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1.
Phys Chem Chem Phys ; 21(27): 14775-14785, 2019 Jul 10.
Article in English | MEDLINE | ID: mdl-31225557

ABSTRACT

Polymerized ionic liquids (PolyILs) are promising materials for applications in electrochemical devices spanning from fuel cells to capacitors and batteries. In principle, PolyILs have a competitive advantage over traditional electrolytes in being single ion conductors and thus enabling a transference number close to unity. Despite this perceived advantage, surprisingly low room temperature ionic conductivities measured in the lab raise an important fundamental question: how does the molecular structure mediate conductivity? In this work, wide-angle X-ray scattering (WAXS), vibrational sum frequency generation (vSFG), and density functional theory (DFT) calculations were used to study the bulk and interfacial structure of PolyILs, while broad band dielectric spectroscopy (BDS) was used to probe corresponding dynamics and conductive properties for a series of the PolyIL samples with tunable chemistries and structures. Our results reveal that the size of the mobile anions has a tremendous impact on chain packing in PolyILs that wasn't addressed previously. Larger mobile ions tend to create a well-packed structure, while smaller ions frustrate chain packing. The magnitude of these changes and level of structural heterogeneity are shown to depend on the chemical functionality and flexibility of studied PolyILs. Furthermore, these experimental and computational results provide new insight into the correlation between conductivity and structure in PolyILs, suggesting that structural heterogeneity helps to reduce the activation energy for ionic conductivity in the glassy state.

2.
Opt Lett ; 43(9): 2038-2041, 2018 May 01.
Article in English | MEDLINE | ID: mdl-29714740

ABSTRACT

We describe a new approach that expands the utility of vibrational sum-frequency generation (vSFG) spectroscopy using shaped near-infrared (NIR) laser pulses. We demonstrate that arbitrary pulse shapes can be specified to match experimental requirements without the need for changes to the optical alignment. In this way, narrowband NIR pulses as long as 5.75 ps are readily generated, with a spectral resolution of about 2.5 cm-1, an improvement of approximately a factor of 3 compared to a typical vSFG system. Moreover, the utility of having complete control over the NIR pulse characteristics is demonstrated through nonresonant background suppression from a metallic substrate by generating an etalon waveform in the pulse shaper. The flexibility afforded by switching between arbitrary NIR waveforms at the sample position with the same instrument geometry expands the type of samples that can be studied without extensive modifications to existing apparatuses or large investments in specialty optics.

3.
J Am Chem Soc ; 138(8): 2488-91, 2016 Mar 02.
Article in English | MEDLINE | ID: mdl-26866808

ABSTRACT

Strain is known to greatly influence low-temperature oxygen electrocatalysis on noble metal films, leading to significant enhancements in bifunctional activity essential for fuel cells and metal-air batteries. However, its catalytic impact on transition-metal oxide thin films, such as perovskites, is not widely understood. Here, we epitaxially strain the conducting perovskite LaNiO3 to systematically determine its influence on both the oxygen reduction and oxygen evolution reaction. Uniquely, we found that compressive strain could significantly enhance both reactions, yielding a bifunctional catalyst that surpasses the performance of noble metals such as Pt. We attribute the improved bifunctionality to strain-induced splitting of the eg orbitals, which can customize orbital asymmetry at the surface. Analogous to strain-induced shifts in the d-band center of noble metals relative to the Fermi level, such splitting can dramatically affect catalytic activity in this perovskite and other potentially more active oxides.

4.
Proc Natl Acad Sci U S A ; 109(1): 39-43, 2012 Jan 03.
Article in English | MEDLINE | ID: mdl-22171005

ABSTRACT

Photochemical radical initiation is a powerful tool for studying radical initiation and transport in biology. Ribonucleotide reductases (RNRs), which catalyze the conversion of nucleotides to deoxynucleotides in all organisms, are an exemplar of radical mediated transformations in biology. Class Ia RNRs are composed of two subunits: α2 and ß2. As a method to initiate radical formation photochemically within ß2, a single surface-exposed cysteine of the ß2 subunit of Escherichia coli Class Ia RNR has been labeled (98%) with a photooxidant ([Re ] = tricarbonyl(1,10-phenanthroline)(methylpyridyl)rhenium(I)). The labeling was achieved by incubation of S355C-ß2 with the 4-(bromomethyl)pyridyl derivative of [Re] to yield the labeled species, [Re]-S355C-ß2. Steady-state and time-resolved emission experiments reveal that the metal-to-ligand charge transfer (MLCT) excited-state (3)[Re ](∗) is not significantly perturbed after bioconjugation and is available as a phototrigger of tyrosine radical at position 356 in the ß2 subunit; transient absorption spectroscopy reveals that the radical lives for microseconds. The work described herein provides a platform for photochemical radical initiation and study of proton-coupled electron transfer (PCET) in the ß2 subunit of RNR, from which radical initiation and transport for this enzyme originates.


