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1.
Photosynth Res ; 159(2-3): 97-114, 2024 Mar.
Article in English | MEDLINE | ID: mdl-37093504

ABSTRACT

Flavodiiron proteins Flv1/Flv3 accept electrons from photosystem (PS) I. In this work we investigated light adaptation mechanisms of Flv1-deficient mutant of Synechocystis PCC 6803, incapable to form the Flv1/Flv3 heterodimer. First seconds of dark-light transition were studied by parallel measurements of light-induced changes in chlorophyll fluorescence, P700 redox transformations, fluorescence emission at 77 K, and OCP-dependent fluorescence quenching. During the period of Calvin cycle activation upon dark-light transition, the linear electron transport (LET) in wild type is supported by the Flv1/Flv3 heterodimer, whereas in Δflv1 mutant activation of LET upon illumination is preceded by cyclic electron flow that maintains State 2. The State 2-State 1 transition and Orange Carotenoid Protein (OCP)-dependent non-photochemical quenching occur independently of each other, begin in about 10 s after the illumination of the cells and are accompanied by a short-term re-reduction of the PSI reaction center (P700+). ApcD is important for the State 2-State 1 transition in the Δflv1 mutant, but S-M rise in chlorophyll fluorescence was not completely inhibited in Δflv1/ΔapcD mutant. LET in Δflv1 mutant starts earlier than the S-M rise in chlorophyll fluorescence, and the oxidation of plastoquinol (PQH2) pool promotes the activation of PSII, transient re-reduction of P700+ and transition to State 1. An attempt to induce state transition in the wild type under high intensity light using methyl viologen, highly oxidizing P700 and PQH2, was unsuccessful, showing that oxidation of intersystem electron-transport carriers might be insufficient for the induction of State 2-State 1 transition in wild type of Synechocystis under high light.


Subject(s)
Synechocystis , Electron Transport , Synechocystis/metabolism , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Mutation , Oxidation-Reduction , Photosystem I Protein Complex/genetics , Photosystem I Protein Complex/metabolism , Carotenoids/metabolism , Chlorophyll/metabolism , Photosystem II Protein Complex/genetics , Photosystem II Protein Complex/metabolism
2.
Int J Mol Sci ; 25(5)2024 Feb 28.
Article in English | MEDLINE | ID: mdl-38474026

ABSTRACT

Photosynthetic organisms have established photoprotective mechanisms in order to dissipate excess light energy into heat, which is commonly known as non-photochemical quenching. Cyanobacteria utilize the orange carotenoid protein (OCP) as a high-light sensor and quencher to regulate the energy flow in the photosynthetic apparatus. Triggered by strong light, OCP undergoes conformational changes to form the active red state (OCPR). In many cyanobacteria, the back conversion of OCP to the dark-adapted state is assisted by the fluorescence recovery protein (FRP). However, the exact molecular events involving OCP and its interaction with FRP remain largely unraveled so far due to their metastability. Here, we use small-angle neutron scattering combined with size exclusion chromatography (SEC-SANS) to unravel the solution structures of FRP-OCP complexes using a compact mutant of OCP lacking the N-terminal extension (∆NTEOCPO) and wild-type FRP. The results are consistent with the simultaneous presence of stable 2:2 and 2:1 FRP-∆NTEOCPO complexes in solution, where the former complex type is observed for the first time. For both complex types, we provide ab initio low-resolution shape reconstructions and compare them to homology models based on available crystal structures. It is likely that both complexes represent intermediate states of the back conversion of OCP to its dark-adapted state in the presence of FRP, which are of transient nature in the photocycle of wild-type OCP. This study demonstrates the large potential of SEC-SANS in revealing the solution structures of protein complexes in polydisperse solutions that would otherwise be averaged, leading to unspecific results.


