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1.
Haematologica ; 102(2): 308-319, 2017 02.
Article in English | MEDLINE | ID: mdl-27758818

ABSTRACT

Current recommendations for diagnosing myelodysplastic syndromes endorse flow cytometry as an informative tool. Most flow cytometry protocols focus on the analysis of progenitor cells and the evaluation of the maturing myelomonocytic lineage. However, one of the most frequently observed features of myelodysplastic syndromes is anemia, which may be associated with dyserythropoiesis. Therefore, analysis of changes in flow cytometry features of nucleated erythroid cells may complement current flow cytometry tools. The multicenter study within the IMDSFlow Working Group, reported herein, focused on defining flow cytometry parameters that enable discrimination of dyserythropoiesis associated with myelodysplastic syndromes from non-clonal cytopenias. Data from a learning cohort were compared between myelodysplasia and controls, and results were validated in a separate cohort. The learning cohort comprised 245 myelodysplasia cases, 290 pathological, and 142 normal controls; the validation cohort comprised 129 myelodysplasia cases, 153 pathological, and 49 normal controls. Multivariate logistic regression analysis performed in the learning cohort revealed that analysis of expression of CD36 and CD71 (expressed as coefficient of variation), in combination with CD71 fluorescence intensity and the percentage of CD117+ erythroid progenitors provided the best discrimination between myelodysplastic syndromes and non-clonal cytopenias (specificity 90%; 95% confidence interval: 84-94%). The high specificity of this marker set was confirmed in the validation cohort (92%; 95% confidence interval: 86-97%). This erythroid flow cytometry marker combination may improve the evaluation of cytopenic cases with suspected myelodysplasia, particularly when combined with flow cytometry assessment of the myelomonocytic lineage.


Subject(s)
Erythroid Cells/metabolism , Erythroid Cells/pathology , Myelodysplastic Syndromes/metabolism , Myelodysplastic Syndromes/pathology , Adult , Age Factors , Aged , Aged, 80 and over , Biomarkers , Bone Marrow Cells/metabolism , Case-Control Studies , Female , Flow Cytometry , Humans , Immunophenotyping , Male , Middle Aged , Young Adult
2.
Microbiology (Reading) ; 161(11): 2192-203, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26374246

ABSTRACT

The phage-shock protein (Psp) response is an extracytoplasmic response system that is vital for maintenance of the cytoplasmic membrane when the cell encounters stressful conditions. The paradigm of the Psp response has been established in Escherichia coli. The response has been shown to be important for survival during the stationary phase, maintenance of the proton motive force across membranes and implicated in virulence. In this study, we identified a putative PspA homologue in Burkholderia pseudomallei, annotated as BPSL2105. Similar to the induction of PspA in E. coli, the expression of B. pseudomallei BPSL2105 was induced by heat shock. Deletion of BPSL2105 resulted in a survival defect in the late stationary phase coincident with dramatic changes in the pH of the culture medium. The B. pseudomallei BPSL2105 deletion mutant also displayed reduced survival in macrophage infection - the first indication that the Psp response plays a role during intracellular pathogenesis in this species. The purified protein formed large oligomeric structures similar to those observed for the PspA protein of E. coli, and PspA homologues in Bacillus, cyanobacteria and higher plants, providing further evidence to support the identification of BPSL2105 as a PspA-like protein in B. pseudomallei.


Subject(s)
Bacterial Proteins/metabolism , Burkholderia pseudomallei/physiology , Heat-Shock Proteins/metabolism , Stress, Physiological , Burkholderia pseudomallei/genetics , Burkholderia pseudomallei/radiation effects , Culture Media/chemistry , Gene Deletion , Gene Expression Profiling , Hot Temperature , Hydrogen-Ion Concentration , Macrophages/immunology , Macrophages/microbiology , Microbial Viability/radiation effects , Protein Multimerization
3.
Infect Immun ; 80(3): 1209-21, 2012 Mar.
Article in English | MEDLINE | ID: mdl-22252864

