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1.
Int J Mol Sci ; 24(18)2023 Sep 19.
Article in English | MEDLINE | ID: mdl-37762596

ABSTRACT

Mitochondria are crucial for cellular energy metabolism and are involved in signaling, aging, and cell death. They undergo dynamic changes through fusion and fission to adapt to different cellular states. In this study, we investigated the effect of knocking out the dynamin 1-like protein (Dnm1l) gene, a key regulator of mitochondrial fission, in neural stem cells (NSCs) differentiated from Dnm1l knockout embryonic stem cells (Dnm1l-/- ESCs). Dnm1l-/- ESC-derived NSCs (Dnm1l-/- NSCs) exhibited similar morphology and NSC marker expression (Sox2, Nestin, and Pax6) to brain-derived NSCs, but lower Nestin and Pax6 expression than both wild-type ESC-derived NSCs (WT-NSCs) and brain-derived NSCs. In addition, compared with WT-NSCs, Dnm1l-/- NSCs exhibited distinct mitochondrial morphology and function, contained more elongated mitochondria, showed reduced mitochondrial respiratory capacity, and showed a metabolic shift toward glycolysis for ATP production. Notably, Dnm1l-/- NSCs exhibited impaired self-renewal ability and accelerated cellular aging during prolonged culture, resulting in decreased proliferation and cell death. Furthermore, Dnm1l-/- NSCs showed elevated levels of inflammation and cell stress markers, suggesting a connection between Dnm1l deficiency and premature aging in NSCs. Therefore, the compromised self-renewal ability and accelerated cellular aging of Dnm1l-/- NSCs may be attributed to mitochondrial fission defects.


Subject(s)
Cellular Senescence , Mitochondria , Nestin , Mitochondria/genetics , Embryonic Stem Cells
2.
Clin Infect Dis ; 71(9): e487-e496, 2020 12 03.
Article in English | MEDLINE | ID: mdl-31994704

ABSTRACT

BACKGROUND: Clinically relevant categorization of antimicrobial resistance is critical to mitigating the threat it poses. Difficult-to-treat resistance (DTR) is a recently proposed category defined as nonsusceptibility to all first-line antibiotic agents. METHODS: A retrospective study was conducted with nonduplicate cases of gram-negative bloodstream infection (GNBSI) caused by 4 major taxa (Escherichia coli, Klebsiella pneumoniae, Pseudomonas aeruginosa, and Acinetobacter species) identified from a nationwide surveillance database. DTR was defined as nonsusceptibility to all the ß-lactams and fluoroquinolones tested. Patient characteristics and mortality were compared between DTR GNBSI and GNBSI caused by carbapenem-resistant but not DTR and extended-spectrum cephalosporin-resistant but not DTR isolates using Centers for Disease Control and Prevention definitions. Adjusted odds ratios (aORs) for 30-day in-hospital mortality were examined for DTR in overall and in propensity score-matched cohorts. RESULTS: A total of 1167 episodes of monomicrobial GNBSI were identified, and 147 (12.6%) of the isolates were DTR. The majority of DTR isolates were Acinetobacter species (79.6%) and P. aeruginosa (17.7%). DTR infections were associated with previous antibiotic use, healthcare contact, ventilator use, and lower respiratory tract infection. Crude mortality for GNBSI caused by DTR was 50.3%. A multivariable model showed that only DTR, but not other categories, was significantly associated with mortality (adjusted odds ratio [aOR], 3.58 [95% confidence interval {CI}, 1.27-10.19]). DTR was also a significant predictor for mortality in the analysis of propensity score-matched cohorts (aOR, 3.48 [95% CI, 1.82-6.79]). CONCLUSIONS: In patients with GNBSI, DTR was associated with higher mortality than those in other resistance categories. Our findings suggest that DTR could be useful for surveillance and prognostication.


Subject(s)
Bacteremia , Gram-Negative Bacterial Infections , Anti-Bacterial Agents/therapeutic use , Bacteremia/drug therapy , Bacteremia/epidemiology , Carbapenems , Drug Resistance, Bacterial , Fluoroquinolones , Gram-Negative Bacteria , Gram-Negative Bacterial Infections/drug therapy , Gram-Negative Bacterial Infections/epidemiology , Humans , Microbial Sensitivity Tests , Retrospective Studies
3.
J Biomed Sci ; 27(1): 8, 2020 Jan 03.
Article in English | MEDLINE | ID: mdl-31900177

ABSTRACT

BACKGROUND: Bacterial isolates with multiple plasmids harbouring different carbapenemase genes have emerged and been identified repeatedly, despite a general notion that plasmids confer fitness cost in bacterial host. In this study, we investigated the effects of plasmids with carbapenemase genes on the fitness and virulence of bacteria. METHODS: Different plasmids harbouring the carbapenemase genes, blaNDM-1 and blaOXA-232, were isolated from a carbapenem-resistant K. pneumoniae strain. Each plasmid was conjugated into the Escherichia coli strain DH5α, and a transconjugant with both plasmids was also obtained by transformation. Their in vitro competitive ability, biofilm formation, serum resistance, survival ability within macrophage and fruit fly, and fly killing ability were evaluated. RESULTS: The transconjugants with a single plasmid showed identical phenotypes to the plasmid-free strain, except that they decreased fly survival after infection. However, significantly increased fitness, virulence and biofilm production were observed consistently for the transconjugant with both plasmids, harbouring blaNDM-1 and blaOXA-232. CONCLUSIONS: Our data indicate that bacteria carrying multiple plasmids encoding different carbapenemases may have increased fitness and virulence, emphasizing the need for diverse strategies to combat antimicrobial resistance.