Subject(s)
Cyanobacteria , Synechocystis , Light , Bacterial Proteins/metabolism , Cyanobacteria/metabolism , Photosynthesis , Chromatography, Gel , Synechocystis/metabolism
3.
Biochem Biophys Res Commun ; 683: 149119, 2023 11 26.
Article in English | MEDLINE | ID: mdl-37862781

ABSTRACT

The Orange Carotenoid Protein (OCP) regulates cyanobacterial photosynthetic activity through photoactivation in intense light. A hydrogen bonding network involving the keto-carotenoid oxygen and Y201 and W288 residues prevents the spontaneous activation of dark-adapted OCP. To investigate the role of the hydrogen bonds in OCP photocycling, we introduced non-canonical amino acids near the keto-carotenoid, particularly iodine at the meta-position of Y201. This modification significantly increased the yield of red OCP photoproducts, albeit with a shorter lifetime. Changes in tryptophan fluorescence during photocycling influenced by the presence of iodine near W288 revealed interactions between Y201 and W288 in the absence of the carotenoid in the C-domain. We propose that upon the relaxation of red states, a ternary complex with the carotenoid is formed. Analysis of spectral signatures and interaction energies indicates that the specific iodo-tyrosine configuration enhances interactions between the carotenoid and W288.


Subject(s)
Iodine , Tryptophan , Amino Acids , Hydrogen Bonding , Bacterial Proteins/metabolism , Fluorescence , Light , Carotenoids/metabolism
4.
Photosynth Res ; 156(1): 3-17, 2023 Apr.
Article in English | MEDLINE | ID: mdl-36063303

ABSTRACT

Our analysis of the X-ray crystal structure of canthaxanthin (CAN) showed that its ketolated ß-ionone rings can adopt two energetically equal, but structurally distinct puckers. Quantum chemistry calculations revealed that the potential energy surface of the ß-ionone ring rotation over the plane of the conjugated π-system in carotenoids depends on the pucker state of the ß-ring. Considering different pucker states and ß-ionone ring rotation, we found six separate local minima on the potential energy surface defining the geometry of the keto-ß-ionone ring-two cis and one trans orientation for each of two pucker states. We observed a small difference in energy and no difference in relative orientation for the cis-minima, but a pronounced difference for the position of trans-minimum in alternative pucker configurations. An energetic advantage of ß-ionone ring rotation from a specific pucker type can reach up to 8 kJ/mol ([Formula: see text]). In addition, we performed the simulation of linear absorption of CAN in hexane and in a unit cell of the CAN crystal. The electronic energies of [Formula: see text] transition were estimated both for the CAN monomer and in the CAN crystal. The difference between them reached [Formula: see text], which roughly corresponds to the energy gap between A and B pucker states predicted by theoretical estimations. Finally, we have discussed the importance of such effects for biological systems whose local environment determines conformational mobility, and optical/functional characteristics of carotenoid.


Subject(s)
Carotenoids , Norisoprenoids , Carotenoids/chemistry , Norisoprenoids/chemistry , Molecular Conformation , Canthaxanthin
5.
Biochem Biophys Res Commun ; 607: 96-102, 2022 06 04.
Article in English | MEDLINE | ID: mdl-35367834

ABSTRACT

Orange Carotenoid Protein (OCP) is a water-soluble photoreceptor involved in photoprotection of cyanobacteria. The photoactive OCP contains a bound ketocarotenoid cofactor held in a protein matrix with a hydrogen bonding network. We have developed a system to replace essential residues of the photoactive OCP with non-canonical aromatic analogues that produce well-defined chemical or steric changes. Preliminary spectroscopic evaluation of the generated OCP variants demonstrates the potential of this "molecular surgery" to disentangle protein-chromophore interaction networks that are critical for photoreceptor function. In this way, the number and strength of key contacts with non-canonical amino acids could be controlled and manipulated. We have illustrated this principle here by replacing hydrogen bond donating residues with aromatic non-canonical amino acids that alter the state preference of OCP.


