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1.
Allergy ; 73(5): 1131-1134, 2018 05.
Article in English | MEDLINE | ID: mdl-29161766

ABSTRACT

IgE antibodies (Ab) specific to galactose-α-1,3-galactose (alpha-gal) are responsible for a delayed form of anaphylaxis that occurs 3-6 hours after red meat ingestion. In a unique prospective study of seventy participants referred with a diagnosis of idiopathic anaphylaxis (IA), six (9%) were found to have IgE to alpha-gal. Upon institution of a diet free of red meat, all patients had no further episodes of anaphylaxis. Two of these individuals had indolent systemic mastocytosis (ISM). Those with ISM had more severe clinical reactions but lower specific IgE to alpha-gal and higher serum tryptase levels, reflective of the mast cell burden. The identification of alpha-gal syndrome in patients with IA supports the need for routine screening for this sensitivity as a cause of anaphylaxis, where reactions to alpha-gal are delayed and thus may be overlooked.


Subject(s)
Anaphylaxis/etiology , Anaphylaxis/immunology , Food Hypersensitivity/immunology , Galactose/immunology , Red Meat/adverse effects , Adult , Aged , Anaphylaxis/complications , Animals , Food Hypersensitivity/complications , Humans , Hypersensitivity, Delayed/etiology , Hypersensitivity, Delayed/immunology , Immunoglobulin E/immunology , Male , Mastocytosis, Systemic/complications , Mastocytosis, Systemic/immunology , Middle Aged
2.
J Virol ; 88(9): 4721-35, 2014 May.
Article in English | MEDLINE | ID: mdl-24522914

ABSTRACT

UNLABELLED: The impact of Epstein-Barr virus (EBV) on human health is substantial, but vaccines that prevent primary EBV infections or treat EBV-associated diseases are not yet available. The Epstein-Barr nuclear antigen 1 (EBNA-1) is an important target for vaccination because it is the only protein expressed in all EBV-associated malignancies. We have designed and tested two therapeutic EBV vaccines that target the rhesus (rh) lymphocryptovirus (LCV) EBNA-1 to determine if ongoing T cell responses during persistent rhLCV infection in rhesus macaques can be expanded upon vaccination. Vaccines were based on two serotypes of E1-deleted simian adenovirus and were administered in a prime-boost regimen. To further modulate the response, rhEBNA-1 was fused to herpes simplex virus glycoprotein D (HSV-gD), which acts to block an inhibitory signaling pathway during T cell activation. We found that vaccines expressing rhEBNA-1 with or without functional HSV-gD led to expansion of rhEBNA-1-specific CD8(+) and CD4(+) T cells in 33% and 83% of the vaccinated animals, respectively. Additional animals developed significant changes within T cell subsets without changes in total numbers. Vaccination did not increase T cell responses to rhBZLF-1, an immediate early lytic phase antigen of rhLCV, thus indicating that increases of rhEBNA-1-specific responses were a direct result of vaccination. Vaccine-induced rhEBNA-1-specific T cells were highly functional and produced various combinations of cytokines as well as the cytolytic molecule granzyme B. These results serve as an important proof of principle that functional EBNA-1-specific T cells can be expanded by vaccination. IMPORTANCE: EBV is a common human pathogen that establishes a persistent infection through latency in B cells, where it occasionally reactivates. EBV infection is typically benign and is well controlled by the host adaptive immune system; however, it is considered carcinogenic due to its strong association with lymphoid and epithelial cell malignancies. Latent EBNA-1 is a promising target for a therapeutic vaccine, as it is the only antigen expressed in all EBV-associated malignancies. The goal was to determine if rhEBNA-1-specific T cells could be expanded upon vaccination of infected animals. Results were obtained with vaccines that target EBNA-1 of rhLCV, a virus closely related to EBV. We found that vaccination led to expansion of rhEBNA-1 immune cells that exhibited functions fit for controlling viral infection. This confirms that rhEBNA-1 is a suitable target for therapeutic vaccines. Future work should aim to generate more-robust T cell responses through modified vaccines.


Subject(s)
CD4-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/immunology , Herpesviridae Infections/veterinary , Herpesvirus Vaccines/immunology , Lymphocryptovirus/immunology , Viral Proteins/immunology , Adenoviruses, Simian/genetics , Animals , Drug Carriers , Female , Genetic Vectors , Herpesviridae Infections/immunology , Herpesvirus Vaccines/administration & dosage , Herpesvirus Vaccines/genetics , Lymphocryptovirus/genetics , Macaca mulatta , Vaccination/methods , Viral Proteins/genetics
3.
Clin Exp Allergy ; 45(8): 1288-95, 2015 Aug.
Article in English | MEDLINE | ID: mdl-25711241