Subject(s)
Cysteine/metabolism , Escherichia coli/enzymology , Light , Phenanthrolines/metabolism , Ribonucleotide Reductases/metabolism , Staining and Labeling , Crystallography, X-Ray , Models, Molecular , Oxidants , Spectrophotometry, Ultraviolet
5.
J Phys Chem A ; 118(45): 10639-48, 2014 Nov 13.
Article in English | MEDLINE | ID: mdl-25187099

ABSTRACT

The synthesis, electrochemistry, and photophysical characterization of a 10,10-dimethylbiladiene tetrapyrrole bearing ancillary pentafluorophenyl groups at the 5- and 15-meso positions (DMBil1) is presented. This nonmacrocyclic tetrapyrrole platform is robust and can serve as an excellent ligand scaffold for Zn(2+) and Cu(2+) centers. X-ray diffraction studies conducted for DMBil1 along with the corresponding Zn[DMBil1] and Cu[DMBil1] complexes show that this ligand scaffold binds a single metal ion within the tetrapyrrole core. Additionally, electrochemical experiments revealed that all three of the aforementioned compounds display an interesting redox chemistry as the DMBil1 framework can be both oxidized and reduced by two electrons. Spectroscopic and photophysical experiments carried out for DMBil1, Zn[DMBil1], and Cu[DMBil1] provide a basic picture of the electronic properties of these platforms. All three biladiene derivatives strongly absorb light in the visible region and are weakly emissive. The ability of these compounds to sensitize the formation of (1)O2 at wavelengths longer than 500 nm was probed. Both the free base and Zn(2+) 10,10-dimethylbiladiene architectures show modest efficiencies for (1)O2 sensitization. The combination of structural, electrochemical, and photophysical data detailed herein provides a basis for the design of additional biladiene constructs for the activation of O2 and other small molecules.


Subject(s)
Copper/chemistry , Oxygen/chemistry , Tetrapyrroles/chemistry , Zinc/chemistry , Cations, Divalent/chemistry , Electrons , Light , Oxidation-Reduction , Photochemical Processes , Spectrum Analysis , X-Ray Diffraction
6.
Catal Today ; 225: 149-157, 2014 Apr 15.
Article in English | MEDLINE | ID: mdl-25395735

ABSTRACT

The reduction of carbon dioxide to chemical fuels such as carbon monoxide is an important challenge in the field of renewable energy conversion. Given the thermodynamic stability of carbon dioxide, it is difficult to efficiently activate this substrate in a selective fashion and the development of new electrocatalysts for CO2 reduction is of prime importance. To this end, we have prepared and studied a new fac-ReI(CO)3 complex supported by a bipyridine ligand containing ancillary BODIPY moieties ([Re(BB2)(CO)3Cl]). Voltammetry experiments revealed that this system displays a rich redox chemistry under N2, as [Re(BB2)(CO)3Cl] can be reduced by up to four electrons at modest potentials. These redox events have been characterized as the ReI/0 couple, and three ligand based reductions - two of which are localized on the BODIPY units. The ability of the BB2 ligand to serve as a non-innocent redox reservoir is manifest in an enhanced electrocatalysis with CO2 as compared to an unsubstituted Re-bipyridine complex lacking BODIPY units ([Re(bpy)(CO)3Cl]). The second order rate constant for reduction of CO2 by [Re(BB2)(CO)3Cl] was measured to be k = 3400 M-1s-1 at an applied potential of -2.0 V versus SCE, which is roughly three times greater than the corresponding unsubstituted Re-bipyridine homologue. Photophysical and photochemical studies were also carried out to determine if [Re(BB2)(CO)3Cl] was a competent platform for CO2 reduction using visible light. These experiments showed that this complex supports unusual excited state dynamics that precludes efficient CO2 reduction and are distinct from those that are typically observed for fac-ReI(CO)3 complexes.