Subject(s)
Amino Acids, Aromatic , Cyanobacteria , Amino Acids/metabolism , Amino Acids, Aromatic/metabolism , Bacterial Proteins/metabolism , Carotenoids/metabolism , Cyanobacteria/metabolism
6.
Opt Lett ; 47(17): 4455-4458, 2022 Sep 01.
Article in English | MEDLINE | ID: mdl-36048677

ABSTRACT

Imaging of molecular-specific photophysical parameters such as fluorescence intensity, emission band shape, or fluorescence decay is widely used in biophysics. Here we propose a method for quantitative mapping of another molecular-specific parameter in living cells, two-photon absorption cross section, based on the fluorescence saturation effect. Using model dye solutions and cell culture, we show that the analysis of the fluorescence signal dependencies on the intensity of two-photon excitation within the range typical for routine two-photon microscopy experiments allows one to reconstruct two-photon absorption cross section maps across the sample. We believe that the absorption cross section contrast visualized by the proposed fluorescence saturation imaging microscopy could be a new tool for studying processes in living cells and tissues.


Subject(s)
Fluorescent Dyes , Photons , Fluorescent Dyes/pharmacology , Microscopy, Fluorescence/methods , Optical Imaging , Spectrometry, Fluorescence
7.
Int J Mol Sci ; 23(21)2022 Oct 26.
Article in English | MEDLINE | ID: mdl-36361706

ABSTRACT

The real-time monitoring of the intracellular pH in live cells with high precision represents an important methodological challenge. Although genetically encoded fluorescent indicators can be considered as a probe of choice for such measurements, they are hindered mostly by the inability to determine an absolute pH value and/or a narrow dynamic range of the signal, making them inefficient for recording the small pH changes that typically occur within cellular organelles. Here, we study the pH sensitivity of a green-fluorescence-protein (GFP)-based emitter (EGFP-Y145L/S205V) with the alkaline-shifted chromophore's pKa and demonstrate that, in the pH range of 7.5-9.0, its fluorescence lifetime changes by a factor of ~3.5 in a quasi-linear manner in mammalian cells. Considering the relatively strong lifetime response in a narrow pH range, we proposed the mitochondria, which are known to have a weakly alkaline milieu, as a target for live-cell pH measurements. Using fluorescence lifetime imaging microscopy (FLIM) to visualize the HEK293T cells expressing mitochondrially targeted EGFP-Y145L/S205V, we succeeded in determining the absolute pH value of the mitochondria and recorded the ETC-uncoupler-stimulated pH shift with a precision of 0.1 unit. We thus show that a single GFP with alkaline-shifted pKa can act as a high-precision indicator that can be used in a specific pH range.


Subject(s)
Coloring Agents , Fluorescent Dyes , Animals , Humans , Fluorescence , HEK293 Cells , Green Fluorescent Proteins/genetics , Microscopy, Fluorescence/methods , Hydrogen-Ion Concentration , Mammals
8.
Int J Mol Sci ; 23(24)2022 Dec 12.
Article in English | MEDLINE | ID: mdl-36555408

ABSTRACT

Red blood cell (RBC) aggregation and deformation are governed by the molecular processes occurring on the membrane. Since several social important diseases are accompanied by alterations in RBC aggregation and deformability, it is important to develop a diagnostic parameter of RBC membrane structural integrity and stability. In this work, we propose membrane microviscosity assessed by time-resolved fluorescence anisotropy of the lipophilic PKH26 fluorescent probe as a diagnostic parameter. We measured the fluorescence decay curves of the PKH26 probe in the RBC membrane to establish the optimal parameters of the developed fluorescence assay. We observed a complex biphasic profile of the fluorescence anisotropy decay characterized by two correlation times corresponding to the rotational diffusion of free PKH26, and membrane-bounded molecules of the probe. The developed assay allowed us to estimate membrane microviscosity ηm in the range of 100-500 cP depending on the temperature, which paves the way for assessing RBC membrane properties in clinical applications as predictors of blood microrheological abnormalities.