ABSTRACT

Cardiovascular disease (CVD) increases the risk of severe or fatal anaphylaxis, and some medications for CVD treatment can exacerbate anaphylaxis. The aim of this article is to review the effect of anaphylaxis on the heart, the potential impact of medications for CVD on anaphylaxis and anaphylaxis treatment, and the cardiovascular effects of epinephrine. The therapeutic dilemmas arising from these issues are also discussed and management strategies proposed. PubMed searches were performed for the years 1990-2014 inclusive, using terms such as angiotensin-converting enzyme (ACE) inhibitors, adrenaline, allergic myocardial infarction, anaphylaxis, angiotensin-receptor blockers (ARBs), beta-adrenergic blockers, epinephrine, and Kounis syndrome. Literature analysis indicated that: cardiac mast cells are key constituents of atherosclerotic plaques; mast cell mediators play an important role in acute coronary syndrome (ACS); patients with CVD are at increased risk of developing severe or fatal anaphylaxis; and medications for CVD treatment, including beta-adrenergic blockers and ACE inhibitors, potentially exacerbate anaphylaxis or make it more difficult to treat. Epinephrine increases myocardial contractility, decreases the duration of systole relative to diastole, and enhances coronary blood flow. Its transient adverse effects include pallor, tremor, anxiety, and palpitations. Serious adverse effects (including ventricular arrhythmias and hypertension) are rare, and are significantly more likely after intravenous injection than after intramuscular injection. Epinephrine is life-saving in anaphylaxis; second-line medications (including antihistamines and glucocorticoids) are not. In CVD patients (especially those with ACS), the decision to administer epinephrine for anaphylaxis can be difficult, and its benefits and potential harms need to be carefully considered. Concerns about potential adverse effects need to be weighed against concerns about possible death from untreated anaphylaxis, but there is no absolute contraindication to epinephrine injection in anaphylaxis.


Subject(s)
Anaphylaxis , Cardiovascular Diseases , Mast Cells/immunology , Myocardium/immunology , Anaphylaxis/etiology , Anaphylaxis/immunology , Anaphylaxis/pathology , Anaphylaxis/therapy , Animals , Cardiovascular Diseases/complications , Cardiovascular Diseases/immunology , Cardiovascular Diseases/pathology , Cardiovascular Diseases/therapy , Humans , Mast Cells/pathology , Myocardial Contraction/immunology , Myocardium/pathology
4.
J Virol ; 87(15): 8351-62, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23698300

ABSTRACT

Epstein-Barr virus (EBV) infection leads to lifelong viral persistence through its latency in B cells. EBV-specific T cells control reactivations and prevent the development of EBV-associated malignancies in most healthy carriers, but infection can sometimes cause chronic disease and malignant transformation. Epstein-Barr nuclear antigen 1 (EBNA-1) is the only viral protein consistently expressed during all forms of latency and in all EBV-associated malignancies and is a promising target for a therapeutic vaccine. Here, we studied the EBNA-1-specific immune response using the EBV-homologous rhesus lymphocryptovirus (rhLCV) infection in rhesus macaques. We assessed the frequency, phenotype, and cytokine production profiles of rhLCV EBNA-1 (rhEBNA-1)-specific T cells in 15 rhesus macaques and compared them to the lytic antigen of rhLCV BZLF-1 (rhBZLF-1). We were able to detect rhEBNA-1-specific CD4(+) and/or CD8(+) T cells in 14 of the 15 animals screened. In comparison, all 15 animals had detectable rhBZLF-1 responses. Most peptide-specific CD4(+) T cells exhibited a resting phenotype of central memory (TCM), while peptide-specific CD8(+) T cells showed a more activated phenotype, belonging mainly to the effector cell subset. By comparing our results to the human EBV immune response, we demonstrate that the rhLCV model is a valid system for studying chronic EBV infection and for the preclinical development of therapeutic vaccines.


Subject(s)
CD4-Positive T-Lymphocytes/immunology , CD8-Positive T-Lymphocytes/immunology , Epstein-Barr Virus Nuclear Antigens/immunology , Herpesviridae Infections/immunology , Lymphocryptovirus/immunology , Trans-Activators/immunology , Tumor Virus Infections/immunology , Animals , Cytokines/metabolism , Disease Models, Animal , Female , Herpesviridae Infections/virology , Macaca mulatta , Tumor Virus Infections/virology
5.
Allergy ; 69(8): 983-91, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24835773

ABSTRACT

Anaphylaxis is a life-threatening condition that is increasing in prevalence in the developed world. There is universal expert agreement that rapid intramuscular injection of adrenaline is life-saving and constitutes the first-line treatment of anaphylaxis. The unpredictable nature of anaphylaxis and its rapid progression makes necessary the availability of a portable emergency treatment suitable for self-administration. Thus, anaphylaxis treatment guidelines recommend that at-risk patients are provided with adrenaline auto-injectors (AAIs). Despite these clear recommendations, current emergency treatment of anaphylaxis continues to be inadequate in many cases. The aim of this review is to highlight the barriers that exist to the use and availability of AAIs and that prevent proper management of anaphylaxis. In addition, we review the characteristics of all AAIs that are presently available in Europe and the USA and discuss the need for regulatory requirements to establish the performance characteristics of these devices.


