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1.
Cell ; 142(2): 270-83, 2010 Jul 23.
Article in English | MEDLINE | ID: mdl-20655468

ABSTRACT

Mechanisms that regulate cellular metabolism are a fundamental requirement of all cells. Most eukaryotic cells rely on aerobic mitochondrial metabolism to generate ATP. Nevertheless, regulation of mitochondrial activity is incompletely understood. Here we identified an unexpected and essential role for constitutive InsP(3)R-mediated Ca(2+) release in maintaining cellular bioenergetics. Macroautophagy provides eukaryotes with an adaptive response to nutrient deprivation that prolongs survival. Constitutive InsP(3)R Ca(2+) signaling is required for macroautophagy suppression in cells in nutrient-replete media. In its absence, cells become metabolically compromised due to diminished mitochondrial Ca(2+) uptake. Mitochondrial uptake of InsP(3)R-released Ca(2+) is fundamentally required to provide optimal bioenergetics by providing sufficient reducing equivalents to support oxidative phosphorylation. Absence of this Ca(2+) transfer results in enhanced phosphorylation of pyruvate dehydrogenase and activation of AMPK, which activates prosurvival macroautophagy. Thus, constitutive InsP(3)R Ca(2+) release to mitochondria is an essential cellular process that is required for efficient mitochondrial respiration and maintenance of normal cell bioenergetics.


Subject(s)
B-Lymphocytes/metabolism , Calcium Signaling , Inositol 1,4,5-Trisphosphate Receptors/metabolism , Mitochondria/metabolism , Oxidative Phosphorylation , Animals , Autophagy , Calcium/metabolism , Cell Line , Chickens , Gene Knockout Techniques
2.
J Chem Ecol ; 2024 Apr 22.
Article in English | MEDLINE | ID: mdl-38644438

ABSTRACT

Diatoms are key primary producers across marine, freshwater, and terrestrial ecosystems. They are responsible for photosynthesis and secondary production that, in part, support complex food webs. Diatoms can produce phytochemicals that have transtrophic ecological effects which increase their competitive fitness. Polyunsaturated aldehydes (PUAs) are one class of diatom-derived phytochemicals that are known to have allelopathic and anti-herbivory properties. The anti-herbivory capability of PUAs results from their negative effect on grazer fecundity. Since their discovery, research has focused on their production by pelagic marine diatoms, and their effects on copepod egg production, hatching success, and juvenile survival and development. Few investigations have explored PUA production by the prolific suite of benthic marine diatoms, despite their importance to coastal trophic systems. In this study, we tested eight species of benthic diatoms for the production of the bioactive PUAs 2,4-heptadienal, 2,4-octadienal, and 2,4-decadienal. Benthic diatom species were isolated from the Salish Sea, an inland sea within the North Pacific ecosystem. All species were found to be producers of at least two PUAs in detectable concentrations, with five species producing all three PUAs in quantifiable concentrations. Our results indicate that production of PUAs from Salish Sea benthic diatoms may be widespread, and thus these compounds may contribute to benthic coastal food web dynamics through heretofore unrecognized pathways. Future studies should expand the geographic scope of investigations into benthic diatom PUA production and explore the effects of benthic diatoms on benthic consumer fecundity.

3.
Proc Natl Acad Sci U S A ; 117(33): 20088-20099, 2020 08 18.
Article in English | MEDLINE | ID: mdl-32732436

ABSTRACT

T lymphocyte motility and interaction dynamics with other immune cells are vital determinants of immune responses. Regulatory T (Treg) cells prevent autoimmune disorders by suppressing excessive lymphocyte activity, but how interstitial motility patterns of Treg cells limit neuroinflammation is not well understood. We used two-photon microscopy to elucidate the spatial organization, motility characteristics, and interactions of endogenous Treg and Th17 cells together with antigen-presenting cells (APCs) within the spinal cord leptomeninges in experimental autoimmune encephalomyelitis (EAE), an animal model of multiple sclerosis. Th17 cells arrive before the onset of clinical symptoms, distribute uniformly during the peak, and decline in numbers during later stages of EAE. In contrast, Treg cells arrive after Th17 cells and persist during the chronic phase. Th17 cells meander widely, interact with APCs, and exhibit cytosolic Ca2+ transients and elevated basal Ca2+ levels before the arrival of Treg cells. In contrast, Treg cells adopt a confined, repetitive-scanning motility while contacting APCs. These locally confined but highly motile Treg cells limit Th17 cells from accessing APCs and suppress Th17 cell Ca2+ signaling by a mechanism that is upstream of store-operated Ca2+ entry. Finally, Treg cell depletion increases APC numbers in the spinal cord and exaggerates ongoing neuroinflammation. Our results point to fundamental differences in motility characteristics between Th17 and Treg cells in the inflamed spinal cord and reveal three potential cellular mechanisms by which Treg cells regulate Th17 cell effector functions: reduction of APC density, limiting access of Th17 cells to APCs, and suppression of Th17 Ca2+ signaling.


