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1.
Br J Cancer ; 125(2): 255-264, 2021 07.
Article in English | MEDLINE | ID: mdl-34006924

ABSTRACT

BACKGROUND: Lower-grade gliomas (LGGs) show highly metabolic heterogeneity and adaptability. To develop effective therapeutic strategies targeting metabolic processes, it is necessary to identify metabolic differences and define metabolic subtypes. Here, we aimed to develop a classification system based on metabolic gene expression profile in LGGs. METHODS: The metabolic gene profile of 402 diffuse LGGs from the Cancer Genome Atlas (TCGA) was used for consensus clustering to determine robust clusters of patients, and the reproducibility of the classification system was evaluated in three Chinese Glioma Genome Atlas (CGGA) cohorts. Then, the metadata set for clinical characteristics, immune infiltration, metabolic signatures and somatic alterations was integrated to characterise the features of each subtype. RESULTS: We successfully identified and validated three highly distinct metabolic subtypes in LGGs. M2 subtype with upregulated carbohydrate, nucleotide and vitamin metabolism correlated with worse prognosis, whereas M1 subtype with upregulated lipid metabolism and immune infiltration showed better outcome. M3 subtype was associated with low metabolic activities and displayed good prognosis. Three metabolic subtypes correlated with diverse somatic alterations. Finally, we developed and validated a metabolic signature with better performance of prognosis prediction. CONCLUSIONS: Our study provides a new classification based on metabolic gene profile and highlights the metabolic heterogeneity within LGGs.


Subject(s)
Biomarkers, Tumor/metabolism , Brain Neoplasms/pathology , Gene Expression Profiling/methods , Gene Regulatory Networks , Glioma/pathology , Brain Neoplasms/genetics , Brain Neoplasms/metabolism , Carbohydrate Metabolism , Databases, Genetic , Gene Expression Regulation, Neoplastic , Glioma/genetics , Glioma/metabolism , Humans , Lipid Metabolism , Nucleotides/metabolism , Prognosis , Sequence Analysis, RNA , Survival Analysis , Vitamins/metabolism
2.
BMC Musculoskelet Disord ; 21(1): 59, 2020 Jan 30.
Article in English | MEDLINE | ID: mdl-32000749

ABSTRACT

BACKGROUND: Poplital artery transection injury is potentially catastrophic, or even life-threatening. Severe traumas, including open fracture, gunshot, stabs, and knee dislocation and complex fracture of proximal tibia or distal femur, are the common causes of high rate of amputation due to popliteal artery trauma. No report mentions vascular injury associated with minimally displaced tibial plateau fracture in adult. CASE PRESENTATION: A 30-year-old male presented with popliteal artery transection injury associated with minimally displaced tibial plateau fracture. He presented to emergency department, 6 h after fall from ground into a 1-m height hole. Physical examination suggested acute ischemia, with signs of paleness, coldness, anesthesia, hemorrhagic bullae below the right knee level. There was severe swelling and ecchymosis in popliteal fossa and around the leg with significant calf tenderness and pedal edema. Tibialis posterior, dorsalis pedis, and popliteal arterial pulses were not palpable. Radiograph suggested minimally displaced tibial plateau fracture with no evidence of knee dislocation. The patient was taken up for emergency surgery after consultation with vascular surgeon. During the closed reduction external fixation and compartment decompression, popliteal artery trunk was found transected and end-to-end repair was performed. During the post-operational period, no complication was developed and the patient was followed-up for 1 year. At the one-year follow-up, he acquired good stability of his right knee with full range of motion. CONCLUSION: Significant swelling and ecchymosis should alert the surgeons to the possibility of vascular injury in knee joint injury, even if there is no fracture or dislocation, or fracture is minimally displaced.


Subject(s)
Popliteal Artery/injuries , Popliteal Artery/surgery , Tibial Fractures/complications , Tibial Fractures/surgery , Adult , Decompression, Surgical/methods , External Fixators , Humans , Male , Popliteal Artery/diagnostic imaging , Tibial Fractures/diagnostic imaging
3.
Genome Res ; 24(11): 1765-73, 2014 Nov.
Article in English | MEDLINE | ID: mdl-25135958