Subject(s)
Adrenergic alpha-Agonists/administration & dosage , Anaphylaxis/drug therapy , Epinephrine/administration & dosage , Anaphylaxis/epidemiology , Disease Management , Emergency Medical Services , Humans , Injections, Intramuscular , Prevalence , Risk Factors , Self Administration , Treatment Outcome
6.
J Investig Allergol Clin Immunol ; 23(7): 495-503, 2013.
Article in English | MEDLINE | ID: mdl-24654314

ABSTRACT

BACKGROUND AND OBJECTIVE: MP29-02 (Dymista), a novel intranasal formulation of azelastine hydrochloride (AZE) and fluticasone propionate (FP), is significantly better than first-line therapy for the treatment of moderate-to-severe seasonal allergic rhinitis (SAR), and is well tolerated following 52 weeks of continuous use in chronic rhinitis. The aim of this study was to evaluate the long-term efficacy of MP29-02 versus FP in patients with chronic rhinitis. PATIENTS AND METHODS: In total, 612 chronic rhinitis patients (perennial allergic rhinitis [PAR], n = 424; nonallergic rhinitis, n=188) aged 12 years or older were enrolled into this open-label, parallel-group study and randomized to MP29-02 (1 spray/nostril bid) or FP nasal spray (2 sprays/nostril qd) for 52 weeks. Efficacy was assessed by change from baseline in PM reflective total nasal symptom score (rTNSS), time to first achieve 100% PM rTNSS reduction from baseline, and percentage of symptom-free days in the total and PAR populations posthoc. RESULTS: MP29-02 reduced patients' PM rTNSS from baseline significantly more than FP, from Day 1 up to and including week 28 (-2.88 vs -2.53; P = .0048), with treatment difference maintained for 52 weeks. Fluctuation in significance after week 28 might be explained, at least in part, by decreasing sample size, permitted according to ICH guidelines. By Day 1 almost twice as many MP29-02-patients were symptom free. After 1 month, 71.1% of MP29-02 patients experienced 100% rTNSS reduction (60.3% for FP), and did on a median of 9 days faster (P=.0024). Over 52 weeks MP29-02 patients experienced 8.4% more symptom-free days (P = .0005). These results were mirrored in the PAR subpopulation. CONCLUSION: These results confirm MP29-02's wide therapeutic spectrum and assert its consistent superiority over an intranasal corticosteroid.


Subject(s)
Androstadienes/therapeutic use , Phthalazines/therapeutic use , Rhinitis/drug therapy , Adolescent , Adult , Aged , Aged, 80 and over , Child , Chronic Disease , Drug Combinations , Female , Humans , Male , Middle Aged
7.
Science ; 164(3884): 1185-7, 1969 Jun 06.
Article in English | MEDLINE | ID: mdl-4976883

ABSTRACT

The vowel repertoire of a rhesus monkey (Macaca mulatta) was explored by means of a computer program that calculated formant frequencies from the area function of the animal's supralaryngeal vocal tract, which was systematically varied within the limits imposed by anatomical constraints. The resulting vowels were compared with those of humans and with recorded vocalizations of nonhuman primates. The computer model indicates that the acoustic "vowel space" of a rhesus monkey is quite restricted compared to that of the human. This limitation results from the lack of a pharyngeal region that can change its cross-sectional area. These animals thus lack the output mechanism necessary for production of human speech. Man's speech output mechanism is apparently species-specific.


Subject(s)
Haplorhini , Phonetics , Speech , Vocalization, Animal , Animals , Computers , Humans , Models, Biological , Pharynx/anatomy & histology , Species Specificity , Speech, Alaryngeal
8.
Science ; 248(4963): 1646-50, 1990 Jun 29.
Article in English | MEDLINE | ID: mdl-2194289

ABSTRACT

Transcription factor IID (TFIID) binds to the TATA box promoter element and regulates the expression of most eukaryotic genes transcribed by RNA polymerase II. Complementary DNA (cDNA) encoding a human TFIID protein has been cloned. The human TFIID polypeptide has 339 amino acids and a molecular size of 37,745 daltons. The carboxyl-terminal 181 amino acids of the human TFIID protein shares 80% identity with the TFIID protein from Saccharomyces cerevisiae. The amino terminus contains an unusual repeat of 38 consecutive glutamine residues and an X-Thr-Pro repeat. Expression of DNA in reticulocyte lysates or in Escherichia coli yielded a protein that was competent for both DNA binding and transcription activation.


Subject(s)
Promoter Regions, Genetic , Saccharomyces cerevisiae/genetics , Transcription Factors/genetics , Transcription, Genetic , Amino Acid Sequence , Cloning, Molecular , Escherichia coli/genetics , Gene Expression , HeLa Cells/metabolism , Humans , Molecular Sequence Data , Recombinant Proteins/metabolism , Reticulocytes/metabolism , Sequence Homology, Nucleic Acid , Transcription Factor TFIID , Transcription Factors/metabolism
9.
Mol Cell Biol ; 14(12): 8365-75, 1994 Dec.
Article in English | MEDLINE | ID: mdl-7969171

ABSTRACT

Transcriptional activator proteins stimulate the formation of a preinitiation complex that may be distinct from a basal-level transcription complex in its composition and stability. Components of the general transcription factors that form activator-dependent stable intermediates were determined by the use of Sarkosyl and oligonucleotide challenge experiments. High-level transcriptional activation by the Epstein-Barr virus-encoded Zta protein required an activity in the TFIID fraction that is distinct from the TATA-binding protein (TBP) and the TBP-associated factors. This additional activity copurifies with and is likely to be identical to the previously defined coactivator, USA (M. Meisterernst, A. L. Roy, H. M. Lieu, and R. G. Roeder, Cell 66:981-994, 1991). The formation of a stable preinitiation complex intermediate resistant to Sarkosyl required the preincubation of the promoter DNA with Zta, holo-TFIID (TBP and TBP-associated factors), TFIIB, TFIIA, and the coactivator USA. The formation of a Zta response element-resistant preinitiation complex required the preincubation of promoter DNA with Zta, holo-TFIID, TFIIB, and TFIIA. Agarose gel electrophoretic mobility shift showed that a preformed Zta-holo-TFIID-TFIIA complex was resistant to Sarkosyl and to Zta response element oligonucleotide challenge. DNase I footprinting suggests that only Zta, holo-TFIID, and TFIIA make significant contacts with the promoter DNA. These results provide functional and physical evidence that the Zta transcriptional activator influences at least two distinct steps in preinitiation complex assembly, the formation of the stable holo-TFIID-TFIIA-promoter complex and the subsequent binding of TFIIB and a USA-like coactivator.


