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1.
Cell ; 178(1): 152-159.e11, 2019 06 27.
Article in English | MEDLINE | ID: mdl-31178121

ABSTRACT

Intrinsic and acquired drug resistance and induction of secondary malignancies limit successful chemotherapy. Because mutagenic translesion synthesis (TLS) contributes to chemoresistance as well as treatment-induced mutations, targeting TLS is an attractive avenue for improving chemotherapeutics. However, development of small molecules with high specificity and in vivo efficacy for mutagenic TLS has been challenging. Here, we report the discovery of a small-molecule inhibitor, JH-RE-06, that disrupts mutagenic TLS by preventing recruitment of mutagenic POL ζ. Remarkably, JH-RE-06 targets a nearly featureless surface of REV1 that interacts with the REV7 subunit of POL ζ. Binding of JH-RE-06 induces REV1 dimerization, which blocks the REV1-REV7 interaction and POL ζ recruitment. JH-RE-06 inhibits mutagenic TLS and enhances cisplatin-induced toxicity in cultured human and mouse cell lines. Co-administration of JH-RE-06 with cisplatin suppresses the growth of xenograft human melanomas in mice, establishing a framework for developing TLS inhibitors as a novel class of chemotherapy adjuvants.


Subject(s)
Antineoplastic Agents/therapeutic use , Cisplatin/therapeutic use , Mutagenesis/drug effects , Neoplasms/drug therapy , Quinolines/therapeutic use , Animals , Antineoplastic Agents/pharmacology , Cell Line, Tumor , Cell Survival/drug effects , Cisplatin/adverse effects , Cisplatin/pharmacology , DNA Damage/drug effects , DNA-Directed DNA Polymerase , Female , Gene Knockdown Techniques , Humans , Mad2 Proteins/metabolism , Mice , Mice, Nude , Mice, Transgenic , Neoplasms/metabolism , Neoplasms/pathology , Nucleotidyltransferases/antagonists & inhibitors , Nucleotidyltransferases/chemistry , Nucleotidyltransferases/genetics , Nucleotidyltransferases/metabolism , Quinolines/chemistry , Quinolines/pharmacology , Transfection , Tumor Burden/drug effects , Xenograft Model Antitumor Assays
2.
PLoS Pathog ; 19(1): e1011078, 2023 01.
Article in English | MEDLINE | ID: mdl-36696451

ABSTRACT

Distinct viral gene expression characterizes Epstein-Barr virus (EBV) infection in EBV-producing marmoset B-cell (B95-8) and EBV-associated gastric carcinoma (SNU719) cell lines. CCCTC-binding factor (CTCF) is a structural chromatin factor that coordinates chromatin interactions in the EBV genome. Chromatin immunoprecipitation followed by sequencing against CTCF revealed 16 CTCF binding sites in the B95-8 and SNU719 EBV genomes. The biological function of one CTCF binding site (S13 locus) located on the BamHI A right transcript (BART) miRNA promoter was elucidated experimentally. Microscale thermophoresis assay showed that CTCF binds more readily to the stable form than the mutant form of the S13 locus. EBV BART miRNA clusters encode 22 miRNAs, whose roles are implicated in EBV-related cancer pathogenesis. The B95-8 EBV genome lacks a 11.8-kb EcoRI C fragment, whereas the SNU719 EBV genome is full-length. ChIP-PCR assay revealed that CTCF, RNA polymerase II, H3K4me3 histone, and H3K9me3 histone were more enriched at S13 and S16 (167-kb) loci in B95-8 than in the SNU719 EBV genome. 4C-Seq and 3C-PCR assays using B95-8 and SNU719 cells showed that the S13 locus was associated with overall EBV genomic loci including 3-kb and 167-kb region in both EBV genomes. We generated mutations in the S13 locus in bacmids with or without the 11.8-kb BART transcript unit (BART(+/-)). The S13 mutation upregulated BART miRNA expression, weakened EBV latency, and reduced EBV infectivity in the presence of EcoRI C fragment. Another 3C-PCR assay using four types of BART(+/-)·S13(wild-type(Wt)/mutant(Mt)) HEK293-EBV cells revealed that the S13 mutation decreased DNA associations between the 167-kb region and 3-kb in the EBV genome. Based on these results, CTCF bound to the S13 locus along with the 11.8-kb EcoRI C fragment is suggested to form an EBV 3-dimensional DNA loop for coordinated EBV BART miRNA expression and infectivity.


Subject(s)
Epstein-Barr Virus Infections , Latent Infection , MicroRNAs , Humans , Epstein-Barr Virus Infections/genetics , CCCTC-Binding Factor/genetics , Herpesvirus 4, Human/genetics , Histones/genetics , HEK293 Cells , MicroRNAs/genetics , Chromatin , Binding Sites
3.
Brain ; 145(2): 517-530, 2022 04 18.
Article in English | MEDLINE | ID: mdl-35313351

