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1.
J Gen Virol ; 98(6): 1245-1258, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28635590

ABSTRACT

In order to gain further insight into the early virus-host interactions associated with highly pathogenic avian influenza virus infections in chickens, genome-wide expression profiling of chicken lung and brain was carried out at 24 and 72 h post-inoculation (h p.i.). For this purpose two recombinant H5N3 viruses were utilized, each possessing a polybasic HA0 cleavage site but differing in pathogenicity. The original rH5N3 P0 virus, which has a low-pathogenic phenotype, was passaged six times through chickens to give rise to the derivative rH5N3 P6 virus, which is highly pathogenic (Diederich S, Berhane Y, Embury-Hyatt C, Hisanaga T, Handel K et al.J Virol 2015;89:10724-10734). The gene-expression profiles in lung were similar for both viruses, although they varied in magnitude. While both viruses produced systemic infections, differences in clinical disease progression and viral tissue loads, particularly in brain, where loads of rH5N3 P6 were three orders of magnitude higher than rH5N3 P0 at 72 .p.i., were observed. Although genes associated with gene ontology (GO) categories INFα and INFß biosynthesis, regulation of innate immune response, response to exogenous dsRNA, defence response to virus, positive regulation of NF-κB import into the nucleus and positive regulation of immune response were up-regulated in rH5N3 P0 and rH5N3 P6 brains, fold changes were higher for rH5N3 P6. The additional up-regulation of genes associated with cytokine production, inflammasome and leukocyte activation, and cell-cell adhesion detected in rH5N3 P6 versus rH5N3 P0 brains, suggested that the balance between antiviral and pro-inflammatory innate immune responses leading to acute CNS inflammation might explain the observed differences in pathogenicity.


Subject(s)
Host-Pathogen Interactions , Immunity, Innate , Influenza A virus/immunology , Influenza A virus/pathogenicity , Influenza in Birds/immunology , Influenza in Birds/pathology , Animal Structures/pathology , Animal Structures/virology , Animals , Brain/virology , Chickens , Gene Expression Profiling , Lung/pathology , Viral Load
2.
J Virol ; 89(21): 10724-34, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26246579

ABSTRACT

UNLABELLED: Although a polybasic HA0 cleavage site is considered the dominant virulence determinant for highly pathogenic avian influenza (HPAI) H5 and H7 viruses, naturally occurring virus isolates possessing a polybasic HA0 cleavage site have been identified that are low pathogenic in chickens. In this study, we generated a reassortant H5N3 virus that possessed the hemagglutinin (HA) gene from H5N1 HPAI A/swan/Germany/R65/2006 and the remaining gene segments from low pathogenic A/chicken/British Columbia/CN0006/2004 (H7N3). Despite possessing the HA0 cleavage site GERRRKKR/GLF, this rH5N3 virus exhibited a low pathogenic phenotype in chickens. Although rH5N3-inoculated birds replicated and shed virus and seroconverted, transmission to naive contacts did not occur. To determine whether this virus could evolve into a HPAI form, it underwent six serial passages in chickens. A progressive increase in virulence was observed with the virus from passage number six being highly transmissible. Whole-genome sequencing demonstrated the fixation of 12 nonsynonymous mutations involving all eight gene segments during passaging. One of these involved the catalytic site of the neuraminidase (NA; R293K) and is associated with decreased neuraminidase activity and resistance to oseltamivir. Although introducing the R293K mutation into the original low-pathogenicity rH5N3 increased its virulence, transmission to naive contact birds was inefficient, suggesting that one or more of the remaining changes that had accumulated in the passage number six virus also play an important role in transmissibility. Our findings show that the functional linkage and balance between HA and NA proteins contributes to expression of the HPAI phenotype. IMPORTANCE: To date, the contribution that hemagglutinin-neuraminidase balance can have on the expression of a highly pathogenic avian influenza virus phenotype has not been thoroughly examined. Reassortment, which can result in new hemagglutinin-neuraminidase combinations, may have unpredictable effects on virulence and transmission characteristics of a virus. Our data show the importance of the neuraminidase in complementing a polybasic HA0 cleavage site. Furthermore, it demonstrates that adaptive changes selected for during the course of virus evolution can result in unexpected traits such as antiviral drug resistance.