Subject(s)
DNA-Binding Proteins/metabolism , Trans-Activators/metabolism , Transcription, Genetic , Viral Proteins , Base Sequence , HeLa Cells , Herpesvirus 4, Human/genetics , Humans , In Vitro Techniques , Macromolecular Substances , Molecular Sequence Data , Oligodeoxyribonucleotides/chemistry , Transcription Factor TFIIA , Transcription Factor TFIIB , Transcription Factor TFIID , Transcription Factors/metabolism , Transcriptional Activation
10.
Mol Cell Biol ; 18(7): 3926-35, 1998 Jul.
Article in English | MEDLINE | ID: mdl-9632777

ABSTRACT

Large T antigen (T antigen), the early gene product of simian virus 40 (SV40), is a potent transcriptional activator of both cellular and viral genes. Recently we have shown that T antigen is tightly associated with TFIID and, in this position, performs a TATA-binding protein (TBP)-associated factor (TAF)-like function. Based on this observation, we asked whether T antigen affected steps in preinitiation complex assembly. Using purified components in in vitro complex assembly assays, we found that T antigen specifically enhances the formation of the TBP-TFIIA complex on the TATA element. T antigen accomplishes this by increasing the rate of formation of the TBP-TFIIA complex on the TATA element and by stabilizing the complexes after they are formed on the promoter. In addition, DNA immunoprecipitation experiments indicate that T antigen is associated with the stabilized TBP-TFIIA complexes bound to the DNA. In this regard, it has previously been shown that T antigen interacts with TBP; in the present study, we show that T antigen also interacts with TFIIA in vitro. In testing the ability of T antigen to stabilize the TBP-TFIIA complex, we found that stabilization is highly sensitive to the specific sequence context of the TATA element. Previous studies showed that T antigen could activate simple promoters containing the TATA elements from the hsp70 and c-fos gene promoters but failed to significantly activate similar promoters containing the TATA elements from the promoters of the SV40 early and adenovirus E2a genes. We find that the ability to stabilize the TBP-TFIIA complex on the hsp70 and c-fos TATA elements, and not on the SV40 early and E2A TATA elements, correlates with the ability or inability to activate promoters containing these TATA elements.


Subject(s)
Antigens, Polyomavirus Transforming/metabolism , DNA-Binding Proteins/metabolism , TATA Box , Transcription Factors/metabolism , Adenovirus E2 Proteins/genetics , Animals , Antigens, Polyomavirus Transforming/genetics , Binding Sites , Cell Line , Chlorocebus aethiops , DNA Footprinting , Deoxyribonuclease I/metabolism , HSP70 Heat-Shock Proteins/genetics , HeLa Cells , Humans , Precipitin Tests , Promoter Regions, Genetic , Proto-Oncogene Proteins c-fos/genetics , TATA-Box Binding Protein , Transcription Factor TFIIA , Transcription Factor TFIIB , Transcription Factor TFIID , Transcription Factors, TFII/metabolism
11.
Mol Cell Biol ; 16(5): 2110-8, 1996 May.
Article in English | MEDLINE | ID: mdl-8628277

ABSTRACT

The regulation of RNA polymerase II-mediated transcription involves both direct and indirect interactions among regulatory proteins and the general transcription factors (GTFs) that assemble at TATA-containing promoters. Here we show that the oncogenic transcription factors Fos and Jun make direct physical contacts with three proteins of the basal transcription apparatus, TFIIE-34 (TFIIE-beta), TFIIF-30 (RAP30), and TFIIF-74 (RAP74). The interactions among the activator proteins and these three GTFs were not detected with other transcription factors, including some bZIP protein family members. Both coimmunoprecipitation and protein blotting experiments demonstrated that the interactions were strongly favored by dimerization of Fos and Jun and that they involved the basic region and basic region-proximal domain of both proteins. Mutations within the DNA-binding domains of Fos and Jun abolished binding to GTFs, although the presence of DNA was not required for the association. Surprisingly, only a single basic region in the context of a protein dimer was sufficient for the interaction. Squelching of AP-1-dependent transcription in vitro by an excess of Fos-Jun dimers was relieved by the addition of TFIIE, indicating that it is a direct functional target of Fos and Jun. These results suggest that dimerization induces a conformational alteration in the basic region of Fos and Jun that promotes an association with TFIIE-34 and TFIIF, thus contributing to transcription initiation.