Subject(s)
Bacterial Infections/genetics , Bacterial Proteins/genetics , Plasmids/genetics , beta-Lactamases/genetics , Bacterial Infections/microbiology , Biofilms/growth & development , Escherichia coli/genetics , Escherichia coli/pathogenicity , Genetic Fitness/genetics , Humans , Klebsiella pneumoniae/genetics , Klebsiella pneumoniae/pathogenicity , Transformation, Bacterial/genetics , Virulence/genetics
4.
Int J Med Microbiol ; 309(3-4): 194-198, 2019.
Article in English | MEDLINE | ID: mdl-30885571

ABSTRACT

We obtained nine Klebsiella pneumoniae isolates successively isolated from a single patient. Four pairs (M1-M4 and NM1-NM4) obtained simultaneously from the same site showed different colony types, mucoid and non-mucoid, while the final isolate (M5) was isolated alone from the blood and showed a mucoid phenotype. The whole genome of isolate M5 was sequenced de novo using the PacBio RSII system, while the others were sequenced with an Illumina Hiseq4000 and mapped to the genome sequences of M5. To identify insertions or deletions in the cps locus, we amplified and sequenced cps locus genes. We identified insertion sequence (IS) elements in several genes of the cps locus or one amino acid substitution in WcaJ in all non-mucoid isolates. Five additional amino acid alterations in RpsJ, LolE, Lon-2, PpsE, and a hypothetical protein were detected in some mucoid and non-mucoid isolates. Based on the genome data and cps locus sequences, the mucoid phenotype may have been lost or converted into the non-mucoid phenotype because of the insertion of IS elements or amino acid alterations at this locus. We inferred a within-host evolutionary scenario, in which non-mucoid variants emerged repeatedly from mucoid isolates, but may be short-lived because of their low fitness.


Subject(s)
Bacterial Capsules/metabolism , Klebsiella Infections/microbiology , Klebsiella pneumoniae/metabolism , Bacterial Capsules/genetics , Bacterial Proteins/genetics , Biological Evolution , DNA, Bacterial/genetics , Genome, Bacterial/genetics , Humans , Klebsiella pneumoniae/genetics , Male , Middle Aged , Mutation , Phenotype , Polysaccharides, Bacterial/genetics
5.
Plasmid ; 104: 102417, 2019 07.
Article in English | MEDLINE | ID: mdl-31150689

ABSTRACT

Recently, Escherichia coli isolates co-producing New Delhi metallo-ß-lactamase (NDM)-5 and oxacillinase (OXA)-181 were identified in a tertiary-care hospital of South Korea. Isolate CC1702-1 was collected from urine in January 2017 and isolate CC1706-1 was recovered from a transtracheal aspirate of a hospitalized patient in May 2017. Carbapenemase genes were identified by multiplex PCR and sequencing, and whole genome sequencing was performed subsequently using the PacBio RSII system. Both E. coli isolates belonged to the same clone (ST410) and were resistant to all ß-lactams including carbapenems. We obtained whole plasmid sequences of the isolates: pCC1702-NDM-5 from CC1702-1 and pCC1706-NDM-5 and pCC1706-OXA-181 from CC1706-1. The two E. coli isolates belonged to the same clone (ST410) and they were completely resistant to all ß-lactams, as well as carbapenems. Two blaNDM-5-harboring plasmids belonged to the same incompatibility group, IncFIA/B, and consisted of 79,613 bp and 111,890 bp with 87 and 130 coding sequences, respectively. The genetic structures of the two blaNDM-5-bearing plasmids, which were distinct from the blaNDM-5-bearing plasmids from the Klebsiella pneumoniae isolates previously transmitted from the United Arab Emirates (UAE) to South Korea, differed from each other. While pCC1702-NDM-5 showed high degree of identity with the plasmid from a multidrug-resistant isolate of Citrobacter fruendii P5571 found in China, pCC1706-NDM-5 was very similar to the plasmid from a multidrug-resistant isolate of E. coli AMA1176 found in Denmark. pCC1706-OXA-181, which was a 51 kb, self-transmissible IncX3 plasmid, was identical to the E. coli plasmids pAMA1167-OXA-181 from Denmark and pOXA-181-WCHEC14828 from China. Plasmids harboring blaNDM-5 in E. coli isolates might not be transferred from K. pneumoniae isolates co-producing NDM-5 and OXA-181. They probably originated from multiple sources.