ABSTRACT

Studies of gene rearrangements and the consequent oncogenic fusion proteins have laid the foundation for targeted cancer therapy. To identify oncogenic fusions associated with glioma progression, we catalogued fusion transcripts by RNA-seq of 272 gliomas. Fusion transcripts were more frequently found in high-grade gliomas, in the classical subtype of gliomas, and in gliomas treated with radiation/temozolomide. Sixty-seven in-frame fusion transcripts were identified, including three recurrent fusion transcripts: FGFR3-TACC3, RNF213-SLC26A11, and PTPRZ1-MET (ZM). Interestingly, the ZM fusion was found only in grade III astrocytomas (1/13; 7.7%) or secondary GBMs (sGBMs, 3/20; 15.0%). In an independent cohort of sGBMs, the ZM fusion was found in three of 20 (15%) specimens. Genomic analysis revealed that the fusion arose from translocation events involving introns 3 or 8 of PTPRZ and intron 1 of MET. ZM fusion transcripts were found in GBMs irrespective of isocitrate dehydrogenase 1 (IDH1) mutation status. sGBMs harboring ZM fusion showed higher expression of genes required for PIK3CA signaling and lowered expression of genes that suppressed RB1 or TP53 function. Expression of the ZM fusion was mutually exclusive with EGFR overexpression in sGBMs. Exogenous expression of the ZM fusion in the U87MG glioblastoma line enhanced cell migration and invasion. Clinically, patients afflicted with ZM fusion harboring glioblastomas survived poorly relative to those afflicted with non-ZM-harboring sGBMs (P < 0.001). Our study profiles the shifting RNA landscape of gliomas during progression and reveled ZM as a novel, recurrent fusion transcript in sGBMs.


Subject(s)
Brain Neoplasms/genetics , Glioblastoma/genetics , Glioma/genetics , Oncogene Proteins, Fusion/genetics , Proto-Oncogene Proteins c-met/genetics , Receptor-Like Protein Tyrosine Phosphatases, Class 5/genetics , Adolescent , Adult , Aged , Antineoplastic Agents, Alkylating , Blotting, Western , Brain Neoplasms/pathology , Brain Neoplasms/secondary , Cell Line, Tumor , Chemoradiotherapy , Dacarbazine/analogs & derivatives , Dacarbazine/therapeutic use , Female , Gene Expression Regulation, Neoplastic , Glioblastoma/secondary , Glioma/pathology , Glioma/therapy , HEK293 Cells , Humans , Introns/genetics , Male , Middle Aged , Oncogene Proteins, Fusion/metabolism , Proto-Oncogene Proteins c-met/metabolism , Receptor-Like Protein Tyrosine Phosphatases, Class 5/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Sequence Analysis, RNA , Temozolomide , Translocation, Genetic , Young Adult
4.
J Neurooncol ; 134(2): 397-405, 2017 Sep.
Article in English | MEDLINE | ID: mdl-28752501

ABSTRACT

Increasing evidence suggests that ion channels not only regulate electric signaling in excitable cells but also play important roles in the development of human cancer. However, the roles of ion channels in glioma remain controversial. We systematically analyzed the expression patterns of ion channel genes in a cohort of Chinese patients with glioma using whole-genome mRNA expression profiling. First, a molecular signature comprising 47 ion channel genes (IC47) was identified using Spearman's rank correlation test conducted between tumor grade and gene expression. We assigned a risk score based on IC47 to each glioma patient. We demonstrated that the risk score effectively predicted overall survival in glioma patients. Next, we screened IC47 in different molecular glioma subtypes. IC47 showed a Mesenchymal subtype and wild-type IDH1 preference. Gene ontology (GO) analysis and gene set variation analysis (GSVA) for the functional annotation of IC47 showed that patients with high-risk scores tended to exhibit the decreased expression of proteins associated with the apoptosis and cell adhesion, and higher expression of proteins associated with the cell cycle and cell proliferation. These results suggest that ion channel gene expression could improve the subtype classification in gliomas at the molecular level. The findings in the present study have been validated in two independent cohorts.


Subject(s)
Brain Neoplasms/genetics , Glioma/genetics , Ion Channels/genetics , Biomarkers, Tumor/genetics , Biomarkers, Tumor/metabolism , Brain Neoplasms/metabolism , Brain Neoplasms/pathology , Brain Neoplasms/surgery , Follow-Up Studies , Gene Expression Profiling , Genetic Association Studies , Genetic Testing , Glioma/metabolism , Glioma/pathology , Glioma/surgery , Humans , Ion Channels/metabolism , Isocitrate Dehydrogenase/genetics , Microarray Analysis , Mutation , Neoplasm Grading , Prognosis , RNA, Messenger/metabolism
5.
Environ Sci Technol ; 50(8): 4203-11, 2016 Apr 19.
Article in English | MEDLINE | ID: mdl-27008063