Subject(s)
Calcium Signaling/physiology , Spinal Cord/metabolism , Th17 Cells/metabolism , Animals , Autoantigens , Female , Forkhead Transcription Factors/genetics , Forkhead Transcription Factors/metabolism , Green Fluorescent Proteins , Male , Mice , Mice, Inbred C57BL , Myelin Sheath , T-Lymphocytes, Regulatory
4.
Semin Cell Dev Biol ; 94: 3-10, 2019 10.
Article in English | MEDLINE | ID: mdl-30703557

ABSTRACT

The patterning of cytosolic Ca2+ signals in space and time underlies their ubiquitous ability to specifically regulate numerous cellular processes. Signals mediated by liberation of Ca2+ sequestered in the endoplasmic reticulum (ER) through inositol trisphosphate receptor (IP3R) channels constitute a hierarchy of events; ranging from openings of individual IP3 channels, through the concerted openings of several clustered IP3Rs to generate local Ca2+ puffs, to global Ca2+ waves and oscillations that engulf the entire cell. Here, we review recent progress in elucidating how this hierarchy is shaped by an interplay between the functional gating properties of IP3Rs and their spatial distribution within the cell. We focus in particular on the subset of IP3Rs that are organized in stationary clusters and are endowed with the ability to preferentially liberate Ca2+.


Subject(s)
Calcium Signaling , Calcium/metabolism , Inositol 1,4,5-Trisphosphate Receptors/metabolism , Inositol 1,4,5-Trisphosphate/metabolism , Animals , Humans
5.
Magn Reson Med ; 86(1): 308-319, 2021 07.
Article in English | MEDLINE | ID: mdl-33608954

ABSTRACT

PURPOSE: Provide a direct, non-invasive diagnostic measure of microscopic tissue texture in the size scale between tens of microns and the much larger scale measurable by clinical imaging. This paper presents a method and data demonstrating the ability to measure these microscopic pathologic tissue textures (histology) in the presence of subject motion in an MR scanner. This size range is vital to diagnosing a wide range of diseases. THEORY/METHODS: MR micro-Texture (MRµT) resolves these textures by a combination of measuring a targeted set of k-values to characterize texture-as in diffraction analysis of materials, performing a selective internal excitation to isolate a volume of interest (VOI), applying a high k-value phase encode to the excited spins in the VOI, and acquiring each individual k-value data point in a single excitation-providing motion immunity and extended acquisition time for maximizing signal-to-noise ratio. Additional k-value measurements from the same tissue can be made to characterize the tissue texture in the VOI-there is no need for these additional measurements to be spatially coherent as there is no image to be reconstructed. This method was applied to phantoms and tissue specimens including human prostate tissue. RESULTS: Data demonstrating resolution <50 µm, motion immunity, and clearly differentiating between normal and cancerous tissue textures are presented. CONCLUSION: The data reveal textural differences not resolvable by standard MR imaging. As MRµT is a pulse sequence, it is directly translatable to MRI scanners currently in clinical practice to meet the need for further improvement in cancer imaging.


Subject(s)
Magnetic Resonance Imaging , Humans , Male , Motion , Phantoms, Imaging , Signal-To-Noise Ratio
6.
Biophys J ; 115(11): 2141-2151, 2018 12 04.
Article in English | MEDLINE | ID: mdl-30447989

