Whole-genome landscape of histone H3K4me3 modification during sperm cell lineage development in tomato.

BACKGROUND: During male gametogenesis of flowering plants, sperm cell lineage (microspores, generative cells, and sperm cells) differentiated from somatic cells and acquired different cell fates. Trimethylation of histone H3 on lysine 4 (H3K4me3) epigenetically contributes to this process, however, it remained unclear how H3K4me3 influences the gene expression in each cell type. Here, we conducted chromatin immunoprecipitation sequencing (ChIP-seq) to obtain a genome-wide landscape of H3K4me3 during sperm cell lineage development in tomato (Solanum lycopersicum). RESULTS: We show that H3K4me3 peaks were mainly enriched in the promoter regions, and intergenic H3K4me3 peaks expanded as sperm cell lineage differentiated from somatic cells. H3K4me3 was generally positively associated with transcript abundance and served as a better indicator of gene expression in somatic and vegetative cells, compared to sperm cell lineage. H3K4me3 was mutually exclusive with DNA methylation at 3' proximal of the transcription start sites. The microspore maintained the H3K4me3 features of somatic cells, while generative cells and sperm cells shared an almost identical H3K4me3 pattern which differed from that of the vegetative cell. After microspore division, significant loss of H3K4me3 in genes related to brassinosteroid and cytokinin signaling was observed in generative cells and vegetative cells, respectively. CONCLUSIONS: Our results suggest the asymmetric division of the microspore significantly reshapes the genome-wide distribution of H3K4me3. Selective loss of H3K4me3 in genes related to hormone signaling may contribute to functional differentiation of sperm cell lineage. This work provides new resource data for the epigenetic studies of gametogenesis in plants.

The methyl-CpG-binding domain family member PEM1 is essential for Ubisch body formation and pollen exine development in rice.

Pollen exine is composed of finely-organized nexine, bacula and tectum, and is crucial for pollen viability and function. Pollen exine development involves a complicated molecular network that coordinates the interaction between pollen and tapetal cells, as well as the biosynthesis, transport and assembly of sporopollenin precursors; however, our understanding of this network is very limited. Here, we report the roles of PEM1, a member of methyl-CpG-binding domain family, in rice pollen development. PEM1 expressed constitutively and, in anthers, its expression was detectable in tapetal cells and pollen. This predicted PEM1 protein of 240 kDa had multiple epigenetic-related domains. pem1 mutants exhibited abnormal Ubisch bodies, delayed exine occurrence and, finally, defective exine, including invisible bacula, amorphous and thickened nexine and tectum layer structures, and also had the phenotype of increased anther cuticle. The mutation in PEM1 did not affect the timely degradation of tapetum. Lipidomics revealed much higher wax and cutin contents in mutant anthers than in wild-type. Accordingly, this mutation up-regulated the expression of a set of genes implicated in transcriptional repression, signaling and diverse metabolic pathways. These results indicate that PEM1 mediates Ubisch body formation and pollen exine development mainly by negatively modulating the expression of genes. Thus, the PEM1-mediated molecular network represents a route for insights into mechanisms underlying pollen development. PEM1 may be a master regulator of pollen exine development.

Long-Distance Continuous Self-Transport of a Droplet by Merging Droplets on a Graphene-Covered Multibranch Gradient Groove Surface.

Although the self-transport of liquid droplets by a gradient-textured substrate can break away from the energy input, the long distance and even continuous spontaneous motion of droplets will be limited by the length in the surface-gradient direction. This article introduces a novel design with a monolayer graphene-covered multibranch gradient groove surface (GMGGS). The design aims to achieve long-distance, continuous self-transport of a mercury (Hg) droplet by merging with other mercury droplets, and the process is carried out using molecular dynamics (MD) simulation. This method achieves the merging of mercury droplets through the structure of multibranch gradient grooves, and we have observed that the merged mercury droplet can be reaccelerated in the gradient groove. The results demonstrate that droplet merging allows for control over the surface morphology variations of mercury droplets within the gradient groove. This creates a forward pressure difference, which leads to reacceleration of the mercury droplets. In light of this mechanism, the trunk droplet can achieve long-distance continuous self-transport on the GMGGS by continuously merging with branch droplets. These findings will broaden our comprehension of droplet merging and self-transport behavior, offering corresponding theoretical support for the long-distance continuous self-transport of droplets.