ABSTRACT

Tetrabromobisphenol-A/S (TBBPA/S) analogs have raised substantial concern because of their adverse effects and potential bioaccumulative properties, such as TBBPA bis(allyl ether) (TBBPA-BAE) and TBBPA bis(2,3-dibromopropyl ether) (TBBPA-BDBPE). In this study, a comprehensive method for simultaneous determination of TBBPA/S and nine novel analogs, including TBBPA-BAE, TBBPA-BDBPE, TBBPS-BDBPE, TBBPA mono(allyl ether) (TBBPA-MAE), TBBPA mono(2-bromoallyl ether) (TBBPA-MBAE), TBBPA mono(2,3-dibromopropyl ether) (TBBPA-MDBPE), TBBPS-MAE, TBBPS-MBAE, and TBBPS-MDBPE in biological samples was developed. The distribution patterns and trophic transfer properties of TBBPA/S and analogs in various biological samples collected from the Chinese Bohai Sea were then studied in detail. For the first time, TBBPA-MBAE and TBBPS-BDBPE were detected in biological samples and TBBPA-MBAE was identified as a byproduct. The concentrations of TBBPA and analogs ranged from ND (not detected or below the method detection limit) to 2782.8 ng/g lipid weight (lw), and for TBBPS and analogs ranged from ND to 927.8 ng/g lw. High detection frequencies (>86%) for TBBPA, TBBPS and TBBPA-MAE, TBBPA-MDBPE, TBBPS-MAE, TBBPS-MBAE, and TBBPS-MDBPE were obtained. Meanwhile, TBBPA, TBBPS, and these five analogs displayed trophic dilution tendencies due to significantly negative correlations between trophic levels and lipid-corrected concentrations together with the trophic magnification factors (from 0.31 to 0.55). The results also indicated the novel TBBPA-MAE, TBBPA-MBAE, TBBPA-MDBPE, TBBPS-MAE, TBBPS-MBAE, and TBBPS-MDBPE could be generated not only as byproducts, but also as the probable transformation products of commercial TBBPA/S derivatives.


Subject(s)
Food Chain , Polybrominated Biphenyls/analysis , Water Pollutants, Chemical/analysis , Animals , Fishes , Invertebrates/chemistry , Limit of Detection , Oceans and Seas , Polybrominated Biphenyls/chemistry , Spectrometry, Mass, Electrospray Ionization/methods , Tandem Mass Spectrometry/methods , Water Pollutants, Chemical/chemistry , Zooplankton/chemistry
6.
Mol Biol Rep ; 41(3): 1623-30, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24398552

ABSTRACT

The gene encoding cathepsin D of silkworm, Bombyx mori (BmCatD) is specifically expressed in the larval fat body and pupal gut, and plays an important role in the programmed cell death during metamorphosis. To identify element involved in this transcription-dependent spatial restriction, truncation and deletion of the 5' terminal from the BmCatD promoter were conducted in vivo. The recombinant AcMNPV vector (Autographa californica multiple nucleopolyhedrovirus) with a dual-luciferase quantitative assay system was used as the transfer. A 289 bp DNA sequence (-1,214 to -925) upstream of the transcriptional start site is found to be responsible for promoting tissue-specific transcription. Further analysis of a series of deletion within the 289 bp region of overlapping deletion showed that a 33 bp region (-1,071 to -1,038) sequence suppresses the ectopic expression of the BmCatD promoter. These results suggest that this 33 bp region could function as a promoter element in the tissue-specificity expression.


Subject(s)
Bombyx/genetics , Cathepsin D/genetics , Promoter Regions, Genetic , Animals , Cathepsin D/biosynthesis , Gene Expression Regulation, Developmental , Larva/genetics , Organ Specificity/genetics
7.
Int J Biol Macromol ; 233: 123599, 2023 Apr 01.
Article in English | MEDLINE | ID: mdl-36773866

ABSTRACT

To prompt the application of the chitosan (CS)-Aspergillus oryzae lipase (AOL) complex in the construction of novel biphasic catalysis medium, its Pickering emulsion stabilization ability as well as adsorption behavior in the oil-water interface were investigated and the stability of resultant emulsion was evaluated. The results indicated that the CS-AOL complex assembled in mass ratio 1:5 was an effective Pickering stabilizer and up to 90 % AOL could be retained in the emulsion interface. Quartz crystal microbalance with dissipation monitoring suggested that the CS-AOL complex spontaneously absorbed to oil-water interface; absorption dynamics analysis revealed that the adsorption was driven by diffusion accompanied by rapid structural rearrangement; while interfacial dilatational rheology demonstrated the formation of an elastic film in the oil-water interface. The Pickering emulsions were pseudoplastic and that in oil fraction 0.6 exhibited the elastic behavior in contrast to the viscous behavior in oil fractions 0.2 and 0.4. The Pickering emulsion exhibited excellent stability against storage for up to 28 d, pHs 2.0-12.0, heating at 25-90 °C, and up to 500 mmol/L NaCl, and the corresponding interfacial AOL retentions exceeded 80 % during exposure to these conditions. Hence, the CS-AOL complex could be used as a stabilizer to construct Pickering emulsion-based biphasic catalysis systems.