Subject(s)
Erythrocyte Membrane , Organic Chemicals , Viscosity , Fluorescence Polarization , Cell Membrane
9.
Small ; 17(45): e2102643, 2021 11.
Article in English | MEDLINE | ID: mdl-34605165

ABSTRACT

Development of CAR-T therapy led to immediate success in the treatment of B cell leukemia. Manufacturing of therapy-competent functional CAR-T cells needs robust protocols for ex vivo/in vitro expansion of modified T-cells. This step is challenging, especially if non-viral low-efficiency delivery protocols are used to generate CAR-T cells. Modern protocols for CAR-T cell expansion are imperfect since non-specific stimulation results in rapid outgrowth of CAR-negative T cells, and removal of feeder cells from mixed cultures necessitates additional purification steps. To develop a specific and improved protocol for CAR-T cell expansion, cell-derived membrane vesicles are taken advantage of, and the simple structural demands of the CAR-antigen interaction. This novel approach is to make antigenic microcytospheres from common cell lines stably expressing surface-bound CAR antigens, and then use them for stimulation and expansion of CAR-T cells. The data presented in this article clearly demonstrate that this protocol produced antigen-specific vesicles with the capacity to induce stronger stimulation, proliferation, and functional activity of CAR-T cells than is possible with existing protocols. It is predicted that this new methodology will significantly advance the ability to obtain improved populations of functional CAR-T cells for therapy.


Subject(s)
Immunotherapy, Adoptive , T-Lymphocytes , Cell Line, Tumor
10.
Photochem Photobiol Sci ; 20(6): 791-803, 2021 Jun.
Article in English | MEDLINE | ID: mdl-34085171

ABSTRACT

mKate red-to-green photoconversion is a non-canonical type of phototransformation in fluorescent proteins, with a poorly understood mechanism. We have hypothesized that the daughter mKate2 protein may also be photoconvertible, and that this phenomenon would be connected with mKate(2) chromophore photoreduction. Indeed, upon the intense irradiation of the protein sample supplemented by sodium dithionite, the accumulation of green as well as blue spectral forms is enhanced. The reaction was shown to be reversible upon the reductant's removal. However, an analysis of the fluorescence microscopy data, absorption spectra, kinetics and time-resolved fluorescence spectroscopy revealed that the short-wavelength spectral forms of mKate(2) exist before photoactivation, that their fractions increase light-independently after dithionite addition, and that the conversion is facilitated by the photobleaching of the red chromophore form.


Subject(s)
Luminescent Proteins/chemistry , Microscopy, Fluorescence , Oxidation-Reduction , Photobleaching , Red Fluorescent Protein
11.
Photochem Photobiol Sci ; 19(6): 763-775, 2020 Jun.
Article in English | MEDLINE | ID: mdl-33856677

ABSTRACT

Cyanobacteria utilize an elegant photoprotection mechanism mediated by the photoactive Orange Carotenoid Protein (OCP), which upon binding dissipates excess energy from light-harvesting complexes, phycobilisomes. The OCP activity is efficiently regulated by its partner, the Fluorescence Recovery Protein (FRP). FRP accelerates OCP conversion to the resting state, thus counteracting the OCP-mediated photoprotection. Behind the deceptive simplicity of such regulation is hidden a multistep process involving dramatic conformational rearrangements in OCP and FRP, the details of which became clearer only a decade after the FRP discovery. Yet many questions regarding the functioning of FRP have remained controversial. In this review, we summarize the current knowledge and understanding of the FRP role in cyanobacterial photoprotection as well as its evolutionary history that presumably lies far beyond cyanobacteria.


Subject(s)
Bacterial Proteins/chemistry , Cyanobacteria/chemistry , Fluorescence , Carotenoids/chemistry , Photochemical Processes
12.
Biochem Biophys Res Commun ; 516(3): 699-704, 2019 08 27.
Article in English | MEDLINE | ID: mdl-31253393

ABSTRACT

To regulate the effectiveness of photosynthesis and photoprotection cyanobacteria utilize a system consisting of only few components. Photoactivation of the orange carotenoid protein (OCP) enables its interaction with a specific, yet controversial site in the core of the light-harvesting antenna, the phycobilisome (PBS). The resulting delivery of a quenching carotenoid molecule to the antenna pigments leads to thermal dissipation of the excitation energy absorbed by the latter, and, consequently, to depression of the photosynthetic activity. The nature of the OCP-induced PBS fluorescence quenching mechanism remains debatable, however, specific protein-protein interactions between PBS and photoactivated OCP should provide a unique environment for interactions between the excitation energy donor and acceptor. Here we questioned whether the Förster theory of resonance energy transfer can explain PBS quenching by OCP even at their very small spectral overlap and whether in model systems, the absence of specific protein-protein interactions of OCP with a donor of energy can be compensated by a better spectral overlap. Hybridization of algal R-phycoerythrin with cyanobacterial OCP by chemical crosslinking results in a significant decrease of R-phycoerythrin fluorescence lifetime, irrespective of the OCP photoactivation status. Supported by structural considerations, this indicates that FRET may be the essence of cyanobacterial photoprotection mechanism.