ABSTRACT

This prospective study determined the use of intracranially recorded spectral responses during naming tasks in predicting neuropsychological performance following epilepsy surgery. We recruited 65 patients with drug-resistant focal epilepsy who underwent preoperative neuropsychological assessment and intracranial EEG recording. The Clinical Evaluation of Language Fundamentals evaluated the baseline and postoperative language function. During extra-operative intracranial EEG recording, we assigned patients to undergo auditory and picture naming tasks. Time-frequency analysis determined the spatiotemporal characteristics of naming-related amplitude modulations, including high gamma augmentation at 70-110 Hz. We surgically removed the presumed epileptogenic zone based on the intracranial EEG and MRI abnormalities while maximally preserving the eloquent areas defined by electrical stimulation mapping. The multivariate regression model incorporating auditory naming-related high gamma augmentation predicted the postoperative changes in Core Language Score with r2 of 0.37 and in Expressive Language Index with r2 of 0.32. Independently of the effects of epilepsy and neuroimaging profiles, higher high gamma augmentation at the resected language-dominant hemispheric area predicted a more severe postoperative decline in Core Language Score and Expressive Language Index. Conversely, the model incorporating picture naming-related high gamma augmentation predicted the change in Receptive Language Index with an r2 of 0.50. Higher high gamma augmentation independently predicted a more severe postoperative decline in Receptive Language Index. Ancillary regression analysis indicated that naming-related low gamma augmentation and alpha/beta attenuation likewise independently predicted a more severe Core Language Score decline. The machine learning-based prediction model suggested that naming-related high gamma augmentation, among all spectral responses used as predictors, most strongly contributed to the improved prediction of patients showing a >5-point Core Language Score decline (reflecting the lower 25th percentile among patients). We generated the model-based atlas visualizing sites, which, if resected, would lead to such a language decline. With a 5-fold cross-validation procedure, the auditory naming-based model predicted patients who had such a postoperative language decline with an accuracy of 0.80. The model indicated that virtual resection of an electrical stimulation mapping-defined language site would have increased the relative risk of the Core Language Score decline by 5.28 (95% confidence interval: 3.47-8.02). Especially, that of an electrical stimulation mapping-defined receptive language site would have maximized it to 15.90 (95% confidence interval: 9.59-26.33). In summary, naming-related spectral responses predict neuropsychological outcomes after epilepsy surgery. We have provided our prediction model as an open-source material, which will indicate the postoperative language function of future patients and facilitate external validation at tertiary epilepsy centres.


Subject(s)
Drug Resistant Epilepsy , Epilepsy , Postoperative Cognitive Complications , Brain Mapping/methods , Drug Resistant Epilepsy/surgery , Electrocorticography/methods , Epilepsy/surgery , Humans , Prospective Studies
4.
Mar Drugs ; 21(12)2023 Nov 25.
Article in English | MEDLINE | ID: mdl-38132929

ABSTRACT

The objective of this study was to investigate the effect of low-molecular-weight fish collagen (valine-glycine-proline-hydroxyproline-glycine-proline-alanine-glycine; LMWCP) on H2O2- or LPS-treated primary chondrocytes and monoiodoacetate (MIA)-induced osteoarthritis rat models. Our findings indicated that LMWCP treatment exhibited protective effects by preventing chondrocyte death and reducing matrix degradation in both H2O2-treated primary chondrocytes and cartilage tissue from MIA-induced osteoarthritis rats. This was achieved by increasing the levels of aggrecan, collagen type I, collagen type II, TIMP-1, and TIMP-3, while simultaneously decreasing catabolic factors such as phosphorylation of Smad, MMP-3, and MMP-13. Additionally, LMWCP treatment effectively suppressed the activation of inflammation and apoptosis pathways in both LPS-treated primary chondrocytes and cartilage tissue from MIA-induced osteoarthritis rats. These results suggest that LMWCP supplementation ameliorates the progression of osteoarthritis through its direct impact on inflammation and apoptosis in chondrocytes.


Subject(s)
Cartilage, Articular , Osteoarthritis , Rats , Animals , Chondrocytes , Hydroxyproline/adverse effects , Hydroxyproline/metabolism , Glycine/pharmacology , Hydrogen Peroxide/pharmacology , Lipopolysaccharides/pharmacology , Osteoarthritis/chemically induced , Osteoarthritis/drug therapy , Osteoarthritis/prevention & control , Inflammation/metabolism , Collagen Type II/pharmacology , Peptides/pharmacology , Valine/adverse effects , Valine/metabolism , Cells, Cultured
5.
Proc Natl Acad Sci U S A ; 117(8): 4109-4116, 2020 02 25.
Article in English | MEDLINE | ID: mdl-32041866

ABSTRACT

The UDP-2,3-diacylglucosamine pyrophosphate hydrolase LpxH is an essential lipid A biosynthetic enzyme that is conserved in the majority of gram-negative bacteria. It has emerged as an attractive novel antibiotic target due to the recent discovery of an LpxH-targeting sulfonyl piperazine compound (referred to as AZ1) by AstraZeneca. However, the molecular details of AZ1 inhibition have remained unresolved, stymieing further development of this class of antibiotics. Here we report the crystal structure of Klebsiella pneumoniae LpxH in complex with AZ1. We show that AZ1 fits snugly into the L-shaped acyl chain-binding chamber of LpxH with its indoline ring situating adjacent to the active site, its sulfonyl group adopting a sharp kink, and its N-CF3-phenyl substituted piperazine group reaching out to the far side of the LpxH acyl chain-binding chamber. Intriguingly, despite the observation of a single AZ1 conformation in the crystal structure, our solution NMR investigation has revealed the presence of a second ligand conformation invisible in the crystalline state. Together, these distinct ligand conformations delineate a cryptic inhibitor envelope that expands the observed footprint of AZ1 in the LpxH-bound crystal structure and enables the design of AZ1 analogs with enhanced potency in enzymatic assays. These designed compounds display striking improvement in antibiotic activity over AZ1 against wild-type K. pneumoniae, and coadministration with outer membrane permeability enhancers profoundly sensitizes Escherichia coli to designed LpxH inhibitors. Remarkably, none of the sulfonyl piperazine compounds occupies the active site of LpxH, foretelling a straightforward path for rapid optimization of this class of antibiotics.