Subject(s)
Chickens , Hemagglutinin Glycoproteins, Influenza Virus/metabolism , Influenza A virus/metabolism , Influenza A virus/pathogenicity , Influenza in Birds/virology , Neuraminidase/metabolism , Reassortant Viruses/genetics , Animals , Base Sequence , Dogs , Genome, Viral/genetics , Hemagglutinin Glycoproteins, Influenza Virus/genetics , Influenza A Virus, H5N1 Subtype/genetics , Influenza A Virus, H7N3 Subtype/genetics , Madin Darby Canine Kidney Cells , Molecular Sequence Data , Mutation/genetics , Neuraminidase/genetics , Oseltamivir , Sequence Analysis, DNA , Viral Plaque Assay , Virulence
3.
J Gen Virol ; 96(Pt 1): 30-39, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25234642

ABSTRACT

A common critical cellular event that many human enveloped viruses share is the requirement for proteolytic cleavage of the viral glycoprotein by furin in the host secretory pathway. For example, the furin-dependent proteolytic activation of highly pathogenic (HP) influenza A (infA) H5 and H7 haemagglutinin precursor (HA0) subtypes is critical for yielding fusion-competent infectious virions. In this study, we hypothesized that viral hijacking of the furin pathway by HP infA viruses to permit cleavage of HA0 could represent a novel molecular mechanism controlling the dynamic production of fusion-competent infectious virus particles during the viral life cycle. We explored the biological role of a newly identified furin-directed human microRNA, miR-24, in this process as a potential post-transcriptional regulator of the furin-mediated activation of HA0 and production of fusion-competent virions in the host secretory pathway. We report that miR-24 and furin are differentially expressed in human A549 cells infected with HP avian-origin infA H5N1. Using miR-24 mimics, we demonstrated a robust decrease in both furin mRNA levels and intracellular furin activity in A549 cells. Importantly, pretreatment of A549 cells with miR-24 mimicked these results: a robust decrease of H5N1 infectious virions and a complete block of H5N1 virus spread that was not observed in A549 cells infected with low-pathogenicity swine-origin infA H1N1 virus. Our results suggest that viral-specific downregulation of furin-directed microRNAs such as miR-24 during the life cycle of HP infA viruses may represent a novel regulatory mechanism that governs furin-mediated proteolytic activation of HA0 glycoproteins and production of infectious virions.


Subject(s)
Furin/genetics , Influenza A Virus, H5N1 Subtype/genetics , Influenza, Human/virology , MicroRNAs/genetics , Secretory Pathway/genetics , Animals , Birds/virology , Cell Line , Communicable Diseases/virology , Dogs , Hemagglutinin Glycoproteins, Influenza Virus/genetics , Host-Pathogen Interactions/genetics , Humans , Influenza A Virus, H1N1 Subtype/genetics , Influenza in Birds/virology , Madin Darby Canine Kidney Cells , RNA Processing, Post-Transcriptional/genetics , RNA, Messenger/genetics
4.
Can Vet J ; 56(2): 149-52, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25694663

ABSTRACT

In January, 2014, increased mortality was reported in piglets with acute diarrhea on an Ontario farm. Villus atrophy in affected piglets was confined to the small intestine. Samples of colon content were PCR-positive for porcine epidemic diarrhea virus (PEDV). Other laboratory tests did not detect significant pathogens, confirming this was the first case of PED in Canada.


Premier cas de diarrhée épidémique porcine au Canada. En janvier 2014, une mortalité accrue a été signalée chez des porcelets atteints de diarrhée aiguë dans une ferme de l'Ontario. L'atrophie des villosités chez les porcelets touchés a été confinée au petit intestin. Des échantillons du contenu du côlon étaient positifs par RCP pour le virus de la diarrhée épidémique porcine (VDEP). D'autres tests de laboratoire n'ont pas détecté d'agents pathogènes importants, ce qui confirme qu'il s'agit du premier cas de DEP au Canada.(Traduit par Isabelle Vallières).


Subject(s)
Coronavirus Infections/veterinary , Diarrhea/veterinary , Porcine epidemic diarrhea virus , Animals , Canada/epidemiology , Coronavirus Infections/epidemiology , Coronavirus Infections/pathology , Diarrhea/epidemiology , Diarrhea/virology , Gastrointestinal Tract/pathology , Gastrointestinal Tract/virology , Swine
5.
J Virol ; 86(11): 6109-22, 2012 Jun.
Article in English | MEDLINE | ID: mdl-22438559

ABSTRACT

MicroRNAs (miRNAs) repress the expression levels of genes by binding to mRNA transcripts, acting as master regulators of cellular processes. Differential expression of miRNAs has been linked to virus-associated diseases involving members of the Hepacivirus, Herpesvirus, and Retrovirus families. In contrast, limited biological and molecular information has been reported on the potential role of cellular miRNAs in the life cycle of influenza A viruses (infA). In this study, we hypothesize that elucidating the miRNA expression signatures induced by low-pathogenicity swine-origin infA (S-OIV) pandemic H1N1 (2009) and highly pathogenic avian-origin infA (A-OIV) H7N7 (2003) infections could reveal temporal and strain-specific miRNA fingerprints during the viral life cycle, shedding important insights into the potential role of cellular miRNAs in host-infA interactions. Using a microfluidic microarray platform, we profiled cellular miRNA expression in human A549 cells infected with S- and A-OIVs at multiple time points during the viral life cycle, including global gene expression profiling during S-OIV infection. Using target prediction and pathway enrichment analyses, we identified the key cellular pathways associated with the differentially expressed miRNAs and predicted mRNA targets during infA infection, including the immune system, cell proliferation, apoptosis, cell cycle, and DNA replication and repair. By identifying the specific and dynamic molecular phenotypic changes (microRNAome) triggered by S- and A-OIV infection in human cells, we provide experimental evidence demonstrating a series of temporal and strain-specific host molecular responses involving different combinatorial contributions of multiple cellular miRNAs. Our results also identify novel potential exosomal miRNA biomarkers associated with pandemic S-OIV and deadly A-OIV-host infection.


