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2.
Hum Mol Genet ; 20(2): 345-53, 2011 Jan 15.
Article in English | MEDLINE | ID: mdl-21044948

ABSTRACT

We performed a genome-wide association study (GWAS) in 1705 Parkinson's disease (PD) UK patients and 5175 UK controls, the largest sample size so far for a PD GWAS. Replication was attempted in an additional cohort of 1039 French PD cases and 1984 controls for the 27 regions showing the strongest evidence of association (P< 10(-4)). We replicated published associations in the 4q22/SNCA and 17q21/MAPT chromosome regions (P< 10(-10)) and found evidence for an additional independent association in 4q22/SNCA. A detailed analysis of the haplotype structure at 17q21 showed that there are three separate risk groups within this region. We found weak but consistent evidence of association for common variants located in three previously published associated regions (4p15/BST1, 4p16/GAK and 1q32/PARK16). We found no support for the previously reported SNP association in 12q12/LRRK2. We also found an association of the two SNPs in 4q22/SNCA with the age of onset of the disease.


Subject(s)
Chromosomes, Human, Pair 17/genetics , Genetic Predisposition to Disease , Parkinson Disease/genetics , alpha-Synuclein/genetics , Age of Onset , Case-Control Studies , Genome-Wide Association Study , Haplotypes , Humans , Polymorphism, Single Nucleotide , Sample Size , White People
3.
ACS Appl Mater Interfaces ; 15(30): 36224-36232, 2023 Aug 02.
Article in English | MEDLINE | ID: mdl-37466037

ABSTRACT

We report a novel delithiation process for epitaxial thin films of LiCoO2(001) cathodes using only physical methods, based on ion sputtering and annealing cycles. Preferential Li sputtering followed by annealing produces a surface layer with a Li molar fraction in the range 0.5 < x < 1, characterized by good crystalline quality. This delithiation procedure allows the unambiguous identification of the effects of Li extraction without chemical byproducts and experimental complications caused by electrolyte interaction with the LiCoO2 surface. An analysis by X-ray photoelectron spectroscopy (XPS) and X-ray absorption spectroscopy (XAS) provides a detailed description of the delithiation process and the role of O and Co atoms in charge compensation. We observe the simultaneous formation of Co4+ ions and of holes localized near O atoms upon Li removal, while the surface shows a (2 × 1) reconstruction. The delithiation method described here can be applied to other crystalline battery elements and provide information on their properties that is otherwise difficult to obtain.

4.
Mov Disord ; 27(12): 1522-9, 2012 Oct.
Article in English | MEDLINE | ID: mdl-22956510

ABSTRACT

Approximately 3.6% of patients with Parkinson's disease develop symptoms before age 45. Early-onset Parkinson's disease (EOPD) patients have a higher familial recurrence risk than late-onset patients, and 3 main recessive EOPD genes have been described. We aimed to establish the prevalence of mutations in these genes in a UK cohort and in previous studies. We screened 136 EOPD probands from a high-ascertainment regional and community-based prevalence study for pathogenic mutations in PARK2 (parkin), PINK1, PARK7 (DJ-1), and exon 41 of LRRK2. We also carried out a systematic review, calculating the proportion of cases with pathogenic mutations in previously reported studies. We identified 5 patients with pathogenic PARK2, 1 patient with PINK1, and 1 with LRRK2 mutations. The rate of mutations overall was 5.1%. Mutations were more common in patients with age at onset (AAO) < 40 (9.5%), an affected first-degree relative (6.9%), an affected sibling (28.6%), or parental consanguinity (50%). In our study EOPD mutation carriers were more likely to present with rigidity and dystonia, and 6 of 7 mutation carriers had lower limb symptoms at onset. Our systematic review included information from >5800 unique cases. Overall, the weighted mean proportion of cases with PARK2 (parkin), PINK1, and PARK7 (DJ-1) mutations was 8.6%, 3.7%, and 0.4%, respectively. PINK1 mutations were more common in Asian subjects. The overall frequency of mutations in known EOPD genes was lower than previously estimated. Our study shows an increased likelihood of mutations in patients with lower AAO, family history, or parental consanguinity.