Subject(s)
Algal Proteins/metabolism , Bacterial Proteins/metabolism , Fluorescence Resonance Energy Transfer/methods , Phycoerythrin/metabolism , Algal Proteins/chemistry , Bacterial Proteins/chemistry , Carotenoids/chemistry , Carotenoids/metabolism , Light , Photosynthesis/radiation effects , Phycobilisomes/chemistry , Phycobilisomes/metabolism , Phycoerythrin/chemistry , Porphyra/chemistry , Spectrometry, Fluorescence/methods
13.
Photosynth Res ; 139(1-3): 185-201, 2019 Mar.
Article in English | MEDLINE | ID: mdl-30039357

ABSTRACT

The phototrophic cyanobacterium Halomicronema hongdechloris shows far-red light-induced accumulation of chlorophyll (Chl) f, but the involvement of the pigment in photosynthetic energy harvesting by photosystem (PS) II is controversially discussed. While H. hongdechloris contains negligible amounts of Chl f in white-light culture conditions, the ratio of Chl f to Chl a is reversibly changed up to 1:8 under illumination with far-red light (720-730 nm). We performed UV-Vis absorption spectroscopy, time-integrated and time-resolved fluorescence spectroscopy for the calculation of decay-associated spectra (DAS) to determine excitation energy transfer (EET) processes between photosynthetic pigments in intact H. hongdechloris filaments. In cells grown under white light, highly efficient EET occurs from phycobilisomes (PBSs) to Chl a with an apparent time constant of about 100 ps. Charge separation occurs with a typical apparent time constant of 200-300 ps from Chl a. After 3-4 days of growth under far-red light, robust Chl f content was observed in H. hongdechloris and EET from PBSs reached Chl f efficiently within 200 ps. It is proposed based on mathematical modeling by rate equation systems for EET between the PBSs and PSII and subsequent electron transfer (ET) that charge separation occurs from Chl a and excitation energy is funneled from Chl f to Chl a via an energetically uphill EET driven by entropy, which is effective because the number of Chl a molecules coupled to Chl f is at least eight- to tenfold larger than the corresponding number of Chl f molecules. The long lifetime of Chl f molecules in contact to a tenfold larger pool of Chl a molecules allows Chl f to act as an intermediate energy storage level, from which the Gibbs free energy difference between Chl f and Chl a can be overcome by taking advantage from the favorable ratio of degeneracy coefficients, which formally represents a significant entropy gain in the Eyring formulation of the Arrhenius law. Direct evidence for energetically uphill EET and charge separation in PSII upon excitation of Chl f via anti-Stokes fluorescence in far-red light-adapted H. hongdechloris cells was obtained: Excitation by 720 nm laser light resulted in robust Chl a fluorescence at 680 nm that was distinctly temperature-dependent and, notably, increased upon DCMU (3-(3,4-dichlorophenyl)-1,1-dimethylurea) treatment in far-red light-adapted cells. Thus, rather than serving as an excitation energy trap, Chl f in far-red light-adapted H. hongdechloris cells is directly contributing to oxygenic photosynthesis at PSII.


