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1.

PAF1, a Molecular Regulator of Promoter-Proximal Pausing by RNA Polymerase II.

Chen, Fei Xavier; Woodfin, Ashley R; Gardini, Alessandro; Rickels, Ryan A; Marshall, Stacy A; Smith, Edwin R; Shiekhattar, Ramin; Shilatifard, Ali.

Cell ; 162(5): 1003-15, 2015 Aug 27.

Article in English | MEDLINE | ID: mdl-26279188

2.

A histone modifier's ill-gotten copy gains.

Rickels, Ryan; Shilatifard, Ali.

Cell ; 154(3): 477-9, 2013 Aug 01.

Article in English | MEDLINE | ID: mdl-23911314

3.

A small UTX stabilization domain of Trr is conserved within mammalian MLL3-4/COMPASS and is sufficient to rescue loss of viability in null animals.

Rickels, Ryan; Wang, Lu; Iwanaszko, Marta; Ozark, Patrick A; Morgan, Marc A; Piunti, Andrea; Khalatyan, Natalia; Soliman, Shimaa H A; Rendleman, Emily J; Savas, Jeffrey N; Smith, Edwin R; Shilatifard, Ali.

Genes Dev ; 34(21-22): 1493-1502, 2020 11 01.

Article in English | MEDLINE | ID: mdl-33033055

4.

A cryptic Tudor domain links BRWD2/PHIP to COMPASS-mediated histone H3K4 methylation.

Morgan, Marc A J; Rickels, Ryan A; Collings, Clayton K; He, Xiaolin; Cao, Kaixiang; Herz, Hans-Martin; Cozzolino, Kira A; Abshiru, Nebiyu A; Marshall, Stacy A; Rendleman, Emily J; Sze, Christie C; Piunti, Andrea; Kelleher, Neil L; Savas, Jeffrey N; Shilatifard, Ali.

Genes Dev ; 31(19): 2003-2014, 2017 10 01.

Article in English | MEDLINE | ID: mdl-29089422

5.

An Evolutionary Conserved Epigenetic Mark of Polycomb Response Elements Implemented by Trx/MLL/COMPASS.

Rickels, Ryan; Hu, Deqing; Collings, Clayton K; Woodfin, Ashley R; Piunti, Andrea; Mohan, Man; Herz, Hans-Martin; Kvon, Evgeny; Shilatifard, Ali.

Mol Cell ; 63(2): 318-328, 2016 07 21.

Article in English | MEDLINE | ID: mdl-27447986

6.

Mitotic Transcriptional Activation: Clearance of Actively Engaged Pol II via Transcriptional Elongation Control in Mitosis.

Liang, Kaiwei; Woodfin, Ashley R; Slaughter, Brian D; Unruh, Jay R; Box, Andrew C; Rickels, Ryan A; Gao, Xin; Haug, Jeffrey S; Jaspersen, Sue L; Shilatifard, Ali.

Mol Cell ; 60(3): 435-45, 2015 Nov 05.

Article in English | MEDLINE | ID: mdl-26527278

7.

Drosophila TDP-43 RNA-Binding Protein Facilitates Association of Sister Chromatid Cohesion Proteins with Genes, Enhancers and Polycomb Response Elements.

Swain, Amanda; Misulovin, Ziva; Pherson, Michelle; Gause, Maria; Mihindukulasuriya, Kathie; Rickels, Ryan A; Shilatifard, Ali; Dorsett, Dale.

PLoS Genet ; 12(9): e1006331, 2016 Sep.

Article in English | MEDLINE | ID: mdl-27662615

8.

CATACOMB: An endogenous inducible gene that antagonizes H3K27 methylation activity of Polycomb repressive complex 2 via an H3K27M-like mechanism.

Piunti, Andrea; Smith, Edwin R; Morgan, Marc A J; Ugarenko, Michal; Khaltyan, Natalia; Helmin, Kathryn A; Ryan, Caila A; Murray, David C; Rickels, Ryan A; Yilmaz, Bahar D; Rendleman, Emily J; Savas, Jeffrey N; Singer, Benjamin D; Bulun, Serdar E; Shilatifard, Ali.

Sci Adv ; 5(7): eaax2887, 2019 07.

Article in English | MEDLINE | ID: mdl-31281901

9.

Enhancer Logic and Mechanics in Development and Disease.

Rickels, Ryan; Shilatifard, Ali.

Trends Cell Biol ; 28(8): 608-630, 2018 08.

Article in English | MEDLINE | ID: mdl-29759817

10.

Histone H3K4 monomethylation catalyzed by Trr and mammalian COMPASS-like proteins at enhancers is dispensable for development and viability.

Rickels, Ryan; Herz, Hans-Martin; Sze, Christie C; Cao, Kaixiang; Morgan, Marc A; Collings, Clayton K; Gause, Maria; Takahashi, Yoh-Hei; Wang, Lu; Rendleman, Emily J; Marshall, Stacy A; Krueger, Annika; Bartom, Elizabeth T; Piunti, Andrea; Smith, Edwin R; Abshiru, Nebiyu A; Kelleher, Neil L; Dorsett, Dale; Shilatifard, Ali.

Nat Genet ; 49(11): 1647-1653, 2017 Nov.

Article in English | MEDLINE | ID: mdl-28967912

11.

Histone H3 lysine-to-methionine mutants as a paradigm to study chromatin signaling.

Herz, Hans-Martin; Morgan, Marc; Gao, Xin; Jackson, Jessica; Rickels, Ryan; Swanson, Selene K; Florens, Laurence; Washburn, Michael P; Eissenberg, Joel C; Shilatifard, Ali.

Science ; 345(6200): 1065-70, 2014 Aug 29.

Article in English | MEDLINE | ID: mdl-25170156

12.

The Drosophila gypsy insulator supports transvection in the presence of the vestigial enhancer.

Schoborg, Todd; Kuruganti, Srilalitha; Rickels, Ryan; Labrador, Mariano.

PLoS One ; 8(11): e81331, 2013.

Article in English | MEDLINE | ID: mdl-24236213

13.

Chromatin insulator bodies are nuclear structures that form in response to osmotic stress and cell death.

Schoborg, Todd; Rickels, Ryan; Barrios, Josh; Labrador, Mariano.

J Cell Biol ; 202(2): 261-76, 2013 Jul 22.

Article in English | MEDLINE | ID: mdl-23878275

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