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1.
Anal Chem ; 94(10): 4380-4389, 2022 03 15.
Article in English | MEDLINE | ID: mdl-35230823

ABSTRACT

A multi-component microarray, applying a novel analysis algorithm, was developed for quantitative evaluation of the SARS-CoV-2 vaccines' immunogenicity. The array enables simultaneous quantitation of IgG, IgM, and IgA, specific to the SARS-CoV-2 spike, receptor binding domain, and nucleocapsid proteins. The developed methodology is based on calculating an apparent immunoglobulin signal from the linear range of the fluorescent read-outs generated by scanning the microarray slides at different exposure times. A dedicated algorithm, employing a rigorous set of embedded conditions, then generates a normalized signal for each of the unique assays. Qualification of the multi-component array performance (evaluating linearity, extended dynamic-range, specificity, precision, and accuracy) was carried out with an in-house COVID-19, qRT-PCR positive serum, as well as pre-pandemic commercial negative sera. Results were compared to the WHO international standard for anti-SARS-CoV-2 immunoglobulins. Specific IgG, IgM, and IgA signals obtained by this array enabled successful discrimination between SARS-CoV-2 q-RT-PCR positive (seroconverted SARS-CoV-2 patients) and negative (naïve) samples. This array is currently used for evaluation of the humoral response to BriLife, the VSV-based Israeli vaccine during phase I/II clinical trials.


Subject(s)
COVID-19 Vaccines , COVID-19 , Antibodies, Viral , COVID-19/diagnosis , COVID-19/prevention & control , Humans , Immunoglobulin G , Immunoglobulin M , SARS-CoV-2/genetics , Sensitivity and Specificity
2.
J Occup Environ Hyg ; 18(2): 72-83, 2021 02.
Article in English | MEDLINE | ID: mdl-33315526

ABSTRACT

Simple plastic face shields have numerous practical advantages over regular surgical masks. In light of the spreading COVID-19 pandemic, the potential of face shields as a substitution for surgical masks was investigated. In order to determine the efficacy of the protective equipment we used a cough simulator. The protective equipment considered was placed on a manikin head that simulated human breathing. Concentration and size distribution of small particles that reached the manikin respiration pathways during the few tens of seconds following the cough event were monitored. Additionally, water sensitive papers were taped on the tested protective equipment and the manikin face. In the case of frontal exposure, for droplet diameter larger than 3 µm, the shield efficiency in blocking cough droplets was found to be comparable to that of regular surgical masks, with enhanced protection for portions of the face that the mask does not cover. Additionally, for finer particles, down to 0.3 µm diameter, a shield blocked about 10 times more fine particles than the surgical mask. When exposure from the side was considered, the performance of the shield was found to depend dramatically on its geometry. While a narrow shield allowed more droplets and aerosol to penetrate in comparison to a mask under the same configuration, a slightly wider shield significantly improved the performance. The source control potential of shields was also investigated. A shield, and alternatively, a surgical mask, were placed on the cough simulator, while the breathing simulator, situated 60 cm away in the jet direction, remained totally exposed. In both cases, no droplets or particles were found in the vicinity of the breathing simulator. Conducted experiments were limited to short time periods after expiratory events, and do not include longer time ranges associated with exposure to suspended aerosol. Thus, additional evidence regarding the risk posed by floating aerosol is needed to establish practical conclusions regarding actual transmittance reduction potential of face shields and surgical face masks.


Subject(s)
COVID-19/prevention & control , Inhalation Exposure/analysis , Masks/standards , Personal Protective Equipment/standards , SARS-CoV-2/isolation & purification , Aerosols/analysis , Air Microbiology , Cough/virology , Environmental Monitoring , Humans , Infectious Disease Transmission, Patient-to-Professional/prevention & control , Inhalation Exposure/prevention & control , Materials Testing , Occupational Exposure/analysis , Occupational Exposure/prevention & control
3.
J Theor Biol ; 253(4): 838-42, 2008 Aug 21.
Article in English | MEDLINE | ID: mdl-18550086

ABSTRACT

A new technique for the modeling of perennial vegetation patchiness in the arid/semiarid climatic zone is suggested. Incorporating the stochasticity that affects life history of seedlings and the deterministic dynamics of soil moisture and biomass, this model is flexible enough to yield qualitatively different forms of spatial organization. In the facilitation-dominated regime, scale free distribution of patch sizes is observed, in correspondence with recent field studies. In the competition controlled case, on the other hand, power-law statistics is valid up to a cutoff, and an intrinsic length scale appears.


Subject(s)
Desert Climate , Ecosystem , Plant Physiological Phenomena , Biomass , Models, Biological , Water
4.
Phys Rev Lett ; 103(3): 030601, 2009 Jul 17.
Article in English | MEDLINE | ID: mdl-19659259

ABSTRACT

The scale-free distribution of cluster sizes in continuous phase transitions is linked to the law of proportional effect. A numerical study of a two-dimensional Ising model suggests that a cluster size undergoes a multiplicative birth-death process. At the transition the ratio between birth and death rates approaches unity for large clusters, and the resulting steady state shows a power-law behavior. The percolation dynamic, on the other hand, yields a geometric phase transition without ergodicity breaking, where large-scale merging and splitting of clusters dominate the distribution. Instead of short-range birth-death jumps, the percolation transition is characterized by Lévi flights along the cluster-size axis.

5.
Phys Rev Lett ; 101(26): 268104, 2008 Dec 31.
Article in English | MEDLINE | ID: mdl-19437677

ABSTRACT

Recent studies of cluster distribution in various ecosystems revealed Pareto statistics for the size of spatial colonies. These results were supported by cellular automata simulations that yield robust criticality for endogenous pattern formation based on positive feedback. We show that this patch statistics is a manifestation of the law of proportionate effect. Mapping the stochastic model to a Markov birth-death process, the transition rates are shown to scale linearly with cluster size. This mapping provides a connection between patch statistics and the dynamics of the ecosystem; the "first passage time" for different colonies emerges as a powerful tool that discriminates between endogenous and exogenous clustering mechanisms. Imminent catastrophic shifts (such as desertification) manifest themselves in a drastic change of the stability properties of spatial colonies.


Subject(s)
Ecosystem , Models, Biological , Desert Climate , Population Dynamics , Stochastic Processes , Time Factors
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