PulmoNet: a novel deep learning based pulmonary diseases detection model.

Pulmonary diseases are various pathological conditions that affect respiratory tissues and organs, making the exchange of gas challenging for animals inhaling and exhaling. It varies from gentle and self-limiting such as the common cold and catarrh, to life-threatening ones, such as viral pneumonia (VP), bacterial pneumonia (BP), and tuberculosis, as well as a severe acute respiratory syndrome, such as the coronavirus 2019 (COVID-19). The cost of diagnosis and treatment of pulmonary infections is on the high side, most especially in developing countries, and since radiography images (X-ray and computed tomography (CT) scan images) have proven beneficial in detecting various pulmonary infections, many machine learning (ML) models and image processing procedures have been utilized to identify these infections. The need for timely and accurate detection can be lifesaving, especially during a pandemic. This paper, therefore, suggested a deep convolutional neural network (DCNN) founded image detection model, optimized with image augmentation technique, to detect three (3) different pulmonary diseases (COVID-19, bacterial pneumonia, and viral pneumonia). The dataset containing four (4) different classes (healthy (10,325), COVID-19 (3,749), BP (883), and VP (1,478)) was utilized as training/testing data for the suggested model. The model's performance indicates high potential in detecting the three (3) classes of pulmonary diseases. The model recorded average detection accuracy of 94%, 95.4%, 99.4%, and 98.30%, and training/detection time of about 60/50 s. This result indicates the proficiency of the suggested approach when likened to the traditional texture descriptors technique of pulmonary disease recognition utilizing X-ray and CT scan images. This study introduces an innovative deep convolutional neural network model to enhance the detection of pulmonary diseases like COVID-19 and pneumonia using radiography. This model, notable for its accuracy and efficiency, promises significant advancements in medical diagnostics, particularly beneficial in developing countries due to its potential to surpass traditional diagnostic methods.

MobileNet-SVM: A Lightweight Deep Transfer Learning Model to Diagnose BCH Scans for IoMT-Based Imaging Sensors.

Many individuals worldwide pass away as a result of inadequate procedures for prompt illness identification and subsequent treatment. A valuable life can be saved or at least extended with the early identification of serious illnesses, such as various cancers and other life-threatening conditions. The development of the Internet of Medical Things (IoMT) has made it possible for healthcare technology to offer the general public efficient medical services and make a significant contribution to patients' recoveries. By using IoMT to diagnose and examine BreakHis v1 400× breast cancer histology (BCH) scans, disorders may be quickly identified and appropriate treatment can be given to a patient. Imaging equipment having the capability of auto-analyzing acquired pictures can be used to achieve this. However, the majority of deep learning (DL)-based image classification approaches are of a large number of parameters and unsuitable for application in IoMT-centered imaging sensors. The goal of this study is to create a lightweight deep transfer learning (DTL) model suited for BCH scan examination and has a good level of accuracy. In this study, a lightweight DTL-based model "MobileNet-SVM", which is the hybridization of MobileNet and Support Vector Machine (SVM), for auto-classifying BreakHis v1 400× BCH images is presented. When tested against a real dataset of BreakHis v1 400× BCH images, the suggested technique achieved a training accuracy of 100% on the training dataset. It also obtained an accuracy of 91% and an F1-score of 91.35 on the test dataset. Considering how complicated BCH scans are, the findings are encouraging. The MobileNet-SVM model is ideal for IoMT imaging equipment in addition to having a high degree of precision. According to the simulation findings, the suggested model requires a small computation speed and time.

A novel smartphone application for early detection of habanero disease.

Habanero plant diseases can significantly reduce crop yield and quality, making early detection and treatment crucial for farmers. In this study, we discuss the creation of a modified VGG16 (MVGG16) Deep Transfer Learning (DTL) model-based smartphone app for identifying habanero plant diseases. With the help of the smartphone application, growers can quickly diagnose the health of a habanero plant by taking a photo of one of its leaves. We trained the DTL model on a dataset of labelled images of healthy and infected habanero plants and evaluated its performance on a separate test dataset. The MVGG16 DTL algorithm had an accuracy, precision, f1-score, recall and AUC of 98.79%, 97.93%, 98.44%, 98.95 and 98.63%, respectively, on the testing dataset. The MVGG16 DTL model was then integrated into a smartphone app that enables users to upload photographs, get diagnosed, and explore a history of earlier diagnoses. We tested the software on a collection of photos of habanero plant leaves and discovered that it was highly accurate at spotting infected plants. The smartphone software can boost early identification and treatment of habanero plant diseases, resulting in higher crop output and higher-quality harvests.

