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1.
Electrophoresis ; 2024 Jun 27.
Article in English | MEDLINE | ID: mdl-38937936

ABSTRACT

Along with the rapid development of cellular biological research in recent years, there has been an urgent need for a high-speed, high-precision method of separating target cells from a highly heterogeneous cell population. Among the various cell separation technologies proposed so far, dielectrophoresis (DEP)-based approaches have shown particular promise because they are noninvasive to cells. We have developed a new DEP-based device to separate large numbers of live and dead cells of the human mammary cell line MCF10A. In this study, we validated the separation performance of this device. The results showed the successful separation of a higher percentage of cells than in previous studies, with a separation efficiency higher than 90%. In the past, there have been no confirmed cases in which a separation rate of over 90% and high-speed processing of a large number of cells were simultaneously achieved. It was shown that the proposed device can process large numbers of cells at high speed and with high accuracy.

2.
Hum Mutat ; 43(11): 1557-1566, 2022 11.
Article in English | MEDLINE | ID: mdl-36057977

ABSTRACT

To determine the phase of NUDT15 sequence variants for more comprehensive star (*) allele diplotyping, we developed a novel long-read single-molecule real-time HiFi amplicon sequencing method. A 10.5 kb NUDT15 amplicon assay was validated using reference material positive controls and additional samples for specimen type and blinded accuracy assessment. Triplicate NUDT15 HiFi sequencing of two reference material samples had nonreference genotype concordances of >99.9%, indicating that the assay is robust. Notably, short-read genome sequencing of a subset of samples was unable to determine the phase of star (*) allele-defining NUDT15 variants, resulting in ambiguous diplotype results. In contrast, long-read HiFi sequencing phased all variants across the NUDT15 amplicons, including a *2/*9 diplotype that previously was characterized as *1/*2 in the 1000 Genomes Project v3 data set. Assay throughput was also tested using 8.5 kb amplicons from 100 Ashkenazi Jewish individuals, which identified a novel NUDT15 *1 suballele (c.-121G>A) and a rare likely deleterious coding variant (p.Pro129Arg). Both novel alleles were Sanger confirmed and assigned as *1.007 and *20, respectively, by the PharmVar Consortium. Taken together, NUDT15 HiFi amplicon sequencing is an innovative method for phased full-gene characterization and novel allele discovery, which could improve NUDT15 pharmacogenomic testing and subsequent phenotype prediction.


Subject(s)
Pharmacogenetics , Alleles , Genotype , Haplotypes , Humans , Sequence Analysis, DNA/methods
3.
J Hum Genet ; 65(5): 437-444, 2020 May.
Article in English | MEDLINE | ID: mdl-31983733

ABSTRACT

Increasing enthusiasm for clinical pharmacogenetic testing and the availability of pharmacogenetic-based guidelines indicate that pediatricians will increasingly be expected to interpret and apply pharmacogenetic test results into medical care. Previous studies have identified a lack of knowledge on pharmacogenetics across many physician specialties; however, this has not been systematically assessed among pediatricians. To evaluate pediatrician knowledge, attitude, and educational interest in pharmacogenetics, we surveyed physician cohorts from both the United States (U.S.) and Japan. A total of 282 pediatricians (210 from the U.S. and 72 from Japan) participated in an anonymous survey (online or hardcopy) on pharmacogenetics knowledge, perception, and education. Over 50% of all respondents had >10 years of clinical experience and >75% had some prior education in genetics. However, <10% felt they were familiar with pharmacogenetics, which was very consistent with <20% of the U.S. pediatricians correctly responding to a codeine/CYP2D6 pharmacogenetics knowledge question and <10% of U.S. pediatricians being aware of the Clinical Pharmacogenetics Implementation Consortium (CPIC). Despite being generally unfamiliar with pharmacogenetics, >80% of all respondents indicated that implementation of clinical pharmacogenetic testing will improve efficacy and safety, and that pediatricians should be capable of applying this testing to their practice. Moreover, the majority (83.1%) were interested in educational opportunities on pharmacogenetics, particularly on result interpretation and therapeutic recommendations. Taken together, these data indicate that although practical knowledge of pharmacogenetics among pediatricians in the U.S. and Japan is currently very low, their interest in clinical pharmacogenetics and related education is high, which will likely facilitate future implementation.