7.
J Am Chem Soc ; 135(17): 6601-7, 2013 May 01.
Article in English | MEDLINE | ID: mdl-23594346

ABSTRACT

A homologous set of 5,5-dimethylphlorin macrocycles in which the identity of one aryl ring is systematically varied has been prepared. These derivatives contain ancillary pentafluorophenyl (3H(Phl(F))), mesityl (3H(Phl(Mes))), 2,6-bismethoxyphenyl (3H(Phl(OMe))), 4-nitrophenyl (3H(Phl(NO2))), or 4-tert-butylcarboxyphenyl (3H(Phl(CO2tBu))) groups at the 15-meso-position. These porphyrinoids were prepared in good yields (35-50%) and display unusual multielectron redox and photochemical properties. Each phlorin can be oxidized up to three times at modest potentials and can be reduced twice. The electron-donating and electron-releasing properties of the ancillary aryl substituent attenuate the potentials of these redox events; phlorins containing electron-donating aryl groups are easier to oxidize and harder to reduce, while the opposite trend is observed for phlorins containing electron-withdrawing functionalities. Phlorin substitution also has a pronounced effect on the observed photophysics, as introduction of electron-releasing aryl groups on the periphery of the macrocycle is manifest in larger emission quantum yields and longer fluorescence lifetimes. Each phlorin displays an intriguing supramolecular chemistry and can bind 2 equiv of fluoride. This binding is allosteric in nature, and the strength of halide binding correlates with the ability of the phlorin to stabilize the buildup of charge. Moreover, fluoride binding to generate complexes of the form 3H(Phl(R))·2F(-) modulates the redox potentials of the parent phlorin. As such, titration of phlorin with a source of fluoride represents a facile method to tune the ability of this class of porphyrinoid to absorb light and engage in redox chemistry.


Subject(s)
Acids, Heterocyclic/chemistry , Fluorides/chemistry , Acids, Heterocyclic/chemical synthesis , Acylation , Electrochemistry , Indicators and Reagents , Kinetics , Light , Oxidation-Reduction , Photochemistry , Spectrophotometry, Ultraviolet , Thermodynamics
8.
Inorg Chem ; 52(16): 9254-65, 2013 Aug 19.
Article in English | MEDLINE | ID: mdl-23909761

ABSTRACT

The photophysical properties of bis(phosphine) Pt(II) complexes constructed from 2,6-bis(pyrid-3-ylethynyl) aniline and 2,6-bis(pyrid-4-ylethynyl) aniline vary significantly, even though the complexes differ only in the position of the coordinating nitrogen. By capping the ligands with an aryl bis(phosphine) Pt(II) metal acceptor, the photophysical properties of the two isomeric systems were directly compared, revealing that the low-energy absorption and emission bands of the two systems were separated by 30 nm (1804 cm(-1)) and 39 nm (1692 cm(-1)), respectively. From the analysis of time-dependent density functional (TD-DFT) calculations and excited-state lifetime measurements, it was determined that the nature of the Pt-N bond in the HOMO and the sums of the radiative (k(rad)) and nonradiative (k(nr)) rate constants were significantly different in the two systems. As the dominant nonradiative decay pathway in aniline systems is relaxation from the triplet state through intersystem crossing (ISC), the difference in k(nr) can be ascribed to changes in ISC between isomers of the bis(phosphine) Pt(II)-capped 2,6-bis(pyrid-3-ylethynyl) aniline system. It was also determined that the photophysical properties of these capped systems can be altered by functionalizing the aryl capping ligand on the bis(phosphine) Pt(II) metal center, which perturbs the molecular orbitals involved in the observed optical transitions. In addition, an isoelectronic bis(phosphine) Pd(II)-capped system was prepared for comparison with the bis(phosphine) Pt(II) suite of complexes. The Pd(II) system showed significant changes in its low-energy absorption band, but preserved the characteristic emissive properties of its Pt(II) analogue with an even higher quantum yield.


Subject(s)
Amines/chemistry , Organoplatinum Compounds/chemistry , Phosphines/chemistry , Models, Molecular , Molecular Structure , Organoplatinum Compounds/chemical synthesis , Photochemical Processes , Quantum Theory
9.
J Am Chem Soc ; 134(14): 6326-36, 2012 Apr 11.
Article in English | MEDLINE | ID: mdl-22394103

