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1.
J Infect Dis ; 218(5): 801-808, 2018 07 24.
Article in English | MEDLINE | ID: mdl-29701830

ABSTRACT

Background: Africa has the highest incidence of gonorrhea in the world. However, little is known about gonococcal populations in this continent or mechanisms of antimicrobial resistance (AMR). Methods: Whole-genome sequence data were analyzed from 103 Neisseria gonorrhoeae isolates from 73 patients, mainly men who have sex with men, from coastal Kenya. We annotated loci, defined the core genome, defined mechanisms of AMR, and performed phylogenetic analysis. For patients with multiple episodes of gonorrhea, we determined whether infections occurred with related strains. Results: We identified 3 clusters of isolates that are phylogenetically distinct from isolates found elsewhere. Plasmids were virtually ubiquitous: pTetM and pblaTEM were found in 97%, and 55% of isolates, respectively. This was associated with high doxycycline use for undiagnosed sexually transmitted infections. Twenty-three percent of multiple episodes of gonorrhea in the same individual were caused by a related strain, suggesting inadequate treatment or reinfection. Conclusions: The prevalence of plasmid-mediated AMR in Kenyan gonococci contrasts with that in wealthy countries, where AMR is largely chromosomally mediated. Antimicrobials have a profound effect on the maintenance of lineages harboring plasmids. Doxycycline can select for tetracycline and penicillin resistance, through plasmid cooperation. Understanding the mechanisms of AMR in high-risk groups is required to inform treatment strategies.


Subject(s)
Drug Resistance, Bacterial , Gonorrhea/microbiology , Neisseria gonorrhoeae/drug effects , Neisseria gonorrhoeae/isolation & purification , Plasmids/analysis , Adolescent , Adult , Anti-Bacterial Agents/therapeutic use , Cluster Analysis , Computational Biology , Drug Utilization , Female , Gonorrhea/drug therapy , Gonorrhea/epidemiology , Humans , Kenya/epidemiology , Male , Middle Aged , Molecular Epidemiology , Molecular Sequence Annotation , Neisseria gonorrhoeae/genetics , Phylogeny , Prevalence , Sequence Analysis, DNA , Whole Genome Sequencing , Young Adult
2.
Infect Immun ; 83(3): 942-9, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25534942

ABSTRACT

Enterohemorrhagic Escherichia coli (EHEC) is an important foodborne pathogen causing gastroenteritis and more severe complications, such as hemorrhagic colitis and hemolytic uremic syndrome. Pathology is most pronounced in the colon, but to date there is no direct clinical evidence showing EHEC binding to the colonic epithelium in patients. In this study, we investigated EHEC adherence to the human colon by using in vitro organ culture (IVOC) of colonic biopsy samples and polarized T84 colon carcinoma cells. We show for the first time that EHEC colonizes human colonic biopsy samples by forming typical attaching and effacing (A/E) lesions which are dependent on EHEC type III secretion (T3S) and binding of the outer membrane protein intimin to the translocated intimin receptor (Tir). A/E lesion formation was dependent on oxygen levels and suppressed under oxygen-rich culture conditions routinely used for IVOC. In contrast, EHEC adherence to polarized T84 cells occurred independently of T3S and intimin and did not involve Tir translocation into the host cell membrane. Colonization of neither biopsy samples nor T84 cells was significantly affected by expression of Shiga toxins. Our study suggests that EHEC colonizes and forms stable A/E lesions on the human colon, which are likely to contribute to intestinal pathology during infection. Furthermore, care needs to be taken when using cell culture models, as they might not reflect the in vivo situation.


Subject(s)
Adhesins, Bacterial/genetics , Escherichia coli O157/genetics , Escherichia coli Proteins/genetics , Gene Expression Regulation, Bacterial , Intestinal Mucosa/microbiology , Receptors, Cell Surface/genetics , Shiga Toxins/genetics , Adhesins, Bacterial/metabolism , Bacterial Adhesion , Cell Line, Tumor , Colon/microbiology , Colon/pathology , Escherichia coli O157/drug effects , Escherichia coli O157/metabolism , Escherichia coli O157/pathogenicity , Escherichia coli Proteins/metabolism , Humans , Intestinal Mucosa/pathology , Oxygen/pharmacology , Protein Binding , Receptors, Cell Surface/metabolism , Shiga Toxins/metabolism
3.
Cell Microbiol ; 16(8): 1255-66, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24612002

ABSTRACT

Haemolytic uraemic syndrome caused by Shiga toxin-producing E. coli (STEC) is dependent on release of Shiga toxins (Stxs) during intestinal infection and subsequent absorption into the bloodstream. An understanding of Stx-related events in the human gut is limited due to lack of suitable experimental models. In this study, we have used a vertical diffusion chamber system with polarized human colon carcinoma cells to simulate the microaerobic (MA) environment in the human intestine and investigate its influence on Stx release and translocation during STEC O157:H7 and O104:H4 infection. Stx2 was the major toxin type released during infection. Whereas microaerobiosis significantly reduced bacterial growth as well as Stx production and release into the medium, Stx translocation across the epithelial monolayer was enhanced under MA versus aerobic conditions. Increased Stx transport was dependent on STEC infection and occurred via a transcellular pathway other than macropinocytosis. While MA conditions had a similar general effect on Stx release and absorption during infection with STEC O157:H7 and O104:H4, both serotypes showed considerable differences in colonization, Stx production, and Stx translocation which suggest alternative virulence strategies. Taken together, our study suggests that the MA environment in the human colon may modulate Stx-related events and enhance Stx absorption during STEC infection.