Subject(s)
Health Knowledge, Attitudes, Practice , Pediatricians , Pharmacogenetics , Adult , Female , Humans , Japan , Male , Middle Aged , United States
4.
Hum Mutat ; 40(11): e37-e51, 2019 11.
Article in English | MEDLINE | ID: mdl-31260137

ABSTRACT

The human CYP2C locus harbors the polymorphic CYP2C18, CYP2C19, CYP2C9, and CYP2C8 genes, and of these, CYP2C19 and CYP2C9 are directly involved in the metabolism of ~15% of all medications. All variant CYP2C19 and CYP2C9 star (*) allele haplotypes currently cataloged by the Pharmacogene Variation (PharmVar) Consortium are defined by sequence variants. To determine if structural variation also occurs at the CYP2C locus, the 10q23.33 region was interrogated across deidentified clinical chromosomal microarray (CMA) data from 20,642 patients tested at two academic medical centers. Fourteen copy number variants that affected the coding region of CYP2C genes were detected in the clinical CMA cohorts, which ranged in size from 39.2 to 1,043.3 kb. Selected deletions and duplications were confirmed by MLPA or ddPCR. Analysis of the clinical CMA and an additional 78,839 cases from the Database of Genomic Variants (DGV) and ClinGen (total n = 99,481) indicated that the carrier frequency of a CYP2C structural variant is ~1 in 1,000, with ~1 in 2,000 being a CYP2C19 full gene or partial-gene deletion carrier, designated by PharmVar as CYP2C19*36 and *37, respectively. Although these structural variants are rare in the general population, their detection will likely improve metabolizer phenotype prediction when interrogated for research and/or clinical testing.


Subject(s)
Cytochrome P-450 Enzyme System/genetics , Genetic Loci , Genetic Variation , Alleles , Cytochrome P-450 Enzyme System/chemistry , DNA Copy Number Variations , Gene Duplication , Haplotypes , Humans , Multigene Family , Sequence Deletion
5.
Diabetologia ; 59(8): 1714-23, 2016 08.
Article in English | MEDLINE | ID: mdl-27185256

ABSTRACT

AIMS/HYPOTHESIS: Intrauterine growth restriction (IUGR) is associated with increased susceptibility to obesity, metabolic syndrome and type 2 diabetes. Although the mechanisms underlying the developmental origins of metabolic disease are poorly understood, evidence suggests that epigenomic alterations play a critical role. We sought to identify changes in DNA methylation patterns that are associated with IUGR in CD3(+) T cells purified from umbilical cord blood obtained from male newborns who were appropriate for gestational age (AGA) or who had been exposed to IUGR. METHODS: CD3(+) T cells were isolated from cord blood obtained from IUGR and AGA infants. The genome-wide methylation profile in eight AGA and seven IUGR samples was determined using the HELP tagging assay. Validation analysis using targeted bisulfite sequencing and bisulfite massARRAY was performed on the original cohort as well as biological replicates consisting of two AGA and four IUGR infants. The Segway algorithm was used to identify methylation changes within regulatory regions of the genome. RESULTS: A global shift towards hypermethylation in IUGR was seen compared with AGA (89.8% of 4,425 differentially methylated loci), targeted to regulatory regions of the genome, specifically promoters and enhancers. Pathway analysis identified dysregulation of pathways involved in metabolic disease (type 2 diabetes mellitus, insulin signalling, mitogen-activated protein kinase signalling) and T cell development, regulation and activation (T cell receptor signalling), as well as transcription factors (TCF3, LEF1 and NFATC) that regulate T cells. Furthermore, bump-hunting analysis revealed differentially methylated regions in PRDM16 and HLA-DPB1, genes important for adipose tissue differentiation, stem cell maintenance and function and T cell activation. CONCLUSIONS/INTERPRETATION: Our findings suggest that the alterations in methylation patterns observed in IUGR CD3(+) T cells may have functional consequences in targeted genes, regulatory regions and transcription factors. These may serve as biomarkers to identify those at 'high risk' for diminished attainment of full health potential who can benefit from early interventions. ACCESS TO RESEARCH MATERIALS: HELP tagging data: Gene Expression Omnibus database (GSE77268), scheduled to be released on 25 January 2019.


Subject(s)
CD3 Complex/metabolism , DNA Methylation/physiology , Fetal Blood/metabolism , Fetal Growth Retardation/metabolism , T-Lymphocytes/metabolism , Adult , Basic Helix-Loop-Helix Transcription Factors/metabolism , Cells, Cultured , DNA Methylation/genetics , DNA-Binding Proteins/metabolism , Female , Fetal Growth Retardation/genetics , Gestational Age , HLA-DP beta-Chains/metabolism , Humans , Lymphoid Enhancer-Binding Factor 1/metabolism , NFATC Transcription Factors/metabolism , Pregnancy , Transcription Factors/metabolism
6.
Biochim Biophys Acta ; 1842(3): 507-519, 2014 Mar.
Article in English | MEDLINE | ID: mdl-23872578

ABSTRACT

The incidence of metabolic disease, including type 2 diabetes and obesity, has increased to epidemic levels in recent years. A growing body of evidence suggests that the intrauterine environment plays a key role in the development of metabolic disease in offspring. Among other perturbations in early life, alteration in the provision of nutrients has profound and lasting effects on the long term health and well being of offspring. Rodent and non-human primate models provide a means to understand the underlying mechanisms of this programming effect. These different models demonstrate converging effects of a maternal high fat diet on insulin and glucose metabolism, energy balance, cardiovascular function and adiposity in offspring. Furthermore, evidence suggests that the early life environment can result in epigenetic changes that set the stage for alterations in key pathways of metabolism that lead to type 2 diabetes or obesity. Identifying and understanding the causal factors responsible for this metabolic dysregulation is vital to curtailing these epidemics. This article is part of a Special Issue entitled: Modulation of Adipose Tissue in Health and Disease.