ABSTRACT

The mechanism of nucleation, steady-state growth, and repair is investigated for an oxygen evolving catalyst prepared by electrodeposition from Co(2+) solutions in weakly basic electrolytes (Co-OEC). Potential step chronoamperometry and atomic force microscopy reveal that nucleation of Co-OEC is progressive and reaches a saturation surface coverage of ca. 70% on highly oriented pyrolytic graphite substrates. Steady-state electrodeposition of Co-OEC exhibits a Tafel slope approximately equal to 2.3 × RT/F. The electrochemical rate law exhibits a first order dependence on Co(2+) and inverse orders on proton (third order) and proton acceptor, methylphosphonate (first order for 1.8 mM ≤ [MeP(i)] ≤ 18 mM and second order dependence for 32 mM ≤ [MeP(i)] ≤ 180 mM). These electrokinetic studies, combined with recent XAS studies of catalyst structure, suggest a mechanism for steady state growth at intermediate MeP(i) concentration (1.8-18 mM) involving a rapid solution equilibrium between aquo Co(II) and Co(III) hydroxo species accompanied with a rapid surface equilibrium involving electrolyte dissociation and deprotonation of surface bound water. These equilibria are followed by a chemical rate-limiting step for incorporation of Co(III) into the growing cobaltate clusters comprising Co-OEC. At higher concentrations of MeP(i) ([MeP(i)] ≥ 32 mM), MePO(3)(2-) equilibrium binding to Co(II) in solution is suggested by the kinetic data. Consistent with the disparate pH profiles for oxygen evolution electrocatalysis and catalyst formation, NMR-based quantification of catalyst dissolution as a function of pH demonstrates functional stability and repair at pH values >6 whereas catalyst corrosion prevails at lower pH values. These kinetic insights provide a basis for developing and operating functional water oxidation (photo)anodes under benign pH conditions.


Subject(s)
Chemistry/methods , Cobalt/chemistry , Oxygen/chemistry , Catalysis , Electrochemistry/methods , Electrodes , Hydrogen/chemistry , Hydrogen-Ion Concentration , Kinetics , Microscopy, Atomic Force/methods , Organophosphonates/chemistry , Time Factors , Water/chemistry
10.
Inorg Chem ; 51(9): 5152-63, 2012 May 07.
Article in English | MEDLINE | ID: mdl-22475040

ABSTRACT

The heterobimetallic complexes, PtRh(tfepma)(2)(CN(t)Bu)X(3) (X = Cl, Br), are assembled by the treatment of Pt(cod)X(2) (cod =1,5-cyclooctadiene) with {Rh(cod)X}(2), in the presence of tert-butylisonitrile (CN(t)Bu) and tfepma (tfepma = bis(trifluoroethoxyl)phosphinomethylamine). The neutral complexes contain Pt-Rh single bonds with metal-metal separations of 2.6360(3) and 2.6503(7) Å between the square planar Pt and octahedral Rh centers for the Cl and Br complexes, respectively. Oxidation of the XPt(I)Rh(II)X(2) cores with suitable halide sources (PhICl(2) or Br(2)) furnishes PtRh(tfepma)(2)(CN(t)Bu)X(5), which preserves a Pt-Rh bond. For the chloride system, the initial oxidation product orients the platinum-bound chlorides in a meridional geometry, which slowly transforms to a facial arrangement in pentane solution as verified by X-ray crystal analysis. Irradiation of the mer- or fac-Cl(3)Pt(III)Rh(II)Cl(2) isomers with visible light in the presence of olefin promotes the photoelimination of halogen and regeneration of the reduced ClPt(I)Rh(II)Cl(2) core. In addition to exhibiting photochemistry similar to that of the chloride system, the oxidized bromide cores undergo thermal reduction chemistry in the presence of olefin with zeroth-order olefin dependence. Owing to an extremely high photoreaction quantum yield for the fac-ClPt(I)Rh(II)Cl(2) isomer, details of the X(2) photoelimination have been captured by transient absorption spectroscopy. We now report the first direct observation of the photointermediate that precedes halogen reductive elimination. The intermediate is generated promptly upon excitation (<8 ns), and halogen is eliminated from it with a rate constant of 3.6 × 10(4) s(-1). As M-X photoactivation and elimination is the critical step in HX splitting, these results establish a new guidepost for the design of HX splitting cycles for solar energy storage.


Subject(s)
Hydrogen/chemistry , Organometallic Compounds/chemistry , Photochemical Processes , Platinum/chemistry , Rhodium/chemistry , Organometallic Compounds/chemical synthesis , Oxidation-Reduction , Quantum Theory
11.
J Am Chem Soc ; 133(14): 5174-7, 2011 Apr 13.
Article in English | MEDLINE | ID: mdl-21413703

ABSTRACT

The oxidation of water to molecular oxygen is a kinetically demanding reaction that requires efficient coupling of proton and electron transfer. The key proton-coupled electron transfer (PCET) event in water oxidation mediated by a cobalt-phosphate-based heterogeneous catalyst is the one-electron, one-proton conversion of Co(III)-OH to Co(IV)-O. We now isolate the kinetics of this PCET step in a molecular Co(4)O(4) cubane model compound. Detailed electrochemical, stopped-flow, and NMR studies of the Co(III)-OH to Co(IV)-O reaction reveal distinct mechanisms for the unidirectional PCET self-exchange reaction and the corresponding bidirectional PCET. A stepwise mechanism, with rate-limiting electron transfer is observed for the bidirectional PCET at an electrode surface and in solution, whereas a concerted proton-electron transfer displaying a moderate KIE (4.3 ± 0.2), is observed for the unidirectional self-exchange reaction.