ABSTRACT

To couple the fidelity of patch-clamp recording with a more high-throughput screening capability, we pioneered a, to our knowledge, novel approach to single-channel recording that we named "optical patch clamp." By using highly sensitive fluorescent Ca2+ indicator dyes in conjunction with total internal fluorescence microscopy techniques, we monitor Ca2+ flux through individual Ca2+-permeable channels. This approach provides information about channel gating analogous to patch-clamp recording at a time resolution of ∼2 ms with the additional advantage of being massively parallel, providing simultaneous and independent recording from thousands of channels in the native environment. However, manual analysis of the data generated by this technique presents severe challenges because a video recording can include many thousands of frames. To overcome this bottleneck, we developed an image processing and analysis framework called CellSpecks capable of detecting and fully analyzing the kinetics of ion channels within a video sequence. By using randomly generated synthetic data, we tested the ability of CellSpecks to rapidly and efficiently detect and analyze the activity of thousands of ion channels, including openings for a few milliseconds. Here, we report the use of CellSpecks for the analysis of experimental data acquired by imaging muscle nicotinic acetylcholine receptors and the Alzheimer's disease-associated amyloid ß pores with multiconductance levels in the plasma membrane of Xenopus laevis oocytes. We show that CellSpecks can accurately and efficiently generate location maps and create raw and processed fluorescence time traces; histograms of mean open times, mean close times, open probabilities, durations, and maximal amplitudes; and a "channel chip" showing the activity of all channels as a function of time. Although we specifically illustrate the application of CellSpecks for analyzing data from Ca2+ channels, it can be easily customized to analyze other spatially and temporally localized signals.


Subject(s)
Amyloid beta-Peptides/metabolism , Calcium Channels/metabolism , Cell Membrane/metabolism , Oocytes/metabolism , Receptors, Nicotinic/metabolism , Software , Xenopus laevis/metabolism , Animals , Calcium/metabolism , Ion Channel Gating , Muscle, Skeletal/metabolism , Oocytes/cytology
7.
Biophys J ; 115(1): 9-21, 2018 07 03.
Article in English | MEDLINE | ID: mdl-29972815

ABSTRACT

Experimental records of single molecules or ion channels from fluorescence microscopy and patch-clamp electrophysiology often include high-frequency noise and baseline fluctuations that are not generated by the system under investigation and have to be removed. Moreover, multiple channels or conductance levels can be present at a time in the data that need to be quantified to accurately understand the behavior of the system. Manual procedures for removing these fluctuations and extracting conducting states or multiple channels are laborious, prone to subjective bias, and likely to hinder the processing of often very large data sets. We introduce a maximal likelihood formalism for separating signal from a noisy and drifting background such as fluorescence traces from imaging of elementary Ca2+ release events called puffs arising from clusters of channels, and patch-clamp recordings of ion channels. Parameters such as the number of open channels or conducting states, noise level, and background signal can all be optimized using the expectation-maximization algorithm. We implement our algorithm following the Baum-Welch approach to expectation-maximization in the portable Java language with a user-friendly graphical interface and test the algorithm on both synthetic and experimental data from the patch-clamp electrophysiology of Ca2+ channels and fluorescence microscopy of a cluster of Ca2+ channels and Ca2+ channels with multiple conductance levels. The resulting software is accurate, fast, and provides detailed information usually not available through manual analysis. Options for visual inspection of the raw and processed data with key parameters are provided, in addition to a range of statistics such as the mean open probabilities, mean open times, mean close times, dwell-time distributions for different number of channels open or conductance levels, amplitude distribution of all opening events, and number of transitions between different number of open channels or conducting levels in asci format with a single click.


Subject(s)
Image Processing, Computer-Assisted/methods , Microscopy, Fluorescence , Signal-To-Noise Ratio , Software , Automation , Patch-Clamp Techniques
8.
Immunity ; 29(4): 602-14, 2008 Oct 17.
Article in English | MEDLINE | ID: mdl-18835197

ABSTRACT

Effector memory T (Tem) cells are essential mediators of autoimmune disease and delayed-type hypersensitivity (DTH), a convenient model for two-photon imaging of Tem cell participation in an inflammatory response. Shortly (3 hr) after entry into antigen-primed ear tissue, Tem cells stably attached to antigen-bearing antigen-presenting cells (APCs). After 24 hr, enlarged Tem cells were highly motile along collagen fibers and continued to migrate rapidly for 18 hr. Tem cells rely on voltage-gated Kv1.3 potassium channels to regulate calcium signaling. ShK-186, a specific Kv1.3 blocker, inhibited DTH and suppressed Tem cell enlargement and motility in inflamed tissue but had no effect on homing to or motility in lymph nodes of naive and central memory T (Tcm) cells. ShK-186 effectively treated disease in a rat model of multiple sclerosis. These results demonstrate a requirement for Kv1.3 channels in Tem cells during an inflammatory immune response in peripheral tissues. Targeting Kv1.3 allows for effector memory responses to be suppressed while central memory responses remain intact.