Subject(s)
Diabetes Mellitus, Type 2/metabolism , Energy Metabolism , Epigenesis, Genetic , Obesity/genetics , Adipose Tissue/growth & development , Adipose Tissue/metabolism , Adipose Tissue/pathology , Animals , Diabetes Mellitus, Type 2/pathology , Diet, High-Fat , Disease Models, Animal , Female , Humans , Maternal Nutritional Physiological Phenomena , Mice , Obesity/metabolism , Obesity/pathology , Pregnancy
7.
Reprod Biol Endocrinol ; 12: 80, 2014 Aug 18.
Article in English | MEDLINE | ID: mdl-25135621

ABSTRACT

BACKGROUND: Fetal adaptations to high fat (HF) diet in utero (IU) that may predispose to Metabolic Syndrome (MetS) in adulthood include changes in fetal hepatic gene expression. Studies were performed to determine whether maternal exposure to HF diet at different stages during pregnancy had different effects on the fetus, including hepatic gene expression. METHODS: Female wild type mice were fed either a HF or breeding chow (C) for 2 wks prior to mating. The experimental groups were composed of embryonic day (e) 18.5 fetuses obtained from WT female mice that were fed HF (HF, 35.5% fat) or breeding chow (C, 9.5% fat) for 2 wk before mating until e9.5 of pregnancy (periconception-midpregnancy). At e9.5 dams were switched to the opposite diet (C-HF or HF-C). RESULTS: Exposure to HF diet throughout pregnancy reduced maternal weight gain compared to C diet (p < 0.02 HF vs. C). HF-C dams had significantly decreased adiponectin levels and litter size when compared to C-HF (p < 0.02 HF-C vs C-HF). Independent of the timing of exposure to HF, fetal weight and length were significantly decreased when compared to C diet (HF, C-HF and HF-C vs. C p < 0.02). HF diet during the second half of pregnancy increased expression of genes in the fetal liver associated with fetal growth (C-HF vs C p < 0.001), glucose production (C-HF vs C p < 0.04), oxidative stress and inflammation (C-HF vs C p < 0.01) compared to C diet. CONCLUSIONS: This model defines that there are critical periods during gestation in which the fetus is actively shaped by the environment. Early exposure to a HF diet determines litter size while exposure to HF during the second half of pregnancy leads to dysregulation of expression of key genes responsible for fetal growth, hepatic glucose production and oxidative stress. These findings underscore the importance of future studies designed to clarify how these critical periods may influence future risk of developing MetS later in life.


Subject(s)
Diet, High-Fat/adverse effects , Fetal Development , Fetal Growth Retardation/etiology , Hyperglycemia/etiology , Maternal Nutritional Physiological Phenomena , Metabolic Syndrome/etiology , Oxidative Stress , Adiponectin/blood , Animals , Animals, Outbred Strains , Crosses, Genetic , Female , Fetal Growth Retardation/immunology , Fetal Growth Retardation/metabolism , Fetal Weight , Gene Expression Regulation, Developmental , Gluconeogenesis , Glucose Transporter Type 4/genetics , Hyperglycemia/embryology , Hyperglycemia/immunology , Hyperglycemia/metabolism , Litter Size , Liver/embryology , Liver/immunology , Liver/metabolism , Metabolic Syndrome/embryology , Metabolic Syndrome/immunology , Metabolic Syndrome/metabolism , Mice, Mutant Strains
8.
Clin Transl Sci ; 14(1): 204-213, 2021 01.
Article in English | MEDLINE | ID: mdl-32931151

ABSTRACT

To develop a novel pharmacogenetic genotyping panel, a multidisciplinary team evaluated available evidence and selected 29 genes implicated in interindividual drug response variability, including 130 sequence variants and additional copy number variants (CNVs). Of the 29 genes, 11 had guidelines published by the Clinical Pharmacogenetics Implementation Consortium. Targeted genotyping and CNV interrogation were accomplished by multiplex single-base extension using the MassARRAY platform (Agena Biosciences) and multiplex ligation-dependent probe amplification (MRC Holland), respectively. Analytical validation of the panel was accomplished by a strategic combination of > 500 independent tests performed on 170 unique reference material DNA samples, which included sequence variant and CNV accuracy, reproducibility, and specimen (blood, saliva, and buccal swab) controls. Among the accuracy controls were 32 samples from the 1000 Genomes Project that were selected based on their enrichment of sequence variants included in the pharmacogenetic panel (VarCover.org). Coupled with publicly available samples from the Genetic Testing Reference Materials Coordination Program (GeT-RM), accuracy validation material was available for the majority (77%) of interrogated sequence variants (100% with average allele frequencies > 0.1%), as well as additional structural alleles with unique copy number signatures (e.g., CYP2D6*5, *13, *36, *68; CYP2B6*29; and CYP2C19*36). Accuracy and reproducibility for both genotyping and copy number were > 99.9%, indicating that the optimized panel platforms were precise and robust. Importantly, multi-ethnic allele frequencies of the interrogated variants indicate that the vast majority of the general population carries at least one of these clinically relevant pharmacogenetic variants, supporting the implementation of this panel for pharmacogenetic research and/or clinical implementation programs.