ABSTRACT

Burkholderia pseudomallei is the causative agent of melioidosis, a disease endemic to regions of Southeast Asia and Northern Australia. Both humans and a range of other animal species are susceptible to melioidosis, and the production of a group 3 polysaccharide capsule in B. pseudomallei is essential for virulence. B. pseudomallei capsular polysaccharide (CPS) I comprises unbranched manno-heptopyranose residues and is encoded by a 34.5-kb locus on chromosome 1. Despite the importance of this locus, the role of all of the genes within this region is unclear. We inactivated 18 of these genes and analyzed their phenotype using Western blotting and immunofluorescence staining. Furthermore, by combining this approach with bioinformatic analysis, we were able to develop a model for CPS I biosynthesis and export. We report that inactivating gmhA, wcbJ, and wcbN in B. pseudomallei K96243 retains the immunogenic integrity of the polysaccharide despite causing attenuation in the BALB/c murine infection model. Mice immunized with the B. pseudomallei K96243 mutants lacking a functional copy of either gmhA or wcbJ were afforded significant levels of protection against a wild-type B. pseudomallei K96243 challenge.


Subject(s)
Biosynthetic Pathways/genetics , Burkholderia pseudomallei/genetics , Burkholderia pseudomallei/metabolism , Polysaccharides, Bacterial/genetics , Polysaccharides, Bacterial/metabolism , Animals , Bacterial Vaccines/administration & dosage , Bacterial Vaccines/genetics , Bacterial Vaccines/immunology , Blotting, Western , Burkholderia pseudomallei/immunology , Female , Fluorescent Antibody Technique , Gene Knockout Techniques , Genetic Loci , Melioidosis/microbiology , Melioidosis/pathology , Mice , Mice, Inbred BALB C , Multigene Family , Polysaccharides, Bacterial/immunology , Vaccines, Attenuated/administration & dosage , Vaccines, Attenuated/genetics , Vaccines, Attenuated/immunology , Virulence , Virulence Factors/genetics , Virulence Factors/immunology , Virulence Factors/metabolism
4.
Infect Immun ; 79(4): 1512-25, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21300775

ABSTRACT

The Burkholderia pseudomallei K96243 genome encodes six type VI secretion systems (T6SSs), but little is known about the role of these systems in the biology of B. pseudomallei. In this study, we purified recombinant Hcp proteins from each T6SS and tested them as vaccine candidates in the BALB/c mouse model of melioidosis. Recombinant Hcp2 protected 80% of mice against a lethal challenge with K96243, while recombinant Hcp1, Hcp3, and Hcp6 protected 50% of mice against challenge. Hcp6 was the only Hcp constitutively produced by B. pseudomallei in vitro; however, it was not exported to the extracellular milieu. Hcp1, on the other hand, was produced and exported in vitro when the VirAG two-component regulatory system was overexpressed in trans. We also constructed six hcp deletion mutants (Δhcp1 through Δhcp6) and tested them for virulence in the Syrian hamster model of infection. The 50% lethal doses (LD(50)s) for the Δhcp2 through Δhcp6 mutants were indistinguishable from K96243 (<10 bacteria), but the LD(50) for the Δhcp1 mutant was >10(3) bacteria. The hcp1 deletion mutant also exhibited a growth defect in RAW 264.7 macrophages and was unable to form multinucleated giant cells in this cell line. Unlike K96243, the Δhcp1 mutant was only weakly cytotoxic to RAW 264.7 macrophages 18 h after infection. The results suggest that the cluster 1 T6SS is essential for virulence and plays an important role in the intracellular lifestyle of B. pseudomallei.


Subject(s)
Gene Expression Profiling , Melioidosis/microbiology , Virulence Factors/metabolism , Amino Acid Sequence , Animals , Bacterial Proteins/genetics , Bacterial Proteins/metabolism , Burkholderia pseudomallei/genetics , Burkholderia pseudomallei/metabolism , Cricetinae , Disease Models, Animal , Electrophoresis, Polyacrylamide Gel , Female , Fluorescent Antibody Technique , Gene Expression , Genes, Bacterial , Humans , Immunoblotting , Liver/microbiology , Liver/pathology , Macrophages/microbiology , Macrophages/pathology , Melioidosis/genetics , Melioidosis/metabolism , Mesocricetus , Mice , Mice, Inbred BALB C , Molecular Sequence Data , Virulence/genetics , Virulence Factors/genetics
5.
J Med Microbiol ; 56(Pt 10): 1268-1276, 2007 Oct.
Article in English | MEDLINE | ID: mdl-17893160