Subject(s)
Antigen-Presenting Cells/immunology , Hypersensitivity, Delayed/immunology , Immunologic Memory , Kv1.3 Potassium Channel/antagonists & inhibitors , Potassium Channel Blockers/pharmacology , T-Lymphocytes/immunology , Animals , Antigen-Presenting Cells/metabolism , Cell Movement/drug effects , Chlamydia Infections/drug therapy , Chlamydia Infections/immunology , Chlamydia trachomatis/immunology , Collagen , Encephalomyelitis, Autoimmune, Experimental/drug therapy , Encephalomyelitis, Autoimmune, Experimental/immunology , Female , Hypersensitivity, Delayed/metabolism , Immunologic Memory/drug effects , Kv1.3 Potassium Channel/metabolism , Lymph Nodes/cytology , Lymph Nodes/immunology , Lymphocyte Activation/drug effects , Orthomyxoviridae/immunology , Orthomyxoviridae Infections/drug therapy , Orthomyxoviridae Infections/immunology , Ovalbumin/immunology , Potassium Channel Blockers/administration & dosage , Potassium Channel Blockers/therapeutic use , Proteins/pharmacology , Rats , Rats, Inbred Lew , Receptors, CCR7/immunology , T-Lymphocytes/drug effects , T-Lymphocytes/metabolism
9.
Proc Natl Acad Sci U S A ; 111(22): E2349-55, 2014 Jun 03.
Article in English | MEDLINE | ID: mdl-24843159

ABSTRACT

Neural precursor cells (NPCs) offer a promising approach for treating demyelinating diseases. However, the cellular dynamics that underlie transplanted NPC-mediated remyelination have not been described. Using two-photon imaging of a newly developed ventral spinal cord preparation and a viral model of demyelination, we describe the motility and intercellular interactions of transplanted mouse NPCs expressing green fluorescent protein (GFP) with damaged axons expressing yellow fluorescent protein (YFP). Our findings reveal focal axonal degeneration that occurs in the ventral side of the spinal cord within 1 wk following intracranial instillation with the neurotropic JHM strain of mouse hepatitis virus (JHMV). Axonal damage precedes extensive demyelination and is characterized by swelling along the length of the axon, loss of YFP signal, and transected appearance. NPCs engrafted into spinal cords of JHMV-infected mice exhibited diminished migration velocities and increased proliferation compared with transplanted cells in noninfected mice. NPCs preferentially accumulated within areas of axonal damage, initiated direct contact with axons, and subsequently expressed the myelin proteolipid protein gene, initiating remyelination. These findings indicate that NPCs transplanted into an inflammatory demyelinating microenvironment participate directly in therapeutic outcome through the wrapping of myelin around damaged neurons.


Subject(s)
Axons/physiology , Multiple Sclerosis/therapy , Myelin Sheath/physiology , Nerve Regeneration/physiology , Neural Stem Cells/physiology , Stem Cell Transplantation/methods , Animals , Bacterial Proteins/metabolism , Cell Differentiation/physiology , Cell Movement/physiology , Cells, Cultured , Demyelinating Diseases/pathology , Demyelinating Diseases/physiopathology , Demyelinating Diseases/therapy , Disease Models, Animal , Green Fluorescent Proteins/metabolism , Hepatitis, Viral, Animal/complications , Luminescent Proteins/metabolism , Mice , Mice, Inbred C57BL , Multiple Sclerosis/pathology , Multiple Sclerosis/virology , Murine hepatitis virus , Neural Stem Cells/cytology , Neural Stem Cells/metabolism , Spinal Cord/cytology
10.
PLoS Comput Biol ; 11(1): e1003965, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25569772

ABSTRACT

The oscillating concentration of intracellular calcium is one of the most important examples for collective dynamics in cell biology. Localized releases of calcium through clusters of inositol 1,4,5-trisphosphate receptor channels constitute elementary signals called calcium puffs. Coupling by diffusing calcium leads to global releases and waves, but the exact mechanism of inter-cluster coupling and triggering of waves is unknown. To elucidate the relation of puffs and waves, we here model a cluster of IP3R channels using a gating scheme with variable non-equilibrium IP3 binding. Hybrid stochastic and deterministic simulations show that puffs are not stereotyped events of constant duration but are sensitive to stimulation strength and residual calcium. For increasing IP3 concentration, the release events become modulated at a timescale of minutes, with repetitive wave-like releases interspersed with several puffs. This modulation is consistent with experimental observations we present, including refractoriness and increase of puff frequency during the inter-wave interval. Our results suggest that waves are established by a random but time-modulated appearance of sustained release events, which have a high potential to trigger and synchronize activity throughout the cell.