Subject(s)
Genotyping Techniques/methods , Pharmacogenomic Testing/methods , Cytochrome P-450 CYP2B6/genetics , Cytochrome P-450 CYP2B6/metabolism , Cytochrome P-450 CYP2C19/genetics , Cytochrome P-450 CYP2C19/metabolism , Cytochrome P-450 CYP2D6/genetics , Cytochrome P-450 CYP2D6/metabolism , DNA/blood , DNA/genetics , DNA/isolation & purification , DNA Copy Number Variations , Ethnicity/genetics , Gene Frequency , Humans , Mouth Mucosa/chemistry , Pharmacogenomic Variants , Reproducibility of Results , Saliva/chemistry
9.
Diabetes ; 69(8): 1650-1661, 2020 08.
Article in English | MEDLINE | ID: mdl-32444367

ABSTRACT

An adverse maternal in utero and lactation environment can program offspring for increased risk for metabolic disease. The aim of this study was to determine whether N-acetylcysteine (NAC), an anti-inflammatory antioxidant, attenuates programmed susceptibility to obesity and insulin resistance in offspring of mothers on a high-fat diet (HFD) during pregnancy. CD1 female mice were acutely fed a standard breeding chow or HFD. NAC was added to the drinking water (1 g/kg) of the treatment cohorts from embryonic day 0.5 until the end of lactation. NAC treatment normalized HFD-induced maternal weight gain and oxidative stress, improved the maternal lipidome, and prevented maternal leptin resistance. These favorable changes in the in utero environment normalized postnatal growth, decreased white adipose tissue (WAT) and hepatic fat, improved glucose and insulin tolerance and antioxidant capacity, reduced leptin and insulin, and increased adiponectin in HFD offspring. The lifelong metabolic improvements in the offspring were accompanied by reductions in proinflammatory gene expression in liver and WAT and increased thermogenic gene expression in brown adipose tissue. These results, for the first time, provide a mechanistic rationale for how NAC can prevent the onset of metabolic disease in the offspring of mothers who consume a typical Western HFD.


Subject(s)
Acetylcysteine/therapeutic use , Diet, High-Fat/adverse effects , Metabolic Diseases/drug therapy , Metabolic Diseases/metabolism , Adipose Tissue, Brown/drug effects , Adipose Tissue, Brown/metabolism , Adipose Tissue, White/drug effects , Adipose Tissue, White/metabolism , Adiposity/drug effects , Animals , Antioxidants/metabolism , Body Temperature , Calorimetry, Indirect , Female , Glucose Tolerance Test , Inflammation/drug therapy , Inflammation/metabolism , Injections, Intraperitoneal , Insulin Resistance , Male , Mice , Weight Gain/drug effects
10.
Syst Biol Reprod Med ; 66(4): 236-243, 2020 Aug.
Article in English | MEDLINE | ID: mdl-32603611

ABSTRACT

Obesity, known to cause a systemic elevation in monocyte chemotactic protein-1 (MCP-1), adversely affects normal ovarian function. The aim of this study was to determine whether MCP-1 plays a role in ovarian dysfunction that is related to obesity induced by high-fat (HF) diet intake. Wild type (WT) C57BL/6J mice were fed either normal chow (NC) (Group 1, control group) or HF diet (Group 2). To assess whether MCP-1 is involved in HF-diet-induced ovarian dysfunction, MCP-1 knock-out mice were fed HF diet (Group 3). Body weight, body fat composition, number of oocytes collected following ovarian superovulation with gonadotropins, ovarian macrophage markers and expression of genes important in folliculogenesis and steroidogenesis were quantified in the 3 groups of animals. Animals in Group 2 gained significant body weight and body mass, produced the fewest number of oocytes following superovulation, and had significant alterations in ovarian genes involved in folliculogenesis and steroidogenesis as well as genes involved in inflammation. Although animals in Group 3 had the highest body weight and body fat composition, they produced similar number of oocytes compared to animals in Group 1 but had different ovarian gene expression compared to Group 2. These findings suggest that MCP-1 gene knockout could reverse some of the adverse effects of obesity induced by HF diet intake. Future studies assessing ovarian histology in MCP-1 knock out mouse model will confirm our findings. MCP-1 inhibition could represent a future therapeutic target to protect ovarian health from the adverse effects of HF diet ingestion.