ABSTRACT

Iron is an important nutritional requirement for bacteria due to its conserved role in many essential metabolic processes. As a consequence of the lack of freely available iron in the mammalian host, bacteria upregulate a range of virulence factors during infection. Transcriptional analysis of Francisella tularensis subsp. novicida U112 grown in iron-deficient medium identified 21 genes upregulated in response to this condition, four of which were attributed to a siderophore operon. In addition, a novel iron-regulated gene, FTT0025, was identified which is part of this operon and encodes a 55 kDa hypothetical membrane protein. When grown on chrome azurol S agar, the F. tularensis subsp. novicida U112deltaFTT0025 mutant produced an increased reaction zone compared with the wild-type, suggesting that siderophore production was unaffected but that the bacteria may have a deficiency in their ability to re-sequester this iron-binding molecule. Furthermore, the deltaFTT0025 mutant was attenuated in a BALB/c mouse model of infection relative to wild-type F. tularensis subsp. novicida U112.


Subject(s)
Bacterial Proteins/physiology , Francisella tularensis/pathogenicity , Gene Expression Regulation, Bacterial , Iron/metabolism , Membrane Proteins/physiology , Virulence Factors/physiology , Animals , Bacterial Proteins/chemistry , Bacterial Proteins/genetics , Francisella tularensis/genetics , Gene Deletion , Gene Expression Profiling , Membrane Proteins/chemistry , Membrane Proteins/genetics , Mice , Mice, Inbred BALB C , Molecular Weight , Oligonucleotide Array Sequence Analysis , Survival Analysis , Tularemia/microbiology , Virulence Factors/chemistry , Virulence Factors/genetics
6.
Cytometry B Clin Cytom ; 51(1): 30-40, 2003 Jan.
Article in English | MEDLINE | ID: mdl-12500295

ABSTRACT

Ethylenediaminetetraacetic acid (EDTA) is the anticoagulant recommended for full blood counts, citrate is recommended for coagulation and platelet studies, and citrate-theophylline-adenosine-dipyridamole (CTAD) inhibits platelet activation. Because the combination of EDTA and CTAD (E/C) is better than EDTA or CTAD alone for measuring platelet parameters on the ADVIA 120 Haematology System, we investigated whether it also offers advantages for the flow cytometric assessment of platelet and/or neutrophil activation and platelet-leucocyte aggregate formation ex vivo. Blood from healthy subjects was collected into E/C or citrate, kept at room temperature or at 4 degrees C, and analysed 0 to 360 min later in the ADVIA 120 and by immunofluorescent flow cytometry. Platelet count, mean platelet volume, number of platelet clumps, mean platelet component, numbers of CD62P(+) platelets and platelet-leucocyte aggregates, and expression of CD11b on neutrophils changed little over 360 min in blood with E/C kept at 4 degrees C. In contrast, one or more parameter changed when blood was kept with E/C at ambient temperature or with citrate at either temperature. The use of E/C in in vitro and in vivo studies is illustrated. Platelet and neutrophil activation status ex vivo can be reliably assessed if blood is collected into E/C, held at 4 degrees C, and analysed within 6 h.


Subject(s)
Anticoagulants , Edetic Acid , Flow Cytometry/methods , Neutrophil Activation , Platelet Activation , Adenosine , Adult , Blood Platelets/chemistry , Blood Platelets/cytology , CD11b Antigen/analysis , Citrates , Dipyridamole , Female , Humans , L-Selectin/analysis , Leukocyte Common Antigens/analysis , Male , Membrane Glycoproteins/analysis , Middle Aged , Neutrophils/chemistry , Neutrophils/cytology , P-Selectin/analysis , Particle Size , Theophylline
7.
Leuk Lymphoma ; 54(3): 472-5, 2013 Mar.
Article in English | MEDLINE | ID: mdl-22916713

ABSTRACT

An international working group within the European LeukemiaNet gathered, aiming to determine the role of flow cytometry (FC) in myelodysplastic syndromes (MDS). It was agreed that FC has a substantial application in disease characterization, diagnosis and prognosis. FC may also be useful in predicting treatment responses and monitoring novel and standard therapeutic regimens. In this article the rationale is discussed that flow cytometry should be integrated as a part of diagnostic and prognostic scoring systems in MDS.


Subject(s)
Flow Cytometry/methods , Myelodysplastic Syndromes/diagnosis , Myelodysplastic Syndromes/therapy , Outcome Assessment, Health Care/methods , Humans , International Agencies , Myelodysplastic Syndromes/classification , Prognosis , Reproducibility of Results , Sensitivity and Specificity , Societies, Scientific
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