Subject(s)
Epithelial Cells/immunology , Epithelial Cells/virology , Gene Expression Profiling , Host-Pathogen Interactions , Influenza A Virus, H1N1 Subtype/immunology , Influenza A Virus, H7N7 Subtype/immunology , MicroRNAs/biosynthesis , Cell Line , Humans , Influenza A Virus, H1N1 Subtype/pathogenicity , Influenza A Virus, H7N7 Subtype/pathogenicity , MicroRNAs/genetics , Microarray Analysis , Microfluidics/methods
6.
J Virol ; 85(17): 8667-79, 2011 Sep.
Article in English | MEDLINE | ID: mdl-21697484

ABSTRACT

The 2009 pandemic H1N1 (pH1N1), of apparent swine origin, may have evolved in pigs unnoticed because of insufficient surveillance. Consequently, the need for surveillance of influenza viruses circulating in pigs has received added attention. In this study we characterized H1N1 viruses isolated from Canadian pigs in 2009. Isolates from May 2009 were comprised of hemagglutinin and neuraminidase (NA) genes of classical SIV origin in combination with the North American triple-reassortant internal gene (TRIG) cassette, here termed contemporary SIV (conSIV) H1N1. These conSIV H1N1 viruses were contiguous with the North American αH1 cluster, which was distinct from the pH1N1 isolates that were antigenically more related to the γH1 cluster. After the initial isolation of pH1N1 from an Alberta pig farm in early May 2009, pH1N1 was found several times in Canadian pigs. These pH1N1 isolates were genetically and antigenically homogeneous. In addition, H1N1 viruses bearing seasonal human H1 and N1 genes together with the TRIG cassette and an NA encoding an oseltamivir-resistance marker were isolated from pigs. The NS gene of one of these seasonal human-like SIV (shSIV) H1N1 isolates was homologous to pH1N1 NS, implicating reassortment between the two strains. Antigenic cross-reactivity was observed between pH1N1 and conSIV but not with shSIV H1N1. In summary, although there was cocirculation of pH1N1 with conSIV and shSIV H1N1 in Canadian pigs after May 2009, there was no evidence supporting the presence of pH1N1 in pigs prior to May 2009. The possibility for further reassortants being generated exists and should be closely monitored.


Subject(s)
Hemagglutinin Glycoproteins, Influenza Virus/genetics , Influenza A Virus, H1N1 Subtype/classification , Influenza A Virus, H1N1 Subtype/genetics , Neuraminidase/genetics , Paramyxoviridae Infections/veterinary , Swine Diseases/virology , Viral Proteins/genetics , Animals , Antigens, Viral/immunology , Canada , Cluster Analysis , Cross Reactions , Genotype , Humans , Influenza A Virus, H1N1 Subtype/isolation & purification , Molecular Sequence Data , Paramyxoviridae Infections/virology , Phylogeny , RNA, Viral/genetics , Sequence Analysis, DNA , Sequence Homology, Amino Acid , Swine
7.
Avian Dis ; 56(4 Suppl): 845-8, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23402102

ABSTRACT

All reports of avian influenza virus infections in poultry and isolations from wild bird species in Canada, the United States, and Mexico between 2009 and 2011 involved low pathogenic avian influenza. All three countries reported outbreaks of low pathogenic notifiable avian influenza in poultry during this period. The reports involved outbreaks of H5N2 among commercial turkeys in Canada in 2009 and 2010; outbreaks of H5N3 in turkeys in 2009, H5N2 in chickens in 2010, H7N3 in turkeys in 2011, and H7N9 in chickens, turkeys, geese, and guinea fowl in 2011 in the United States; and multiple outbreaks of H5N2 in chickens in Mexico in 2009, 2010, and 2011. Outbreaks of pandemic H1N1 infections in turkey breeder flocks were reported in Canada in 2009 and in the United States in 2010. Active surveillance of live bird markets in the United States led to the detection of H2, H3, H4, H5, H6, and H10 subtypes. Despite the fact that wild bird surveillance programs underwent contraction during this period in both Canada and the United States, H5 and H7 subtypes were still detected.