Enhancing Skin Cancer Detection and Classification in Dermoscopic Images through Concatenated MobileNetV2 and Xception Models.

One of the most promising research initiatives in the healthcare field is focused on the rising incidence of skin cancer worldwide and improving early discovery methods for the disease. The most significant factor in the fatalities caused by skin cancer is the late identification of the disease. The likelihood of human survival may be significantly improved by performing an early diagnosis followed by appropriate therapy. It is not a simple process to extract the elements from the photographs of the tumors that may be used for the prospective identification of skin cancer. Several deep learning models are widely used to extract efficient features for a skin cancer diagnosis; nevertheless, the literature demonstrates that there is still room for additional improvements in various performance metrics. This study proposes a hybrid deep convolutional neural network architecture for identifying skin cancer by adding two main heuristics. These include Xception and MobileNetV2 models. Data augmentation was introduced to balance the dataset, and the transfer learning technique was utilized to resolve the challenges of the absence of labeled datasets. It has been detected that the suggested method of employing Xception in conjunction with MobileNetV2 attains the most excellent performance, particularly concerning the dataset that was evaluated: specifically, it produced 97.56% accuracy, 97.00% area under the curve, 100% sensitivity, 93.33% precision, 96.55% F1 score, and 0.0370 false favorable rates. This research has implications for clinical practice and public health, offering a valuable tool for dermatologists and healthcare professionals in their fight against skin cancer.

Corrigendum to "A decision support system for multi-target disease diagnosis: A bioinformatics approach"[Heliyon 6 (3), (March 2020) Article e03657].

[This corrects the article DOI: 10.1016/j.heliyon.2020.e03657.].

Strengthening Bioinformatics and Genomics Analyses Skills in Africa for Attainment of the Sustainable Development Goals: Report of the 2nd Conference of the Nigerian Bioinformatics and Genomics Network.

The second conference of the Nigerian Bioinformatics and Genomics Network (NBGN21) was held from October 11 to October 13, 2021. The event was organized by the Nigerian Bioinformatics and Genomics Network. A 1-day genomic analysis workshop on genome-wide association study and polygenic risk score analysis was organized as part of the conference. It was organized primarily as a research capacity building initiative to empower Nigerian researchers to take a leading role in this cutting-edge field of genomic data science. The theme of the conference was "Leveraging Bioinformatics and Genomics for the attainments of the Sustainable Development Goals." The conference used a hybrid approach-virtual and in-person. It served as a platform to bring together 235 registered participants mainly from Nigeria and virtually, from all over the world. NBGN21 had four keynote speakers and four leading Nigerian scientists received awards for their contributions to genomics and bioinformatics development in Nigeria. A total of 100 travel fellowships were awarded to delegates within Nigeria. A major topic of discussion was the application of bioinformatics and genomics in the achievement of the Sustainable Development Goals (SDG3-Good Health and Well-Being, SDG4-Quality Education, and SDG 15-Life on Land [Biodiversity]). In closing, most of the NBGN21 conference participants were interviewed and interestingly they agreed that bioinformatics and genomic analysis of African genomes are vital in identifying population-specific genetic variants that confer susceptibility to different diseases that are endemic in Africa. The knowledge of this can empower African healthcare systems and governments for timely intervention, thereby enhancing good health and well-being.

The network structure of depressive symptomatology in Peruvian adults with arterial hypertension.

Background: Globally, arterial hypertension (AH) has increased by 90% over the last four decades, and has increased by 1.6% in Peru over the previous four years. Scientific evidence indicates the prevalence of depressive symptoms in patients with AH and its importance in the comprehensive evaluation of the adult for adherence to clinical treatment. Previous studies carried out in the Peruvian population with AH mostly report the prevalence and associations, but do not indicate which depressive symptoms are more relevant in patients with AH. This study involved a network analysis of depressive symptomatology in Peruvian patients with AH using network estimation. Network analysis is used in this study for analysis, control, and monitoring purposes. Method: A representative cross-sectional study at the national level, using secondary data from 2019 Demographic and Family Health Survey (ENDES) was performed. The sample used included men and women of age over 17 years diagnosed with AH and was able to respond to Patient Health Questionnaire-9 (PHQ-9). Results: The symptoms of depressive mood (bridging force and centrality) and energy fatigue or loss (bridge centrality) play an essential role in the network structure, as does the feeling of uselessness in terms of closeness and intermediation. Conclusion: The study highlighted the symptoms related to depressive mood and energy fatigue or loss as bridging symptoms, which could trigger a depressive episode in patients diagnosed with AH. The results will contribute to developing personalized treatments aimed at patients with specific depressive symptoms who have also been diagnosed with AH. The study analysis presents statistical coefficients of effect size (≤ 0,1 = small; > 0,1 to < 0,5 = moderate; ≥ 0,5 = large) to determine network connections.