Subject(s)
Aspergillus oryzae , Chitosan , Chitosan/chemistry , Emulsions/chemistry , Adsorption , Excipients , Water/chemistry , Particle Size
8.
Lipids Health Dis ; 11: 168, 2012 Dec 05.
Article in English | MEDLINE | ID: mdl-23216709

ABSTRACT

BACKGROUND: Administration of androgens decreases plasma concentrations of high-density lipid cholesterol (HDL-C). However, the mechanisms by which androgens mediate lipid metabolism remain unknown. This present study used HepG2 cell cultures and ovariectomized C57BL/6 J mice to determine whether apolipoprotein M (ApoM), a constituent of HDL, was affected by dihydrotestosterone (DHT). METHODS: HepG2 cells were cultured in the presence of either DHT, agonist of protein kinase C (PKC), phorbol-12-myristate-13-acetate (PMA), blocker of androgen receptor flutamide together with different concentrations of DHT, or DHT together with staurosporine at different concentrations for 24 hrs. Ovariectomized C57BL/6 J mice were treated with DHT or vehicle for 7d or 14d and the levels of plasma ApoM and livers ApoM mRNA were measured. The mRNA levels of ApoM, ApoAI were determined by real-time RT-PCR. ApoM and ApoAI were determined by western blotting analysis. RESULTS: Addition of DHT to cell culture medium selectively down-regulated ApoM mRNA expression and ApoM secretion in a dose-dependent manner. At 10 nM DHT, the ApoM mRNA levels were about 20% lower than in untreated cells and about 40% lower at 1000 nM DHT than in the control cells. The secretion of ApoM into the medium was reduced to a similar extent. The inhibitory effect of DHT on ApoM secretion was not blocked by the classical androgen receptor blocker flutamide but by an antagonist of PKC, Staurosporine. Agonist of PKC, PMA, also reduced ApoM. At 0.5 µM PMA, the ApoM mRNA levels and the secretion of ApoM into the medium were about 30% lower than in the control cells. The mRNA expression levels and secretion of another HDL-associated apolipoprotein AI (ApoAI) were not affected by DHT. The levels of plasma ApoM and liver ApoM mRNA of DHT-treated C57BL/6 J mice were lower than those of vehicle-treated mice. CONCLUSIONS: DHT directly and selectively down-regulated the level of ApoM mRNA and the secretion of ApoM by protein kinase C but independently of the classical androgen receptor.


Subject(s)
Apolipoproteins , Dihydrotestosterone , Lipid Metabolism/drug effects , Lipocalins , Protein Kinase C/metabolism , Animals , Apolipoproteins/biosynthesis , Apolipoproteins/blood , Apolipoproteins/metabolism , Apolipoproteins M , Cholesterol, HDL/metabolism , Dihydrotestosterone/metabolism , Dihydrotestosterone/pharmacology , Down-Regulation , Gene Expression/drug effects , Hep G2 Cells , Humans , Lipocalins/biosynthesis , Lipocalins/blood , Lipocalins/metabolism , Male , Mice , Mice, Inbred C57BL , Phorbol Esters/pharmacology , Protein Kinase C/antagonists & inhibitors , RNA, Messenger/biosynthesis , RNA, Messenger/metabolism , Receptors, Androgen/metabolism
9.
Food Chem ; 385: 132689, 2022 Aug 15.
Article in English | MEDLINE | ID: mdl-35303653

ABSTRACT

Coacervation of the lipase from Aspergillus oryzae (AOL) with chitosan was a feasible way to fabricate lipase-loaded particles and the optimum conditions were phase separation pH 5.5, chitosan to AOL mass ratio 1:5, and temperature 25 °C in the absence of NaCl, which conferred an AOL loading efficiency of up to 95.48% and activity recovery of 69.60%. The AOL-chitosan coacervates were highly porous and more susceptible to weight loss upon heating. Coacervation with chitosan increased the activity of AOL and shifted its optimum pH from 7.0 to 6.0, but exerted no effect on its optimum temperature (45 °C). Thermal deactivation kinetics analysis revealed that the coacervated AOL was more thermal stable, while the Michaelis-Menten kinetics analysis indicated that coacervation with chitosan increased the Vmax of AOL by 2.4 folds, but decreased its substrate affinity by 3.6 folds. Hence, the AOL-chitosan coacervates are potential in the construction of Pickering emulsion-based lipase catalysis systems.


Subject(s)
Aspergillus oryzae , Chitosan , Aspergillus oryzae/metabolism , Hydrogen-Ion Concentration , Kinetics , Lipase/metabolism
10.
Guang Pu Xue Yu Guang Pu Fen Xi ; 30(4): 1061-4, 2010 Apr.
Article in Zh | MEDLINE | ID: mdl-20545162

ABSTRACT

Smoke detection is very important for preventing forest-fire in the fire early process. Because the traditional technologies based on video and image processing are easily affected by the background dynamic information, three limitations exist in these technologies, i. e. lower anti-interference ability, higher false detection rate and the fire smoke and water fog being not easily distinguished. A novel detection method for detecting smoke based on the multispectral image was proposed in the present paper. Using the multispectral digital imaging technique, the multispectral image series of fire smoke and water fog were obtained in the band scope of 400 to 720 nm, and the images were divided into bins. The Euclidian distance among the bins was taken as a measurement for showing the difference of spectrogram. After obtaining the spectral feature vectors of dynamic region, the regions of fire smoke and water fog were extracted according to the spectrogram feature difference between target and background. The indoor and outdoor experiments show that the smoke detection method based on multispectral image can be applied to the smoke detection, which can effectively distinguish the fire smoke and water fog. Combined with video image processing method, the multispectral image detection method can also be applied to the forest fire surveillance, reducing the false alarm rate in forest fire detection.