Subject(s)
Influenza in Birds/epidemiology , Animals , Animals, Wild , Birds , Influenza A virus/classification , Influenza A virus/isolation & purification , Influenza A virus/pathogenicity , Influenza in Birds/virology , North America/epidemiology , Population Surveillance , Time Factors
8.
Can Vet J ; 53(9): 998-1002, 2012 Sep.
Article in English | MEDLINE | ID: mdl-23450867

ABSTRACT

In March 2011, rabbit hemorrhagic disease (RHD) was suspected in a 1-year-old male neutered lop-eared rabbit that had acute onset liver failure. Gross pathology, histopathology, immunohistochemistry, partial nucleic acid sequencing and phylogenetic analysis of the major capsid protein (VP60) and animal inoculation studies all supported this diagnosis making it the first confirmed case of RHD in Canada.In March 2011, rabbit hemorrhagic disease (RHD) was suspected in a 1-year-old male neutered lop-eared rabbit that had acute onset liver failure. Gross pathology, histopathology, immunohistochemistry, partial nucleic acid sequencing and phylogenetic analysis of the major capsid protein (VP60) and animal inoculation studies all supported this diagnosis making it the first confirmed case of RHD in Canada.


RésuméLe premier cas signalé de maladie hémorragique du lapin au Canada. En mars 2011, la maladie hémorragique du lapin (MHL) a été suspectée chez un lapin bélier mâle castré âgé de 1 an qui a présenté l'apparition soudaine d'une insuffisance hépatique. La pathologie macroscopique, l'histopathologie, l'immunohistochimie, le séquençage partiel de l'acide nucléique et l'analyse phylogénétique de la principale protéine de la capside (VP60) et des études d'inoculation animale ont confirmé d'emblée ce diagnostic, ce qui en fait le premier cas confirmé de MHL au Canada.(Traduit par Isabelle Vallières).


Subject(s)
Caliciviridae Infections/veterinary , Hemorrhagic Disease Virus, Rabbit/isolation & purification , Animals , Base Sequence , Caliciviridae Infections/diagnosis , Caliciviridae Infections/epidemiology , Caliciviridae Infections/virology , Canada/epidemiology , Capsid Proteins/genetics , Capsid Proteins/metabolism , Diagnosis, Differential , Fatal Outcome , Hemorrhagic Disease Virus, Rabbit/genetics , Male , Rabbits
9.
J Virol ; 84(5): 2245-56, 2010 Mar.
Article in English | MEDLINE | ID: mdl-20015998

ABSTRACT

Since its initial identification in Mexico and the United States, concerns have been raised that the novel H1N1 influenza virus might cause a pandemic of severity comparable to that of the 1918 pandemic. In late April 2009, viruses phylogenetically related to pandemic H1N1 influenza virus were isolated from an outbreak on a Canadian pig farm. This outbreak also had epidemiological links to a suspected human case. Experimental infections carried out in pigs using one of the swine isolates from this outbreak and the human isolate A/Mexico/InDRE4487/2009 showed differences in virus recovery from the lower respiratory tract. Virus was consistently isolated from the lungs of pigs infected with A/Mexico/InDRE4487/2009, while only one pig infected with A/swine/Alberta/OTH-33-8/2008 yielded live virus from the lung, despite comparable amounts of viral RNA and antigen in both groups of pigs. Clinical disease resembled other influenza virus infections in swine, albeit with somewhat prolonged virus antigen detection and delayed viral-RNA clearance from the lungs. There was also a noteworthy amount of genotypic variability among the viruses isolated from the pigs on the farm. This, along with the somewhat irregular pathobiological characteristics observed in experimentally infected animals, suggests that although the virus may be of swine origin, significant viral evolution may still be ongoing.


Subject(s)
Disease Outbreaks , Influenza A Virus, H1N1 Subtype/genetics , Influenza A Virus, H1N1 Subtype/immunology , Influenza, Human , Orthomyxoviridae Infections , Swine Diseases , Animals , Canada/epidemiology , Humans , Influenza A Virus, H1N1 Subtype/classification , Influenza, Human/epidemiology , Influenza, Human/immunology , Influenza, Human/virology , Lung/cytology , Lung/pathology , Lung/virology , Orthomyxoviridae Infections/epidemiology , Orthomyxoviridae Infections/immunology , Orthomyxoviridae Infections/virology , Phylogeny , RNA, Viral/isolation & purification , Swine , Swine Diseases/epidemiology , Swine Diseases/immunology , Swine Diseases/virology , Zoonoses/epidemiology , Zoonoses/virology
10.
J Gen Virol ; 91(Pt 12): 2928-40, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20810747