Synergistic Antibacterial Surface with Liquid Repellency and Enhanced Photothermal Bactericidal Activity.

The presence of microorganisms on biomedical devices and food packaging surfaces poses an important threat to human health. Superhydrophobic surfaces, a powerful tool to combat pathogenic bacterial adhesion, are threatened by their poor robustness. As a supplement, photothermal bactericidal surfaces may be expected to kill adhered bacteria. Using copper mesh as a mask, we prepared a superhydrophobic surface with a homogeneous conical array. The surface shows synergistic antibacterial properties, including a superhydrophobic character against bacterial adhesion and photothermal bactericidal activity. As a result of the excellent liquid repellency, the surface could highly repel the adherence of bacteria after immersing in a bacterial suspension for 10 s (95%) and 1 h (57%). Photothermal graphene can easily eliminate most adhered bacteria during the subsequent treatment of near-infrared (NIR) radiation. After a self-cleaning wash, the deactivated bacteria were easily rinsed off the surface. Furthermore, this antibacterial surface exhibited an approximately 99.9% resisted bacterial adhesion rate regardless of planar and various uneven surfaces. The results offer promising advancement of an antibacterial surface combining both adhesion resistance and photothermal bactericidal activity in fighting microbial infections.

DNA methylation dynamics of sperm cell lineage development in tomato.

During the sexual reproduction of higher plants, DNA methylation and transcription are broadly changed to reshape a microspore into two sperm cells (SCs) and a vegetative cell (VC). However, when and how the DNA methylation of SCs is established remains not fully understood. Here we investigate the DNA methylation (5 mC) dynamics of SC lineage and the VC in tomato using whole-genome bisulfite sequencing. We find the asymmetric division of the microspore gives its two daughter cells differential methylome. Compared with the generative cell (GC), the VC is hypomethylated at CG sites while hypermethylated at CHG and CHH sites, with the majority of differentially methylation regions targeted to transposable elements (TEs). SCs have a nearly identical DNA methylome to the GC, suggesting that the methylation landscape in SCs may be pre-established following the asymmetric division or inherited from the GC. The random forest classifier for predicting gene and TE expression shows that methylation within the gene body is a more powerful predictor for gene expression. Among all tested samples, gene and TE expression in the microspore may be more predictable by DNA methylation. Our results depict an intact DNA methylome landscape of SC lineage in higher plants, and reveal that the impact of DNA methylation on transcription is variant in different cell types.

The role of ventral tegmental area orexinergic afferents in depressive-like behavior in a chronic unpredictable mild stress (CUMS) mouse model.

Orexin has been implicated in comorbid diseases of depression, making it a promising target for anti-depression treatment. Although orexin neurons exhibit abnormal activity in depression, the neurocircuit mechanism of orexin remains unclear. As one of the important downstream factors of orexin neurons, the ventral tegmental area (VTA) is considered crucial to the mechanism of depression. However, the role of VTA orexinergic afferents in depression remains unclear. In this study, we applied a combination of opto/chemogenetic and neuropharmacology methods to investigate whether the VTA orexinergic afferents participate in the pathogenesis of depression in a chronic unpredictable mild stress (CUMS) mouse model. We found that c-Fos expression in these VTA-projecting orexin neurons specifically decreased in CUMS-treated mice. Optogenetic and chemogenetic activation of orexin terminals in the VTA significantly reversed depressive behavior. Microinjection of orexin-A, but not orexin-B, into the VTA significantly improved depressive-like behavior. Our study provided direct evidence that the VTA orexinergic afferents participate in the mechanism of depression, and the orexin-1 receptor plays a major role.