Subject(s)
Chemokine CCL2/metabolism , Diet, High-Fat/adverse effects , Obesity/etiology , Ovarian Diseases/etiology , Animals , Chemokine CCL2/genetics , Female , Macrophages/physiology , Mice , Mice, Inbred C57BL , Mice, Knockout , Obesity/complications , Obesity/metabolism , Obesity/prevention & control , Ovarian Diseases/metabolism , Ovarian Follicle/physiology , RNA, Messenger/metabolism , Steroids/metabolism
11.
Ultrasound Med Biol ; 45(7): 1663-1674, 2019 07.
Article in English | MEDLINE | ID: mdl-31003710

ABSTRACT

A vascular vector flow mapping (VFM) method visualizes 2-D cardiac flow dynamics by estimating the radial component of flow from the Doppler velocities and wall motion velocities using the mass conservation equation. Although VFM provides 2-D flow, the algorithm is applicable only to bounded regions. Here, a modified VFM algorithm, vascular VFM, is proposed so that the velocities are estimated regardless of the flow geometry. To validate the algorithm, a phantom mimicking a carotid artery was fabricated and VFM velocities were compared with optical particle image velocimetry (PIV) data acquired in the same imaged plane. The validation results indicate that given optimal beam angle condition, VFM velocitiy is fairly accurate, where the correlation coefficient R between VFM and PIV velocities is 0.95. The standard deviation of the total VFM error, normalized by the maximum velocity, ranged from 8.1% to 16.3%, whereas the standard deviation of the measured input errors ranged from 8.9% to 12.7% for color flow mapping and from 4.5% to 5.9% for subbeam calculation. These results indicate that vascular VFM is reliable as its accuracy is comparable to that of conventional Doppler-flow images.


Subject(s)
Carotid Arteries/physiology , Phantoms, Imaging , Rheology/methods , Ultrasonography, Doppler/methods , Algorithms , Blood Flow Velocity/physiology , Carotid Arteries/diagnostic imaging , Reproducibility of Results
12.
Endocrinology ; 158(9): 2860-2872, 2017 09 01.
Article in English | MEDLINE | ID: mdl-28911167

ABSTRACT

Exposure to a high-fat (HF) diet in utero is associated with increased incidence of cardiovascular disease, diabetes, and metabolic syndrome later in life. However, the molecular basis of this enhanced susceptibility for metabolic disease is poorly understood. Gene expression microarray and genome-wide DNA methylation analyses of mouse liver revealed that exposure to a maternal HF milieu activated genes of immune response, inflammation, and hepatic dysfunction. DNA methylation analysis revealed 3360 differentially methylated loci, most of which (76%) were hypermethylated and distributed preferentially to hotspots on chromosomes 4 [atherosclerosis susceptibility quantitative trait loci (QTLs) 1] and 18 (insulin-dependent susceptibility QTLs 21). Interestingly, we found six differentially methylated genes within these hotspot QTLs associated with metabolic disease that maintain altered gene expression into adulthood (Arhgef19, Epha2, Zbtb17/Miz-1, Camta1 downregulated; and Ccdc11 and Txnl4a upregulated). Most of the hypermethylated genes in these hotspots are associated with cardiovascular system development and function. There were 140 differentially methylated genes that showed a 1.5-fold increase or decrease in messenger RNA levels. Many of these genes play a role in cell signaling pathways associated with metabolic disease. Of these, metalloproteinase 9, whose dysregulation plays a key role in diabetes, obesity, and cardiovascular disease, was upregulated 1.75-fold and hypermethylated in the gene body. In summary, exposure to a maternal HF diet causes DNA hypermethylation, which is associated with long-term gene expression changes in the liver of exposed offspring, potentially contributing to programmed development of metabolic disease later in life.


Subject(s)
DNA Methylation , Diet, High-Fat , Gene Expression Regulation , Liver/metabolism , Maternal Nutritional Physiological Phenomena , Metabolic Syndrome/etiology , Prenatal Exposure Delayed Effects/genetics , Prenatal Exposure Delayed Effects/metabolism , Animals , Body Weight/genetics , Female , Male , Metabolic Syndrome/genetics , Metabolic Syndrome/metabolism , Mice , Pregnancy , Sex Characteristics
13.
Med Sci Sports Exerc ; 38(6): 1088-92, 2006 Jun.
Article in English | MEDLINE | ID: mdl-16775550

ABSTRACT

UNLABELLED: Two recently identified glucose transporters, GLUT8 and GLUT12, are expressed in human skeletal muscle and may be involved in insulin-mediated sugar transport. PURPOSE: The purpose of this study was to measure GLUT8 and GLUT12 mRNA levels in endurance-trained versus sedentary individuals in an effort to determine the effect of repeated days of contractile activity on gene expression. METHODS: GLUT 4, 8, and 12 mRNA were measured in biopsies from the vastus lateralis using quantitative real-time PCR in endurance-trained (N=16, age=22.0+/-0.9 yr, VO(2 max) (L.min(-1))=4.13+/-0.25) and sedentary (N=15, age=21.3+/-0.8 yr, VO(2 max) (L.min(-1))=3.21+/-0.24) subjects. RESULTS: GLUT12 mRNA was lower (40+/-14%, P<0.05) in the exercise-trained compared with the sedentary subjects. There was no difference between groups in GLUT8 mRNA content. mRNA of the insulin-sensitive glucose transporter (GLUT4) was 78+/-27% (P<0.05) higher in skeletal muscle from endurance-trained compared with sedentary individuals. CONCLUSION: These findings suggest an isoform-specific effect on the mRNA of the glucose transporters in human skeletal muscle with repeated days of contractile activity.