Subject(s)
Acyltransferases/antagonists & inhibitors , Acyltransferases/metabolism , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/pharmacology , Bacterial Proteins/antagonists & inhibitors , Bacterial Proteins/metabolism , Pyrophosphatases/antagonists & inhibitors , Pyrophosphatases/metabolism , Acyltransferases/genetics , Bacterial Proteins/genetics , Escherichia coli/drug effects , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression Regulation, Bacterial/drug effects , Klebsiella pneumoniae/drug effects , Klebsiella pneumoniae/genetics , Klebsiella pneumoniae/metabolism , Lipid Metabolism , Microbial Sensitivity Tests , Mutation , Piperazines/chemistry , Piperazines/pharmacology , Protein Conformation , Pyrophosphatases/genetics
6.
BMC Emerg Med ; 23(1): 15, 2023 02 10.
Article in English | MEDLINE | ID: mdl-36765283

ABSTRACT

BACKGROUND: Since 2014, Korea has been operating the National Emergency Medical Situation Room (NEMSR) to provide regional emergency departments (EDs) with coordination services for the interhospital transfer of critically ill patients. The present study aimed to describe the NEMSR's experience and interhospital transfer pattern from EDs nationwide, and investigate the factors related to delayed transfers or transfers that could not be arranged by the NEMSR. METHODS: This study was a retrospective cross-sectional analysis of the NEMSR's coordination registry from 2017 to 2019. The demographic and hospital characteristics related to emergency transfers were analyzed with hierarchical logistic models. RESULTS: The NEMSR received a total of 14,003 requests for the arrangement of the interhospital transfers of critically ill patients from 2017 to 2019. Of 10,222 requests included in the analysis, 8297 (81.17%) successful transfers were coordinated by the NEMSR. Transfers were requested mainly due to a shortage of medical staff (59.79%) and ICU beds (30.80%). Delayed transfers were significantly associated with insufficient hospital resources. The larger the bed capacity of the sending hospital, the more difficult it was to coordinate the transfer (odds ratio [OR] for transfer not arranged = 2.04; 95% confidence interval [CI]: 1.48-2.82, ≥ 1000 beds vs. < 300 beds) and the longer the transfer was delayed (OR for delays of more than 44 minutes = 2.08; 95% CI: 1.57-2.76, ≥ 1000 beds vs. < 300 beds). CONCLUSIONS: The operation of the NEMSR has clinical importance in that it could efficiently coordinate interhospital transfers through a protocolized process and resource information system. The coordination role is significant as information technology in emergency care develops while regional gaps in the distribution of medical resources widen.


Subject(s)
Critical Illness , Patient Transfer , Humans , Retrospective Studies , Cross-Sectional Studies , Critical Illness/therapy , Emergency Service, Hospital , Republic of Korea
7.
Neuroimage ; 258: 119342, 2022 09.
Article in English | MEDLINE | ID: mdl-35654375

ABSTRACT

PURPOSE: A prominent view of language acquisition involves learning to ignore irrelevant auditory signals through functional reorganization, enabling more efficient processing of relevant information. Yet, few studies have characterized the neural spatiotemporal dynamics supporting rapid detection and subsequent disregard of irrelevant auditory information, in the developing brain. To address this unknown, the present study modeled the developmental acquisition of cost-efficient neural dynamics for auditory processing, using intracranial electrocorticographic responses measured in individuals receiving standard-of-care treatment for drug-resistant, focal epilepsy. We also provided evidence demonstrating the maturation of an anterior-to-posterior functional division within the superior-temporal gyrus (STG), which is known to exist in the adult STG. METHODS: We studied 32 patients undergoing extraoperative electrocorticography (age range: eight months to 28 years) and analyzed 2,039 intracranial electrode sites outside the seizure onset zone, interictal spike-generating areas, and MRI lesions. Patients were given forward (normal) speech sounds, backward-played speech sounds, and signal-correlated noises during a task-free condition. We then quantified sound processing-related neural costs at given time windows using high-gamma amplitude at 70-110 Hz and animated the group-level high-gamma dynamics on a spatially normalized three-dimensional brain surface. Finally, we determined if age independently contributed to high-gamma dynamics across brain regions and time windows. RESULTS: Group-level analysis of noise-related neural costs in the STG revealed developmental enhancement of early high-gamma augmentation and diminution of delayed augmentation. Analysis of speech-related high-gamma activity demonstrated an anterior-to-posterior functional parcellation in the STG. The left anterior STG showed sustained augmentation throughout stimulus presentation, whereas the left posterior STG showed transient augmentation after stimulus onset. We found a double dissociation between the locations and developmental changes in speech sound-related high-gamma dynamics. Early left anterior STG high-gamma augmentation (i.e., within 200 ms post-stimulus onset) showed developmental enhancement, whereas delayed left posterior STG high-gamma augmentation declined with development. CONCLUSIONS: Our observations support the model that, with age, the human STG refines neural dynamics to rapidly detect and subsequently disregard uninformative acoustic noises. Our study also supports the notion that the anterior-to-posterior functional division within the left STG is gradually strengthened for efficient speech-sound perception after birth.