Subject(s)
Proto-Oncogene Proteins c-fos/metabolism , Proto-Oncogene Proteins c-jun/metabolism , Transcription Factors, TFII , Transcription Factors/metabolism , Transcription, Genetic , Animals , Blotting, Western , Cell Line , Cloning, Molecular , Gene Expression Regulation , Humans , Mutagenesis , Plasmids , Protein Multimerization , Proto-Oncogene Proteins c-fos/biosynthesis , Proto-Oncogene Proteins c-jun/biosynthesis , RNA Polymerase II/metabolism , Rats , Recombinant Fusion Proteins/biosynthesis , Recombinant Fusion Proteins/metabolism , Sequence Tagged Sites , Transcription Factor AP-1/metabolism
12.
Mol Cell Biol ; 17(11): 6624-32, 1997 Nov.
Article in English | MEDLINE | ID: mdl-9343426

ABSTRACT

Different mechanisms of transcriptional activation may be required for distinct classes of promoters and cellular conditions. The Epstein-Barr virus (EBV)-encoded transcriptional activator Zta recruits the general transcription factors IID (TFIID) and IIA (TFIIA) to promoter DNA and induces a TATA box-binding protein (TBP)-associated factor-dependent footprint downstream of the transcriptional initiation site. In this study, we investigated the functional significance of TFIID-TFIIA (D-A complex) recruitment by Zta. Alanine substitution mutations in the Zta activation domain which eliminate the ability of Zta to stimulate the D-A complex were examined. These Zta mutants were defective in the ability to activate transcription from an EBV-derived promoter (BHLF1) but activated a highly responsive synthetic promoter (Z7E4T). Both the number of activator binding sites and the core promoter region contribute to the requirement for D-A complex recruitment. These functionally distinct core promoters had significant differences in affinity for TBP and TFIID binding. The D-A complex-recruiting activity of Zta was found to be important for promoter selection in the presence of a competitor template. Conditions which limit TFIID binding to the TATA element or compromise the ability of TFIIA to bind TBP required activator stimulation of the D-A complex. These results indicate that D-A complex recruitment is one of at least two activation pathways utilized by Zta and is the essential pathway for a subset of promoters and conditions which limit TFIID binding to the TATA element.


Subject(s)
DNA-Binding Proteins/metabolism , Promoter Regions, Genetic , Trans-Activators/metabolism , Transcription Factors, TFII/metabolism , Transcription Factors/metabolism , Viral Proteins/metabolism , DNA-Binding Proteins/genetics , Gene Expression Regulation , Mutation , Phenotype , Protein Binding , TATA Box , TATA-Box Binding Protein , Trans-Activators/genetics , Transcription Factor TFIIA , Transcription Factor TFIID , Transcription, Genetic , Viral Proteins/genetics
13.
Mol Cell Biol ; 19(4): 2846-52, 1999 Apr.
Article in English | MEDLINE | ID: mdl-10082550

ABSTRACT

Posttranslational modification of general transcription factors may be an important mechanism for global gene regulation. The general transcription factor IIA (TFIIA) binds to the TATA binding protein (TBP) and is essential for high-level transcription mediated by various activators. Modulation of the TFIIA-TBP interaction is a likely target of transcriptional regulation. We report here that Toa1, the large subunit of yeast TFIIA, is phosphorylated in vivo and that this phosphorylation stabilizes the TFIIA-TBP-DNA complex and is required for high-level transcription. Alanine substitution of serine residues 220, 225, and 232 completely eliminated in vivo phosphorylation of Toa1, although no single amino acid substitution of these serine residues eliminated phosphorylation in vivo. Phosphorylated TFIIA was 30-fold more efficient in forming a stable complex with TBP and TATA DNA. Dephosphorylation of yeast-derived TFIIA reduced DNA binding activity, and recombinant TFIIA could be stimulated by in vitro phosphorylation with casein kinase II. Yeast strains expressing the toa1 S220/225/232A showed reduced high-level transcriptional activity at the URA1, URA3, and HIS3 promoters but were viable. However, S220/225/232A was synthetically lethal when combined with an alanine substitution mutation at W285, which disrupts the TFIIA-TBP interface. Phosphorylation of TFIIA could therefore be an important mechanism of transcription modulation, since it stimulates TFIIA-TBP association, enhances high-level transcription, and contributes to yeast viability.


Subject(s)
DNA-Binding Proteins/metabolism , Saccharomyces cerevisiae Proteins , Saccharomyces cerevisiae/physiology , TATA Box , Transcription Factors/metabolism , Transcription, Genetic , Fungal Proteins/genetics , Gene Expression Regulation , Genes, Fungal , Hydro-Lyases/genetics , Models, Genetic , Phosphorylation , Protein Binding , Protein Processing, Post-Translational , TATA-Box Binding Protein , Transcription Factor TFIIA
14.
Mol Cell Biol ; 11(1): 63-74, 1991 Jan.
Article in English | MEDLINE | ID: mdl-1986253