Subject(s)
Cobalt/chemistry , Models, Chemical , Oxygen/chemistry , Catalysis , Electrochemistry , Electron Transport , Oxidation-Reduction
12.
Inorg Chem ; 50(23): 12099-107, 2011 Dec 05.
Article in English | MEDLINE | ID: mdl-22050331

ABSTRACT

We previously showed that [Rh(2)(O(2)CCH(3))(2)(CH(3)CN)(6)](2+) binds to dsDNA only upon irradiation with visible light and that photolysis results in a 34-fold enhancement of its cytotoxicity toward Hs-27 human skin fibroblasts, making it potentially useful for photodynamic therapy (PDT). With the goal of gaining further insight on the photoinduced binding of DNA to the complex, we investigated by NMR spectroscopy the mechanism by which 2,2'-bipyridine (bpy), a model for biologically relevant bidentate nitrogen donor ligands, binds to [Rh(2)(O(2)CCH(3))(2)(CH(3)CN)(6)](2+) upon irradiation in D(2)O. The photochemical results are compared to the reactivity in the dark in D(2)O and CD(3)CN. The photolysis of [Rh(2)(O(2)CCH(3))(2)(CH(3)CN)(6)](2+) with equimolar bpy solutions in D(2)O with visible light affords [Rh(2)(O(2)CCH(3))(2)(eq/eq-bpy)(CH(3)CN)(2)(D(2)O(ax))(2)](2+) (eq/eq) with the reaction reaching completion in ~8 h. Only vestiges of eq/eq are observed at the same time in the dark, however, and the reaction is ~20 times slower. Conversely, the dark reaction of [Rh(2)(O(2)CCH(3))(2)(CH(3)CN)(6)](2+) with an equimolar amount of bpy in CD(3)CN affords [Rh(2)(O(2)CCH(3))(2)(η(1)-bpy(ax))(CH(3)CN)(5)](2+) (η(1)-bpy(ax)), which remains present even after 5 days of reaction. The photolysis results in D(2)O are consistent with the exchange of one equiv CH(3)CNeq for solvent, and the resulting species quickly reacting with bpy to generate eq/eq; the initial eq ligand dissociation is assisted by absorption of a photon, thus greatly enhancing the reaction rate. The photolytic reaction of [Rh(2)(O(2)CCH(3))(2)(CH(3)CN)(6)](2+):bpy in a 1:2 ratio in D(2)O affords the eq/eq and (eq/eq)(2) adducts. The observed differences in the reactivity in D(2)O vs CD(3)CN are explained by the relative ease of substitution of eq D(2)O vs CD(3)CN by the incoming bpy molecule. These results clearly highlight the importance of dissociation of an eq CH(3)CN molecule from the dirhodium core to attain high reactivity and underscore the importance of light for the reactivity of these compounds, which is essential for PDT agents.


Subject(s)
Chelating Agents/chemistry , DNA/chemistry , Organometallic Compounds/chemistry , Photolysis , Rhodium/chemistry , 2,2'-Dipyridyl/chemistry , Darkness , Ligands , Photochemotherapy
13.
Inorg Chem ; 49(6): 3035-43, 2010 Mar 15.
Article in English | MEDLINE | ID: mdl-20166685

ABSTRACT

Halogen oxidation of [Ir(I)Au(I)(dcpm)(2)(CO)X](PF(6)) (dcpm = bis(dicyclohexylphosphino)methane, X = Cl, Br) and [Ir(I)Au(I)(dppm)(2)(CN(t)Bu)(2)](PF(6))(2) (dppm = bis(diphenylphosphino)methane) furnishes the heretofore unknown class of d(7)-d(9) compounds comprising an Ir(II)Au(II) heterobimetallic core. A direct metal-metal bond is evident from a 0.2 A contraction in the intermetallic distance, as determined by X-ray crystallography. The photophysical consequence of iridium-gold bond formation, as elucidated by experimental and computational investigations, is an electronic structure dominated by a sigma --> sigma* transition that possesses significant ligand-to-metal charge transfer (LMCT) character. Accordingly, these compounds are non-emissive but photoreactive. Excitation of Ir(II)Au(II) complexes in the presence of a halogen trap prompts a net photoreductive elimination of halogen and the production of the two-electron reduced Ir(I)Au(I) species with about 10% quantum efficiency. The Ir(II)Au(II) complexes add to a growing library of d(7)-d(9) heterobimetallic species from which halogen elimination may be driven by a photon.