Machine Learning-Based Predictive Farmland Optimization and Crop Monitoring System.

E-agriculture is the integration of technology and digital mechanisms into agricultural processes for more efficient output. This study provided a machine learning-aided mobile system for farmland optimization, using various inputs such as location, crop type, soil type, soil pH, and spacing. Random forest algorithm and BigML were employed to analyze and classify datasets containing crop features that generated subclasses based on random crop feature parameters. The subclasses were further grouped into three main classes to match the crops using data from the companion crops. The study concluded that the approach aided decision making and also assisted in the design of a mobile application using Appery.io. This Appery.io then took in some user input parameters, thereby offering various optimization sets. It was also deduced that the system led to users' optimization of information when implemented on their farmlands.

Predictive modeling of COVID-19 death cases in Pakistan.

BACKGROUND: The world is presently facing the challenges posed by COVID-19 (2019-nCoV), especially in the public health sector, and these challenges are dangerous to both health and life. The disease results in an acute respiratory infection that may result in pain and death. In Pakistan, the disease curve shows a vertical trend by almost 256K established cases of the diseases and 6035 documented death cases till August 5, 2020. OBJECTIVE: The primary purpose of this study is to provide the statistical model to predict the trend of COVID-19 death cases in Pakistan. The age and gender of COVID-19 victims were represented using a descriptive study. METHOD: ology: Three regression models, which include Linear, logarithmic, and quadratic, were employed in this study for the modelling of COVID-19 death cases in Pakistan. These three models were compared based on R2, Adjusted R2, AIC, and BIC criterions. The data utilized for the modelling was obtained from the National Institute of Health of Pakistan from February 26, 2020 to August 5, 2020. CONCLUSION: The finding deduced after the prediction modelling is that the rate of mortality would decrease by the end of October. The total number of deaths will reach its maximum point; then, it will gradually decrease. This indicates that the curve of total deaths will continue to be flat, i.e., it will shift to be constant, which is also the upper bound of the underlying function of absolute death.

COVID-19 prevalence estimation: Four most affected African countries.

The world at large has been confronted with several disease outbreak which has posed and still posing a serious menace to public health globally. Recently, COVID-19 a new kind of coronavirus emerge from Wuhan city in China and was declared a pandemic by the World Health Organization. There has been a reported case of about 8622985 with global death of 457,355 as of 15.05 GMT, June 19, 2020. South-Africa, Egypt, Nigeria and Ghana are the most affected African countries with this outbreak. Thus, there is a need to monitor and predict COVID-19 prevalence in this region for effective control and management. Different statistical tools and time series model such as the linear regression model and autoregressive integrated moving average (ARIMA) models have been applied for disease prevalence/incidence prediction in different diseases outbreak. However, in this study, we adopted the ARIMA model to forecast the trend of COVID-19 prevalence in the aforementioned African countries. The datasets examined in this analysis spanned from February 21, 2020, to June 16, 2020, and was extracted from the World Health Organization website. ARIMA models with minimum Akaike information criterion correction (AICc) and statistically significant parameters were selected as the best models. Accordingly, the ARIMA (0,2,3), ARIMA (0,1,1), ARIMA (3,1,0) and ARIMA (0,1,2) models were chosen as the best models for SA, Nigeria, and Ghana and Egypt, respectively. Forecasting was made based on the best models. It is noteworthy to claim that the ARIMA models are appropriate for predicting the prevalence of COVID-19. We noticed a form of exponential growth in the trend of this virus in Africa in the days to come. Thus, the government and health authorities should pay attention to the pattern of COVID-19 in Africa. Necessary plans and precautions should be put in place to curb this pandemic in Africa.

A decision support system for multi-target disease diagnosis: A bioinformatics approach.