ABSTRACT

Transcription factor IID from Saccharomyces cerevisiae (YIID) binds the TATA box element present in most RNA polymerase II promoters. In this work, partial proteolysis was used as a biochemical probe of YIID structure. YIID consists of a protease-sensitive amino terminus and a highly stable, protease-resistant carboxy-terminal core. The cleavage sites of the predominant chymotrypsin- and trypsin-derived fragments were mapped to amino acid residues 40 to 41 and 48 to 49, respectively, by amino-terminal peptide sequencing. Removal of the amino terminus resulted in a dramatic increase in the ability of YIID to form a stable complex with DNA during gel electrophoresis mobility shift assays and a two- to fourfold increase in DNA-binding affinity, as assayed by DNase I footprinting analysis. The carboxy-terminal 190-amino-acid core was competent for transcription in vitro and was similar in activity to native YIID. DNA containing a TATA element induced hypersensitive sites in the amino-terminal domain and stabilized the core domain to further proteolytic attack. Native YIID did not bind to a TATA box at 0 degrees C, whereas the carboxy-terminal DNA-binding domain did. These results suggest that YIID undergoes a conformational change upon binding to a TATA box. Southern blotting showed that the carboxy-terminal domain is highly conserved, while the amino-terminal domain diverged rapidly in evolution, even between closely related budding yeasts.


Subject(s)
DNA-Binding Proteins/ultrastructure , Transcription Factors/ultrastructure , Binding Sites , Fungal Proteins/ultrastructure , Gene Expression , Genes, Fungal , In Vitro Techniques , Molecular Structure , Peptide Mapping , Promoter Regions, Genetic , Protein Conformation , Recombinant Proteins , Regulatory Sequences, Nucleic Acid , Restriction Mapping , Saccharomyces cerevisiae , Structure-Activity Relationship , Temperature , Transcription Factor TFIID , Transcription, Genetic
15.
Mol Cell Biol ; 13(2): 1232-7, 1993 Feb.
Article in English | MEDLINE | ID: mdl-8380894

ABSTRACT

Host cell RNA polymerase II (Pol II)-mediated transcription is inhibited by poliovirus infection. This inhibition is correlated to a specific decrease in the activity of a chromatographic fraction which contains the transcription factor TFIID. To investigate the mechanism by which poliovirus infection results in a decrease of TFIID activity, we have analyzed a component of TFIID, the TATA-binding protein (TBP). Using Western immunoblot analysis, we show that TBP is cleaved in poliovirus-infected cells at the same time postinfection as when Pol II transcription is inhibited. Further, we show that one of the cleaved forms of TBP can be reproduced in vitro by incubating TBP with cloned, purified poliovirus encoded protease 3C. Protease 3C is a poliovirus-encoded protease that specifically cleaves glutamine-glycine bonds in the viral polyprotein. The cleavage of TBP by protease 3C occurs directly. Finally, incubation of an uninfected cell-derived TBP-containing fraction (TFIID) with protease 3C results in significant inhibition of Pol II-mediated transcription in vitro. These results demonstrate that a cellular transcription factor can be directly cleaved both in vitro and in vivo by a viral protease and suggest a role of the poliovirus proteinase 3C in host cell Pol II-mediated transcription shutoff.


Subject(s)
Cysteine Endopeptidases/metabolism , DNA-Binding Proteins/metabolism , Poliovirus/enzymology , Transcription Factors/metabolism , Viral Proteins , 3C Viral Proteases , Amino Acid Sequence , Base Sequence , Blotting, Western , Cloning, Molecular , Cysteine Endopeptidases/genetics , DNA , Escherichia coli , HeLa Cells , Humans , Molecular Sequence Data , Poliovirus/physiology , Protein Biosynthesis , TATA-Box Binding Protein , Transcription Factor TFIID , Transcription, Genetic
16.
Mol Cell Biol ; 18(5): 2559-70, 1998 May.
Article in English | MEDLINE | ID: mdl-9566876

ABSTRACT

The general transcription factor IIA (TFIIA) interacts with the TATA binding protein (TBP) and promoter DNA to mediate transcription activation in vitro. To determine if this interaction is generally required for activation of all class II genes in vivo, we have constructed substitution mutations in yeast TFIIA which compromise its ability to bind TBP. Substitution mutations in the small subunit of TFIIA (Toa2) at residue Y69 or W76 significantly impaired the ability of TFIIA to stimulate TBP-promoter binding in vitro. Gene replacement of wild-type TOA2 with a W76E or Y69A/W76A mutant was lethal in Saccharomyces cerevisiae, while the Y69F/W76F mutant exhibited extremely slow growth at 30 degrees C. Both the Y69A and W76A mutants were conditionally lethal at higher temperatures. Light microscopy indicated that viable toa2 mutant strains accumulate as equal-size dumbbells and multibudded clumps. Transcription of the cell cycle-regulatory genes CLB1, CLB2, CLN1, and CTS1 was significantly reduced in the toa2 mutant strains, while the noncycling genes PMA1 and ENO2 were only modestly affected, suggesting that these toa2 mutant alleles disrupt cell cycle progression. The differential effect of these toa2 mutants on gene transcription was examined for a number of other genes. toa2 mutant strains supported high levels of CUP1, PHO5, TRP3, and GAL1 gene activation, but the constitutive expression of DED1 was significantly reduced. Activator-induced start site expression for HIS3, GAL80, URA1, and URA3 promoters was defective in toa2 mutant strains, suggesting that the TFIIA-TBP complex is important for promoters which require an activator-dependent start site selection from constitutive to regulated expression. We present evidence to indicate that transcription defects in toa2 mutants can be both activator and promoter dependent. These results suggest that the association of TFIIA with TBP regulates activator-induced start site selection and cell cycle progression in S. cerevisiae.