Subject(s)
Auditory Cortex , Drug Resistant Epilepsy , Speech Perception , Acoustic Stimulation/methods , Adult , Auditory Cortex/diagnostic imaging , Auditory Perception/physiology , Brain/physiology , Brain Mapping/methods , Drug Resistant Epilepsy/diagnostic imaging , Drug Resistant Epilepsy/surgery , Electrocorticography/methods , Humans , Infant , Language
8.
Epilepsia ; 63(7): 1787-1798, 2022 07.
Article in English | MEDLINE | ID: mdl-35388455

ABSTRACT

OBJECTIVE: To determine the structural networks that constrain propagation of ictal oscillations during epileptic spasm events, and compare the observed propagation patterns across patients with successful or unsuccessful surgical outcomes. METHODS: Subdural electrode recordings of 18 young patients (age 1-11 years) were analyzed during epileptic spasm events to determine ictal networks and quantify the amplitude and onset time of ictal oscillations across the cortical surface. Corresponding structural networks were generated with diffusion magnetic resonance imaging (MRI) tractography by seeding the cortical region associated with the earliest average oscillation onset time, and white matter pathways connecting active electrode regions within the ictal network were isolated. Properties of this structural network were used to predict oscillation onset times and amplitudes, and this relationship was compared across patients who did and did not achieve seizure freedom following resective surgery. RESULTS: Onset propagation patterns were relatively consistent across each patient's spasm events. An electrode's average ictal oscillation onset latency was most significantly associated with the length of direct corticocortical tracts connecting to the area with the earliest average oscillation onset (p < .001, model R2  = .54). Moreover, patients demonstrating a faster propagation of ictal oscillation signals within the corticocortical network were more likely to have seizure recurrence following resective surgery (p = .039). In addition, ictal oscillation amplitude was associated with connecting tractography length and weighted fractional anisotropy (FA) measures along these pathways (p = .002/.030, model R2  = .31/.25). Characteristics of analogous corticothalamic pathways did not show significant associations with ictal oscillation onset latency or amplitude. SIGNIFICANCE: Spatiotemporal propagation patterns of high-frequency activity in epileptic spasms align with length and FA measures from onset-originating corticocortical pathways. Considering the data in this individualized framework may help inform surgical decision-making and expectations of surgical outcomes.


Subject(s)
Electroencephalography , Spasms, Infantile , Child , Child, Preschool , Diffusion Tensor Imaging , Electroencephalography/methods , Humans , Infant , Seizures/surgery , Spasm , Spasms, Infantile/diagnostic imaging , Spasms, Infantile/surgery
9.
Pediatr Res ; 91(6): 1505-1515, 2022 05.
Article in English | MEDLINE | ID: mdl-33966055

ABSTRACT

BACKGROUND: Better biomarkers of eventual outcome are needed for neonatal encephalopathy. To identify the most potent neonatal imaging marker associated with 2-year outcomes, we retrospectively performed diffusion-weighted imaging connectome (DWIC) and fixel-based analysis (FBA) on magnetic resonance imaging (MRI) obtained in the first 4 weeks of life in term neonatal encephalopathy newborns. METHODS: Diffusion tractography was available in 15 out of 24 babies with MRI, five each with normal, abnormal motor outcome, or death. All 15 except one underwent hypothermia as initial treatment. In abnormal motor and death groups, DWIC found 19 white matter pathways with severely disrupted fiber orientation distributions. RESULTS: Using random forest classification, these disruptions predicted the follow-up outcomes with 89-99% accuracy. These pathways showed reduced integrity in abnormal motor and death vs. normal tone groups (p < 10-6). Using ranked supervised multi-view canonical correlation and depicting just three of the five dimensions of the analysis, the abnormal motor and death were clearly differentiated from each other and the normal tone group. CONCLUSIONS: This study suggests that a machine-learning model for prediction using early DWIC and FBA could be a possible way of developing biomarkers in large MRI datasets having clinical outcomes. IMPACT: Early connectome and FBA of clinically acquired DWI provide a new noninvasive imaging tool to predict the long-term motor outcomes after birth, based on the severity of white matter injury. Disrupted white matter connectivity as a novel neonatal marker achieves high accuracy of 89-99% to predict 2-year motor outcomes using conventional machine-learning classification. The proposed neonatal marker may allow better prognostication that is important to elucidate neural repair mechanisms and evaluate treatment modalities in neonatal encephalopathy.