Cactus-Inspired Janus Membrane with a Conical Array of Wettability Gradient for Efficient Fog Collection.

Fog collection plays an important role in alleviating the global water shortage. Despite great progress in creating bionic surfaces to collect fog, water droplets still could adhere to the microscale hydrophilic region and reach the thermodynamic stable state before falling, which delays the transport of water and hinders the continuous fog collection. Inspired by lotus leaves and cactuses, we designed a Janus membrane that functions to both collect fog from the air and transport it to a certain region. The Janus membrane with opposite wettability contains conical microcolumns with a wettability gradient and hydrophilic copper mesh surface. The apexes of conical microcolumns are superhydrophobic and the rest are hydrophobic. The fog droplets were deposited, coalesced, and directionally transported to the bottom of the conical microcolumns. Then, the droplets unidirectionally passed through the membrane and flowed into the water film on the surface of the copper mesh. The asymmetric structural and wettability merits endow the Janus membrane with an improved fog collection of ∼7.05 g/cm2/h. The study is valuable for designing and developing fluid control equipment in fog collection, liquid manipulation, and microfluidics.

Transcriptomics analyses reveal the molecular roadmap and long non-coding RNA landscape of sperm cell lineage development.

Sperm cell (SC) lineage development from the haploid microspore to SCs represents a unique biological process in which the microspore generates a larger vegetative cell (VC) and a smaller generative cell (GC) enclosed in the VC, then the GC further develops to functionally specified SCs in the VC for double fertilization. Understanding the mechanisms of SC lineage development remains a critical goal in plant biology. We isolated individual cells of the three cell types, and characterized the genome-wide atlas of long non-coding (lnc) RNAs and mRNAs of haploid SC lineage cells. Sperm cell lineage development involves global repression of genes for pluripotency, somatic development and metabolism following asymmetric microspore division and coordinated upregulation of GC/SC preferential genes. This process is accompanied by progressive loss of the active marks H3K4me3 and H3K9ac, and accumulation of the repressive methylation mark H3K9. The SC lineage has a higher ratio of lncRNAs to mRNAs and preferentially expresses a larger percentage of lncRNAs than does the non-SC lineage. A co-expression network showed that the largest set of lncRNAs in these nodes, with more than 100 links, are GC-preferential, and a small proportion of lncRNAs co-express with their neighboring genes. Single molecular fluorescence in situ hybridization showed that several candidate genes may be markers distinguishing the three cell types of the SC lineage. Our findings reveal the molecular programming and potential roles of lncRNAs in SC lineage development.

Ultrahigh Efficient Collection of Underwater Bubbles by High Adsorption and Transport, Coalescence, and Collection Integrating a Conical Arrayed Surface.

The capture and utilization of underwater fuel bubbles such as methane can alleviate the greenhouse effect, solve the global energy crisis, and possibly improve the endurance of underwater equipment. However, previous research routinely failed to achieve the integrated process of continuous adsorption, transportation, and collection of bubbles limited by the trade-off between the bubble adhesion and transport efficiency dependent on interfacial pinning, tremendously hindering the direct capture and utilization of underwater fuel bubbles. To break through this bottleneck, a magnetic-guided conical arrayed surface (CAS) associated with a laser etching technique is fabricated conveniently to realize superhydrophobicity. The bubbles on laser-etched CAS have higher adhesiveness and low-pinning transport compared with those on the nonlaser-etched surface. Intriguingly, the gas film adsorbed within the CAS seems to be a gas channel, which accelerates the bubble coalescence and fast spreading to eventually realize the integration of transport, coalescence, and collection. The dynamic behaviors of bubble adsorption, transportation, and coalescence on CAS are probed to reveal the mechanism of the gas film-generating process within conical arrays. Furthermore, a novel underwater bubble-collecting device with multiangled CAS is proposed to achieve multidirectional capture, highly efficient transportation, and collection of rising bubbles. The results advance our understanding of dynamic behaviors of bubbles at solid-liquid interfaces and facilitate design and manufacturing of an apparatus for bubble collection.

