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1.
vCOMBAT: a novel tool to create and visualize a computational model of bacterial antibiotic target-binding.
BMC Bioinformatics
; 23(1): 22, 2022 Jan 06.
Article
in English
| MEDLINE | ID: mdl-34991453
2.
Shigella sonnei infection of zebrafish reveals that O-antigen mediates neutrophil tolerance and dysentery incidence.
PLoS Pathog
; 15(12): e1008006, 2019 12.
Article
in English
| MEDLINE | ID: mdl-31830135
3.
Horizontal DNA Transfer Mechanisms of Bacteria as Weapons of Intragenomic Conflict.
PLoS Biol
; 14(3): e1002394, 2016 Mar.
Article
in English
| MEDLINE | ID: mdl-26934590
4.
Efficient Inference of Recent and Ancestral Recombination within Bacterial Populations.
Mol Biol Evol
; 34(5): 1167-1182, 2017 05 01.
Article
in English
| MEDLINE | ID: mdl-28199698
5.
Pneumococcal Capsule Synthesis Locus cps as Evolutionary Hotspot with Potential to Generate Novel Serotypes by Recombination.
Mol Biol Evol
; 34(10): 2537-2554, 2017 10 01.
Article
in English
| MEDLINE | ID: mdl-28595308
6.
Heterogeneity in the frequency and characteristics of homologous recombination in pneumococcal evolution.
PLoS Genet
; 10(5): e1004300, 2014 May.
Article
in English
| MEDLINE | ID: mdl-24786281
7.
Evolution of stress response in the face of unreliable environmental signals.
PLoS Comput Biol
; 8(8): e1002627, 2012.
Article
in English
| MEDLINE | ID: mdl-22916000
8.
Estimating the fitness cost of escape from HLA presentation in HIV-1 protease and reverse transcriptase.
PLoS Comput Biol
; 8(5): e1002525, 2012.
Article
in English
| MEDLINE | ID: mdl-22654656
9.
Ongoing shuffling of protein fragments diversifies core viral functions linked to interactions with bacterial hosts.
Nat Commun
; 14(1): 7460, 2023 Nov 28.
Article
in English
| MEDLINE | ID: mdl-38016962
10.
Non-genetic inheritance and the patterns of antagonistic coevolution.
BMC Evol Biol
; 12: 93, 2012 Jun 21.
Article
in English
| MEDLINE | ID: mdl-22720868
11.
The impact of environmental change on host-parasite coevolutionary dynamics.
Proc Biol Sci
; 278(1716): 2283-92, 2011 Aug 07.
Article
in English
| MEDLINE | ID: mdl-21177684
12.
Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales.
ISME J
; 14(7): 1713-1730, 2020 07.
Article
in English
| MEDLINE | ID: mdl-32249276
13.
Horizontal gene transfer rate is not the primary determinant of observed antibiotic resistance frequencies in Streptococcus pneumoniae.
Sci Adv
; 6(21): eaaz6137, 2020 05.
Article
in English
| MEDLINE | ID: mdl-32671212
14.
Diversity-Generating Machines: Genetics of Bacterial Sugar-Coating.
Trends Microbiol
; 26(12): 1008-1021, 2018 12.
Article
in English
| MEDLINE | ID: mdl-30037568
15.
Correction to: Diversity and evolution of surface polysaccharide synthesis loci in Enterobacteriales.
ISME J
; 16(5): 1478, 2022 May.
Article
in English
| MEDLINE | ID: mdl-35046560
16.
Evolution of the Staphylococcus argenteus ST2250 Clone in Northeastern Thailand Is Linked with the Acquisition of Livestock-Associated Staphylococcal Genes.
mBio
; 8(4)2017 07 05.
Article
in English
| MEDLINE | ID: mdl-28679748
17.
The role of recombination for the coevolutionary dynamics of HIV and the immune response.
PLoS One
; 6(2): e16052, 2011 Feb 18.
Article
in English
| MEDLINE | ID: mdl-21364750
18.
On the evolution of sexual reproduction in hosts coevolving with multiple parasites.
Evolution
; 64(6): 1644-56, 2010 Jun.
Article
in English
| MEDLINE | ID: mdl-20100222
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