Subject(s)
Brain Injuries , Connectome , Infant, Newborn, Diseases , Biomarkers , Brain/diagnostic imaging , Brain/pathology , Brain Injuries/pathology , Connectome/methods , Diffusion Magnetic Resonance Imaging/methods , Humans , Infant, Newborn , Infant, Newborn, Diseases/pathology , Retrospective Studies
10.
Mar Drugs ; 20(11)2022 Oct 30.
Article in English | MEDLINE | ID: mdl-36355008

ABSTRACT

For this research article, we investigated the protective effects of enzyme-treated caviar powder extract (CV) in ultraviolet B (UVB)-irradiated hairless mice and keratinocytes by confirming moisturizing-related factors and elasticity-related factors. UVB irradiation induced wrinkle formation, dehydration, oxidative stress, and inflammation in the dorsal skin of mice; however, these were suppressed in the CV-supplemented groups in UVB-irradiated hairless mice. Furthermore, in UVB-irradiated keratinocytes, CV treatment increased the antioxidant enzyme activities and the levels of sphingomyelin and hyaluronic acid and decreased the production of pro-inflammatory cytokines and the expression of IkB-α and p65 phosphorylation. These findings indicate that CV can directly protect keratinocytes against UVB irradiation-induced oxidative stress and inflammation. Therefore, we suggest that CV can protect against UVB-induced skin photoaging. Therefore, we suggest that caviar is effective for skin health by preventing UVB-induced skin photoaging.


Subject(s)
Skin Aging , Mice , Animals , Mice, Hairless , Ultraviolet Rays/adverse effects , Keratinocytes , Skin/radiation effects , Antioxidants/pharmacology , Antioxidants/metabolism , Inflammation/metabolism
11.
Hum Brain Mapp ; 42(10): 3326-3338, 2021 07.
Article in English | MEDLINE | ID: mdl-33949048

ABSTRACT

This study investigated whether current state-of-the-art deep reasoning network analysis on psychometry-driven diffusion tractography connectome can accurately predict expressive and receptive language scores in a cohort of young children with persistent language concerns (n = 31, age: 4.25 ± 2.38 years). A dilated convolutional neural network combined with a relational network (dilated CNN + RN) was trained to reason the nonlinear relationship between "dilated CNN features of language network" and "clinically acquired language score". Three-fold cross-validation was then used to compare the Pearson correlation and mean absolute error (MAE) between dilated CNN + RN-predicted and actual language scores. The dilated CNN + RN outperformed other methods providing the most significant correlation between predicted and actual scores (i.e., Pearson's R/p-value: 1.00/<.001 and .99/<.001 for expressive and receptive language scores, respectively) and yielding MAE: 0.28 and 0.28 for the same scores. The strength of the relationship suggests elevated probability in the prediction of both expressive and receptive language scores (i.e., 1.00 and 1.00, respectively). Specifically, sparse connectivity not only within the right precentral gyrus but also involving the right caudate had the strongest relationship between deficit in both the expressive and receptive language domains. Subsequent subgroup analyses inferred that the effectiveness of the dilated CNN + RN-based prediction of language score(s) was independent of time interval (between MRI and language assessment) and age of MRI, suggesting that the dilated CNN + RN using psychometry-driven diffusion tractography connectome may be useful for prediction of the presence of language disorder, and possibly provide a better understanding of the neurological mechanisms of language deficits in young children.


Subject(s)
Cerebral Cortex/diagnostic imaging , Deep Learning , Diffusion Tensor Imaging , Language Disorders/diagnostic imaging , Nerve Net/diagnostic imaging , Adolescent , Cerebral Cortex/pathology , Child , Child, Preschool , Female , Humans , Infant , Language Disorders/pathology , Language Disorders/physiopathology , Male , Nerve Net/pathology , Psychometrics
12.
Epilepsy Behav ; 117: 107909, 2021 04.
Article in English | MEDLINE | ID: mdl-33740493

ABSTRACT

PURPOSE: Focal epilepsy is a risk factor for language impairment in children. We investigated whether the current state-of-the-art deep learning network on diffusion tractography connectome can accurately predict expressive and receptive language scores of children with epilepsy. METHODS: We studied 37 children with a diagnosis of drug-resistant focal epilepsy (age: 11.8 ±â€¯3.1 years) using 3 T MRI and diffusion tractography connectome: G = (S, Ω), where S is an adjacency matrix of edges representing the connectivity strength (number of white-matter tract streamlines) between each pair of brain regions, and Ω reflects a set of brain regions. A convolutional neural network (CNN) was trained to learn the nonlinear relationship between 'S (input)' and 'language score (output)'. Repeated hold-out validation was then employed to measure the Pearson correlation and mean absolute error (MAE) between CNN-predicted and actual language scores. RESULTS: We found that CNN-predicted and actual scores were significantly correlated (i.e., Pearson's R/p-value: 0.82/<0.001 and 0.75/<0.001), yielding MAE: 7.77 and 7.40 for expressive and receptive scores, respectively. Specifically, sparse connectivity not only within the left cortico-cortical network but also involving the right subcortical structures was predictive of language impairment of expressive or receptive domain. Subsequent subgroup analyses inferred that the effectiveness of diffusion tractography-based prediction of language outcome was independent of clinical variables. Intrinsic diffusion tractography connectome properties may be useful for predicting the severity of baseline language dysfunction and possibly provide a better understanding of the biological mechanisms of epilepsy-related language impairment in children.