Subject(s)
Calcium/chemistry , Calcium/metabolism , Inositol 1,4,5-Trisphosphate Receptors/chemistry , Inositol 1,4,5-Trisphosphate Receptors/metabolism , Models, Biological , Computational Biology , Computer Simulation
11.
Biophys J ; 108(2): 237-46, 2015 Jan 20.
Article in English | MEDLINE | ID: mdl-25606672

ABSTRACT

Upon endoplasmic reticulum Ca(2+) store depletion, Orai channels in the plasma membrane are activated directly by endoplasmic reticulum-resident STIM proteins to generate the Ca(2+)-selective, Ca(2+) release-activated Ca(2+) (CRAC) current. After the molecular identification of Orai, a plethora of functional and biochemical studies sought to compare Orai homologs, determine their stoichiometry, identify structural domains responsible for the biophysical fingerprint of the CRAC current, identify the physiological functions, and investigate Orai homologs as potential therapeutic targets. Subsequently, the solved crystal structure of Drosophila Orai (dOrai) substantiated many findings from structure-function studies, but also revealed an unexpected hexameric structure. In this review, we explore Orai channels as elucidated by functional and biochemical studies, analyze the dOrai crystal structure and its implications for Orai channel function, and present newly available information from molecular dynamics simulations that shed light on Orai channel gating and permeation.


Subject(s)
Calcium Channels/chemistry , Calcium Signaling , Ion Channel Gating , Amino Acid Sequence , Animals , Calcium Channels/genetics , Calcium Channels/metabolism , Humans , Molecular Sequence Data
12.
J Immunol ; 190(7): 3197-206, 2013 Apr 01.
Article in English | MEDLINE | ID: mdl-23455504

ABSTRACT

In T lymphocytes, Ca(2+) release-activated Ca(2+) (CRAC) channels composed of Orai1 subunits trigger Ag-induced gene expression and cell proliferation through the NFAT pathway. We evaluated the requirement of CRAC channel function for lymphocyte homing using expression of a dominant-negative Orai1-E106A mutant to suppress Ca(2+) signaling. To investigate homing and motility of human lymphocytes in immunocompromised mouse hosts, we transferred human lymphocytes either acutely or after stable engraftment after a second transfer from the same blood donor. Human and mouse lymphocyte homing was assessed, and cells were tracked within lymph nodes (LNs) by two-photon microscopy. Our results demonstrate that human T and B lymphocytes home into and migrate within the LNs of immunocompromised NOD.SCID mice similar to murine lymphocytes. Human T and B cells colocalized in atrophied or reconstituted mouse LNs, where T cells migrated in a random walk at velocities of 9-13 µm/min and B cells at 6 µm/min. Expression of Orai1-E106A inhibited CRAC channel function in human and mouse T cells, and prevented homing from high endothelial venules into murine LNs. Ca(2+) signals induced by CCL21 were also inhibited in T cells expressing Orai1-E106A. With CRAC channels inhibited, the high-affinity form of LFA-1 failed to become active, and T cells failed to migrate across endothelial cells in a transwell model. These results establish a requirement for CRAC channel-mediated Ca(2+) influx for T cell homing to LNs mediated by high-affinity integrin activation and chemokine-induced transendothelial migration.


Subject(s)
Calcium Channels/metabolism , Lymph Nodes/immunology , Lymph Nodes/metabolism , T-Lymphocytes/immunology , T-Lymphocytes/metabolism , Animals , Calcium Channels/genetics , Calcium Signaling , Cell Movement/immunology , Cell Tracking , Chemokine CCL21/metabolism , Humans , Immunocompromised Host , Lymphocyte Function-Associated Antigen-1/metabolism , Mice , Mice, Inbred NOD , Mice, SCID , Mutation , ORAI1 Protein
13.
Proc Natl Acad Sci U S A ; 109(20): E1258-66, 2012 May 15.
Article in English | MEDLINE | ID: mdl-22511718

ABSTRACT

B-cell-induced peripheral T-cell tolerance is characterized by suppression of T-cell proliferation and T-cell-dependent antibody production. However, the cellular interactions that underlie tolerance induction have not been identified. Using two-photon microscopy of lymph nodes we show that tolerogenic LPS-activated membrane-bound ovalbumin (mOVA) B cells (LPS B cells) establish long-lived, highly motile conjugate pairs with responding antigen-specific OTII T cells but not with antigen-irrelevant T cells. Treatment with anti-CTLA-4 disrupts persistent B-cell-T-cell (B-T) contacts and suppresses antigen-specific tolerance. Nontolerogenic CpG-activated mOVA B cells (CpG B cells) also form prolonged, motile conjugates with responding OTII T cells when transferred separately. However, when both tolerogenic and nontolerogenic B-cell populations are present, LPS B cells suppress long-lived CpG B-OTII T-cell interactions and exhibit tolerogenic dominance. Contact of LPS B cells with previously established B-T pairs resulted in partner-swapping events in which LPS B cells preferentially migrate toward and disrupt nontolerogenic CpG mOVA B-cell-OTII T-cell pairs. Our results demonstrate that establishment of peripheral T-cell tolerance involves physical engagement of B cells with the responding T-cell population, acting in a directed and competitive manner to alter the functional outcome of B-T interactions.