Subject(s)
Colonic Diseases/pathology , Escherichia coli Infections/pathology , Shiga Toxin/metabolism , Shiga-Toxigenic Escherichia coli/pathogenicity , Anaerobiosis , Animals , Cell Line, Tumor , Chlorocebus aethiops , Colonic Diseases/microbiology , Cytochalasin D/pharmacology , Escherichia coli Infections/microbiology , Gastrointestinal Tract/microbiology , Gastrointestinal Tract/pathology , Hemolytic-Uremic Syndrome/microbiology , Hemolytic-Uremic Syndrome/pathology , Heterocyclic Compounds, 4 or More Rings/pharmacology , Humans , Oxygen , Pinocytosis/drug effects , Shiga Toxin/biosynthesis , Shiga-Toxigenic Escherichia coli/classification , Vero Cells
4.
Pathog Dis ; 75(6)2017 08 31.
Article in English | MEDLINE | ID: mdl-28645177

ABSTRACT

Neisseria gonorrhoeae, the causative agent of the sexually transmitted disease gonorrhoeae, possesses several mobile genetic elements (MGEs). The MGEs such as transposable elements mediate intrachromosomal rearrangements, while plasmids and the gonococcal genetic island are involved in interchromosomal gene transfer. Additionally, gonococcal MGEs serve as hotspots for recombination and integration of other genetic elements such as bacteriophages, contribute to gene regulation or spread genes through gonococcal populations by horizontal gene transfer. In this review, we summarise the literature on the structure and biology of MGEs and discuss how these genetic elements may play a role in the pathogenesis and spread of antimicrobial resistance in N. gonorrhoeae. Although an abundance of information about gonococcal MGEs exists (mainly from whole genome sequencing and bioinformatic analysis), there are still many open questions on how MGEs influence the biology of N. gonorrhoeae.


Subject(s)
Conjugation, Genetic , Drug Resistance, Bacterial/genetics , Genome, Bacterial , Interspersed Repetitive Sequences , Neisseria gonorrhoeae/genetics , Anti-Bacterial Agents/therapeutic use , Bacteriophages/genetics , Gene Transfer, Horizontal , Gonorrhea/drug therapy , Gonorrhea/microbiology , Gonorrhea/pathology , Humans , Neisseria gonorrhoeae/drug effects , Neisseria gonorrhoeae/growth & development , Neisseria gonorrhoeae/pathogenicity , Plasmids/chemistry , Plasmids/metabolism , Recombination, Genetic
5.
Article in English | MEDLINE | ID: mdl-27446815

ABSTRACT

Enterohemorrhagic E.coli (EHEC) is an important foodborne pathogen in the developed world and can cause life-threatening disease particularly in children. EHEC persists in the human gut by adhering intimately to colonic epithelium and forming characteristic attaching/effacing lesions. In this study, we investigated the innate immune response to EHEC infection with particular focus on antimicrobial peptide and protein expression by colonic epithelium. Using a novel human colonic biopsy model and polarized T84 colon carcinoma cells, we found that EHEC infection induced expression of human ß-defensin 2 (hBD2), whereas hBD1, hBD3, LL-37, and lysozyme remained unchanged. Infection with specific EHEC deletion mutants demonstrated that this was dependent on flagellin, and apical exposure to purified flagellin was sufficient to stimulate hBD2 and also interleukin (IL)-8 expression ex vivo and in vitro. Flagellin-mediated hBD2 induction was significantly reduced by inhibitors of NF-κB, MAP kinase p38 and JNK but not ERK1/2. Interestingly, IL-8 secretion by polarized T84 cells was vectorial depending on the side of stimulation, and apical exposure to EHEC or flagellin resulted in apical IL-8 release. Our results demonstrate that EHEC only induces a modest immune response in human colonic epithelium characterized by flagellin-dependent induction of hBD2 and low levels of IL-8.


Subject(s)
Colon/metabolism , Enterohemorrhagic Escherichia coli/pathogenicity , Escherichia coli Infections/immunology , Escherichia coli Proteins/metabolism , Flagellin/pharmacology , beta-Defensins/drug effects , Adhesins, Bacterial/genetics , Adhesins, Bacterial/metabolism , Anti-Infective Agents/pharmacology , Bacterial Adhesion , Biopsy , Cell Line, Tumor , Colon/microbiology , Colonic Neoplasms , Escherichia coli Proteins/genetics , Flagellin/genetics , Gene Expression Regulation, Bacterial , Humans , Immunity, Innate , Interleukin-8/metabolism , Intestinal Mucosa/metabolism , Intestinal Mucosa/microbiology , NF-kappa B/metabolism , Sequence Deletion
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