Temperature-responsive peristome-structured smart surface for the unidirectional controllable motion of large droplets.

The manipulation of fast, unidirectional motion for large droplets shows important applications in the fields of fog collection and biochemical reactions. However, driving large droplets (>5 µL) to move directionally and quickly remains challenging due to the nonnegligible volume force. Herein, we fabricated a scalable, bionic peristome substrate with a microcavity width of 180 µm using a 3D printing method, which could unidirectionally drive a large water droplet (~8 µL) at a speed reaching 12.5 mm/s by temperature-responsive wettability. The substrate surface was grafted with PNIPAAm, which could reversibly change its wettability in response to temperature, thereby enabling a temperature-responsive smart surface that could regulate droplet movement in real-time by changing the temperature. A series of temperature-responsive smart patterns were designed to induce water transport along specific paths to further realize controllable droplet motion with the antibacterial treatment of predesignated areas. The ability to achieve temperature-responsive unidirectional motion and dynamic control of droplet movement could allow programmable fluidic biosensors and precision medical devices. A temperature-responsive smart surface was produced to control the unidirectional motion of large droplets between spreading and pinning movement by changing the surface wettability.

Research progress of bionic fog collection surfaces based on special structures from natural organisms.

With the increasing shortage of water resources, people are seeking more innovative ways to collect fog to meet the growing need for production and the demand for livelihood. It has been proven that fog collection is efficient for collecting water in dry but foggy areas. As a hot research topic in recent years, bionic surfaces with fog collection functions have attracted widespread attention in practical applications and basic research. By studying natural organisms and bionic surfaces, more avenues are provided for the development of fog collection devices. Firstly, starting from biological prototypes, this article explored the structural characteristics and fog collection mechanisms of natural organisms such as spider silk, desert beetles, cactus, Nepenthes and other animals and plants (Sarracenia, shorebird and wheat awn), revealing the fog collection mechanism of the natural organisms based on microstructures. Secondly, based on the theory of interfacial tension, we would delve into the fog collection function's theoretical basis and wetting model, expounding the fog collection mechanism from a theoretical perspective. Thirdly, a detailed introduction was given to prepare bionic surfaces and recently explore fog collection devices. For bionic surfaces of a single biological prototype, the fog collection efficiency is about 2000-4000 mg cm-2 h-1. For bionic surfaces of multiple biological prototypes, the fog collection efficiency reaches 7000 mg cm-2 h-1. Finally, a critical analysis was conducted on the current challenges and future developments, aiming to promote the next generation of fog collection devices from a scientific perspective from research to practical applications.

How demographic and clinical characteristics contribute to the recovery of post-stroke dysphagia?

ABSTRACT: According to the analysis to find out how demographic and clinical characteristics influent the dysphagia outcome after stroke, furthermore, giving some insights to clinical treatment.One hundred eighty post-stroke dysphagia (PSD) patients were enrolled in this retrospective study at the stroke rehabilitation department. The outcome measurements are beside water swallow test at discharge and length of stay at hospital. Twenty-five demographic and clinical variables were collected for this study. Logistic regression and multilinear regression were utilized to estimate models to identify the risk and protect predictors of PSD outcome.Mouth-opening degree, drooling severity scale (DSS) level, mini-mental state exam (MMSE) level, Barthel index and Berg balance scale were significant different between recovered and unrecovered group. Type of stroke, MMSE degree, DSS and hemoglobin level shown significant predictive value for PSD outcome in logistic regression. In addition, obstructive sleep apnea (OSA) and DSS degree were important risk factors for PSD outcome. Gender, body mass index, drinking, hypertension, recurrent stroke, water swallow test level on admission, Berg balance scale, DSS and days between onset to admission shown significant predictive value for length of stay of PSD patients.PSD outcome was influenced by type of stroke, MMSE degree, DSS and hemoglobin level significantly and obstructive sleep apnea act as an important risk role for PSD recovery.

pH-Responsive Smart Wettability Surface with Dual Bactericidal and Releasing Properties.