Subject(s)
B-Lymphocytes/metabolism , Lymph Nodes/immunology , Peripheral Tolerance/immunology , T-Lymphocytes/immunology , Toll-Like Receptor 4/metabolism , Toll-Like Receptor 9/metabolism , Adoptive Transfer , Animals , Antibodies, Monoclonal/immunology , B-Lymphocytes/immunology , CTLA-4 Antigen/immunology , Flow Cytometry , Mice , Ovalbumin/metabolism , Statistics, Nonparametric , Toll-Like Receptor 4/immunology , Toll-Like Receptor 9/immunology
14.
Nat Rev Immunol ; 2(11): 872-80, 2002 Nov.
Article in English | MEDLINE | ID: mdl-12415310

ABSTRACT

Many lymphocyte functions, such as antigen recognition, take place deep in densely populated lymphoid organs. Because direct in vivo observation was not possible, the dynamics of immune-cell interactions have been inferred or extrapolated from in vitro studies. Two-photon fluorescence excitation uses extremely brief (<1 picosecond) and intense pulses of light to 'see' directly into living tissues, to a greater depth and with less phototoxicity than conventional imaging methods. Two-photon microscopy, in combination with newly developed indicator molecules, promises to extend single-cell approaches to the in vivo setting and to reveal in detail the cellular collaborations that underlie the immune response.


Subject(s)
Diagnostic Imaging/methods , Microscopy, Confocal/methods , T-Lymphocytes/cytology , Animals , Humans , Photons
15.
Biophys J ; 107(4): 834-45, 2014 Aug 19.
Article in English | MEDLINE | ID: mdl-25140418

ABSTRACT

Puffs are local Ca(2+) signals that arise by Ca(2+) liberation from the endoplasmic reticulum through the concerted opening of tightly clustered inositol trisphosphate receptors/channels (IP3Rs). The locations of puff sites observed by Ca(2+) imaging remain static over several minutes, whereas fluorescence recovery after photobleaching (FRAP) experiments employing overexpression of fluorescently tagged IP3Rs have shown that the majority of IP3Rs are freely motile. To address this discrepancy, we applied single-molecule imaging to locate and track type 1 IP3Rs tagged with a photoswitchable fluorescent protein and expressed in COS-7 cells. We found that ∼ 70% of the IP3R1 molecules were freely motile, undergoing random walk motility with an apparent diffusion coefficient of ∼ 0.095 µm s(-1), whereas the remaining molecules were essentially immotile. A fraction of the immotile IP3Rs were organized in clusters, with dimensions (a few hundred nanometers across) comparable to those previously estimated for the IP3R clusters underlying functional puff sites. No short-term (seconds) changes in overall motility or in clustering of immotile IP3Rs were apparent following activation of IP3/Ca(2+) signaling. We conclude that stable clusters of small numbers of immotile IP3Rs may underlie local Ca(2+) release sites, whereas the more numerous motile IP3Rs appear to be functionally silent.


Subject(s)
Inositol 1,4,5-Trisphosphate Receptors/metabolism , Animals , COS Cells , Calcium/metabolism , Chlorocebus aethiops , Diffusion , Endoplasmic Reticulum/metabolism , Inositol 1,4,5-Trisphosphate Receptors/genetics , Inositol Phosphates/metabolism , Luminescent Proteins/genetics , Luminescent Proteins/metabolism , Microscopy, Fluorescence
16.
J Neurosci ; 33(9): 3824-33, 2013 Feb 27.
Article in English | MEDLINE | ID: mdl-23447594

ABSTRACT

Oligomeric forms of ß-amyloid (Aß(42)) peptides associated with Alzheimer's disease (AD) disrupt cellular Ca(2+) regulation by liberating Ca(2+) into the cytosol from both extracellular and intracellular sources. We elucidated the actions of intracellular Aß by imaging Ca(2+) responses to injections of Aß oligomers into Xenopus oocytes. Two types of signal were observed: (1) local, "channel-like" transients dependent on extracellular Ca(2+) influx, which resembled signals from amlyoid pores formed by extracellular application of oligomers; and (2) local transients and global Ca(2+) waves, resembling Ca(2+) puffs and waves mediated by inositol trisphosphate (IP(3)). The latter responses were suppressed by antagonists of the IP(3) receptor (caffeine and heparin), pretreatment with the G(i)(o)-protein inhibitor pertussis toxin, and pretreatment with lithium to deplete membrane inositol lipids. We show that G-protein-mediated stimulation of IP(3) production and consequent liberation of Ca(2+) from the endoplasmic reticulum by intracellular Aß oligomers is cytotoxic, potentially representing a novel pathological mechanism in AD which may be further exacerbated by AD-linked mutations in presenilins to promote opening of IP(3) receptor/channels.