Subject(s)
Glucose Transport Proteins, Facilitative/analysis , Muscle, Skeletal/metabolism , Nerve Tissue Proteins/analysis , Physical Endurance/physiology , Adult , Blood Glucose/analysis , Body Mass Index , Exercise Test , Female , Gene Expression Regulation/genetics , Glucose Transport Proteins, Facilitative/genetics , Glucose Transporter Type 4/analysis , Glucose Transporter Type 4/genetics , Humans , Insulin/blood , Male , Muscle Contraction/physiology , Nerve Tissue Proteins/genetics , Oxygen Consumption/physiology , Protein Isoforms/genetics , RNA, Messenger/analysis , Running/physiology
14.
Comp Biochem Physiol B Biochem Mol Biol ; 143(3): 344-50, 2006 Mar.
Article in English | MEDLINE | ID: mdl-16413217

ABSTRACT

To elucidate the precise regulation of glucose homeostasis in chicken skeletal muscle, expression of muscle- and liver-type phosphofructokinase-1 (EC:2.7.1.11, PFK-M, PFK-L) was characterized in the insulin-stimulated state by Real-Time PCR. Firstly, chicken PFK-M and PFK-L full-length cDNA sequences were identified. The deduced amino acid sequences were 81.6% and 86.5% identical with human PFK-M and PFK-L, respectively. In pectoralis superficialis (PS) muscle and extensor digitorum longus (EDL), PFK-M mRNA levels were unchanged following insulin stimulation. Surprisingly, although mammalian PFK-L has been reported to be expressed in liver, kidney and brain, chicken PFK-L was not detected in liver and kidney, however, strong expression was detected in skeletal muscle and brain by Northern blot analysis. However, using PCR, PFK-L mRNA was detected in liver. Taken together, chicken PFK-L mRNA expression was at a very low level, below the detection limit of Northern blot analysis. Chicken PFK-L mRNA levels were increased 200% in PS muscle but decreased by 40% in EDL following insulin stimulation. These results suggest that two types of PFK regulate the glycolytic pathway in the insulin-stimulated state and, therefore, that glucose metabolism in chicken skeletal muscle may be regulated in a very different manner compared to mammals.


Subject(s)
Chickens/metabolism , Glucose/metabolism , Glycolysis , Muscle, Skeletal/enzymology , Phosphofructokinase-1, Liver Type/metabolism , Phosphofructokinase-1, Muscle Type/metabolism , Amino Acid Sequence , Animals , Cloning, Molecular , Gene Expression , Glycolysis/genetics , Insulin/pharmacology , Liver/chemistry , Molecular Sequence Data , Muscle, Skeletal/chemistry , Muscle, Skeletal/drug effects , Phosphofructokinase-1, Liver Type/genetics , Phosphofructokinase-1, Muscle Type/genetics , RNA, Messenger/analysis , RNA, Messenger/metabolism
15.
J Nutr Biochem ; 27: 79-95, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26423886

ABSTRACT

The liver is a critical organ for regulation of energy homeostasis and fatty liver disease is closely associated with obesity and insulin resistance. We have previously found that lingonberries, blackcurrants and bilberries prevent, whereas açai berries exacerbate, the development of hepatic steatosis and obesity in the high-fat (HF)-fed C57BL/6J mouse model. In this follow-up study, we investigated the mechanisms behind these effects. Genome-wide hepatic gene expression profiling indicates that the protective effects of lingonberries and bilberries are accounted for by several-fold downregulation of genes involved in acute-phase and inflammatory pathways (e.g. Saa1, Cxcl1, Lcn2). In contrast, açai-fed mice exhibit marked upregulation of genes associated with steatosis (e.g. Cfd, Cidea, Crat) and lipid and cholesterol biosynthesis, which is in line with the exacerbation of HF-induced hepatic steatosis in these mice. In silico transcription factor analysis together with immunoblot analysis identified NF-κB, STAT3 and mTOR as upstream regulators involved in mediating the observed transcriptional effects. To gain further insight into mechanisms involved in the gene expression changes, the HELP-tagging assay was used to identify differentially methylated CpG sites. Compared to the HF control group, lingonberries induced genome-wide hypermethylation and specific hypermethylation of Ncor2, encoding the corepressor NCoR/SMRT implicated in the regulation of pathways of metabolic homeostasis and inflammation. We conclude that the beneficial metabolic effects of lingonberries and bilberries are associated with downregulation of inflammatory pathways, whereas for blackcurrants, exerting similar metabolic effects, different mechanisms of action appear to dominate. NF-κB, STAT3 and mTOR are potential targets of the health-promoting effects of berries.