Subject(s)
Connectome , Deep Learning , Epilepsies, Partial , White Matter , Adolescent , Brain/diagnostic imaging , Child , Diffusion Tensor Imaging , Epilepsies, Partial/diagnostic imaging , Humans , White Matter/diagnostic imaging
13.
Neuroimage ; 215: 116763, 2020 07 15.
Article in English | MEDLINE | ID: mdl-32294537

ABSTRACT

INTRODUCTION: Cortico-cortical evoked potentials (CCEPs) are utilized to identify effective networks in the human brain. Following single-pulse electrical stimulation of cortical electrodes, evoked responses are recorded from distant cortical areas. A negative deflection (N1) which occurs 10-50 â€‹ms post-stimulus is considered to be a marker for direct cortico-cortical connectivity. However, with CCEPs alone it is not possible to observe the white matter pathways that conduct the signal or accurately predict N1 amplitude and latency at downstream recoding sites. Here, we develop a new approach, termed "dynamic tractography," which integrates CCEP data with diffusion-weighted imaging (DWI) data collected from the same patients. This innovative method allows greater insights into cortico-cortical networks than provided by each method alone and may improve the understanding of large-scale networks that support cognitive functions. The dynamic tractography model produces several fundamental hypotheses which we investigate: 1) DWI-based pathlength predicts N1 latency; 2) DWI-based pathlength negatively predicts N1 voltage; and 3) fractional anisotropy (FA) along the white matter path predicts N1 propagation velocity. METHODS: Twenty-three neurosurgical patients with drug-resistant epilepsy underwent both extraoperative CCEP recordings and preoperative DWI scans. Subdural grids of 3 â€‹mm diameter electrodes were used for stimulation and recording, with 98-128 eligible electrodes per patient. CCEPs were elicited by trains of 1 â€‹Hz stimuli with an intensity of 5 â€‹mA and recorded at a sample rate of 1 â€‹kHz. N1 peak and latency were defined as the maximum of a negative deflection within 10-50 â€‹ms post-stimulus with a z-score > 5 relative to baseline. Electrodes and DWI were coregistered to construct electrode connectomes for white matter quantification. RESULTS: Clinical variables (age, sex, number of anti-epileptic drugs, handedness, and stimulated hemisphere) did not correlate with the key outcome measures (N1 peak amplitude, latency, velocity, or DWI pathlength). All subjects and electrodes were therefore pooled into a group-level analysis to determine overall patterns. As hypothesized, DWI path length positively predicted N1 latency (R2 â€‹= â€‹0.81, ߠ​= â€‹1.51, p â€‹= â€‹4.76e-16) and negatively predicted N1 voltage (R2 â€‹= â€‹0.79, ߠ​= â€‹-0.094, p â€‹= â€‹9.30e-15), while FA predicted N1 propagation velocity (R2 â€‹= â€‹0.35, ߠ​= â€‹48.0, p â€‹= â€‹0.001). CONCLUSION: We have demonstrated that the strength and timing of the CCEP N1 is dependent on the properties of the underlying white matter network. Integrated CCEP and DWI visualization allows robust localization of intact axonal pathways which effectively interconnect eloquent cortex.


Subject(s)
Cerebral Cortex/diagnostic imaging , Cerebral Cortex/physiopathology , Diffusion Magnetic Resonance Imaging/methods , Electroencephalography/methods , Evoked Potentials , White Matter/diagnostic imaging , White Matter/physiopathology , Adolescent , Child , Child, Preschool , Drug Resistant Epilepsy/diagnostic imaging , Drug Resistant Epilepsy/physiopathology , Electrodes, Implanted , Female , Humans , Image Processing, Computer-Assisted , Male , Neural Pathways/diagnostic imaging , Neural Pathways/physiopathology , Signal Processing, Computer-Assisted
14.
Environ Res ; 179(Pt A): 108802, 2019 12.
Article in English | MEDLINE | ID: mdl-31629181

ABSTRACT

The potential use of activated carbon (AC) as an inexpensive and effective alternative sorbent material in thermal desorption is presented and validated for the analysis of aromatic volatile organic compounds (VOCs) such as benzene, toluene, m-xylene, and styrene (BTXS) in air. The optimum desorption conditions of an AC sampling tube (2 mg AC bed) were determined and compared with a commercial three-bed (Carbopack; C + B + X) tube sampler as a reference. The AC sampler exhibited good linearity (R2 > 0.99) and reproducibility (RSE of 2.38 ±â€¯0.21%) for BTXS analysis. The AC tube sampler showed good storability (up to 3 d) and excellent recyclability (up to 50 cycles). An analysis of BTXS in ambient air showed excellent agreement between AC and CBX (bias < 5%). The 1% breakthrough volume values for 2 mg AC, when tested at 100 ppb of benzene as a sole component or in a BTXS mixture, were 10,000 or 5000 L g-1, respectively. The results of this study support the performance of AC as a suitable medium for sampling VOCs as reliable as high-cost commercial sorbent products.