ABSTRACT

The structural glycoprotein E(rns) (an envelope protein with RNase activity) of classical swine fever virus (CSFV) is not well characterized with respect to its antigenic structure and organization. Here, we investigated the antigenic sites on E(rns) by raising mAbs against the Escherichia coli expressed E(rns) of CSFV strain Alfort/187 and defined the B-cell epitopes recognized by these antibodies. Eighteen mAbs to E(rns) were identified and they were classified as either immunoglobulin subclass G1 or G2b. Using an array of overlapping 12-mer peptides, spanning aa 27-227 of E(rns), the epitopes for 12 mAbs were mapped to a high resolution of six to eight residues, which cluster in five discrete locations, ¹³GIWPEKIC³8 (group I), 65NYTCCKLQ7² (group II), ¹²7QARNRPTT¹³4 (group III), ¹45SFAGTVIE¹5² (group IV) and ¹6¹VEDILY¹66 (group V). Two mAbs recognize two or more antigenic determinants, including the group II epitope. The epitopes for four other mAbs could not be mapped using the overlapping 12-mer peptides. Random peptide phage display with one mAb from each of all the groups except group V further identified some conserved residues that may be critical for binding antibodies, i.e. Trp³³ in the epitope of group I, Leu7¹ in the epitope of group II, Gln¹²7 and Apn¹³° in the epitope of group III, and Ser¹45 and Gly¹48 in the epitope of group IV. This study has provided new insights into the structure and organization of epitopes on the CSFV E(rns) and valuable epitope information for the rational design of vaccines, drugs and diagnostic immunoassays for CSFV.


Subject(s)
Antibodies, Monoclonal/immunology , Antibodies, Viral/immunology , Classical Swine Fever Virus/immunology , Epitope Mapping/methods , Epitopes, B-Lymphocyte/immunology , Ribonucleases/immunology , Viral Structural Proteins/immunology , Animals , Antibodies, Monoclonal/isolation & purification , Antibodies, Viral/isolation & purification , Conserved Sequence , Female , Immunoglobulin G/immunology , Immunoglobulin G/isolation & purification , Mice , Mice, Inbred BALB C , Peptide Library , Protein Array Analysis
11.
J Gen Virol ; 91(Pt 2): 339-42, 2010 Feb.
Article in English | MEDLINE | ID: mdl-19889930

ABSTRACT

The susceptibility of chickens to both 1918 and 2009 H1N1 influenza virus was evaluated. The intravenous pathogenicity index of 1918 and 2009 H1N1 viruses in chickens was 0. Chickens did not develop clinical signs following experimental inoculation simulating natural infection. No gross pathological changes were observed in any tissues of chickens between 2 and 18 days post-infection (p.i.) and viral RNA was not detected by real-time RT-PCR in mucosal secretions or tissues. Seroconversion was not detected in any of the chickens following inoculation with H1N1 2009 virus, whereas half the chickens developed influenza-specific antibodies at 28 days p.i. with 1918 influenza, suggesting limited infection. Viral RNA was detected by real-time RT-PCR in mallard ducks following inoculation with 1918 influenza virus at 3 days p.i. in cloacal swabs, but not in tissues, and all ducks seroconverted by 28 days p.i. Both 1918 and 2009 H1N1 influenza viruses behave as LPAI in gallinaceous poultry.


Subject(s)
Influenza A Virus, H1N1 Subtype/pathogenicity , Influenza in Birds/virology , Animals , Chickens , Ducks , Influenza A Virus, H1N1 Subtype/immunology , Influenza A Virus, H1N1 Subtype/isolation & purification , Influenza in Birds/immunology , Influenza in Birds/pathology
12.
J Clin Microbiol ; 48(7): 2440-8, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20107098

ABSTRACT

A morbidity-mortality event involving virulent Newcastle disease virus (NDV) in wild double-crested cormorants (Phalacrocorax auritus) occurred in North America in the summer of 2008. All 22 viruses isolated from cormorants were positively identified by the USDA-validated real-time reverse transcription-PCR assay targeting the matrix gene. However, the USDA-validated reverse transcription-PCR assay targeting the fusion gene that is specific for virulent isolates identified only 1 of these 22 isolates. Additionally, several of these isolates have been sequenced, and this information was used to identify genomic changes that caused the failure of the test and to revisit the evolution of NDV in cormorants. The forward primer and fusion probe were redesigned from the 2008 cormorant isolate sequence, and the revised fusion gene test successfully identified all 22 isolates. Phylogenetic analyses using both the full fusion sequence and the partial 374-nucleotide sequence identified these isolates as genotype V, with their nearest ancestor being an earlier isolate collected from Nevada in 2005. Histopathological analysis of this ancestral strain revealed morphological changes in the brain consistent with that of the traditional mesogenic pathotypes in cormorants. Intracerebral pathogenicity assays indicated that each of these isolates is virulent with values of >0.7 but not more virulent than earlier isolates reported from Canada.