Subject(s)
Escherichia coli Infections/epidemiology , Escherichia coli Infections/microbiology , Escherichia coli Proteins/genetics , Escherichia coli/genetics , Plasmids/genetics , beta-Lactamases/genetics , Anti-Bacterial Agents/pharmacology , Conjugation, Genetic , Escherichia coli/drug effects , Escherichia coli/isolation & purification , Escherichia coli Infections/drug therapy , Escherichia coli Proteins/biosynthesis , Genotype , Humans , Microbial Sensitivity Tests , Republic of Korea/epidemiology , beta-Lactamases/biosynthesis
6.
Microbiol Immunol ; 63(6): 206-212, 2019 Jun.
Article in English | MEDLINE | ID: mdl-31081554

ABSTRACT

In this study, the whole genome sequences of two Streptococcus pneumoniae clinical isolates from South Korea were determined and compared. They were found to be the same serotype (11 A) and multilocus sequence typing analysis showed that they are single-locus variants (SLVs; ST8279 and ST166) of each other, differing at one allele (aroE). However, the ST8279 strain is extensively drug-resistant (XDR) whereas the ST166 strain is not. The genome of the XDR strain is very similar in structure to that of two previously reported genomes, AP200 (11 A:ST62) and 70585 (5:ST5803); however, some regions were inverted and there were some exogenous regions in the ST8279 strain. It was found that 6,502 single nucleotide polymorphisms are dispersed across the genome between the two serotype 11 A ST8279 and ST166 strains. Many of them are located in genes associated with antibiotic resistance. In addition, many amino acid differences were also identified in genes involved in DNA repair (mutL, uvrA and uvrC) and recombination (recU, recR and recA). On the basis of these results, it was inferred that the XDR strain did not evolve from its SLV via a single recombination event involving a large portion of the genome including the aroE gene. Rather, the strain likely evolved through many point mutations and recombination events involving small portions of the genome.


Subject(s)
Drug Resistance, Multiple, Bacterial/genetics , Pneumococcal Infections/microbiology , Serogroup , Streptococcus pneumoniae/genetics , DNA, Bacterial/genetics , Genes, Bacterial/genetics , Genome, Bacterial , Genotyping Techniques , Humans , Microbial Sensitivity Tests , Multilocus Sequence Typing , Polymorphism, Single Nucleotide , Republic of Korea , Sequence Alignment , Serotyping , Streptococcus pneumoniae/classification , Streptococcus pneumoniae/drug effects , Streptococcus pneumoniae/isolation & purification , Whole Genome Sequencing
7.
J Korean Med Sci ; 34(2): e17, 2019 Jan 14.
Article in English | MEDLINE | ID: mdl-30636947

ABSTRACT

We implemented a carbapenem-saving strategy in hemato-oncology patients from 2013, using an empirical combination of piperacillin-tazobactam and amikacin for high-risk hemato-oncology patients with febrile neutropenia, who remain hemodynamically unstable > 72 hours despite initial cefepime treatment. All-cause mortality was not different between the two periods (6.54 and 6.57 deaths per 1,000 person-day, P = 0.926). Group 2 carbapenem use significantly decreased after strategy implementation (78.43 vs. 67.43 monthly days of therapy, P = 0.018), while carbapenem-resistant gram-negative bacilli did not show meaningful changes during the study period. Our carbapenem-saving strategy could effectively suppress carbapenem use without an increase of overall mortality.


Subject(s)
Amikacin/therapeutic use , Carbapenems/therapeutic use , Febrile Neutropenia/drug therapy , Piperacillin, Tazobactam Drug Combination/therapeutic use , Amikacin/pharmacology , Anti-Bacterial Agents/therapeutic use , Carbapenems/pharmacology , Drug Resistance, Bacterial , Enterobacteriaceae/drug effects , Febrile Neutropenia/microbiology , Febrile Neutropenia/pathology , Humans , Piperacillin, Tazobactam Drug Combination/pharmacology
9.
Article in English | MEDLINE | ID: mdl-29133568