11.
Res Vet Sci ; 128: 153-161, 2020 Feb.
Article in English | MEDLINE | ID: mdl-31809972

ABSTRACT

Hen eggs (HEs) provide valuable nutrients for humans, including proteins, carbohydrates, lipids and vitamins. Recent studies revealed a number of novel egg-derived proteins/peptides (EDPs), and EDPs may play a crucial role in food industry and medical therapy. First, these EDPs were purified from the enzyme-catalyzed hydrolysates of egg proteins and were characterized by biochemical assays such as gel electrophoresis, HPLC, mass spectrometry, proteomic and peptideomic analysis, etc. Second, some EDPs can be used as nontoxic bio-preservatives and functional nutraceuticals for replacing harmful sodium nitrite, inhibiting foodborne pathogens, promoting metal-ion absorption and improving meat-product quality, and these new features will be widely used in the field of food production. Third, novel medical properties of EDPs comprise anti-oxidative, anti-microbial, anti-inflammatory and anti-nociceptive activities, which will benefit prevention of cardiovascular diseases, cancers, diabetic mellitus, immune disorders, etc. In summary, this review gives a real insight into the novel nutritional, biological and medical functions of EDPs, predictably facilitating the applications of EDPs in production of nutritive supplements, functional nutraceuticals and therapeutic medicines.


Subject(s)
Chickens , Egg Proteins , Eggs , Animals , Biological Products , Female , Humans , Peptides , Precision Medicine , Proteomics , Vitamins
12.
Metabol Open ; 3: 100014, 2019 Sep.
Article in English | MEDLINE | ID: mdl-32812930

ABSTRACT

OBJECTIVE: A novel genetic and molecular basis of nonalcoholic fatty liver disease (NAFLD) was explored. STUDY DESIGN: A 38-year-old male, who has no bad living and dietary habits, was diagnosed as NAFLD. The potential pathogenic role of Pin1 was evaluated by enzyme-linked immunosorbent (ELISA) assay and single nucleotide polymorphism (SNP) sequencing. RESULTS: ELISA determined a six-time higher concentration of plasma Pin1 compared to our previous data. Nine PIN1 SNPs were sequenced and classified according to their NAFLD-pathogenic risks, suggesting that rs2233678 and rs2287839 may be the most important genotypes that result in Pin1 overexpression and NAFLD development. CONCLUSION: In summary, this work explores a novel basis for early-onset NAFLD and highlights that elevated plasma Pin1 may predict NAFLD risk at early stage. Hypothetically, inhibiting Pin1 may benefit NAFLD prevention in the future.

13.
Mitochondrial DNA B Resour ; 4(2): 2811-2812, 2019 Sep 06.
Article in English | MEDLINE | ID: mdl-33365739

ABSTRACT

Here, we describe the first complete mitochondrial genome of Yao silkworm, a unique silkworm resource native at Guangxi, China. This circular molecule is 15,656 bp long and contains the typical set of 37 genes (13 protein-coding genes, two ribosomal RNA genes, and 22 transfer RNA genes) and one non-coding A + T-rich region of 494 bp long. The genome organization and gene arrangement are identical to those observed in all available Bombyx mori strains. The phylogenetic tree inferred from Bayesian inference provides a molecular evidence that Yao silkworm belongs to the domestic silkworm (B. mori), rather than a novel silkworm species.