Subject(s)
DNA Methylation , Diet, High-Fat , Diet , Fruit , Gene Expression , Liver/metabolism , Animals , Insulin Resistance , Male , Mice , Mice, Inbred C57BL
16.
Article in English | MEDLINE | ID: mdl-16087376

ABSTRACT

To elucidate the specificity of glucose metabolism in chicken skeletal muscle, changes in mRNA levels of hexokinase I (HKI), hexokinase II (HKII), phosphofructokinase-1 (PFK-1) and glycogen synthase (GS) were characterized in acute and persistent hypoglycemia induced by tolbutamide administration. In acute hypoglycemia, induced by a single dose of tolbutamide (100 mg/kg body mass), HKII, PFK-1 and GS mRNA levels remained unchanged; however, levels of HKI mRNA and glucose transporter 1 (GLUT1) were significantly increased 4 h after administration. In persistent hypoglycemia, induced by sequential administration of tolbutamide (100 mg/kg body mass) 3 times a day for 5 days, GS mRNA was significantly increased at day 5, while HKI, HKII and PFK-1 mRNA levels remained unchanged. These results suggest that HKI is responsible for glucose transport into skeletal muscle in acute hypoglycemia and that glucose preferentially enters the glycogenic pathway before the glycolytic pathway in persistently hypoglycemic chickens.


Subject(s)
Glycogen Synthase/metabolism , Hexokinase/metabolism , Hypoglycemia/metabolism , Muscle, Skeletal/metabolism , Phosphofructokinase-1/metabolism , RNA, Messenger/metabolism , Tolbutamide/pharmacology , Amino Acid Sequence , Animals , Chickens , DNA, Complementary/metabolism , Glycogen Synthase/genetics , Hexokinase/genetics , Hypoglycemia/chemically induced , Molecular Sequence Data , Muscle, Skeletal/chemistry , Muscle, Skeletal/enzymology , Phosphofructokinase-1/genetics , Sequence Alignment , Sequence Homology, Amino Acid
17.
Physiol Rep ; 3(2)2015 Feb 01.
Article in English | MEDLINE | ID: mdl-25677552

ABSTRACT

Previous studies have shown that expression of GLUT4 is decreased in arterial smooth muscle of hypertensive rats and mice and that total body overexpression of GLUT4 in mice prevents enhanced arterial reactivity in hypertension. To demonstrate that the effect of GLUT4 overexpression on vascular responses is dependent on vascular smooth muscle GLUT4 rather than on some systemic effect we developed and tested smooth-muscle-specific GLUT4 transgenic mice (SMG4). When made hypertensive with angiotensin II, both wild-type and SMG4 mice exhibited similarly increased systolic blood pressure. Responsiveness to phenylephrine, serotonin, and prostaglandin F2α was significantly increased in endothelium-intact aortic rings from hypertensive wild-type mice but not in aortae of SMG4 mice. Inhibition of Rho-kinase equally reduced serotonin-stimulated contractility in aortae of hypertensive wild-type and SMG4-mice. In addition, acetylcholine-stimulated relaxation was significantly decreased in aortic rings of hypertensive wild-type mice, but not in rings of SMG4 mice. Inhibition of either prostacylin receptors or cyclooxygenase-2 reduced relaxation in rings of hypertensive SMG4 mice. Inhibition of cyclooxygenase-2 had no effect on relaxation in rings of hypertensive wild-type mice. Cyclooxygenase-2 protein expression was decreased in hypertensive wild-type aortae but not in hypertensive SMG4 aortae compared to nonhypertensive controls. Our results demonstrate that smooth muscle expression of GLUT4 exerts a major effect on smooth muscle contractile responses and endothelium-dependent vasorelaxation and that normal expression of GLUT4 in vascular smooth muscle is required for appropriate smooth muscle and endothelial responses.

18.
PLoS One ; 10(6): e0131735, 2015.
Article in English | MEDLINE | ID: mdl-26121580

ABSTRACT

Inhibiting the synthesis of endogenous prostaglandins with nonsteroidal anti-inflammatory drugs exacerbates arterial hypertension. We hypothesized that the converse, i.e., raising the level of endogenous prostaglandins, might have anti-hypertensive effects. To accomplish this, we focused on inhibiting the prostaglandin transporter PGT (SLCO2A1), which is the obligatory first step in the inactivation of several common PGs. We first examined the role of PGT in controlling arterial blood pressure blood pressure using anesthetized rats. The high-affinity PGT inhibitor T26A sensitized the ability of exogenous PGE2 to lower blood pressure, confirming both inhibition of PGT by T26A and the vasodepressor action of PGE2 T26A administered alone to anesthetized rats dose-dependently lowered blood pressure, and did so to a greater degree in spontaneously hypertensive rats than in Wistar-Kyoto control rats. In mice, T26A added chronically to the drinking water increased the urinary excretion and plasma concentration of PGE2 over several days, confirming that T26A is orally active in antagonizing PGT. T26A given orally to hypertensive mice normalized blood pressure. T26A increased urinary sodium excretion in mice and, when added to the medium bathing isolated mouse aortas, T26A increased the net release of PGE2 induced by arachidonic acid, inhibited serotonin-induced vasoconstriction, and potentiated vasodilation induced by exogenous PGE2. We conclude that pharmacologically inhibiting PGT-mediated prostaglandin metabolism lowers blood pressure, probably by prostaglandin-induced natriuresis and vasodilation. PGT is a novel therapeutic target for treating hypertension.