Subject(s)
Cell Cycle/genetics , DNA-Binding Proteins/metabolism , Saccharomyces cerevisiae Proteins , Saccharomyces cerevisiae/genetics , Transcription Factors/metabolism , DNA Mutational Analysis , Gene Expression Regulation, Fungal , Mutagenesis, Site-Directed , Phenotype , Promoter Regions, Genetic , Protein Binding , Saccharomyces cerevisiae/growth & development , TATA Box , TATA-Box Binding Protein , Transcription Factor TFIIA , Transcription Factors/genetics , Transcription, Genetic , Transcriptional Activation
17.
Mol Cell Biol ; 20(2): 634-47, 2000 Jan.
Article in English | MEDLINE | ID: mdl-10611242

ABSTRACT

SAGA is a 1.8-MDa yeast protein complex that is composed of several distinct classes of transcription-related factors, including the adaptor/acetyltransferase Gcn5, Spt proteins, and a subset of TBP-associated factors. Our results indicate that mutations that completely disrupt SAGA (deletions of SPT7 or SPT20) strongly reduce transcriptional activation at the HIS3 and TRP3 genes and that Gcn5 is required for normal HIS3 transcriptional start site selection. Surprisingly, mutations in Spt proteins involved in the SAGA-TBP interaction (Spt3 and Spt8) cause derepression of HIS3 and TRP3 transcription in the uninduced state. Consistent with this finding, wild-type SAGA inhibits TBP binding to the HIS3 promoter in vitro, while SAGA lacking Spt3 or Spt8 is not inhibitory. We detected two distinct forms of SAGA in cell extracts and, strikingly, one lacks Spt8. Conditions that induce HIS3 and TRP3 transcription result in an altered balance between these complexes strongly in favor of the form without Spt8. These results suggest that the composition of SAGA may be dynamic in vivo and may be regulated through dissociable inhibitory subunits.


Subject(s)
DNA-Binding Proteins/antagonists & inhibitors , Fungal Proteins/metabolism , Multienzyme Complexes/metabolism , Promoter Regions, Genetic/genetics , Protein Kinases/metabolism , Saccharomyces cerevisiae Proteins , Saccharomyces cerevisiae/genetics , Transcription Factors/antagonists & inhibitors , Acetyltransferases/metabolism , Anthranilate Synthase/genetics , DNA Footprinting , DNA, Fungal/genetics , DNA, Fungal/metabolism , DNA-Binding Proteins/genetics , DNA-Binding Proteins/metabolism , Fungal Proteins/genetics , Gene Deletion , Gene Expression Regulation, Fungal , Genes, Fungal/genetics , Genes, Fungal/physiology , Histone Acetyltransferases , Hydro-Lyases/genetics , Indole-3-Glycerol-Phosphate Synthase/genetics , Models, Genetic , Multienzyme Complexes/chemistry , Multienzyme Complexes/genetics , Protein Kinases/genetics , Repressor Proteins/metabolism , Saccharomyces cerevisiae/enzymology , Saccharomyces cerevisiae/growth & development , TATA Box/genetics , TATA-Box Binding Protein , Trans-Activators/metabolism , Transcription Factors/genetics , Transcription Factors/metabolism , Transcription, Genetic/genetics
18.
Mol Cell Biol ; 19(11): 7610-20, 1999 Nov.
Article in English | MEDLINE | ID: mdl-10523649

ABSTRACT

The TATA binding protein (TBP) plays a central role in eukaryotic and archael transcription initiation. We describe the isolation of a novel 23-kDa human protein that displays 41% identity to TBP and is expressed in most human tissue. Recombinant TBP-related protein (TRP) displayed barely detectable binding to consensus TATA box sequences but bound with slightly higher affinities to nonconsensus TATA sequences. TRP did not substitute for TBP in transcription reactions in vitro. However, addition of TRP potently inhibited basal and activated transcription from multiple promoters in vitro and in vivo. General transcription factors TFIIA and TFIIB bound glutathione S-transferase-TRP in solution but failed to stimulate TRP binding to DNA. Preincubation of TRP with TFIIA inhibited TBP-TFIIA-DNA complex formation and addition of TFIIA overcame TRP-mediated transcription repression. TRP transcriptional repression activity was specifically reduced by mutations in TRP that disrupt the TFIIA binding surface but not by mutations that disrupt the TFIIB or DNA binding surface of TRP. These results suggest that TFIIA is a primary target of TRP transcription inhibition and that TRP may modulate transcription by a novel mechanism involving the partial mimicry of TBP functions.