Subject(s)
Amyloid beta-Peptides/chemistry , Calcium/metabolism , Endoplasmic Reticulum/metabolism , Extracellular Fluid/drug effects , Inositol 1,4,5-Trisphosphate/pharmacology , Peptide Fragments/chemistry , Peptides/pharmacology , Animals , Caffeine/pharmacology , Calcium Signaling/drug effects , Cytosol/drug effects , Cytosol/metabolism , Dose-Response Relationship, Drug , Endoplasmic Reticulum/drug effects , Extracellular Fluid/metabolism , Heparin/pharmacology , Humans , Inositol 1,4,5-Trisphosphate/metabolism , Membrane Potentials/drug effects , Microinjections , Oocytes/drug effects , Oocytes/physiology , Oocytes/ultrastructure , Pertussis Toxin/pharmacology , Phosphodiesterase Inhibitors/pharmacology , Xenopus laevis
17.
J Biol Chem ; 288(9): 6140-53, 2013 Mar 01.
Article in English | MEDLINE | ID: mdl-23300080

ABSTRACT

CALHM1 (calcium homeostasis modulator 1) forms a plasma membrane ion channel that mediates neuronal excitability in response to changes in extracellular Ca(2+) concentration. Six human CALHM homologs exist with no homology to other proteins, although CALHM1 is conserved across >20 species. Here we demonstrate that CALHM1 shares functional and quaternary and secondary structural similarities with connexins and evolutionarily distinct innexins and their vertebrate pannexin homologs. A CALHM1 channel is a hexamer, comprised of six monomers, each of which possesses four transmembrane domains, cytoplasmic amino and carboxyl termini, an amino-terminal helix, and conserved extracellular cysteines. The estimated pore diameter of the CALHM1 channel is ∼14 Å, enabling permeation of large charged molecules. Thus, CALHMs, connexins, and pannexins and innexins are structurally related protein families with shared and distinct functional properties.


Subject(s)
Calcium Channels/chemistry , Calcium Channels/metabolism , Connexins/chemistry , Connexins/metabolism , Membrane Glycoproteins/chemistry , Membrane Glycoproteins/metabolism , Animals , Calcium Channels/genetics , Cell Line, Tumor , Connexins/genetics , Humans , Membrane Glycoproteins/genetics , Mice , Protein Structure, Secondary , Protein Structure, Tertiary , Structural Homology, Protein
18.
Nature ; 456(7218): 116-20, 2008 Nov 06.
Article in English | MEDLINE | ID: mdl-18820677

ABSTRACT

Ca(2+)-release-activated Ca(2+) (CRAC) channels underlie sustained Ca(2+) signalling in lymphocytes and numerous other cells after Ca(2+) liberation from the endoplasmic reticulum (ER). RNA interference screening approaches identified two proteins, Stim and Orai, that together form the molecular basis for CRAC channel activity. Stim senses depletion of the ER Ca(2+) store and physically relays this information by translocating from the ER to junctions adjacent to the plasma membrane, and Orai embodies the pore of the plasma membrane calcium channel. A close interaction between Stim and Orai, identified by co-immunoprecipitation and by Förster resonance energy transfer, is involved in the opening of the Ca(2+) channel formed by Orai subunits. Most ion channels are multimers of pore-forming subunits surrounding a central channel, which are preassembled in the ER and transported in their final stoichiometry to the plasma membrane. Here we show, by biochemical analysis after cross-linking in cell lysates and intact cells and by using non-denaturing gel electrophoresis without cross-linking, that Orai is predominantly a dimer in the plasma membrane under resting conditions. Moreover, single-molecule imaging of green fluorescent protein (GFP)-tagged Orai expressed in Xenopus oocytes showed predominantly two-step photobleaching, again consistent with a dimeric basal state. In contrast, co-expression of GFP-tagged Orai with the carboxy terminus of Stim as a cytosolic protein to activate the Orai channel without inducing Ca(2+) store depletion or clustering of Orai into punctae yielded mostly four-step photobleaching, consistent with a tetrameric stoichiometry of the active Orai channel. Interaction with the C terminus of Stim thus induces Orai dimers to dimerize, forming tetramers that constitute the Ca(2+)-selective pore. This represents a new mechanism in which assembly and activation of the functional ion channel are mediated by the same triggering molecule.