Subject(s)
Blood Pressure/drug effects , Hypertension/metabolism , Hypertension/physiopathology , Organic Anion Transporters/antagonists & inhibitors , Prostaglandins/metabolism , Animals , Disease Models, Animal , Hypertension/drug therapy , Mice , Organic Anion Transporters/metabolism , Rats , Sodium/metabolism , Sodium/urine , Thromboxanes/metabolism , Triazines/administration & dosage , Triazines/pharmacology , Vasodilation/drug effects , para-Aminobenzoates/administration & dosage , para-Aminobenzoates/pharmacology
19.
FEBS Lett ; 529(2-3): 313-8, 2002 Oct 09.
Article in English | MEDLINE | ID: mdl-12372620

ABSTRACT

Although bird species studied thus far have no distinct brown adipose tissue (BAT) or a related thermogenic tissue, there is now strong evidence that non-shivering mechanisms in birds may play an important role during cold exposure. Recently, increased expression of the duckling homolog of the avian uncoupling protein (avUCP) was demonstrated in cold-acclimated ducklings [Raimbault et al., Biochem. J. 353 (2001) 441-444]. Among the mitochondrial anion carriers, roles for the ATP/ADP antiporter (ANT) as well as UCP variants in thermogenesis are proposed. The present experiments were conducted (i) to examine the effects of cold acclimation on the fatty acid-induced uncoupling of oxidative phosphorylation in skeletal muscle mitochondria and (ii) to clone the cDNA of UCP and ANT homologs from chicken skeletal muscle and study differences compared to controls in expression levels of their mRNAs in the skeletal muscle of cold-acclimated chickens. The results obtained here show that suppression of palmitate-induced uncoupling by carboxyatractylate was greater in the subsarcolemmal skeletal muscle mitochondria from cold-acclimated chickens than that for control birds. An increase in mRNA levels of avANT and, to lesser degree, of avUCP in the skeletal muscle of cold-acclimated chickens was also found. Taken together, the present studies on cold-acclimated chickens suggest that the simultaneous increments in levels of avANT and avUCP mRNA expression may be involved in the regulation of thermogenesis in skeletal muscle.


Subject(s)
Carrier Proteins/genetics , Cold Temperature , Membrane Proteins/genetics , Mitochondrial ADP, ATP Translocases/genetics , Muscle, Skeletal/metabolism , Animals , Base Sequence , Chickens , DNA Primers , Ion Channels , Mitochondrial Proteins , Uncoupling Protein 1
20.
J Endocrinol ; 222(2): 217-27, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24895417

ABSTRACT

Intrauterine (IU) malnutrition could alter pancreatic development. In this study, we describe the effects of high-fat diet (HFD) during pregnancy on fetal growth and pancreatic morphology in an 'at risk' animal model of metabolic disease, the glucose transporter 4 (GLUT4) heterozygous mouse (G4+/-). WT female mice mated with G4+/- males were fed HFD or control diet (CD) for 2 weeks before mating and throughout pregnancy. At embryonic day 18.5, fetuses were killed and pancreata isolated for analysis of morphology and expression of genes involved in insulin (INS) cell development, proliferation, apoptosis, glucose transport and function. Compared with WT CD, WT HFD fetal pancreata had a 2.4-fold increase in the number of glucagon (GLU) cells (P=0.023). HFD also increased GLU cell size by 18% in WT pancreata compared with WT CD. Compared with WT CD, G4+/- CD had an increased number of INS cells and decreased INS and GLU cell size. Compared with G4+/- CD, G4+/- HFD fetuses had increased pancreatic gene expression of Igf2, a mitogen and inhibitor of apoptosis. The expression of genes involved in proliferation, apoptosis, glucose transport, and INS secretion was not altered in WT HFD compared with G4+/- HFD pancreata. In contrast to WT HFD pancreata, HFD exposure did not alter pancreatic islet morphology in fetuses with GLUT4 haploinsufficiency; this may be mediated in part by increased Igf2 expression. Thus, interactions between IU diet and fetal genetics may play a critical role in the developmental origins of health and disease.


Subject(s)
Diet, High-Fat/adverse effects , Glucose Transporter Type 4/genetics , Pancreas/embryology , Animals , Female , Fetal Development , Glucagon/metabolism , Insulin-Like Growth Factor II/biosynthesis , Insulin-Secreting Cells/physiology , Male , Mice , Pancreas/metabolism , Pregnancy , Prenatal Exposure Delayed Effects
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