ABSTRACT

Although carbapenems are effective for treating serious multidrug-resistant Pseudomonas aeruginosa infections, carbapenem-resistant P. aeruginosa (CRPA) is now being reported worldwide. Ceftolozane-tazobactam (C/T) demonstrates activity against many multidrug-resistant isolates. We evaluated the activity of C/T and compared its activity to that of ceftazidime-avibactam (C/A) using a well-characterized collection of non-carbapenemase-producing CRPA isolates. Forty-two non-carbapenemase-producing CRPA isolates from a previous study (J. Y. Lee and K. S. Ko, Int J Antimicrob Agents 40:168-172, 2012, https://doi.org/10.1016/j.ijantimicag.2012.04.004) were included. All had been previously shown to be negative for blaIMP, blaVIM, blaSPM, blaGIM, blaSIM, and blaKPC by PCR. In the prior study, expression of oprD, ampC, and several efflux pump genes had been defined by quantitative reverse transcription-PCR. Here, antimicrobial susceptibility was determined by broth microdilution according to Clinical and Laboratory Standards Institute (CLSI) guidelines. Time-kill curve assays were performed using three C/T- and C/A-susceptible CRPA isolates. Among 42 non-carbapenemase-producing CRPA isolates, overall susceptibility to C/T was 95.2%, compared to 71.4%, 42.9%, 23.8%, 21.4%, and 2.4% for C/A, ceftazidime, piperacillin-tazobactam, cefepime, and meropenem, respectively. The C/T resistance rate was significantly lower than that of C/A among isolates showing decreased oprD and increased mexB expression (5.1% versus 25.6%, P = 0.025, and 4.3% versus 34.8%, P = 0.022, respectively). In time-kill curve studies, C/T was less bactericidal than C/A against an isolate with decreased oprD and increased ampC expression. C/T was active against 95.2% of non-carbapenemase-producing CRPA clinical isolates. No apparent correlation of C/T MIC values with specific mutation-driven resistance mechanisms was noted.


Subject(s)
Bacterial Proteins/metabolism , Carbapenems/pharmacology , Cephalosporins/pharmacology , Drug Resistance, Multiple, Bacterial/drug effects , Pseudomonas aeruginosa/drug effects , Tazobactam/pharmacology , beta-Lactamases/metabolism , Anti-Bacterial Agents/pharmacology , Azabicyclo Compounds/pharmacology , Ceftazidime/pharmacology , Cross Infection/drug therapy , Cross Infection/microbiology , Drug Combinations , Humans , Microbial Sensitivity Tests/methods , Pseudomonas Infections/drug therapy , Pseudomonas Infections/microbiology , Pseudomonas aeruginosa/metabolism
10.
Int J Med Microbiol ; 308(8): 986-989, 2018 Dec.
Article in English | MEDLINE | ID: mdl-30143394

ABSTRACT

Recently, we have identified an extensively drug-resistant (XDR) Streptococcus pneumoniae serotype 15A isolate from a patient with bacterial meningitis. It belonged to sequence type 8279 (ST8279), a clone identified as XDR serotype 11A isolated in South Korea. We obtained and compared the genome sequences of an XDR 15A and an XDR 11A isolate. The genomes of two XDR isolates were highly identical, except for the capsular polysaccharide (cps) locus and another small region. Capsular switching from 11A to 15A may have occurred via recombination of the cps locus. The emergence of a new XDR clone via capsular switching would be a great concern for public health and in clinical settings.


Subject(s)
Arthritis, Infectious/microbiology , Bacterial Capsules/genetics , Communicable Diseases, Emerging/microbiology , Drug Resistance, Multiple, Bacterial/genetics , Meningitis, Pneumococcal/microbiology , Shoulder/microbiology , Streptococcus pneumoniae/genetics , Aged , Arthritis, Infectious/blood , Female , Genome, Bacterial/genetics , Humans , Meningitis, Pneumococcal/blood , Recombination, Genetic , Republic of Korea , Serogroup , Spondylitis/blood , Spondylitis/microbiology , Streptococcus pneumoniae/isolation & purification , Whole Genome Sequencing
11.
Ann Hematol ; 97(2): 343-350, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29138886

ABSTRACT

Stenotrophomonas maltophilia (SM) has emerged as an important nosocomial pathogen with high morbidity and mortality. Because of its unique antimicrobial susceptibility pattern, appropriate antimicrobial therapy for SM bacteremia is still challenging, especially in immunocompromised patients. The present study was performed to assess clinical predictors of SM bacteremia in adult patients with hematologic malignancy. From 2006 through 2016, a case-control study was performed at a tertiary-care hospital. Case patients were defined as SM bacteremia in patients with hematologic malignancy. Date- and location-matched controls were selected from among patients with gram-negative bacteremia (GNB) other than SM. A total of 118 cases of SM bacteremia were identified and compared to 118 controls. While pneumonia was the most common source of SM bacteremia, centralline-associated infection was most common in the controls. The overall 30-day mortality rate of cases with SM bacteremia was significantly higher than that of the controls (61.0 and 32.2%, respectively; P < 0.001). A multivariable analysis showed that polymicrobial infection, previous SM isolation, the number of antibiotics previously used ≥ 3, and breakthrough bacteremia during carbapenem therapy were significantly associated with SM bacteremia (all P < 0.01). Previous use of trimethoprim/sulfamethoxazole (TMP/SMX) was negatively association with SM bacteremia (P = 0.002). Our data suggest that SM is becoming a significant pathogen in patients with hematologic malignancy. Several clinical predictors of SM bacteremia can be used for appropriate antimicrobial therapy in hematologic patients with suspected GNB.


