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1.
Mol Cell ; 78(6): 1252-1263.e3, 2020 06 18.
Article in English | MEDLINE | ID: mdl-32362315

ABSTRACT

Crossover recombination is critical for meiotic chromosome segregation, but how mammalian crossing over is accomplished is poorly understood. Here, we illuminate how strands exchange during meiotic recombination in male mice by analyzing patterns of heteroduplex DNA in recombinant molecules preserved by the mismatch correction deficiency of Msh2-/- mutants. Surprisingly, MSH2-dependent recombination suppression was not evident. However, a substantial fraction of crossover products retained heteroduplex DNA, and some provided evidence of MSH2-independent correction. Biased crossover resolution was observed, consistent with asymmetry between DNA ends in earlier intermediates. Many crossover products yielded no heteroduplex DNA, suggesting dismantling by D-loop migration. Unlike the complexity of crossovers in yeast, these simple modifications of the original double-strand break repair model-asymmetry in recombination intermediates and D-loop migration-may be sufficient to explain most meiotic crossing over in mice while also addressing long-standing questions related to Holliday junction resolution.


Subject(s)
Crossing Over, Genetic/physiology , Homologous Recombination/physiology , Meiosis/physiology , Animals , Chromosome Segregation/genetics , Crossing Over, Genetic/genetics , DNA Breaks, Double-Stranded , DNA Repair/genetics , DNA, Cruciform/genetics , DNA, Cruciform/metabolism , Homologous Recombination/genetics , Male , Meiosis/genetics , Mice , Mice, Inbred DBA , MutS Homolog 2 Protein/genetics , MutS Homolog 2 Protein/metabolism , Nucleic Acid Heteroduplexes/genetics
2.
Mol Cell ; 49(6): 1097-107, 2013 Mar 28.
Article in English | MEDLINE | ID: mdl-23434370

ABSTRACT

Faithful duplication of the genome in S phase followed by its accurate segregation in mitosis is essential to maintain genomic integrity. Recent studies have suggested that proteins involved in DNA transactions are also required for whole-chromosome stability. Here we demonstrate that the MRN (Mre11, Rad50, and Nbs1) complex and CtIP are required for accurate chromosome segregation. Depletion of Mre11 or CtIP, antibody-mediated inhibition of Mre11, or small-molecule inhibition of MRN using mirin results in metaphase chromosome alignment defects in Xenopus egg extracts. Similarly, loss of MRN function adversely affects spindle assembly around DNA-coated beads in egg extracts. Inhibition of MRN function in mammalian cells triggers a metaphase delay and disrupts the RCC1-dependent RanGTP gradient. Addition of the Mre11 inhibitor mirin to egg extracts and mammalian cells reduces RCC1 association with mitotic chromosomes. Thus, the MRN-CtIP pathway contributes to Ran-dependent mitotic spindle assembly by modulating RCC1 chromosome association.


Subject(s)
Carrier Proteins/metabolism , Chromosome Segregation , Metaphase , Nuclear Proteins/metabolism , Spindle Apparatus/metabolism , Acid Anhydride Hydrolases , Animals , Cell Cycle Proteins/metabolism , Cell Cycle Proteins/physiology , Cell Extracts , Chromosomes, Human/genetics , Chromosomes, Human/metabolism , DNA Repair Enzymes/physiology , DNA-Binding Proteins/physiology , Endodeoxyribonucleases , Guanine Nucleotide Exchange Factors/metabolism , HeLa Cells , Humans , MRE11 Homologue Protein , Microtubule-Associated Proteins/metabolism , Mitosis , Multiprotein Complexes/physiology , Nuclear Proteins/physiology , Protein Binding , Single-Cell Analysis , Xenopus , Xenopus Proteins/physiology , ran GTP-Binding Protein/metabolism
3.
Mol Cell ; 49(4): 657-67, 2013 Feb 21.
Article in English | MEDLINE | ID: mdl-23273981