Biomaterial-associated infections caused by pathogenic bacteria have important implications on human health. This study presents the design and preparation of a smart surface with pH-responsive wettability. The smart surface exhibited synergistic antibacterial function, with high liquid repellency against bacterial adhesion and highly effective bactericidal activity. The wettability of the surface can switch reversibly between superhydrophobicity and hydrophobicity in response to pH; this controls bacterial adhesion and release. Besides, the deposited silver nanoparticles of the surface were also responsible for bacterial inhibition. Benefiting from the excellent liquid repellency, the surface could highly resist bacterial adhesion after immersing in a bacterial suspension for 10 s (85%) and 1 h (71%). Adhered bacteria can be easily eliminated using deposited silver nanoparticles during the subsequent treatment of alkaline bacterial suspension, and the ratio of deactivated bacteria was above 75%. After the pH returned to neutral, the deactivated bacteria can be easily released from the surface. This antibacterial surface showed an improved bacterial removal efficiency of about 99%. The results shed light on future antibacterial applications of the smart surface combining both bactericidal and adhesion-resistant functionalities.

A controllable oil-triggered actuator with aligned microchannel design for implementing precise deformation.

Soft actuators with the integration of facile preparation, rapid actuation rate, sophisticated motions, and precise control over deformation for application in complex devices are still highly desirable. Inspired by the aligned structures of moisture responsive pineal scales, an oil-triggered Janus actuator composed of a smooth hydrophobic surface and a superhydrophobic surface with aligned microchannels by simple laser etching was fabricated successfully, which can deform into various desirable shapes and recover to the original shape when triggered by oil and ethanol molecules. The aligned microchannel design causes different oil spread distances in the longitudinal and transverse directions, resulting in orientation-controlled bending and twisting with large-scale displacement. By changing the orientations of the patterned microchannels, one-dimensional folding deformation, twisting, rolling curling and object-inspired architectures can be facilely programmed. The reversible oil-triggered actuator will inspire more attractive applications such as in vivo surgery, biomimetic devices, energy harvesting systems and soft robotics.

Moisture-Responsive Graphene Actuators Prepared by Two-Beam Laser Interference of Graphene Oxide Paper.

Here, we reported an ingenious fabrication of moisture responsive graphene-based actuator via unilateral two-beam laser interference (TBLI) treatment of graphene oxide (GO) papers. TBLI technique has been recognized as a representative photoreduction and patterning strategy for hierarchical structuring of GO. The GO paper can be reduced and cut into grating-like periodic reduced graphene oxide (RGO) microstructures due to laser ablation effect. However, the lower light transmittance of the thick GO paper and the corresponding thermal relaxation phenomenon make it impossible to trigger complete reduction, leading to the formation of the anisotropic GO/reduced GO (RGO) bilayer structure. Interestingly, the RGO side that feature lower OCGs and higher roughness shows strong water adsorption due to the formation of micronanostructures. Due to the different water adsorption capacities of the two sides, a flower moisture-responsive actuator has been fabricated, which exhibits "opening" and "closing" behavior under different humidity conditions.

Janus Soft Actuators with On-Off Switchable Behaviors for Controllable Manipulation Driven by Oil.

Soft actuators have tremendous applications in diverse fields. Facile preparation, rapid actuation, and versatile actions are always pursued when developing new types of soft actuators. In this paper, we present a facile method integrating laser etching and mechanical cutting to prepare Janus actuators driven by oil. A Janus film with superhydrophobic and hydrophobic sides was fabricated successfully. By cutting the functional layer at the desired positions, a number of quintessential oil-driven soft devices were demonstrated. Furthermore, Janus actuators with surfaces of different wettabilities exhibited different swelling behaviors, and different media manifested different surface extensions; thus, these actuators are promising candidates for soft actuators and also realized on-off switchability between an oil/water mixture and ethanol. This study offers novel insight into the design of soft actuators, and this insight may be helpful for developing an oil-driven soft actuator that can be operated like a human finger to manipulate any object and extending stimuli-responsive applications for soft robotics.