Subject(s)
Gold/chemistry , Halogens/chemistry , Iridium/chemistry , Crystallography, X-Ray , Models, Molecular , Photochemistry , Spectrum Analysis/methods
14.
Biochemistry ; 48(25): 5832-8, 2009 Jun 30.
Article in English | MEDLINE | ID: mdl-19402704

ABSTRACT

Photochemical ribonucleotide reductases (photoRNRs) have been developed to study the proton-coupled electron transfer (PCET) mechanism of radical transport in Escherichia coli class I ribonucleotide reductase (RNR). The transport of the effective radical occurs along several conserved aromatic residues across two subunits: beta2((*)Y122 --> W48 --> Y356) --> alpha2(Y731 --> Y730 --> C439). The current model for RNR activity suggests that radical transport is strongly controlled by conformational gating. The C-terminal tail peptide (Y-betaC19) of beta2 is the binding determinant of beta2 to alpha2 and contains the redox active Y356 residue. A photoRNR has been generated synthetically by appending a Re(bpy)(CO)(3)CN ([Re]) photo-oxidant next to Y356 of the 20-mer peptide. Emission from the [Re] center dramatically increases upon peptide binding, serving as a probe for conformational dynamics and the protonation state of Y356. The diffusion coefficient of [Re]-Y-betaC19 has been measured (k(d1) = 6.1 x 10(-7) cm(-1) s(-1)), along with the dissociation rate constant for the [Re]-Y-betaC19-alpha2 complex (7000 s(-1) > k(off) > 400 s(-1)). Results from detailed time-resolved emission and absorption spectroscopy reveal biexponential kinetics, suggesting a large degree of conformational flexibility in the [Re]-Y-betaC19-alpha2 complex that engenders partitioning of the N-terminus of the peptide into both bound and solvent-exposed fractions.


Subject(s)
2,2'-Dipyridyl/analogs & derivatives , 2,2'-Dipyridyl/chemistry , Carbon Monoxide/chemistry , Cyanides/chemistry , Molecular Probes/chemistry , Rhenium/chemistry , Ribonucleotide Reductases/chemistry , 2,2'-Dipyridyl/metabolism , Carbon Monoxide/metabolism , Cyanides/metabolism , Electron Transport , Escherichia coli Proteins/chemistry , Escherichia coli Proteins/metabolism , Fluorescent Dyes/metabolism , Free Radicals/metabolism , Hydrogen-Ion Concentration , Ligands , Molecular Probes/metabolism , Oxidation-Reduction , Photochemistry , Protein Conformation , Protein Stability , Protein Structure, Tertiary , Rhenium/metabolism , Ribonucleotide Reductases/metabolism , Static Electricity
15.
J Am Chem Soc ; 131(11): 3838-9, 2009 Mar 25.
Article in English | MEDLINE | ID: mdl-19249834

ABSTRACT

A cobalt-phosphate water-oxidizing catalyst forms from the oxidation of Co(2+) to Co(3+) in the presence of phosphate. We have employed radioactive (57)Co and (32)P isotopes to probe the dynamics of this catalyst during water-oxidation catalysis. We show that the catalyst is self-healing and that phosphate is the crucial factor responsible for repair.