Subject(s)
DNA-Binding Proteins/metabolism , Gene Expression Regulation , Promoter Regions, Genetic , Repressor Proteins/metabolism , Transcription Factors/metabolism , Transcription, Genetic , Amino Acid Sequence , Binding Sites , Cloning, Molecular , Conserved Sequence , DNA, Complementary/genetics , DNA-Binding Proteins/genetics , Evolution, Molecular , Glutathione Transferase/genetics , Humans , Molecular Sequence Data , Nucleic Acid Synthesis Inhibitors , Protein Binding , Repetitive Sequences, Amino Acid , Repressor Proteins/genetics , Sequence Homology, Amino Acid , TATA Box Binding Protein-Like Proteins , TATA-Box Binding Protein , Tissue Distribution , Transcription Factor TFIIA , Transcription Factor TFIIB , Transcription Factors/genetics
19.
Mol Cell Biol ; 19(3): 1617-26, 1999 Mar.
Article in English | MEDLINE | ID: mdl-10022850

ABSTRACT

Latent Epstein-Barr virus (EBV) is maintained as a nucleosome-covered episome that can be transcriptionally activated by overexpression of the viral immediate-early protein, Zta. We show here that reactivation of latent EBV by Zta can be significantly enhanced by coexpression of the cellular coactivators CREB binding protein (CBP) and p300. A stable complex containing both Zta and CBP could be isolated from lytically stimulated, but not latently infected RAJI nuclear extracts. Zta-mediated viral reactivation and transcriptional activation were both significantly inhibited by coexpression of the E1A 12S protein but not by an N-terminal deletion mutation of E1A (E1ADelta2-36), which fails to bind CBP. Zta bound directly to two related cysteine- and histidine-rich domains of CBP, referred to as C/H1 and C/H3. These domains both interacted specifically with the transcriptional activation domain of Zta in an electrophoretic mobility shift assay. Interestingly, we found that the C/H3 domain was a potent dominant negative inhibitor of Zta transcriptional activation function. In contrast, an amino-terminal fragment containing the C/H1 domain was sufficient for coactivation of Zta transcription and viral reactivation function. Thus, CBP can stimulate the transcription of latent EBV in a histone acetyltransferase-independent manner mediated by the CBP amino-terminal C/H1-containing domain. We propose that CBP may regulate aspects of EBV latency and reactivation by integrating cellular signals mediated by competitive interactions between C/H1, C/H3, and the Zta activation domain.


Subject(s)
DNA-Binding Proteins/metabolism , Herpesvirus 4, Human/physiology , Nuclear Proteins/metabolism , Trans-Activators/metabolism , Transcriptional Activation , Viral Proteins/metabolism , Virus Latency/physiology , Acetyltransferases/biosynthesis , Acetyltransferases/genetics , Animals , Binding Sites , CREB-Binding Protein , Cell Cycle Proteins/biosynthesis , Cell Cycle Proteins/genetics , DNA-Binding Proteins/genetics , E1A-Associated p300 Protein , Gene Expression Regulation, Viral , HeLa Cells , Herpesvirus 4, Human/growth & development , Histone Acetyltransferases , Humans , Mice , Nuclear Proteins/biosynthesis , Nuclear Proteins/genetics , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Trans-Activators/biosynthesis , Trans-Activators/genetics , Transcription Factors , Viral Proteins/genetics , Virus Activation , p300-CBP Transcription Factors
20.
Mol Cell Biol ; 21(2): 476-87, 2001 Jan.
Article in English | MEDLINE | ID: mdl-11134336

ABSTRACT

The transcriptional coactivator CREB binding protein (CBP) possesses intrinsic histone acetyltransferase (HAT) activity that is important for gene regulation. CBP binds to and cooperates with numerous nuclear factors to stimulate transcription, but it is unclear if these factors modulate CBP HAT activity. Our previous work showed that CBP interacts with the Epstein-Barr virus-encoded basic region zipper (b-zip) protein, Zta, and augments its transcriptional activity. Here we report that Zta strongly enhances CBP-mediated acetylation of nucleosomal histones. Zta stimulated the HAT activity of CBP that had been partially purified or immunoprecipitated from mammalian cells as well as from affinity-purified, baculovirus expressed CBP. Stimulation of nucleosome acetylation required the CBP HAT domain, the Zta DNA binding and transcription activation domain, and nucleosomal DNA. In addition to Zta, we found that two other b-zip proteins, NF-E2 and C/EBPalpha, strongly stimulated nucleosomal HAT activity. In contrast, several CBP-binding proteins, including phospho-CREB, JUN/FOS, GATA-1, Pit-1, and EKLF, failed to stimulate HAT activity. These results demonstrate that a subset of transcriptional activators enhance the nucleosome-directed HAT activity of CBP and suggest that nuclear factors may regulate transcription by altering substrate recognition and/or the enzymatic activity of chromatin modifying coactivators.


Subject(s)
Acetyltransferases/metabolism , DNA-Binding Proteins/metabolism , Nuclear Proteins/chemistry , Nuclear Proteins/metabolism , Nucleosomes/enzymology , Saccharomyces cerevisiae Proteins , Trans-Activators/chemistry , Trans-Activators/metabolism , Viral Proteins , Acetylation , Acetyltransferases/chemistry , Animals , Binding Sites , CCAAT-Enhancer-Binding Protein-alpha/metabolism , CREB-Binding Protein , Catalytic Domain , Cell Line , DNA/chemistry , DNA/genetics , DNA/metabolism , DNA-Binding Proteins/chemistry , Enzyme Activation , Erythroid-Specific DNA-Binding Factors , G-Box Binding Factors , GATA1 Transcription Factor , Histone Acetyltransferases , Histones/metabolism , Humans , NF-E2 Transcription Factor , NF-E2 Transcription Factor, p45 Subunit , Nucleosomes/genetics , Nucleosomes/metabolism , Protein Structure, Tertiary , Substrate Specificity , Transcription Factors/metabolism , Transcriptional Activation , Transfection
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