Subject(s)
Air Pollutants , Charcoal , Volatile Organic Compounds , Benzene , Reproducibility of Results
15.
BMC Anesthesiol ; 19(1): 233, 2019 12 18.
Article in English | MEDLINE | ID: mdl-31852445

ABSTRACT

BACKGROUND: Intravenous anesthesia has been reported to have a favorable effect on the prognosis of cancer patients. This study was performed to analyze data regarding the relation between anesthetics and the prognosis of cancer patients in our hospital. METHODS: The medical records of patients who underwent surgical resection for gastric, lung, liver, colon, and breast cancer between January 2006 and December 2009 were reviewed. Depending on the type of anesthetic, it was divided into total intravenous anesthesia (TIVA) or volatile inhaled anesthesia (VIA) group. The 5-year overall survival outcomes were analyzed by log-rank test. Cox proportional hazards modeling was used for sensitivity. RESULTS: The number of patients finally included in the comparison after propensity matching came to 729 in each group. The number of surviving patients at 5 years came to 660 (90.5%) in the TIVA and 673 (92.3%) in the VIA. The type of anesthetic did not affect the 5-year survival rate according to the log-rank test (P = 0.21). Variables associated with a significant increase in the hazard of death after multivariable analysis were male sex and metastasis at surgery. CONCLUSIONS: There were no differences in 5-year overall survival between two groups in the cancer surgery. TRIAL REGISTRATION: Trial registration: CRIS KCT0004101. Retrospectively registered 28 June 2019.


Subject(s)
Anesthesia, Inhalation/methods , Anesthesia, Intravenous/methods , Neoplasms/surgery , Aged , Female , Humans , Male , Middle Aged , Neoplasm Metastasis , Neoplasms/pathology , Prognosis , Retrospective Studies , Sex Factors , Survival Rate
16.
Article in English | MEDLINE | ID: mdl-29661877

ABSTRACT

Recent reports highlighting the global significance of cryptosporidiosis among children have renewed efforts to develop control measures. We evaluated the efficacy of bumped kinase inhibitor (BKI) 1369 in the gnotobiotic piglet model of acute diarrhea caused by Cryptosporidium hominis, the species responsible for most human cases. Five-day treatment with BKI 1369 reduced signs of disease early during treatment compared to those of untreated animals. Piglets treated with BKI 1369 exhibited significant reductions of oocyst excretion, mucosal colonization by C. hominis, and mucosal lesions, which resulted in considerable symptomatic improvement. BKI 1369 reduced the parasite burden and disease severity in the gnotobiotic pig model. Together these data suggest that a BKI-mediated therapeutic may be an effective treatment against cryptosporidiosis.


Subject(s)
Antiprotozoal Agents/therapeutic use , Cryptosporidiosis/drug therapy , Cryptosporidium/drug effects , Diarrhea/drug therapy , Piperidines/therapeutic use , Pyrimidines/therapeutic use , Quinolines/therapeutic use , Acute Disease , Animals , Animals, Newborn , Cryptosporidiosis/parasitology , Diarrhea/parasitology , Disease Models, Animal , Germ-Free Life , Oocysts/metabolism , Parasite Load , Swine
17.
Environ Res ; 165: 81-90, 2018 08.
Article in English | MEDLINE | ID: mdl-29684738

ABSTRACT

The concentrations and fluxes of airborne phthalates were measured from five types of polyvinyl chloride (PVC) consumer products (vinyl flooring, wallcovering, child's toy, yoga mat, and edge protector) using a small chamber (impinger) system. Airborne phthalates released from each of those PVC samples were collected using sorbent (Tenax TA) tubes at three temperature control intervals (0, 3, and 6 h) under varying temperature conditions (25, 40, and 90 °C). A total of 11 phthalate compounds were quantified in the five PVC products examined in this study. To facilitate the comparison of phthalate emissions among PVC samples, their flux values were defined for total phthalates by summing the average fluxes of all 11 phthalates generated during the control period of 6 h. The highest flux values were seen in the edge protector sample at all temperatures (0.40 (25 °C), 9.65 (40 °C), and 75.7 µg m-2 h-1 (90 °C)) of which emission was dominated by dibutyl isophthalate. In contrast, the lowest fluxes were found in wallcovering (0.01 (25 °C) and 0.05 µg m-2 h-1 (40 °C)) and child's toy (0.23 µg m-2 h-1 (90 °C)) at each temperature level. The information regarding phthalate composition and emission patterns varied dynamically with type of PVC sample, controlled temperature, and duration of control.


Subject(s)
Air Pollutants , Floors and Floorcoverings , Phthalic Acids , Polyvinyl Chloride , Air Pollutants/analysis , Air Pollutants/chemistry , Environmental Monitoring , Humans , Phthalic Acids/analysis , Phthalic Acids/chemistry , Polyvinyl Chloride/chemistry , Temperature
18.
Surg Endosc ; 32(6): 2643-2649, 2018 06.
Article in English | MEDLINE | ID: mdl-29654527

ABSTRACT

BACKGROUND: Nonobstetric surgical interventions are required in some women during pregnancy. The most common nonobstetric conditions requiring surgery during pregnancy are acute appendicitis and cholecystitis. This study aimed to evaluate pregnancy outcomes and complications following surgical procedures for presumed nonobstetric surgical interventions during pregnancy, and to compare the outcomes between the laparoscopic and open approaches. METHODS: We conducted a retrospective study of patients who underwent laparoscopic or open surgery during pregnancy for nonobstetric surgical indications at our institution between 2008 and 2016. RESULTS: A total of 62 consecutive patients who underwent surgical intervention due to nonobstetric causes during pregnancy were included in our study. Of these, 35 (56.5%) were managed with laparoscopy and 27 (43.5%) with the open approach. Patients who underwent laparoscopy had a significantly shorter hospital stay and lower pain score on postoperative day 2 than those who underwent open surgery (5.5 vs. 7.2 days, p = 0.03 and 1.4 vs. 2.4, p < 0.01, respectively). There were no significant differences in operative complications between both groups. In advanced pregnancy (gestational age ≥ 23 weeks), 7 patients (41.2%) were managed with laparoscopy and 10 (58.8%) with the open approach. No differences in surgical complications were found between both groups in advanced pregnancy as well. CONCLUSIONS: In our study, laparoscopic surgery was found to be feasible and safe in the late second and third trimesters as well as in the first and early second trimesters without adverse effects on pregnancy.