16.
Inorg Chem ; 48(1): 375-85, 2009 Jan 05.
Article in English | MEDLINE | ID: mdl-19035764

ABSTRACT

Ru(II) complexes possessing new tridentate ligands with extended pi systems, pydppx (3-(pyrid-2'-yl)-11,12-dimethyl-dipyrido[3,2-a:2',3'-c]phenazine) and pydppn (3-(pyrid-2'-yl)-4,5,9,16-tetraaza-dibenzo[a,c]naphthacene), were synthesized and characterized. The investigation of the photophysical properties of the series [Ru(tpy)(n)(L)(2-n)](2+) (L = pydppx, pydppn, n = 0-2) reveals markedly different excited state behavior among the complexes. The Ru(II) complexes possessing the pydppx ligand are similar to the pydppz (3-(pyrid-2'-yl)dipyrido[3,2-a:2',3'-c]phenazine) systems, with a lowest energy metal-to-ligand charge transfer excited state with lifetimes of 1-4 ns. In contrast, the lowest energy excited state in the [Ru(tpy)(n)(pydppn)(2-n)](2+) (n = 0, 1) complexes is a ligand-centered (3)pipi* localized on the pydppn ligand with lifetimes of approximately 20 mus. The [Ru(tpy)(n)(pydppn)(2-n)](2+) (n = 0, 1) complexes are able to generate (1)O(2) with approximately 100% efficiency. Both [Ru(tpy)(pydppn)](2+) and [Ru(pydppn)(2)](2+) bind to DNA, however, the former exhibits a approximately 10-fold greater DNA binding constant than the latter. Efficient DNA photocleavage is observed for [Ru(tpy)(pydppn)](2+), owing to its ability to photosensitize the production of (1)O(2), which can mediate the reactivity. Such high quantum yields of (1)O(2) photosensitization of transition metal complexes may be useful in the design of new systems with long-lived excited states for photodynamic therapy.


Subject(s)
Naphthacenes/chemistry , Organometallic Compounds/chemistry , Phenazines/chemistry , Photosensitizing Agents/chemistry , Ruthenium/chemistry , Singlet Oxygen/chemistry , Absorption , Animals , Cattle , DNA/chemistry , DNA Cleavage/drug effects , DNA Cleavage/radiation effects , Electrochemistry , Ligands , Organometallic Compounds/chemical synthesis , Organometallic Compounds/pharmacology , Photochemotherapy , Photolysis/drug effects , Photolysis/radiation effects , Photosensitizing Agents/chemical synthesis , Photosensitizing Agents/pharmacology , Time Factors
17.
Inorg Chem ; 48(17): 8084-91, 2009 Sep 07.
Article in English | MEDLINE | ID: mdl-19435341

ABSTRACT

The complexes [Ru(bpy)(2)(OS)](PF(6)) and [Ru(bpy)(2)(OSO)](PF(6)), where bpy is 2,2'-bipyridine, OS is 2-methylthiobenzoate, and OSO is 2-methylsulfinylbenzoate, have been studied. The electrochemical and photochemical reactivity of [Ru(bpy)(2)(OSO)](+) is consistent with an isomerization of the bound sulfoxide from S-bonded (S-) to O-bonded (O-) following irradiation or electrochemical oxidation. Charge transfer excitation of [Ru(bpy)(2)(OSO)](+) in MeOH results in the appearance of two new metal-to-ligand charge transfer (MLCT) maxima at 355 and 496 nm, while the peak at 396 nm diminishes in intensity. The isomerization is reversible at room temperature in alcohol or propylene carbonate solution. In the absence of light, solutions of O-[Ru(bpy)(2)(OSO)](+) revert to S-[Ru(bpy)(2)(OSO)](+). Kinetic analysis reveals a biexponential decay with rate constants of 5.66(3) x 10(-4) s(-1) and 3.1(1) x 10(-5) s(-1). Cyclic voltammograms of S-[Ru(bpy)(2)(OSO)](+) are consistent with electron-transfer-triggered isomerization of the sulfoxide. Analysis of these voltammograms reveal E(S)(o)' = 0.86 V and E(O)(o)' = 0.49 V versus Ag/Ag(+) for the S- and O-bonded Ru(3+/2+) couples, respectively, in propylene carbonate. We found k(S-->O) = 0.090(15) s(-1) in propylene carbonate and k(S-->O) = 0.11(3) s(-1) in acetonitrile on Ru(III), which is considerably slower than has been reported for other sulfoxide isomerizations on ruthenium polypyridyl complexes following oxidation. The photoisomerization quantum yield (Phi(S-->O) = 0.45, methanol) is quite large, indicating a rapid excited state isomerization rate constant. The kinetic trace at 500 nm is monoexponential with tau = 150 ps, which is assigned to the excited S-->O isomerization rate. There is no spectroscopic or kinetic evidence for an O-bonded (3)MLCT excited state in the spectral evolution of S-[Ru(bpy)(2)(OSO)](+) to O-[Ru(bpy)(2)(OSO)](+). Thus, isomerization occurs nonadiabatically from an S-bonded (or eta(2)-sulfoxide) (3)MLCT excited state to an O-bonded ground state. Density functional theory calculations support the assigned spectroscopy and provide insight into ruthenium ligand bonding.