Subject(s)
Birds/virology , Newcastle Disease , Newcastle disease virus , Animals , Base Sequence , Cerebellum/pathology , Cerebellum/virology , Chickens , Disease Outbreaks/veterinary , Evolution, Molecular , Genes, Viral , Histocytochemistry , Molecular Sequence Data , Newcastle Disease/diagnosis , Newcastle Disease/virology , Newcastle disease virus/genetics , Newcastle disease virus/pathogenicity , Phylogeny , Reverse Transcriptase Polymerase Chain Reaction , Sequence Alignment , Severity of Illness Index , Spleen , Tissue Distribution , Viral Fusion Proteins/genetics
13.
Avian Dis ; 54(4): 1275-85, 2010 Dec.
Article in English | MEDLINE | ID: mdl-21313850

ABSTRACT

Suspected human-to-animal transmission of the 2009 pandemic H1N1 (pH1N1) virus has been reported in several animal species, including pigs, dogs, cats, ferrets, and turkeys. In this study we describe the genetic characterization of pH1N1 viruses isolated from breeder turkeys that was associated with a progressive drop in egg production. Sequence analysis of all eight gene segments from three viruses isolated from this outbreak demonstrated homology with other human and swine pH1N1 isolates. The susceptibility of turkeys to a human pH1N1 isolate was further evaluated experimentally. The 50% turkey infectious dose (TID50) for the human isolate A/Mexico/LnDRE/4487/2009 was determined by inoculating groups of 8-10-week-old turkeys with serial 10-fold dilutions of virus by oronasal and cloacal routes. We estimated the TID50 to be between 1 x 10(5) and 1 x 10(6) TCID50. The pathogenesis of pH1N1 in oronasally or cloacally inoculated juvenile turkeys was also examined. None of the turkeys exhibited clinical signs, and no significant difference in virus shedding or seroconversion was observed between the two inoculation groups. More than 50% of the turkeys in both oronasal and cloacal groups shed virus beginning at 2 days postinoculation (dpi). All birds that actively shed virus seroconverted by 14 dpi. Virus antigen was demonstrated by immunohistochemistry in the cecal tonsils and bursa of Fabricius in two of the birds that were infected by the cloacal route. Virus transmission to naive contact turkeys was at best doubtful. This report provides additional evidence that pH1N1 can cross the species barrier and cause disease outbreaks in domestic turkeys. However, it appears that the reproductive status of the host as well as environmental factors such as concurrent infections, stress, the presence or absence of litter, and stocking density may also contribute to efficient infection and transmission of this agent.


Subject(s)
Influenza A Virus, H1N1 Subtype/isolation & purification , Influenza A Virus, H1N1 Subtype/pathogenicity , Influenza in Birds/virology , Turkeys , Animals , Enzyme-Linked Immunosorbent Assay/veterinary , Humans , Influenza A Virus, H1N1 Subtype/classification , Influenza A Virus, H1N1 Subtype/genetics , Phylogeny
14.
Emerg Infect Dis ; 15(9): 1492-5, 2009 Sep.
Article in English | MEDLINE | ID: mdl-19788823

ABSTRACT

Epidemiologic, serologic, and molecular phylogenetic methods were used to investigate an outbreak of highly pathogenic avian influenza on a broiler breeding farm in Saskatchewan, Canada. Results, coupled with data from influenza A virus surveillance of migratory waterfowl in Canada, implicated wild birds as the most probable source of the low pathogenicity precursor virus.


Subject(s)
Disease Outbreaks , Influenza A virus/pathogenicity , Influenza in Birds , Poultry Diseases , Poultry/virology , Animal Migration , Animals , Animals, Wild/virology , Birds/virology , Disease Outbreaks/veterinary , Influenza A virus/classification , Influenza A virus/genetics , Influenza A virus/isolation & purification , Influenza in Birds/epidemiology , Influenza in Birds/virology , Phylogeny , Poultry Diseases/epidemiology , Poultry Diseases/virology , Saskatchewan/epidemiology
15.
Can Vet J ; 50(11): 1153-61, 2009 Nov.
Article in English | MEDLINE | ID: mdl-20119537

ABSTRACT

On May 2, 2009 the Canadian Food Inspection Agency notified the World Organization for Animal Health that an emerging novel influenza A virus (pandemic H1N1 2009) had been confirmed on a swine farm in Alberta. Over a 4-week period pigs in this farrow-to-finish operation were clinically affected by respiratory disease consistent with an influenza A virus infection and the presence of active viral infection was confirmed in all production areas by real-time polymerase chain reaction (RT-PCR). Despite clinical recovery of animals, there was reluctance by purchasers to receive animals from this operation due to concerns about the effect on both domestic and international markets. The owner decided to depopulate the entire herd due to impending welfare issues associated with overcrowding and economic concerns resulting from the inability to market these animals. Carcasses were rendered or composted and did not enter the human food or animal feed chain. The source of virus in this herd was determined to be an infected human. Zoonotic transmission to 2 individuals responding to the outbreak was suspected and recommendations to prevent occupational exposure are discussed.