ABSTRACT

DNA double-strand breaks (DSBs) activate a DNA damage response (DDR) that coordinates checkpoint pathways with DNA repair. ATM and ATR kinases are activated sequentially. Homology-directed repair (HDR) is initiated by resection of DSBs to generate 3' single-stranded DNA overhangs. How resection and HDR are activated during DDR is not known, nor are the roles of ATM and ATR in HDR. Here, we show that CtIP undergoes ATR-dependent hyperphosphorylation in response to DSBs. ATR phosphorylates an invariant threonine, T818 of Xenopus CtIP (T859 in human). Nonphosphorylatable CtIP (T818A) does not bind to chromatin or initiate resection. Our data support a model in which ATM activity is required for an early step in resection, leading to ATR activation, CtIP-T818 phosphorylation, and accumulation of CtIP on chromatin. Chromatin binding by modified CtIP precedes extensive resection and full checkpoint activation.


Subject(s)
Cell Cycle Proteins/metabolism , DNA Breaks, Double-Stranded , Protein Processing, Post-Translational , Protein Serine-Threonine Kinases/metabolism , Tumor Suppressor Proteins/metabolism , Xenopus Proteins/metabolism , Amino Acid Sequence , Animals , Ataxia Telangiectasia Mutated Proteins , Cell Cycle Proteins/antagonists & inhibitors , Cell Cycle Proteins/physiology , Cell Extracts/isolation & purification , Chromatin/metabolism , Conserved Sequence , DNA Cleavage , DNA Repair , DNA-Binding Proteins/metabolism , HEK293 Cells , Humans , Molecular Sequence Annotation , Molecular Sequence Data , Peptide Fragments/chemistry , Phosphorylation , Protein Kinase Inhibitors/pharmacology , Protein Serine-Threonine Kinases/antagonists & inhibitors , Protein Serine-Threonine Kinases/physiology , Rabbits , Tumor Suppressor Proteins/chemistry , Xenopus Proteins/antagonists & inhibitors , Xenopus Proteins/chemistry , Xenopus Proteins/physiology , Xenopus laevis
4.
Semin Cell Dev Biol ; 54: 177-87, 2016 06.
Article in English | MEDLINE | ID: mdl-26880205

ABSTRACT

During meiosis, numerous DNA double-strand breaks (DSBs) are formed as part of the normal developmental program. This seemingly destructive behavior is necessary for successful meiosis, since repair of the DSBs through homologous recombination (HR) helps to produce physical links between the homologous chromosomes essential for correct chromosome segregation later in meiosis. However, DSB formation at such a massive scale also introduces opportunities to generate gross chromosomal rearrangements. In this review, we explore ways in which meiotic DSBs can result in such genomic alterations.


Subject(s)
Genomic Instability , Germ Cells/metabolism , Animals , Chromothripsis , DNA Breaks, Double-Stranded , Gene Rearrangement/genetics , Humans , Meiosis/genetics
5.
J Biol Chem ; 289(35): 24617-29, 2014 Aug 29.
Article in English | MEDLINE | ID: mdl-25016020

ABSTRACT

PALB2 links BRCA1 and BRCA2 in homologous recombinational repair of DNA double strand breaks (DSBs). Mono-allelic mutations in PALB2 increase the risk of breast, pancreatic, and other cancers, and biallelic mutations cause Fanconi anemia (FA). Like Brca1 and Brca2, systemic knock-out of Palb2 in mice results in embryonic lethality. In this study, we generated a hypomorphic Palb2 allele expressing a mutant PALB2 protein unable to bind BRCA1. Consistent with an FA-like phenotype, cells from the mutant mice showed hypersensitivity and chromosomal breakage when treated with mitomycin C, a DNA interstrand crosslinker. Moreover, mutant males showed reduced fertility due to impaired meiosis and increased apoptosis in germ cells. Interestingly, mutant meiocytes showed a significant defect in sex chromosome synapsis, which likely contributed to the germ cell loss and fertility defect. Our results underscore the in vivo importance of the PALB2-BRCA1 complex formation in DSB repair and male meiosis.