Subject(s)
Chlorophyll/analogs & derivatives , Light , Photosynthesis/physiology , Chlorophyll/metabolism , Entropy , Photosynthesis/genetics , Photosystem II Protein Complex/metabolism
14.
Phys Chem Chem Phys ; 21(46): 25707-25719, 2019 Nov 27.
Article in English | MEDLINE | ID: mdl-31720635

ABSTRACT

To prevent irreversible damage caused by an excess of incident light, the photosynthetic machinery of many cyanobacteria uniquely utilizes the water-soluble orange carotenoid protein (OCP) containing a single keto-carotenoid molecule. This molecule is non-covalently embedded into the two OCP domains which are interconnected by a flexible linker. The phenomenon of OCP photoactivation, causing significant changes in carotenoid absorption in the orange and red form of OCP, is currently being thoroughly studied. Numerous additional spectral forms of natural and synthetic OCP-like proteins have been unearthed. The optical properties of carotenoids are strongly determined by the interaction of their electronic states with vibrational modes, the surrounding protein matrix, and the solvent. In this work, the effects of the pigment-protein interaction and vibrational relaxation in OCP were studied by computational simulation of linear absorption. Taking into account Raman spectroscopy data and applying the multimode Brownian oscillator model as well as the cumulant expansion technique, we have calculated a set of characteristic microparameters sufficient to demarcate different carotenoid states in OCP forms, using the model carotenoids spheroidene and spheroidenone in methanol/acetone solution as benchmarks. The most crucial microparameters, which determine the effect of solvent and protein environment, are the Huang-Rhys factors and the frequencies of C[double bond, length as m-dash]C and C-C stretching modes, the low-frequency mode and the FWHM due to inhomogeneous line broadening. Considering the difference of linear absorption between spheroidene and spheroidenone, which remarkably resembles the photoinduced changes of OCP absorption, and applying quantum chemical calculations, we discuss structural and functional determinants of carotenoid binding proteins.


Subject(s)
Bacterial Proteins/chemistry , Carotenoids/chemistry , Molecular Dynamics Simulation , Quantum Theory , Water/chemistry , Molecular Structure , Solubility
15.
Biochim Biophys Acta Bioenerg ; 1859(5): 382-393, 2018 May.
Article in English | MEDLINE | ID: mdl-29524381

ABSTRACT

Photosynthesis requires a balance between efficient light harvesting and protection against photodamage. The cyanobacterial photoprotection system uniquely relies on the functioning of the photoactive orange carotenoid protein (OCP) that under intense illumination provides fluorescence quenching of the light-harvesting antenna complexes, phycobilisomes. The recently identified fluorescence recovery protein (FRP) binds to the photoactivated OCP and accelerates its relaxation into the basal form, completing the regulatory circle. The molecular mechanism of FRP functioning is largely controversial. Moreover, since the available knowledge has mainly been gained from studying Synechocystis proteins, the cross-species conservation of the FRP mechanism remains unexplored. Besides phylogenetic analysis, we performed a detailed structural-functional analysis of two selected low-homology FRPs by comparing them with Synechocystis FRP (SynFRP). While adopting similar dimeric conformations in solution and preserving binding preferences of SynFRP towards various OCP variants, the low-homology FRPs demonstrated distinct binding stoichiometries and differentially accentuated features of this functional interaction. By providing clues to understand the FRP mechanism universally, our results also establish foundations for upcoming structural investigations necessary to elucidate the FRP-dependent regulatory mechanism.


Subject(s)
Bacterial Proteins/chemistry , Bacterial Proteins/metabolism , Phylogeny , Synechocystis/chemistry , Synechocystis/metabolism , Bacterial Proteins/genetics , Structural Homology, Protein , Structure-Activity Relationship , Synechocystis/genetics
16.
Biochem Biophys Res Commun ; 497(1): 58-64, 2018 02 26.
Article in English | MEDLINE | ID: mdl-29408456

ABSTRACT

Steroidogenic acute regulatory protein (StAR, STARD1) is a key factor of intracellular cholesterol transfer to mitochondria, necessary for adrenal and gonadal steroidogenesis, and is an archetypal member of the START protein family. Despite the common overall structural fold, START members differ in their binding selectivity toward various lipid ligands, but the lack of direct structural information hinders complete understanding of the binding process and cholesterol orientation in the STARD1 complex in particular. Cholesterol binding has been widely studied by commercially available fluorescent steroids, but the effect of the fluorescent group position on binding remained underexplored. Here, we dissect STARD1 interaction with cholesterol-like steroids bearing 7-nitrobenz-2-oxa-1,3-diazol-4-yl (NBD) group in different positions, namely, with 22-NBD-cholesterol (22NC), 25-NBD-cholesterol (25NC), 20-((NBDamino)-pregn-5-en-3-ol (20NP) and 3-(NBDamino)-cholestane (3NC). While being able to stoichiometrically bind 22NC and 20NP with high fluorescence yield and quantitative exhaustion of fluorescence of some protein tryptophans, STARD1 binds 25NC and 3NC with much lower affinity and poor fluorescence response. In contrast to 3NC, binding of 20NP leads to STARD1 stabilization and substantially increases the NBD fluorescence lifetime. Remarkably, in terms of fluorescence response, 20NP slightly outperforms commonly used 22NC and can thus be used for screening of various potential ligands by a competition mechanism in the future.