Malaria and typhoid fever are revered for their ability to individually or jointly cause high mortality rate. Both malaria and typhoid fever have similar symptoms and are famous for their co-existence in the human body, hence, causes problem of under-diagnosis when doctors tries to determine the exact disease out of the two diseases. This paper proposes a Bioinformatics Based Decision Support System (BBDSS) for malaria, typhoid and malaria typhoid diagnosis. The system is a hybrid of expert system and global alignment with constant penalty. The architecture of the proposed system takes input diagnosis sequence and benchmark diagnosis sequences through the browser, store these diagnosis sequences in the Knowledge base and set up the IF-THEN rules guiding the diagnosis decisions for malaria, typhoid and malaria typhoid respectively. The matching engine component of the system receives as input the input sequence and applies global alignment technique with constant penalty for the matching between the input sequence and the three benchmark sequences in turns. The global alignment technique with constant penalty applies its pre-defined process to generate optimal alignment and determine the disease condition of the patient through alignment scores comparison for the three benchmark diagnosis sequences. In order to evaluate the proposed system, ANOVA was used to compare the means of the three independent groups (malaria, typhoid and malaria typhoid) to determine whether there is statistical evidence that the associated values on the diagnosis variables means are significantly different. The ANOVA results indicated that the mean of the values on diagnosis variables is significantly different for at least one of the disease status groups. Similarly, multiple comparisons tests was further used to explicitly identify which means were different from one another. The multiple comparisons results showed that there is a statistically significant difference in the values on the diagnosis variables to diagnose the disease conditions between the groups of malaria and malaria typhoid. Conversely, there were no differences between the groups of malaria and typhoid fever as well as between the groups of typhoid fever and malaria typhoid. In order to show mean difference in the diagnosis scores between the orthodox and the proposed diagnosis system, t-test statistics was used. The results of the t-test statistics indicates that the mean values of diagnosis from the orthodox system differ from those of the proposed system. Finally, the evaluation of the proposed diagnosis system is most efficient at providing diagnosis for malaria and malaria typhoid at 97% accuracy.

Predictive modelling of COVID-19 confirmed cases in Nigeria.

The coronavirus outbreak is the most notable world crisis since the Second World War. The pandemic that originated from Wuhan, China in late 2019 has affected all the nations of the world and triggered a global economic crisis whose impact will be felt for years to come. This necessitates the need to monitor and predict COVID-19 prevalence for adequate control. The linear regression models are prominent tools in predicting the impact of certain factors on COVID-19 outbreak and taking the necessary measures to respond to this crisis. The data was extracted from the NCDC website and spanned from March 31, 2020 to May 29, 2020. In this study, we adopted the ordinary least squares estimator to measure the impact of travelling history and contacts on the spread of COVID-19 in Nigeria and made a prediction. The model was conducted before and after travel restriction was enforced by the Federal government of Nigeria. The fitted model fitted well to the dataset and was free of any violation based on the diagnostic checks conducted. The results show that the government made a right decision in enforcing travelling restriction because we observed that travelling history and contacts made increases the chances of people being infected with COVID-19 by 85% and 88% respectively. This prediction of COVID-19 shows that the government should ensure that most travelling agency should have better precautions and preparations in place before re-opening.

An Android based blood bank information retrieval system.

Background: Blood Bank record keeping has been carried out manually over the past decades using paper file management system which is slow for information retrieval and processing and also prone to errors in an emergency situation. Materials and methods: This research work solves the above-mentioned problem with the development of both web-based and Android-based blood bank information retrieval system. The web application is used by various blood banks system administrators to update their available blood inventory information and the mobile application which has the mobile search engine is used to search for blood supplies from the registered blood banks. Results and conclusion: The system also has a feature that allows registered blood banks to send a notification to registered blood donors on the application requesting for blood donation.

Evaluation of the scholastic performance of students in 12 programs from a private university in the south-west geopolitical zone in Nigeria.

Cumulative grade point average (CGPA) is a system for calculation of GPA scores and is one way to determine a student's academic performance in a university setting. In Nigeria, an employer evaluates a student's academic performance using their CGPA score. For this study, data were collected from a student database of a private school in the south-west geopolitical zone in Nigeria. Regression analysis, correlation analysis, and analysis of variance (F-test) were employed to determine the study year that students perform better based on CGPA. According to the results, it was observed that students perform much better in year three (300 Level) and year four (400 Level) compared to other levels. In conclusion, we strongly recommend the private university to introduce program that will improve the academic performance of students from year one (100 level).

Data on expenditure, revenue, and economic growth in Nigeria.

This article describes the data for examining the influence of government expenditure and revenue on Nigerian economic growth. Data were extracted from the World Bank database and Central Bank of Nigeria (CBN) Statistical bulletin. The data are available with this article. The data is related to the research article "Newly proposed estimator for ridge parameter: an application to the Nigerian economy" (Lukman and Arowolo, 2018) but not discussed in detail. This data article will assist economists in identifying factors that will affect the economy of a country, especially in the African region.