14.
Chin Med J (Engl) ; 132(17): 2073-2078, 2019 Sep 05.
Article in English | MEDLINE | ID: mdl-31261204

ABSTRACT

BACKGROUND: Rapid visual acuity (VA) decline was a common complaint in patients with sellar/suprasellar germinoma. In our hospital, 3.4 Gy/2f of emergency irradiation was applied to save patient VA and enable subsequent chemoradiotherapy. This study aimed to investigate the efficacy of emergency irradiation with 3.4 Gy/2f in patients with sellar/suprasellar germinoma who had rapid VA decline. METHODS: From January 2014 to December 2017, 33 patients with sellar/suprasellar germinoma who complained of VA decline within 3 months received 3.4 Gy/2f of emergency irradiation in Beijing Tiantan Hospital. The best-corrected VA (BCVA) and mean deviation (MD) were measured. Correlations between visual function change and clinical factors, including age at diagnosis, duration of VA decline, extent of tumor regression, serum level of tumor markers, were analyzed. RESULTS: Among 33 patients with sellar/suprasellar germinoma, the median diameter and volume of sellar/suprasellar lesions were 32 mm (range: 5-55 mm) and 12.9 cm (range 0.6-58.5 cm), respectively. Data on pre- and post-emergency-irradiation BCVA were obtained in 32 patients. For the right eyes, BCVA was improved in 23 patients (71.9%), unchanged in 7 (21.9%), and worsened in 2 (6.2%); and for the left eyes, these numbers were 27 (84.4%), 4 (12.5%), and 1 (3.1%), respectively. In terms of the logarithm of the minimum angle of resolution (logarithm of the minimum angle of resolution = Log (1/BCVA) score, the improvement was significant in both eyes (P < 0.001). In terms of MD, six patients had paired data and the improvement was marginal in the right eyes (P = 0.068) and significant in the left eyes (P = 0.043). However, no clinical factor was found to have correlation with visual function improvement. CONCLUSION: In sellar/suprasellar germinoma patients with VA decline, 3.4 Gy/2f of emergency irradiation was effective in improving visual function.


Subject(s)
Germinoma/drug therapy , Germinoma/therapy , Adolescent , Adult , Child , Child, Preschool , Chorionic Gonadotropin/metabolism , Drug Therapy , Humans , Radiotherapy , Retrospective Studies , Visual Acuity/drug effects , Visual Acuity/physiology , Visual Acuity/radiation effects , Young Adult
15.
CNS Neurosci Ther ; 25(9): 965-975, 2019 09.
Article in English | MEDLINE | ID: mdl-31180187

ABSTRACT

BACKGROUND: Glioma is the most common and aggressive type of primary brain tumor in adults. Although radiotherapy and chemotherapy are used in the treatment of glioma, survival remains unsatisfactory. Chemoresistance is one of the primary reasons for the poor prognosis of glioma. Several studies have demonstrated that glioma stem cells (GSC) may be one of the reasons for chemoresistance. In this article, we attempt to search for a new biomarker related to GSC and chemoresistance in glioma. METHODS: We used three datasets (GSE23806, COSMIC, and CGGA) to search for the genes related to GSC, temozolomide (TMZ) resistance, and overall survival. The selected gene was investigated with respect to the relationship between mRNA levels and clinical characteristics in the CGGA and TCGA dataset. Gene ontology (GO) analysis was used for bioinformatics analysis. Kaplan-Meier survival analysis and Cox regression analysis were used for survival analysis. RESULTS: The transmembrane protein 71 (TMEM71) gene was selected for further research. TMEM71 was highly expressed in GSCs and TMZ-resistant cells. The TMEM71 mRNA levels increased with increasing grades of glioma. In IDH-wild-type and MGMT-unmethylated samples, TMEM71 was overexpressed. The TMEM71 transcript levels were also increased significantly in mesenchymal subtype gliomas. GO analysis demonstrated that TMEM71 was related to the immune and inflammatory responses, cell proliferation, cell migration, chemotaxis, and the response to drugs. Specifically, PD-1, PD-L1, TIM-3, and B7-H3 were tightly associated with TMEM71 expression. This result indicates that TMEM71 may play an important role in the immune response. More importantly, high expression of TMEM71 was correlated with short survival time in both glioma and glioblastoma patients. CONCLUSION: In summary, TMEM71 expression was increased in GBM and associated with immune response. Our study suggests that TMEM71 may function as an oncogene and serve as a new effective therapeutic target for the treatment of glioma.


Subject(s)
Biomarkers, Tumor/biosynthesis , Brain Neoplasms/metabolism , Gene Expression Regulation, Neoplastic , Glioma/metabolism , Membrane Proteins/biosynthesis , Transcription, Genetic/physiology , Biomarkers, Tumor/genetics , Brain Neoplasms/genetics , Cell Line, Tumor , Databases, Genetic , Glioma/genetics , Humans , Membrane Proteins/genetics
16.
Exp Anim ; 57(2): 139-43, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18421177

ABSTRACT

Shin Nippon Biomedical Laboratories, Ltd. (SNBL) imported and quarantined 3,148 cynomolgus monkeys (aged 2.5 to 6.5 years) from China in 2002. The hematology and blood biochemistry data obtained from these monkeys on Day 32 of quarantine were analyzed separately by sex [2,890 animals in which no abnormalities were observed during the 35-day quarantine period (normal group), and 258 animals which exhibited diarrhea 1 to 12 times (diarrhea group)]. The values obtained for all parameters were within the normal range (mean +/- SD), and no significant abnormalities were noted in either sex. The clinical pathology data from 11 animals (6 males and 5 females) exhibiting diarrhea repeatedly (10 to 12 times) were statistically analyzed, and significant differences were noted in PLT and ALP in both sexes. The PLT values of these animals were within the normal group mean +/- 2 SD, and were considered within the normal range. A significant difference was noted in some individual ALP values (males: Nos. 2 and 3, females: Nos. 1, 3, and 4). The clinical pathology data obtained from the normal group in this study basically correspond to the widely reported results already obtained from healthy cynomolgus monkeys, from which it can be concluded that the cynomolgus monkeys from China were generally healthy and presenting no particular abnormality. The clinical pathology data from the normal group will serve as valuable baseline data for experimenters using cynomolgus monkeys.