Subject(s)
BRCA1 Protein/metabolism , Infertility, Male/metabolism , Tumor Suppressor Proteins/metabolism , Amino Acid Sequence , Animals , BRCA1 Protein/chemistry , DNA Damage , DNA Repair , Fanconi Anemia Complementation Group N Protein , Homologous Recombination , Humans , In Situ Nick-End Labeling , Infertility, Male/genetics , Male , Mice , Molecular Sequence Data , Sequence Homology, Amino Acid , Tumor Suppressor Proteins/chemistry
6.
Mol Cell Biol ; 26(24): 9544-54, 2006 Dec.
Article in English | MEDLINE | ID: mdl-17030607

ABSTRACT

The nucleoprotein filament formed by Rad51 polymerization on single-stranded DNA is essential for homologous pairing and strand exchange. ATP binding is required for Rad51 nucleoprotein filament formation and strand exchange, but ATP hydrolysis is not required for these functions in vitro. Previous studies have shown that a yeast strain expressing the rad51-K191R allele is sensitive to ionizing radiation, suggesting an important role for ATP hydrolysis in vivo. The recruitment of Rad51-K191R to double-strand breaks is defective in vivo, and this phenotype can be suppressed by elimination of the Srs2 helicase, an antagonist of Rad51 filament formation. The phenotype of the rad51-K191R strain is also suppressed by overexpression of Rad54. In vitro, the Rad51-K191R protein exhibits a slight decrease in binding to DNA, consistent with the defect in presynaptic filament formation. However, the rad51-K191R mutation is dominant in heterozygous diploids, indicating that the defect is not due simply to reduced affinity for DNA. We suggest the Rad51-K191R protein either forms an altered filament or is defective in turnover, resulting in a reduced pool of free protein available for DNA binding.


Subject(s)
Adenosine Triphosphatases/deficiency , Adenosine Triphosphatases/physiology , Amino Acid Substitution/genetics , Nucleoproteins/metabolism , Rad51 Recombinase/physiology , Saccharomyces cerevisiae Proteins/physiology , Saccharomyces cerevisiae/enzymology , Adenosine Triphosphatases/genetics , Alleles , Arginine/genetics , DNA Helicases/genetics , DNA Repair Enzymes , DNA, Fungal/metabolism , DNA-Binding Proteins/metabolism , Gamma Rays , Gene Deletion , Lysine/genetics , Mutation , Protein Transport/genetics , Rad51 Recombinase/genetics , Rad51 Recombinase/radiation effects , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/radiation effects , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae Proteins/radiation effects
7.
J Invest Dermatol ; 122(1): 159-66, 2004 Jan.
Article in English | MEDLINE | ID: mdl-14962104

ABSTRACT

To determine whether inhibition of PKC-beta activity decreases pigmentation, paired cultures of primary human melanocytes were first pretreated with bisindolylmaleimide (Bis), a selective PKC inhibitor, or vehicle alone for 30 min, and then treated with TPA for an additional 90 min to activate PKC in the presence of Bis. Bis blocked the expected induction of tyrosinase activity by activation of PKC. Addition of a peptide corresponding to amino acids 501-511 of tyrosinase containing its PKC-beta phosphorylation site, a presumptive PKC-beta pseudosubstrate, gave similar results. To determine whether Bis reduces pigmentation in vivo, the backs of four shaved and depilated pigmented guinea pigs were UV irradiated with a solar simulator for 2 wk excluding weekends. Compared to vehicle alone, Bis (300 microM), applied twice daily to paired sites for various periods encompassing the irradiation period, decreased tanning. Bis also, although less strikingly, reduced basal epidermal melanin when topically applied twice daily, 5 d per wk, for 3 wk to shaved and depilated unirradiated skin. Moreover, topical application of Bis (100 microM) once daily for 9 d to the freshly depilated backs of 8-wk-old mice markedly lightened the color of regrowing hair. These results demonstrate that inhibiting PKC activity in vivo selectively blocks tanning and reduces basal pigmentation in the epidermis and in anagen hair shafts.