Subject(s)
Cross Infection/diagnosis , Gram-Negative Bacterial Infections/diagnosis , Hematologic Neoplasms/diagnosis , Immunocompromised Host , Pneumonia/diagnosis , Stenotrophomonas maltophilia/immunology , Adult , Aged , Anti-Bacterial Agents/therapeutic use , Carbapenems/therapeutic use , Case-Control Studies , Cross Infection/immunology , Cross Infection/microbiology , Cross Infection/mortality , Female , Gram-Negative Bacterial Infections/drug therapy , Gram-Negative Bacterial Infections/immunology , Gram-Negative Bacterial Infections/mortality , Hematologic Neoplasms/immunology , Hematologic Neoplasms/microbiology , Hematologic Neoplasms/mortality , Humans , Male , Middle Aged , Multivariate Analysis , Pneumonia/drug therapy , Pneumonia/immunology , Pneumonia/mortality , Prognosis , Survival Analysis , Tertiary Care Centers , Trimethoprim, Sulfamethoxazole Drug Combination/therapeutic use
12.
Eur J Clin Microbiol Infect Dis ; 37(8): 1547-1552, 2018 Aug.
Article in English | MEDLINE | ID: mdl-29777487

ABSTRACT

To evaluate the effects of demographic and perceptive factors on the knowledge, perception, and behavior regarding antibiotic use in the general public, we conducted three serial telephone interview surveys in 2010, 2012, and 2015. Computer-aided telephone interview was conducted, with a predetermined quota stratified by sex, age, and geographic location. Respondents who answered correctly to four or more questions were categorized as having better knowledge. A total of 3013 respondents participated. Better knowledge was associated with age < 60 years (OR 1.37, 95% CI 1.04-1.82), college education (OR 1.57, 95% CI 1.26-1.97), healthcare-related occupation or education (OR 2.26, 95% CI 1.52-3.36), and media exposure (OR 1.25, 95% CI 1.02-1.54). In contrast, correct antibiotic use behavior was associated with male sex (OR 1.48, 95% CI 1.27-1.73), older age (OR 1.63, 95% CI 1.34-1.99), and being married (OR 1.26, 95% CI 1.04-1.52), along with better knowledge (OR 1.43, 95% CI 1.19-1.71). However, multifaceted analysis indicated that better knowledge was associated with correct behavior in all subgroups. Other demographic factors were associated only in respondents with poor knowledge. Various factors other than knowledge on antibiotics, many of them traditionally underappreciated, affect antibiotic use behavior.


Subject(s)
Anti-Bacterial Agents/therapeutic use , Antimicrobial Stewardship , Health Knowledge, Attitudes, Practice , Public Opinion , Adult , Aged , Aged, 80 and over , Drug Resistance, Bacterial , Factor Analysis, Statistical , Female , Humans , Male , Middle Aged , Perception , Public Health Surveillance , Surveys and Questionnaires , Young Adult
13.
J Infect Chemother ; 24(2): 150-152, 2018 Feb.
Article in English | MEDLINE | ID: mdl-29223614

ABSTRACT

To evaluate host susceptibility factors to Middle East respiratory syndrome coronavirus (MERS-CoV) infection, we conducted a retrospective cohort study from the single largest exposure event of the 2015 Korean MERS outbreak. A total of 175 patients were closely exposed to a super-spreader, 26 of which were infected (14.9%). In a multivariate analysis, history of autologous stem cell transplantation (HR, 31.151; 95% CI, 5.447-178.145; P < 0.001) and tachypnea at ED (HR, 4.392; 95% CI, 1.402-13.761; P = 0.011) were significantly associated with MERS-CoV infection.


Subject(s)
Coronavirus Infections/epidemiology , Coronavirus Infections/virology , Disease Outbreaks , Host-Pathogen Interactions , Middle East Respiratory Syndrome Coronavirus/isolation & purification , Adult , Aged , Cohort Studies , Disease Susceptibility/epidemiology , Disease Susceptibility/virology , Female , Humans , Male , Middle Aged , Multivariate Analysis , Republic of Korea/epidemiology , Retrospective Studies , Risk Factors , Stem Cell Transplantation , Tachypnea/epidemiology , Tachypnea/virology , Transplantation, Autologous
14.
Article in English | MEDLINE | ID: mdl-28373200