Subject(s)
Diarrhea/etiology , Macaca fascicularis , Monkey Diseases/etiology , Pathology, Clinical , Quarantine , Alkaline Phosphatase/blood , Animal Husbandry , Animals , Blood Chemical Analysis , China , Diarrhea/epidemiology , Environment , Fatigue , Female , Hematologic Tests , Male , Monkey Diseases/epidemiology , Platelet Count , Stress, Physiological
17.
Acta Cardiol ; 63(2): 213-9, 2008 Apr.
Article in English | MEDLINE | ID: mdl-18468203

ABSTRACT

OBJECTIVE: Myocardial ischaemia/reperfusion (MI/R) injury is characterized by metabolic and ultrastructural changes, which lead to irreversible injury. Several mechanisms have been postulated for the pathogenesis of MI/R injury although little is known regarding the role of myocardial gene expression. METHODS AND RESULTS: In this study, suppression subtractive hybridization (SSH) was employed to systematically isolate and screen the differentially expressed genes in the MI/R injury rat model. The characteristics of these specific genes were analysed using bioinformatics. Our results showed that among the 119 identified genes, 54 genes were expressed at higher levels and 65 genes were at lower levels compared with the control group. CONCLUSIONS: These genes are closely associated with energy metabolism, iron transport, signalling transduction and may provide important clues for the elucidation of the mechanisms of MI/R injury. Our results further indicated that myocardial injury is likely the result of summation of functional impairment of multiple genes rather than the result of damage to a single critical gene.


Subject(s)
Cell Cycle Proteins/genetics , Gene Expression Profiling/methods , Gene Expression , Myocardial Reperfusion Injury/genetics , RNA/genetics , Animals , Disease Models, Animal , Male , Myocardial Ischemia/diagnosis , Myocardial Ischemia/genetics , Myocardial Reperfusion Injury/diagnosis , Rats , Rats, Sprague-Dawley , Reverse Transcriptase Polymerase Chain Reaction
18.
Chin Med J (Engl) ; 131(10): 1206-1213, 2018 May 20.
Article in English | MEDLINE | ID: mdl-29722340

ABSTRACT

BACKGROUND: The role of postradiation systemic therapy in non-small cell lung cancer (NSCLC) patients with brain metastasis (BM) was controversial. Thus, we explored the role of Radiation Therapy Oncology Group recursive partitioning analysis (RTOG-RPA) and graded prognostic assessment (GPA) in identifying population who may benefit from postradiation systemic therapy. METHODS: The clinical data of NSCLC patients with documented BM from August 2007 to April 2015 of two hospitals were studied retrospectively. Cox regression was used for multivariate analysis. Survival of patients with or without postradiation systemic therapy was compared in subgroups stratified according to RTOG-RPA or GPA. RESULTS: Of 216 included patients, 67.1% received stereotactic radiosurgery (SRS), 24.1% received whole-brain radiation therapy (WBRT), and 8.8% received both. After radiotherapy, systemic therapy was administered in 58.3% of patients. Multivariate analysis found that postradiation systemic therapy (yes vs. no) (hazard ratio [HR] = 0.361, 95% confidence interval [CI] = 0.202-0.648, P = 0.001), radiation technique (SRS vs. WBRT) (HR = 0.462, 95% CI = 0.238-0.849, P = 0.022), extracranial metastasis (yes vs. no) (HR = 3.970, 95% CI = 1.757-8.970, P = 0.001), and Karnofsky performance status (<70 vs. ≥70) (HR = 5.338, 95% CI = 2.829-10.072, P < 0.001) were independent factors for survival. Further analysis found that subsequent tyrosine kinase inhibitor (TKI) therapy could significantly reduce the risk of mortality of patients in RTOG-RPA Class II (HR = 0.411, 95% CI = 0.183-0.923, P = 0.031) or with a GPA score of 1.5-2.5 (HR = 0.420, 95% CI = 0.182-0.968, P = 0.042). However, none of the subgroups stratified according to RTOG-RPA or GPA benefited from the additional conventional chemotherapy. CONCLUSION: RTOG-RPA and GPA may be useful to identify beneficial populations in NSCLC patients with BM if TKIs were chosen as postradiation systemic therapy.