Subject(s)
Disease Outbreaks/veterinary , Influenza A Virus, H1N1 Subtype , Influenza, Human/epidemiology , Orthomyxoviridae Infections/veterinary , Swine Diseases/epidemiology , Alberta/epidemiology , Animals , Euthanasia, Animal , Humans , Influenza, Human/transmission , Influenza, Human/virology , Orthomyxoviridae Infections/epidemiology , Orthomyxoviridae Infections/transmission , Orthomyxoviridae Infections/virology , Swine , Swine Diseases/transmission , Swine Diseases/virology , Zoonoses
16.
Avian Dis ; 51(1 Suppl): 309-12, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17494572

ABSTRACT

In February 2004 a highly pathogenic avian influenza outbreak erupted in the Fraser Valley of British Columbia, Canada. The index farm was a chicken broiler breeder operation comprising two flocks, 24 and 52 wk of age. Birds in the older flock presented with a mild drop in egg production and a small increase in mortality. Pathological specimens taken from the older flock were submitted to the provincial veterinary diagnostic laboratory from which an influenza A virus was isolated. While still under investigation by the provincial veterinary authorities, a spike in mortality was observed in birds belonging to the younger flock. Diagnostic material from both flocks was forwarded to the Canadian Food Inspection Agency's National Centre for Foreign Animal Disease. A low-pathogenicity H7N3 virus was detected in the older flock and a novel highly pathogenic H7N3 virus was found in specimens collected from the younger flock. Despite destruction and disposal of birds on the index farm, the virus spread to adjacent farms. Given the high density of poultry operations in the Fraser Valley and the high level of integration amongst industry support services, a total of approximately 17 million chickens, turkeys, ducks, geese, and speciality birds were put at immediate risk. Despite movement controls the virus spread and established itself in three distinct clusters. To prevent further spread, healthy, marketable birds outside of the surveillance areas were pre-emptively slaughtered. Although highly pathogenic avian influenza is a federal responsibility, the successful control and eradication of this outbreak would not have been possible without the cooperative involvement of federal and provincial diagnostic laboratories. The success of this collaboration was partly responsible for the formation of a national avian influenza laboratory network.


Subject(s)
Disease Outbreaks/veterinary , Influenza A virus/pathogenicity , Influenza in Birds/virology , Laboratories/organization & administration , Animals , Birds/virology , British Columbia/epidemiology , Disease Outbreaks/prevention & control
17.
Avian Dis ; 51(1 Suppl): 429-31, 2007 Mar.
Article in English | MEDLINE | ID: mdl-17494600

ABSTRACT

In the summer of 2005 a Canadian national surveillance program for influenza A viruses in wild aquatic birds was initiated. The program involved collaboration between federal and provincial levels of government and was coordinated by the Canadian Cooperative Wildlife Health Centre. The surveillance plan targeted young-of-the-year Mallards along with other duck species at six sampling locations along the major migratory flyways across Canada. Beginning in early August, cloacal swabs were taken from 704 ducks on two lakes adjacent to one another near Kamloops, British Columbia. The swabs were screened for the presence of influenza A RNA using a real-time reverse transcription-polymerase chain reaction (RRT-PCR) assay that targets the M1 gene. Swab samples that gave positive results underwent further testing using H5- and H7-specific RRT-PCR assays. One hundred and seventy-four cloacal swab specimens gave positive or suspicious results for the presence of an H5 virus. A portion of these (28/35) were confirmed using an H5-specific conventional reverse transcription-polymerase chain reaction assay and an H5 virus was eventually isolated from 24/127 swab specimens. Neuraminidase typing revealed the presence of H5N2 and H5N9 viruses. In mid-November of 2005 an H5N2 virus was detected in a commercial duck operation in the lower mainland of British Columbia, approximately 120 km from where the H5N2-positive wild ducks were sampled. Molecular genetic analysis of the H5N2 viruses isolated from wild and domestic ducks was carried out to determine their kinship.


Subject(s)
Ducks/virology , Influenza A Virus, H5N2 Subtype/isolation & purification , Influenza in Birds/epidemiology , Influenza in Birds/virology , Animals , Animals, Wild , British Columbia/epidemiology , Disease Outbreaks/veterinary , Influenza A Virus, H5N2 Subtype/genetics , Prevalence
18.
J Virol Methods ; 136(1-2): 17-23, 2006 Sep.
Article in English | MEDLINE | ID: mdl-16690139

ABSTRACT

An oligonucleotide suspension microarray (Luminex microsphere system) was developed for detection and differentiation of animal pestiviruses: classical swine fever virus (CSFV), bovine viral diarrhea virus types 1 and 2 (BVDV1 and BVDV2), and border disease virus (BDV). Species-specific and pestivirus-common oligonucleotide probes were designed to the 5' UTR region and conjugated to individual color-coded Luminex carboxy beads (probe beads). Target pestivirus sequences were amplified by asymmetric PCR using a biotinylated reverse primer and a forward and reverse primer ratio of 1:5. The biotinylated products were hybridized to eight probe beads in a multiplex assay and analyzed using streptavidin conjugated to a fluorescent reporter molecule. The assay was able to detect and differentiate all 40 strains of CSFV, BVDV1, BVDV2 and BDV tested. The analytical sensitivity was determined to be 0.2-10 TCID50/ml. The major advantages of the DNA-microsphere suspension microarray, as a low density array, are its ease of handling and ability to simultaneously detect and type multiple infectious agents.