ABSTRACT

We studied the resistance mechanism and antimicrobial effects of ß-lactams on imipenem-resistant Pseudomonas aeruginosa isolates that were susceptible to ceftazidime as detected by time-kill curve methods. Among 215 P. aeruginosa isolates from hospitalized patients in eight hospitals in the Republic of Korea, 18 isolates (23.4% of 77 imipenem-resistant isolates) were imipenem resistant and ceftazidime susceptible. Multilocus sequence typing revealed diverse genotypes, which indicated independent emergence. These 18 isolates were negative for carbapenemase genes. All 18 imipenem-resistant ceftazidime-susceptible isolates showed decreased mRNA expression of oprD, and overexpression of mexB was observed in 13 isolates. In contrast, overexpression of ampC, mexD, mexF, or mexY was rarely found. Time-kill curve methods were applied to three selected imipenem-resistant ceftazidime-susceptible isolates at a standard inoculum (5 × 105 CFU/ml) or at a high inoculum (5 × 107 CFU/ml) to evaluate the antimicrobial effects of ß-lactams. Inoculum effects were detected for all three ß-lactam antibiotics, ceftazidime, cefepime, and piperacillin-tazobactam, against all three isolates. The antibiotics had significant killing effects in the standard inoculum, but no effects in the high inoculum were observed. Our results suggest that ß-lactam antibiotics should be used with caution in patients with imipenem-resistant ceftazidime-susceptible P. aeruginosa infection, especially in high-inoculum infections such as endocarditis and osteomyelitis.


Subject(s)
Anti-Bacterial Agents/pharmacology , Ceftazidime/pharmacology , Imipenem/pharmacology , Pseudomonas aeruginosa/drug effects , Pseudomonas aeruginosa/genetics , Bacterial Outer Membrane Proteins/genetics , Bacterial Proteins/genetics , Cefepime , Cephalosporins/pharmacology , Drug Resistance, Bacterial , Humans , Membrane Proteins/genetics , Membrane Transport Proteins/genetics , Microbial Sensitivity Tests , Multilocus Sequence Typing , Penicillanic Acid/analogs & derivatives , Penicillanic Acid/pharmacology , Piperacillin/pharmacology , Piperacillin, Tazobactam Drug Combination , Porins/genetics , Pseudomonas Infections/microbiology , Pseudomonas aeruginosa/isolation & purification , beta-Lactamases/genetics
15.
Lancet ; 388(10048): 994-1001, 2016 Sep 03.
Article in English | MEDLINE | ID: mdl-27402381

ABSTRACT

BACKGROUND: In 2015, a large outbreak of Middle East respiratory syndrome coronavirus (MERS-CoV) infection occurred following a single patient exposure in an emergency room at the Samsung Medical Center, a tertiary-care hospital in Seoul, South Korea. We aimed to investigate the epidemiology of MERS-CoV outbreak in our hospital. METHODS: We identified all patients and health-care workers who had been in the emergency room with the index case between May 27 and May 29, 2015. Patients were categorised on the basis of their exposure in the emergency room: in the same zone as the index case (group A), in different zones except for overlap at the registration area or the radiology suite (group B), and in different zones (group C). We documented cases of MERS-CoV infection, confirmed by real-time PCR testing of sputum samples. We analysed attack rates, incubation periods of the virus, and risk factors for transmission. FINDINGS: 675 patients and 218 health-care workers were identified as contacts. MERS-CoV infection was confirmed in 82 individuals (33 patients, eight health-care workers, and 41 visitors). The attack rate was highest in group A (20% [23/117] vs 5% [3/58] in group B vs 1% [4/500] in group C; p<0·0001), and was 2% (5/218) in health-care workers. After excluding nine cases (because of inability to determine the date of symptom onset in six cases and lack of data from three visitors), the median incubation period was 7 days (range 2-17, IQR 5-10). The median incubation period was significantly shorter in group A than in group C (5 days [IQR 4-8] vs 11 days [6-12]; p<0·0001). There were no confirmed cases in patients and visitors who visited the emergency room on May 29 and who were exposed only to potentially contaminated environment without direct contact with the index case. The main risk factor for transmission of MERS-CoV was the location of exposure. INTERPRETATION: Our results showed increased transmission potential of MERS-CoV from a single patient in an overcrowded emergency room and provide compelling evidence that health-care facilities worldwide need to be prepared for emerging infectious diseases. FUNDING: None.


Subject(s)
Coronavirus Infections/transmission , Disease Outbreaks/statistics & numerical data , Disease Transmission, Infectious , Emergency Service, Hospital , Middle East Respiratory Syndrome Coronavirus/isolation & purification , Adolescent , Adult , Aged , Aged, 80 and over , Coronavirus Infections/diagnosis , Coronavirus Infections/epidemiology , Cross Infection/prevention & control , Cross Infection/transmission , Crowding , Female , Health Personnel/statistics & numerical data , Humans , Incidence , Male , Middle Aged , Occupational Exposure/statistics & numerical data , Republic of Korea/epidemiology , Risk Factors , Young Adult
16.
Crit Care Med ; 45(6): e552-e558, 2017 Jun.
Article in English | MEDLINE | ID: mdl-28333762