Subject(s)
Organometallic Compounds/chemistry , Ruthenium/chemistry , Sulfoxides/chemistry , Computer Simulation , Electrochemistry , Isomerism , Models, Chemical , Models, Molecular , Photochemistry , Quantum Theory , Sulfhydryl Compounds/chemistry
18.
J Phys Chem A ; 113(41): 11002-6, 2009 Oct 15.
Article in English | MEDLINE | ID: mdl-19761198

ABSTRACT

Complexes of the type [Ru(tpy)(L)(dmso)](n+) (where tpy = 2,2':6',2''-terpyridine; L = 2,2'-bipyridine (bpy), n = 2; N,N,N',N'-tetramethylethylene diamine (tmen), n = 2; acetylacetonate (acac), n = 1; oxalate (ox), n = 0; malonate (mal), n = 0) were investigated by density functional theory (DFT). The results do not support a promoting role for the dsigma* ligand field (LF) states during excited state S --> O isomerization. Instead, the calculations show that the formation of a Ru(III) center is important in the isomerization, along with the identity of the ancillary bidentate ligand. The present work shows that the orbital contributions from the bidentate ligand to the HOMO, which is typically centered on the ruthenium, plays an important role in the photochemical and oxidative reactivity of the complexes.


Subject(s)
Computer Simulation , Dimethyl Sulfoxide/chemistry , Oxygen/chemistry , Quantum Theory , Ruthenium/chemistry , Sulfur/chemistry , Isomerism , Models, Molecular , Molecular Structure , Organometallic Compounds/chemistry , Photochemistry
19.
Rev Sci Instrum ; 90(3): 033106, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30927821

ABSTRACT

We have developed a multipurpose vibrational sum frequency generation (vSFG) spectrometer that is uniquely capable of probing a broad range of chemical species, each requiring different experimental conditions, without optical realignment. Here, we take advantage of arbitrary near infrared (NIR) waveform generation using a 4f-pulse shaper equipped with a 2D spatial light modulator (SLM) to tailor upconversion pulses to meet sample dependent experimental requirements. This report details the experimental layout, details of the SLM calibration and implementation, and the intrinsic benefits/limitations of this new approach to vSFG spectroscopy. We have demonstrated the competency of this spectrometer by achieving an ∼3-fold increase in spectral resolution compared to conventional spectrometers by probing the model dimethyl sulfoxide/air interface. We also show the ability to suppress nonresonant background contributions from electrode interfaces using time delayed asymmetric waveforms that are generated by the NIR pulse shaper. It is expected that this advancement in instrumentation will broaden the types of samples researchers can readily study using nonlinear surface specific spectroscopies.

20.
J Am Chem Soc ; 130(4): 1163-70, 2008 Jan 30.
Article in English | MEDLINE | ID: mdl-18179207

ABSTRACT

The DNA light-switch complex [Ru(bpy)2(tpphz)]2+ (1, bpy = 2,2'-bipyridine, tpphz = tetrapyrido[3,2-a:2',3'-c:3'',2''-h:2''',3'''-j]phenazine) is luminescent when bound to DNA and in organic solvents and weakly emissive in water. To date, light-switch behavior by transition metal complexes has generally been regarded as confirmation of DNA intercalation. In contrast, the present work demonstrates that the nonintercalating bimetallic complex [(bpy)2Ru(tpphz)Ru(bpy)2]4+ (2) behaves as a DNA light-switch. Weak emission from the 3MLCT excited state of 2 is observed in water with lambda(em) = 623 nm (phi(em) = 1.4 x 10(-4)), and a red shift (lambda(em) = 702 nm) and 40-fold increase in intensity are observed upon addition of 100 microM calf thymus DNA (ct-DNA). Addition of increasing concentrations of 2 to 1 mM herring sperm DNA does not result in an increase in the viscosity of the solution, indicating that the complex is not an intercalator. Additionally, experiments were conducted to ensure that the emission enhancement did not arise from threading intercalation of the complex. The in situ generation of 2 intercalated between the base pairs of ct-DNA in a threading fashion, however, exhibits emission maximum at 685 nm, which is blue-shifted from that of surface-bound 2. DFT calculations show low-lying orbitals in 2 that are expected to exhibit nonemissive character when contributing to the MLCT state, in accord with the lower emission intensity observed for 2 relative to that for 1. To our knowledge, the present work is the first example of a nonintercalating light-switch metal complex, thus showing that light-switch behavior cannot be used exclusively as confirmation of intercalation.


Subject(s)
DNA/chemistry , Intercalating Agents/pharmacology , Light , Animals , Cattle , Electrochemistry/methods , Fishes , Hydrogen-Ion Concentration , Ligands , Magnetic Resonance Spectroscopy , Male , Nucleic Acid Conformation , Spermatozoa/metabolism , Thymus Gland/metabolism , Zinc/chemistry
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