Subject(s)
Oligonucleotide Array Sequence Analysis/methods , Pestivirus/classification , Pestivirus/genetics , 5' Untranslated Regions/genetics , Biotin , Fluorescence , Genotype , Microspheres , Polymerase Chain Reaction/methods , RNA, Viral/genetics , Sensitivity and Specificity , Staining and Labeling , Streptavidin
19.
J Virol Methods ; 137(1): 88-94, 2006 Oct.
Article in English | MEDLINE | ID: mdl-16837068

ABSTRACT

A microsphere immunoassay (MIA) was developed for the detection of serum antibodies to avian influenza virus. A recombinant influenza A nucleoprotein expressed in baculovirus was conjugated to microspheres and incubated with antibodies. High median fluorescent intensities (MFIs) were obtained with a monoclonal antibody and positive chicken sera. Chickens were inoculated with 10 strains of avian influenza virus representing different subtypes, including high and low pathogenic H5 and H7 subtypes. Three hundred and fifty-four samples from experimentally infected chickens and controls were tested with a competitive ELISA (cELISA) and the MIA. MFIs were converted to positive/negative (PN) ratios. The results of both tests, as percentage inhibition and PN ratio, showed a high correlation (R2 = 0.77). From the comparison data, a ratio of > or =4.5 was selected as the cut-off value for positivity in the MIA. Using this cut-off value, the sensitivity and specificity of the MIA relative to the cELISA when all discordant experimental samples were retested was 99.3 and 93.1%, respectively. The relative specificity increased to 94.7% when additional negative sera (n = 68) were tested. The MIA may be useful for surveillance testing and as a screening test for flocks infected with low pathogenic avian influenza virus and could be expanded for simultaneous detection of antibodies against other avian infectious disease agents.


Subject(s)
Antibodies, Viral/blood , Immunoassay/methods , Influenza A virus/immunology , Influenza in Birds/immunology , Animals , Biotin , Chickens , Enzyme-Linked Immunosorbent Assay , Fluorescence , Microspheres , Nucleocapsid Proteins , Nucleoproteins/chemistry , Nucleoproteins/genetics , Nucleoproteins/immunology , RNA-Binding Proteins/chemistry , RNA-Binding Proteins/genetics , RNA-Binding Proteins/immunology , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/immunology , Sensitivity and Specificity , Statistics as Topic , Streptavidin , Viral Core Proteins/chemistry , Viral Core Proteins/genetics , Viral Core Proteins/immunology
20.
J Wildl Dis ; 52(1): 33-46, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26540179

ABSTRACT

The Canadian prairies are one of the most important breeding and staging areas for migratory waterfowl in North America. Hundreds of thousands of waterfowl of numerous species from multiple flyways converge in and disperse from this region annually; therefore this region may be a key area for potential intra- and interspecific spread of infectious pathogens among migratory waterfowl in the Americas. Using Blue-winged Teal (Anas discors, BWTE), which have the most extensive migratory range among waterfowl species, we investigated ecologic risk factors for infection and antibody status to avian influenza virus (AIV), West Nile virus (WNV), and avian paramyxovirus-1 (APMV-1) in the three prairie provinces (Alberta, Saskatchewan, and Manitoba) prior to fall migration. We used generalized linear models to examine infection or evidence of exposure in relation to host (age, sex, body condition, exposure to other infections), spatiotemporal (year, province), population-level (local population densities of BWTE, total waterfowl densities), and environmental (local pond densities) factors. The probability of AIV infection in BWTE was associated with host factors (e.g., age and antibody status), population-level factors (e.g., local BWTE population density), and year. An interaction between age and AIV antibody status showed that hatch year birds with antibodies to AIV were more likely to be infected, suggesting an antibody response to an active infection. Infection with AIV was positively associated with local BWTE density, supporting the hypothesis of density-dependent transmission. The presence of antibodies to WNV and APMV-1 was positively associated with age and varied among years. Furthermore, the probability of being WNV antibody positive was positively associated with pond density rather than host population density, likely because ponds provide suitable breeding habitat for mosquitoes, the primary vectors for transmission. Our findings highlight the importance of spatiotemporal, environmental, and host factors at the individual and population levels, all of which may influence dynamics of these and other viruses in wild waterfowl populations.


Subject(s)
Bird Diseases/virology , Ducks , Influenza in Birds/epidemiology , Newcastle Disease/epidemiology , West Nile Fever/veterinary , Alberta/epidemiology , Animals , Antibodies, Viral/blood , Bird Diseases/epidemiology , Ducks/virology , Female , Linear Models , Male , Manitoba/epidemiology , Models, Biological , Newcastle disease virus/immunology , Orthomyxoviridae/immunology , Ponds , Prevalence , Risk Factors , Saskatchewan/epidemiology , West Nile Fever/epidemiology , West Nile virus/immunology
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