ABSTRACT

OBJECTIVE: To assess the impact of targeted interventions on trends in central line-associated bloodstream infection. DESIGN: A before-and-after study between January 2013 and September 2014. SETTING: Tertiary hospital in the Republic of Korea. PATIENTS: All patients with central-line catheters in the hospital. INTERVENTIONS: In September 2013, interventions that targeted central line insertion practices were implemented in 10 ICUs, including compliance monitoring with a central line insertion practices bundle and use of an all-inclusive catheter kit. The impact of targeted interventions on trends in central line-associated bloodstream infection was evaluated by segmented autoregression analysis of an interrupted time series. MEASUREMENTS AND MAIN RESULTS: The average hospital-wide central line-associated bloodstream infection rates in the baseline and intervention periods were 1.84 and 1.56 per 1,000 catheter-days, respectively. During the baseline period, there was an increase of central line-associated bloodstream infection rate of 0.12 per 1,000 catheter-days per month. In the intervention period, there was a decrease of central line-associated bloodstream infection rate of 0.16 per 1,000 catheter-days per month (change in slope, -0.28; 95% CI, -0.37 to -0.19; p < 0.0001). In ICUs, the average central line-associated bloodstream infection rates in the baseline and intervention periods were 1.92 and 1.64 per 1,000 catheter-days, respectively. During the baseline period, there was an increase of central line-associated bloodstream infection rate of 0.18 per 1,000 catheter-days per month in ICUs. After sequential-targeted interventions, there was a decrease of central line-associated bloodstream infection rate of 0.16 per 1,000 catheter-days per month (change in slope, -0.34; 95% CI, -0.50 to -0.18; p = 0.0007). CONCLUSIONS: Targeted interventions were associated with significant changes in trends in the occurrence rate of central line-associated bloodstream infection in ICUs and the entire hospital.


Subject(s)
Catheter-Related Infections/prevention & control , Cross Infection/prevention & control , Infection Control/organization & administration , Intensive Care Units/supply & distribution , Adult , Aged , Catheter-Related Infections/epidemiology , Catheterization, Central Venous/methods , Central Venous Catheters , Cross Infection/epidemiology , Female , Guideline Adherence , Humans , Infection Control/standards , Male , Middle Aged , Patient Care Bundles/methods , Patient Care Bundles/standards , Practice Guidelines as Topic , Republic of Korea , Tertiary Care Centers/standards
17.
J Antimicrob Chemother ; 72(9): 2454-2460, 2017 09 01.
Article in English | MEDLINE | ID: mdl-28595277

ABSTRACT

Objectives: We previously reported the first case of vancomycin treatment failure due to development of vancomycin-intermediate resistance in a patient with an MRSA of ST72, a community genotype in Korea. We investigated two isogenic MRSA strains from this patient, who experienced treatment failure with vancomycin and rifampicin. Methods: We tracked the genetic alterations that confer reduced susceptibility to vancomycin on those two isogenic MRSA strains by WGS. Results: Five non-synonymous mutations were identified, including rpoB (H481Y), dprA (G196C), femA (F92C), vraR (E127K) and agrC (E391stop). We further studied the role of a mutation of vraR in reduced susceptibility to vancomycin. Introduction of the mutated vraR (E127K) into a vancomycin-susceptible Staphylococcus aureus strain resulted in an increase in vraSR mRNA expression and vancomycin MIC and development of the hetero-VISA phenotype, which was confirmed by the population analysis profile (PAP)/AUC. Electron microscopy showed increased cell wall thickness in the strains with mutated vraR. Conclusions: Based on the genomic data, molecular experiments and PAP and cell wall analyses, we propose that a single mutation of vraR is associated with the reduced susceptibility to vancomycin in MRSA and further treatment failure.


Subject(s)
Anti-Bacterial Agents/pharmacology , Community-Acquired Infections/microbiology , Methicillin-Resistant Staphylococcus aureus/drug effects , Methicillin-Resistant Staphylococcus aureus/genetics , Staphylococcal Infections/microbiology , Vancomycin/pharmacology , Anti-Bacterial Agents/metabolism , Bacterial Proteins/genetics , Cell Wall/drug effects , Cell Wall/genetics , Cell Wall/ultrastructure , Community-Acquired Infections/drug therapy , DNA-Binding Proteins/genetics , Genotype , Humans , Methicillin-Resistant Staphylococcus aureus/isolation & purification , Methicillin-Resistant Staphylococcus aureus/metabolism , Microbial Sensitivity Tests , Microscopy, Electron , Mutation , Phenotype , Staphylococcal Infections/drug therapy , Treatment Failure , Vancomycin/metabolism
18.
Infection ; 45(1): 67-74, 2017 Feb.
Article in English | MEDLINE | ID: mdl-27541039

ABSTRACT

PURPOSE: Various immunocompromised conditions increase the risk of meningitis caused by Listeria monocytogenes. However, the relative importance of these risk factors has not been well established. We determined the risk factors that predict meningitis due to L. monocytogenes compared to that caused by Streptococcus pneumoniae. METHODS: A nationwide multicenter case-control study was conducted in Korea. Cases of meningitis caused by L. monocytogenes between 1998 and 2013 were included. Patients with pneumococcal meningitis were included as controls. Multivariate logistic regression analysis was used to predict the risk factors of Listeria meningitis. RESULTS: A total of 36 cases and 113 controls were enrolled. The most significant predictive risk factor of Listeria meningitis was a prior history of receiving immunosuppressive therapy (odds ratio 8.12, 95 % CI 2.47-26.69). Chronic liver disease was the second most important predictive risk factor (OR 5.03, 95 % CI 1.56-16.22). Delaying appropriate antibiotic therapy by more than 6 h (hazard ratio 2.78) and fatal underlying disease (hazard ratio 2.88) were associated with increased mortality. CONCLUSIONS: Patients with a prior history of receiving immunosuppressive therapy within 1 month and chronic liver disease have 8.1-fold and 5-fold increased risk of meningitis by L. monocytogenes compared to S. pneumoniae, respectively.