Subject(s)
Laparoscopy , Pregnancy Complications/surgery , Acute Disease , Adult , Appendectomy/methods , Appendicitis/surgery , Cholecystectomy, Laparoscopic , Cholecystitis/surgery , Female , Follow-Up Studies , Humans , Pregnancy , Pregnancy Outcome , Pregnancy Trimesters , Retrospective Studies , Treatment Outcome
19.
J Dairy Sci ; 101(10): 8702-8710, 2018 Oct.
Article in English | MEDLINE | ID: mdl-30100515

ABSTRACT

The purpose of this study was to evaluate the antioxidant and antigenotoxic effect of dairy products milk (M) and yogurt (Y) after the addition of 2% red ginseng extract to milk (RM) and to yogurt (RY). Total phenolic content, total flavonoid content, 2,2-diphenyl-1-picrylhydrazyl radical scavenging activity, oxygen radical absorbance capacity, and total radical trapping antioxidant potential were determined in the samples. Furthermore, antigenotoxic effect of samples was measured, using comet assay in human leukocytes. Total phenolic content and total flavonoid content of RM [38.3 ± 0.8 mg of gallic acid equivalents (GAE)/100 g, 23.6 ± 0.1 mg of quercetin equivalents (QE)/100 g] and RY (41.1 ± 0.9 mg of GAE/100 g, 18.7 ± 0.1 mg of QE/100 g), respectively, were higher than those of M (6.31 ± 0.2 mg of GAE/100 g, 10.4 ± 0.1 mg of QE/100 g) and Y (8.1 ± 0.9 mg of GAE/100 g, 8.4 ± 0.2 mg of QE/100 g), respectively. The 2,2-diphenyl-1-picrylhydrazyl radical scavenging activity and oxygen radical absorbance capacity values increased significantly after the addition of 2% red ginseng in both. Additionally, the total radical trapping antioxidant potential in RM (787.7 ± 7.0 µg/mL) was lower than in M (2074.0 ± 28.4 µg/mL). The H2O2-induced DNA damage in RY (0.1 ± 0.0 mg/mL) was less than the damage in Y (0.4 ± 0.0 mg/mL), but we found no significant difference between M and RM. This study indicates that supplementation with red ginseng can fortify the antioxidant and antigenotoxic effects of dairy products effectively.


Subject(s)
Dairy Products/analysis , Leukocytes/metabolism , Panax/metabolism , Animals , Antioxidants/metabolism , Cells, Cultured , Comet Assay , Humans , Hydrogen Peroxide , Plant Extracts/metabolism
20.
Skin Pharmacol Physiol ; 31(4): 212-219, 2018.
Article in English | MEDLINE | ID: mdl-29791915

ABSTRACT

We investigated the potential effects of Costaria costata (CC) on atopic dermatitis (AD) development in chloro-2,4-dinitrobenzene (DNCB)-treated NC/Nga mice. CC is a brown alga distributed across the seas of Korea, China, and Japan. A total of 40 mice were randomly assigned to 5 groups with 8 mice per group: untreated Balb/c mice, AD control (0.1% w/v DNCB-treated NC/Nga mice), positive control (i.e., DNCB-treated NC/Nga mice fed a dietary supplement of 66.6 mg/kg of body weight [b.w.] of CJLP133), DNCB-treated NC/Nga mice fed a dietary supplement of 100 mg/kg b.w. of CCE10 (CCE10 100), and DNCB-treated mice fed a dietary supplement of 300 mg/kg b.w. of CCE10 (CCE10 300) groups. The CCE10 100 and CCE10 300 treatment groups suppressed AD development including clinical and histopathological changes and a reduction in skin hydration induced by DNCB. In addition, Th2 cytokine production in primary splenocytes, serum IgE and histamine production, and mast cell infiltration into the skin were suppressed in the CCE10 300 mice compared to the CCE10 100 mice. Our finding demonstrated an inhibitory effect of CCE10 in AD development by means of improving the Th1/Th2 cytokine balance and anti-inflammatory effect in an in vivo model.


Subject(s)
Anti-Inflammatory Agents/pharmacology , Dermatitis, Atopic/drug therapy , Dermatologic Agents/pharmacology , Phaeophyceae/chemistry , Animals , Anti-Inflammatory Agents/administration & dosage , Anti-Inflammatory Agents/isolation & purification , Cytokines/immunology , Dermatitis, Atopic/immunology , Dermatitis, Atopic/pathology , Dermatologic Agents/administration & dosage , Dermatologic Agents/isolation & purification , Dietary Supplements , Dinitrochlorobenzene/administration & dosage , Disease Models, Animal , Dose-Response Relationship, Drug , Immunoglobulin E/blood , Male , Mast Cells/metabolism , Mice , Mice, Inbred BALB C , Spleen/cytology , Th1 Cells/immunology , Th2 Cells/immunology
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