Subject(s)
Intracellular Signaling Peptides and Proteins/genetics , Mutation/genetics , Oncogene Proteins/genetics , Parkinson Disease/genetics , Protein Kinases/genetics , Protein Serine-Threonine Kinases/genetics , Ubiquitin-Protein Ligases/genetics , Cohort Studies , DNA Mutational Analysis , Female , Humans , Leucine-Rich Repeat Serine-Threonine Protein Kinase-2 , Male , Parkinson Disease/epidemiology , Protein Deglycase DJ-1 , United Kingdom/epidemiology
5.
J Neurol ; 258(4): 647-55, 2011 Apr.
Article in English | MEDLINE | ID: mdl-21072532

ABSTRACT

Families with autosomal dominant frontotemporal dementia and amyotrophic lateral sclerosis (FTD/ALS) have previously been linked to a locus on chromosome 9p21. We describe the clinical phenotype and pathology of a large family with autosomal dominant FTD/ALS with nine affected members originating from Gwent in South Wales, UK. We also further refine the locus on chromosome 9p21 using a haplotype sharing approach and assess heterogeneity in 9p21 linked families. Within this family, affected individuals present with either FTD or ALS or both diseases simultaneously. In addition there was marked phenotypic variation including ataxia, Parkinsonism, psychosis and visuo-spatial cognitive deficits. The pathological features of the three cases described were consistent with type 2 FTD pathology, as previously reported in similar families. However, we also report distinctive cerebellar and glial pathology and a significant proportion of TDP-43 negative inclusions. No mutations in known genes for FTD or ALS were found. We identified a large 4.8-megabase haplotype on chromosome 9p21, which was shared by all affected family members. This haplotype overlaps and limits the previously reported FTD/ALS linkage region on chromosome 9p21. Sequencing of this region did not identify any evidence of a pathogenic exonic mutation. This suggests that the pathogenic change affects non-coding DNA and that the disease is caused by variation in gene or protein expression.


Subject(s)
Amyotrophic Lateral Sclerosis/complications , Amyotrophic Lateral Sclerosis/genetics , Chromosomes, Human, Pair 9/genetics , Frontotemporal Dementia/complications , Frontotemporal Dementia/genetics , Haplotypes/genetics , Adult , Amyotrophic Lateral Sclerosis/pathology , Brain/metabolism , DNA-Binding Proteins/metabolism , Family Health , Female , Frontotemporal Dementia/pathology , Gene Frequency , Genetic Testing , Genotype , Glial Fibrillary Acidic Protein/metabolism , Humans , Male , Middle Aged , Polymorphism, Single Nucleotide/genetics , Spinal Cord/metabolism
6.
Neuron ; 72(2): 257-68, 2011 Oct 20.
Article in English | MEDLINE | ID: mdl-21944779

ABSTRACT

The chromosome 9p21 amyotrophic lateral sclerosis-frontotemporal dementia (ALS-FTD) locus contains one of the last major unidentified autosomal-dominant genes underlying these common neurodegenerative diseases. We have previously shown that a founder haplotype, covering the MOBKL2b, IFNK, and C9ORF72 genes, is present in the majority of cases linked to this region. Here we show that there is a large hexanucleotide (GGGGCC) repeat expansion in the first intron of C9ORF72 on the affected haplotype. This repeat expansion segregates perfectly with disease in the Finnish population, underlying 46.0% of familial ALS and 21.1% of sporadic ALS in that population. Taken together with the D90A SOD1 mutation, 87% of familial ALS in Finland is now explained by a simple monogenic cause. The repeat expansion is also present in one-third of familial ALS cases of outbred European descent, making it the most common genetic cause of these fatal neurodegenerative diseases identified to date.


Subject(s)
Amyotrophic Lateral Sclerosis/genetics , Chromosomes, Human, Pair 9 , Frontotemporal Dementia/genetics , Microsatellite Repeats , Alleles , Female , Finland , Genetic Predisposition to Disease , Genotype , Haplotypes , Humans , Male , Pedigree , Polymorphism, Single Nucleotide
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