Subject(s)
Azoles/chemistry , Cholesterol/analogs & derivatives , Cholesterol/chemistry , Molecular Probe Techniques , Nitrobenzenes/chemistry , Phosphoproteins/chemistry , Protein Interaction Mapping/methods , Binding Sites , Humans , Kinetics , Molecular Probes/chemistry , Protein Binding , Spectrometry, Fluorescence/methods , Staining and Labeling , Structure-Activity Relationship
17.
Photosynth Res ; 135(1-3): 125-139, 2018 Mar.
Article in English | MEDLINE | ID: mdl-28236074

ABSTRACT

Photoprotection in cyanobacteria relies on the interplay between the orange carotenoid protein (OCP) and the fluorescence recovery protein (FRP) in a process termed non-photochemical quenching, NPQ. Illumination with blue-green light converts OCP from the basic orange state (OCPO) into the red-shifted, active state (OCPR) that quenches phycobilisome (PBs) fluorescence to avoid excessive energy flow to the photosynthetic reaction centers. Upon binding of FRP, OCPR is converted to OCPO and dissociates from PBs; however, the mode and site of OCPR/FRP interactions remain elusive. Recently, we have introduced the purple OCPW288A mutant as a competent model for the signaling state OCPR (Sluchanko et al., Biochim Biophys Acta 1858:1-11, 2017). Here, we have utilized fluorescence labeling of OCP at its native cysteine residues to generate fluorescent OCP proteins for fluorescence correlation spectroscopy (FCS). Our results show that OCPW288A has a 1.6(±0.4)-fold larger hydrodynamic radius than OCPO, supporting the hypothesis of domain separation upon OCP photoactivation. Whereas the addition of FRP did not change the diffusion behavior of OCPO, a substantial compaction of the OCPW288A mutant and of the OCP apoprotein was observed. These results show that sufficiently stable complexes between FRP and OCPW288A or the OCP apoprotein are formed to be detected by FCS. 1:1 complex formation with a micromolar apparent dissociation constant between OCP apoprotein and FRP was confirmed by size-exclusion chromatography. Beyond the established OCP/FRP interaction underlying NPQ cessation, the OCP apoprotein/FRP interaction suggests a more general role of FRP as a scaffold protein for OCP maturation.


Subject(s)
Apoproteins/metabolism , Bacterial Proteins/metabolism , Signal Transduction , Amino Acid Sequence , Apoproteins/chemistry , Bacterial Proteins/chemistry , Calorimetry, Differential Scanning , Chromatography, Gel , Cysteine/metabolism , Diffusion , Hydrodynamics , Mass Spectrometry , Reproducibility of Results , Spectrometry, Fluorescence , Staining and Labeling , Sulfhydryl Compounds/metabolism
18.
Photosynth Res ; 135(1-3): 141-142, 2018 03.
Article in English | MEDLINE | ID: mdl-28929465

ABSTRACT

In Fig. 1a in the original article, the amino acid side chains were incorrectly labeled in the structure representation of the orange carotenoid protein (OCP). The corrected figure is printed in this erratum.