Subject(s)
Carcinoma, Non-Small-Cell Lung/pathology , Lung Neoplasms/pathology , Adult , Aged , Aged, 80 and over , Brain Neoplasms/pathology , Brain Neoplasms/surgery , Carcinoma, Non-Small-Cell Lung/surgery , Female , Humans , Lung Neoplasms/surgery , Male , Middle Aged , Radiosurgery/methods , Treatment Outcome
19.
Ying Yong Sheng Tai Xue Bao ; 29(4): 1140-1146, 2018 Apr.
Article in Zh | MEDLINE | ID: mdl-29726222

ABSTRACT

In a field experiment with three levels of irrigation, i.e., CI, DI75 and DI50(100%, 75% and 50% full irrigation) and four levels of shade, i.e., T100, T70, T55 and T40(100%, 70%, 55% and 40% natural radiation), the effects of irrigation and shading levels on growth, yield and quality of Coffea arabica were examined. The comprehensive benefit evaluation model was established under different irrigation and shading levels. The results showed that DI75 treatment increased the contents of fat and chlorogenic acid in dry bean by 6.0% and 10.2%, DI50 treatment significantly increased the content of caffeine of dry bean, but reduced water use efficiency. Compared with T100, T70 treatment increased the yield of dry bean and water use efficiency by 27.2% and 26.8%, respectively, and increased total sugar and chlorogenic acid content in dry bean by 6.3% and 5.5%. T55 and T40 treatments significantly reduced the yield of dry bean, water use efficiency, and the contents of caffeine and chlorogenic acid of dry bean. Compared with CIT100, DI75T70 treatment increased dry bean yield and water use efficiency by 28.0% and 44.5%, and increased the contents of total sugar, protein, fat and chlorogenic acid of dry bean by 12.2%, 14.7%, 6.6% and 10.0%, respectively, but reduced the concentration of caffeine by 8.3%. The comprehensive benefit of yield and quality of DI75T70 treatment (75% full irrigation, 70% natural radiation) was the best, which could implement good quality and proper yield of C. arabica.


Subject(s)
Agricultural Irrigation , Coffea , Chlorogenic Acid , Water
20.
Ying Yong Sheng Tai Xue Bao ; 28(12): 4034-4042, 2017 Dec.
Article in Zh | MEDLINE | ID: mdl-29696900

ABSTRACT

The effects of periodic rewatering after drought stress and nitrogen fertilizer on growth, yield, photosynthetic characteristics of leaves and water and nitrogen productivity of Coffea arabica (Katim P7963) were studied under different nitrogen application levels in 2.5 consecutive years. Irrigation (periodic rewatering after drought stress) and nitrogen were designed as two factors, with four modes of irrigation, namely, full irrigation (IF-F: 100%ET0+100%ET0, ET0 was reference crop evapotranspiration), rewatering after light drought stress (IL-F: 80%ET0+100%ET0), rewatering after moderate drought stress (IM-F: 60%ET0+100%ET0) and rewatering after severe drought stress (IS-F: 40%ET0+100%ET0), and three levels of nitrogen, namely, high nitrogen (NH: 750 kg N·hm-2 each time), middle nitrogen (NM: 500 kg N·hm-2 each time), low nitrogen (NL: 250 kg N·hm-2 each time), and nitrogen was equally applied for 4 times. The results showed that irrigation and nitrogen had significant effect on plant height, stem diameter, yield and water and nitrogen productivity of C. arabica, and plant height and stem diameter showed S-curve with the day ordinal number, and leaf photosynthesis decreased significantly under drought stress but most photosynthesis index recovered somewhat after rewatering. Compared with IF-F, IL-F increased dry bean yield by 6.9%, while IM-F and IS-F decreased dry bean yield by 15.2% and 38.5%, respectively; IL-F and IM-F increased water use efficiency by 18.8% and 6.0%, respectively, while IS-F decreased water use efficiency by 12.1%; IL-F increased nitrogen partial productivity by 6.1%, while IM-F and IS-F decreased nitrogen partial productivity by 14.0% and 36.0%, respectively. Compared with NH, NM increased dry bean yield and water use efficiency by 20.9% and 19.3%, while NL decreased dry bean yield and water use efficiency by 42.4% and 41.9%, respectively; NM and NL increased nitrogen partial productivity by 81.4% and 72.9%, respectively. Compared with IF-FNH, IL-FNM increased dry bean yield, water use efficiency and nitrogen partial productivity by 37.6%, 52.9% and 106.4%, respectively. Regression analysis showed that the yield of dry bean was the maximum (2362 kg·hm-2) when the irrigation amount was 318 mm and the nitrogen application amount was 583 kg·hm-2; the water use efficiency was the maximum (0.78 kg·m-3) when the irrigationamount was 295 mm and the nitrogen application amount was 584 kg·hm-2, that's to say when yield of dry bean and water use efficiency reach the maximum value at the same time, the combination was the closest to IL-FNM. Therefore, the best combination of water and nitrogen model for C. arabica was IL-FNM.


Subject(s)
Droughts , Fertilizers , Nitrogen , Coffea , Photosynthesis , Plant Leaves , Water
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