Subject(s)
Calcium Channels/chemistry , Calcium Channels/metabolism , Drosophila Proteins/chemistry , Drosophila Proteins/metabolism , Drosophila melanogaster/chemistry , Drosophila melanogaster/metabolism , Membrane Proteins/chemistry , Membrane Proteins/metabolism , Xenopus Proteins/chemistry , Xenopus Proteins/metabolism , Animals , Calcium Channels/genetics , Cell Line , Cross-Linking Reagents , Drosophila Proteins/genetics , Humans , Membrane Proteins/genetics , ORAI1 Protein , Oocytes/metabolism , Photobleaching , Protein Multimerization , Protein Structure, Quaternary , Stromal Interaction Molecule 1 , Xenopus , Xenopus Proteins/genetics
19.
Biochem J ; 449(1): 167-73, 2013 Jan 01.
Article in English | MEDLINE | ID: mdl-23035871

ABSTRACT

InsP3-mediated puffs are fundamental building blocks of cellular Ca2+ signalling, and arise through the concerted opening of clustered InsP3Rs (InsP3 receptors) co-ordinated via Ca2+-induced Ca2+ release. Although the Ca2+ dependency of InsP3Rs has been extensively studied at the single channel level, little is known as to how changes in basal cytosolic [Ca2+] would alter the dynamics of InsP3-evoked Ca2+ signals in intact cells. To explore this question, we expressed Ca2+-permeable channels (nicotinic acetylcholine receptors) in the plasma membrane of voltage-clamped Xenopus oocytes to regulate cytosolic [Ca2+] by changing the electrochemical gradient for extracellular Ca2+ entry, and imaged Ca2+ liberation evoked by photolysis of caged InsP3. Elevation of basal cytosolic [Ca2+] strongly increased the amplitude and shortened the latency of global Ca2+ waves. In oocytes loaded with EGTA to localize Ca2+ signals, the number of sites at which puffs were observed and the frequency and latency of puffs were strongly dependent on cytosolic [Ca2+], whereas puff amplitudes were only weakly affected. The results of the present study indicate that basal cytosolic [Ca2+] strongly affects the triggering of puffs, but has less of an effect on puffs once they have been initiated.


Subject(s)
Calcium Signaling/physiology , Calcium/physiology , Cytosol/physiology , Inositol 1,4,5-Trisphosphate Receptors/physiology , Animals , Cell Membrane/physiology , Female , Photolysis , Xenopus laevis
20.
Proc Natl Acad Sci U S A ; 108(43): 17832-7, 2011 Oct 25.
Article in English | MEDLINE | ID: mdl-21987805

ABSTRACT

We applied single-molecule photobleaching to investigate the stoichiometry of human Orai1 and Orai3 channels tagged with eGFP and expressed in mammalian cells. Orai1 was detected predominantly as dimers under resting conditions and as tetramers when coexpressed with C-STIM1 to activate Ca(2+) influx. Orai1 was also found to be tetrameric when coexpressed with STIM1 and evaluated following fixation. We show that fixation rapidly causes release of Ca(2+), redistribution of STIM1 to the plasma membrane, and STIM1/Orai1 puncta formation, and may cause the channel to be in the activated state. Consistent with this possibility, Orai1 was found predominantly as a dimer when coexpressed with STIM1 in living cells under resting conditions. We further show that Orai3, like Orai1, is dimeric under resting conditions and is predominantly tetrameric when activated by C-STIM1. Interestingly, a dimeric Orai3 stoichiometry was found both before and during application of 2-aminoethyldiphenyl borate (2-APB) to activate a nonselective cation conductance in its STIM1-independent mode. We conclude that the human Orai1 and Orai3 channels undergo a dimer-to-tetramer transition to form a Ca(2+)-selective pore during store-operated activation and that Orai3 forms a dimeric nonselective cation pore upon activation by 2-APB.


Subject(s)
Calcium Channels/chemistry , Calcium Signaling/physiology , Protein Subunits/chemistry , Blotting, Western , Boron Compounds , Cell Line , Fluorescent Dyes , Fura-2 , Green Fluorescent Proteins , Humans , ORAI1 Protein , Patch-Clamp Techniques , Photobleaching , Polymers
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