19.
Biophys J ; 113(10): 2249-2260, 2017 Nov 21.
Article in English | MEDLINE | ID: mdl-28988699

ABSTRACT

The Na+,K+-ATPase is a plasma membrane ion transporter of high physiological importance for ion homeostasis and cellular excitability in electrically active tissues. Mutations in the genes coding for Na+,K+-ATPase α-subunit isoforms lead to severe human pathologies including Familial Hemiplegic Migraine type 2, Alternating Hemiplegia of Childhood, Rapid-onset Dystonia Parkinsonism, or epilepsy. Many of the reported mutations lead to change- or loss-of-function effects, whereas others do not alter the functional properties, but lead to, e.g., reduced protein stability, reduced protein expression, or defective plasma membrane targeting. Na+,K+-ATPase frequently assembles with other membrane transporters or cellular matrix proteins in specialized plasma membrane microdomains, but the effects of these interactions on targeting or protein mobility are elusive so far. Mutation of established interaction motifs of the Na+,K+-ATPase with ankyrin B and caveolin-1 are expected to result in changes in plasma membrane targeting, changes of the localization pattern, and of the diffusion behavior of the enzyme. We studied the consequences of mutations in these binding sites by monitoring diffusion of eGFP-labeled Na+,K+-ATPase constructs in the plasma membrane of HEK293T cells by fluorescence correlation spectroscopy as well as fluorescence recovery after photobleaching or photoswitching, and observed significant differences compared to the wild-type enzyme, with synergistic effects for combinations of interaction site mutations. These measurements expand the possibilities to study the consequences of Na+,K+-ATPase mutations and provide information about the interaction of Na+,K+-ATPase α-isoforms with cellular matrix proteins, the cytoskeleton, or other membrane protein complexes.


Subject(s)
Ankyrins/chemistry , Ankyrins/metabolism , Caveolin 1/chemistry , Caveolin 1/metabolism , Cell Membrane/metabolism , Mutation , Sodium-Potassium-Exchanging ATPase/metabolism , Amino Acid Sequence , Animals , Biological Transport/genetics , Diffusion , HEK293 Cells , Humans , Models, Molecular , Oocytes/metabolism , Protein Binding/genetics , Protein Domains , Rubidium/metabolism , Sodium-Potassium-Exchanging ATPase/chemistry , Sodium-Potassium-Exchanging ATPase/genetics , Xenopus laevis/metabolism
20.
Biophys J ; 113(2): 402-414, 2017 Jul 25.
Article in English | MEDLINE | ID: mdl-28746851

ABSTRACT

Orange Carotenoid Protein (OCP) is known as an effector and regulator of cyanobacterial photoprotection. This 35 kDa water-soluble protein provides specific environment for blue-green light absorbing keto-carotenoids, which excitation causes dramatic but fully reversible rearrangements of the OCP structure, including carotenoid translocation and separation of C- and N-terminal domains upon transition from the basic orange to photoactivated red OCP form. Although recent studies greatly improved our understanding of the OCP photocycle and interaction with phycobilisomes and the fluorescence recovery protein, the mechanism of OCP assembly remains unclear. Apparently, this process requires targeted delivery and incorporation of a highly hydrophobic carotenoid molecule into the water-soluble apoprotein of OCP. Recently, we introduced, to our knowledge, a novel carotenoid carrier protein, COCP, which consists of dimerized C-domain(s) of OCP and can combine with the isolated N-domain to form transient OCP-like species. Here, we demonstrate that in vitro COCP efficiently transfers otherwise tightly bound carotenoid to the full-length OCP apoprotein, resulting in formation of photoactive OCP from completely photoinactive species. We accurately analyze the peculiarities of this process that, to the best of our knowledge, appears unique, a previously uncharacterized protein-to-protein carotenoid transfer mechanism. We hypothesize that a similar OCP assembly can occur in vivo, substantiating specific roles of the COCP carotenoid carrier in cyanobacterial photoprotection.


Subject(s)
Apoproteins/metabolism , Bacterial Proteins/metabolism , Carotenoids/metabolism , Apoproteins/genetics , Bacterial Proteins/genetics , Escherichia coli/genetics , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Hydrodynamics , Hydrophobic and Hydrophilic Interactions , Kinetics , Models, Molecular , Photochemical Processes , Protein Multimerization , Protein Stability , Protein Structure, Quaternary , Scattering, Small Angle , Spectrometry, Fluorescence , Synechocystis , Thermodynamics , X-Ray Diffraction
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