Subject(s)
Listeria monocytogenes , Meningitis, Listeria/epidemiology , Meningitis, Pneumococcal/epidemiology , Adult , Aged , Case-Control Studies , Female , Humans , Kaplan-Meier Estimate , Male , Middle Aged , Republic of Korea/epidemiology , Risk Factors , Treatment Outcome
19.
J Infect Chemother ; 23(11): 769-773, 2017 Nov.
Article in English | MEDLINE | ID: mdl-28545936

ABSTRACT

During the 2015 Korean MERS outbreak, we experienced atypical presentations of MERS-CoV infections in three immunocompromised hosts that warranted exceptional management. Case 1 showed delayed symptom development after a four-day asymptomatic period, Case 2 experienced a 20-day incubation period, and Case 3 exhibited persistent viral shedding without clinical deterioration. Recognizing these exceptions is extremely important in the management of MERS-CoV-exposed or -infected patients and for control of potential MERS outbreaks.


Subject(s)
Coronavirus Infections/diagnosis , Coronavirus Infections/epidemiology , Disease Outbreaks/prevention & control , Immunocompromised Host , Middle East Respiratory Syndrome Coronavirus/isolation & purification , Adult , Antiviral Agents/therapeutic use , Blood Component Transfusion , Coronavirus Infections/therapy , Coronavirus Infections/virology , Fatal Outcome , Female , Glucocorticoids/therapeutic use , Hematologic Neoplasms/therapy , Humans , Immunosuppression Therapy/adverse effects , Infectious Disease Incubation Period , Male , Middle Aged , Middle East Respiratory Syndrome Coronavirus/physiology , Peripheral Blood Stem Cell Transplantation/adverse effects , Republic of Korea/epidemiology , Reverse Transcriptase Polymerase Chain Reaction , Time Factors , Tomography, X-Ray Computed , Virus Shedding
20.
Ann Intern Med ; 165(2): 87-93, 2016 07 19.
Article in English | MEDLINE | ID: mdl-27272273

ABSTRACT

BACKGROUND: In 2015, a large outbreak of Middle East respiratory syndrome (MERS) occurred in the Republic of Korea. Half of the cases were associated with a tertiary care university hospital. OBJECTIVE: To document the outbreak and successful control measures. DESIGN: Descriptive study. SETTING: A 1950-bed tertiary care university hospital. PATIENTS: 92 patients with laboratory-confirmed MERS and 9793 exposed persons. MEASUREMENTS: Description of the outbreak, including a timeline, and evaluation of the effectiveness of the control measures. RESULTS: During the outbreak, 92 laboratory-confirmed MERS cases were associated with a large tertiary care hospital, 82 of which originated from unprotected exposure to 1 secondary patient. Contact tracing and monitoring exposed patients and assigned health care workers were at the core of the control measures in the outbreak. Nontargeted screening measures, including body temperature screening among employees and visitors at hospital gates, monitoring patients for MERS-related symptoms, chest radiographic screening, and employee symptom monitoring, did not detect additional patients with MERS without existing transmission links. All in-hospital transmissions originated from 3 patients with MERS who also had pneumonia and productive cough. LIMITATIONS: This was a retrospective single-center study. Statistical analysis could not be done. Because this MERS outbreak originated from a superspreader, effective control measures could differ in endemic areas or in other settings. CONCLUSION: Control strategies for MERS outbreaks should focus on tracing contacts of persons with epidemiologic links. Adjusting levels of quarantine and personal protective equipment according to the assumed infectivity of each patient with MERS may be appropriate. PRIMARY FUNDING SOURCE: Samsung Biomedical Research Institute.


Subject(s)
Coronavirus Infections/prevention & control , Cross Infection/prevention & control , Disease Outbreaks/prevention & control , Pneumonia, Viral/prevention & control , Contact Tracing , Coronavirus Infections/diagnostic imaging , Coronavirus Infections/epidemiology , Coronavirus Infections/transmission , Cross Infection/diagnostic imaging , Cross Infection/epidemiology , Cross Infection/transmission , Humans , Lung/diagnostic imaging , Pneumonia, Viral/diagnostic imaging , Pneumonia, Viral/epidemiology , Pneumonia, Viral/transmission , Protective Clothing , Quarantine , Radiography , Republic of Korea/epidemiology , Retrospective Studies , Tertiary Care Centers
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