease.
Mol Cell Proteomics
; 16(11): 1938-1957, 2017 11.
Article
in English
| MEDLINE | ID: mdl-28860124
13.
Functional 5' UTR motif discovery with LESMoN: Local Enrichment of Sequence Motifs in biological Networks.
Nucleic Acids Res
; 45(18): 10415-10427, 2017 Oct 13.
Article
in English
| MEDLINE | ID: mdl-28977652
14.
Quantitative Proteomics of Human Fibroblasts with I1061T Mutation in Niemann-Pick C1 (NPC1) Protein Provides Insights into the Disease Pathogenesis.
Mol Cell Proteomics
; 14(7): 1734-49, 2015 Jul.
Article
in English
| MEDLINE | ID: mdl-25873482
15.
Physiological and Molecular Alterations Promoted by Schizotetranychus oryzae Mite Infestation in Rice Leaves.
J Proteome Res
; 15(2): 431-46, 2016 Feb 05.
Article
in English
| MEDLINE | ID: mdl-26667653
16.
Curation of the Mammalian Palmitoylome Indicates a Pivotal Role for Palmitoylation in Diseases and Disorders of the Nervous System and Cancers.
PLoS Comput Biol
; 11(8): e1004405, 2015 Aug.
Article
in English
| MEDLINE | ID: mdl-26275289
17.
A newly uncovered group of distantly related lysine methyltransferases preferentially interact with molecular chaperones to regulate their activity.
PLoS Genet
; 9(1): e1003210, 2013.
Article
in English
| MEDLINE | ID: mdl-23349634
18.
Nuclear import of RNA polymerase II is coupled with nucleocytoplasmic shuttling of the RNA polymerase II-associated protein 2.
Nucleic Acids Res
; 41(14): 6881-91, 2013 Aug.
Article
in English
| MEDLINE | ID: mdl-23723243
19.
PSEA-Quant: a protein set enrichment analysis on label-free and label-based protein quantification data.
J Proteome Res
; 13(12): 5496-509, 2014 Dec 05.
Article
in English
| MEDLINE | ID: mdl-25177766
20.
Sheathless capillary electrophoresis-tandem mass spectrometry for top-down characterization of Pyrococcus furiosus proteins on a proteome scale.
Anal Chem
; 86(22): 11006-12, 2014 Nov 18.
Article
in English
| MEDLINE | ID: mdl-25346219