Subject(s)
Enzyme Inhibitors/pharmacology , Hair Color/physiology , Indoles/pharmacology , Maleimides/pharmacology , Melanocytes/enzymology , Protein Kinase C/antagonists & inhibitors , Skin Pigmentation/physiology , Animals , Cells, Cultured , Epidermal Cells , Female , Guinea Pigs , Hair Color/drug effects , Humans , In Vitro Techniques , Melanins/metabolism , Melanocytes/cytology , Mice , Mice, Inbred C57BL , Microscopy, Confocal , Monophenol Monooxygenase/metabolism , Protein Kinase C/metabolism , Protein Kinase C beta , Skin Pigmentation/drug effects , Skin Pigmentation/radiation effects , Ultraviolet Rays
8.
J Cell Biol ; 194(5): 705-20, 2011 Sep 05.
Article in English | MEDLINE | ID: mdl-21893598

ABSTRACT

DNA double-strand break (DSB) resection, which results in RPA-bound single-stranded DNA (ssDNA), is activated in S phase by Cdk2. RPA-ssDNA activates the ATR-dependent checkpoint and homology-directed repair (HDR) via Rad51-dependent mechanisms. On the other hand, the fate of DSBs sustained during vertebrate M phase is largely unknown. We use cell-free Xenopus laevis egg extracts to examine the recruitment of proteins to chromatin after DSB formation. We find that S-phase extract recapitulates a two-step resection mechanism. M-phase chromosomes are also resected in cell-free extracts and cultured human cells. In contrast to the events in S phase, M-phase resection is solely dependent on MRN-CtIP. Despite generation of RPA-ssDNA, M-phase resection does not lead to ATR activation or Rad51 chromatin association. Remarkably, we find that Cdk1 permits resection by phosphorylation of CtIP but also prevents Rad51 binding to the resected ends. We have thus identified Cdk1 as a critical regulator of DSB repair in M phase. Cdk1 induces persistent ssDNA-RPA overhangs in M phase, thereby preventing both classical NHEJ and Rad51-dependent HDR.


Subject(s)
CDC2 Protein Kinase/metabolism , Cell Division/physiology , DNA Breaks, Double-Stranded , DNA Repair/physiology , Rad51 Recombinase/metabolism , Tumor Suppressor Proteins/metabolism , Xenopus Proteins/metabolism , Animals , Antigens, Nuclear/metabolism , Ataxia Telangiectasia Mutated Proteins , CDC2 Protein Kinase/antagonists & inhibitors , Cell Cycle Proteins/metabolism , Cell Nucleus/metabolism , Cell-Free System , Checkpoint Kinase 1 , Chromatin/metabolism , Cyclin-Dependent Kinase 2/antagonists & inhibitors , Cyclin-Dependent Kinase 2/metabolism , DNA Helicases/metabolism , DNA, Single-Stranded/metabolism , DNA-Binding Proteins/metabolism , Endonucleases/metabolism , HeLa Cells , Histones/metabolism , Humans , Ku Autoantigen , MRE11 Homologue Protein , Meiosis/physiology , Mitosis/physiology , Nuclear Envelope/physiology , Ovum , Phosphorylation/drug effects , Protein Binding/drug effects , Protein Binding/physiology , Protein Kinase Inhibitors/pharmacology , Protein Kinases/metabolism , Protein Serine-Threonine Kinases/metabolism , RecQ Helicases/metabolism , Replication Protein A/metabolism , S Phase/physiology , Werner Syndrome Helicase , Xenopus Proteins/antagonists & inhibitors , Xenopus laevis
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