A bioinspired structured graphene surface with tunable wetting and high wearable properties for efficient fog collection.

Inspired by the fog harvesting ability of the spider net and the interphase wetting surface of Namib desert beetles, we designed a kind of special bioinspired hybrid wetting surface on a Cu mesh by combining polydimethylsiloxane (PDMS) and graphene (G). A surface containing hydrophobic and superhydrophobic areas is prepared by a combination of laser etching and ultrasonic vibration. Thus, this as-prepared hybrid wetting surface can quickly drive tiny water droplets toward more wettable regions, which makes a great contribution to the improvement of collection efficiency. Moreover, the PDMS/G surface not only is tolerant to many stresses such as excellent anti-corrosion ability, anti-UV exposure and oil contamination, but also shows self-healing simply by burning the worn areas, which thus endows the surface with tunable-wettability change between flame treatment and abrasive wear. This study offers a novel insight into the design of burned healed materials with interphase wettability that may enhance the fog collection efficiency in engineering liquid harvesting equipment and realizes renewable materials in situ cheaply and rapidly by processes that can be easily scaled and automated.

Temperature-tunable wettability on a bioinspired structured graphene surface for fog collection and unidirectional transport.

We designed a type of smart bioinspired wettable surface with tip-shaped patterns by combining polydimethylsiloxane (PDMS) and graphene (PDMS/G). The laser etched porous graphene surface can produce an obvious wettability change between 200 °C and 0 °C due to a change in aperture size and chemical components. We demonstrate that the cooperation of the geometrical structure and the controllable wettability play an important role in water gathering, and surfaces with tip-shaped wettability patterns can quickly drive tiny water droplets toward more wettable regions, so making a great contribution to the improvement of water collection efficiency. In addition, due to the effective cooperation between super hydrophobic and hydrophilic regions of the special tip-shaped pattern, unidirectional water transport on the 200 °C heated PDMS/G surface can be realized. This study offers a novel insight into the design of temperature-tunable materials with interphase wettability that may enhance fog collection efficiency in engineering liquid harvesting equipment, and realize unidirectional liquid transport, which could potentially be applied to the realms of microfluidics, medical devices and condenser design.

Reed Leaf-Inspired Graphene Films with Anisotropic Superhydrophobicity.

Controlling the wettability of graphene and its derivatives is critical for broader applications. However, the dynamic dewetting performance of graphene is usually overlooked. Currently, superhydrophobic graphene with an anisotropic wettability is rare. Inspired by natural reed leaves, we report an ingenious fabrication process combining photolithography and laser holography technologies to create biomimetic graphene surfaces that demonstrate anisotropic wettability along two directions of grooved hierarchical structures, which are similar to reed leaf veins. Microgrooved structures with a period of 200 µm were fabricated via photolithography to endow the substrate with an obvious anisotropic wettability. Two-beam laser interference treatments of the graphene oxide (GO) film on the grooved substrate removed most of the hydrophilic oxygen-containing groups on the GO sheets and increased the surface roughness by introducing additional hierarchical micro-nanostructures. The combined effects endowed the resultant graphene films with a unique anisotropic superhydrophobicity similar to that of reed leaves. Superhydrophobic graphene surfaces with anisotropic antiwetting behavior might allow further innovations based on graphene in the fields of bionics and electronics.

Bioinspired Fabrication of one dimensional graphene fiber with collection of droplets application.

We designed a kind of smart bioinspired fiber with multi-gradient and multi-scale spindle knots by combining polydimethylsiloxane (PDMS) and graphene oxide (GO). Multilayered graphene structures can produce obvious wettability change after laser etching due to increased roughness. We demonstrate that the cooperation between curvature and the controllable wettability play an important role in water gathering, which regulate effectively the motion of tiny water droplets. In addition, due to the effective cooperation of multi-gradient and multi-scale hydrophilic spindle knots, the length of the three-phase contact line (TCL) can be longer, which makes a great contribution to the improvement of collecting efficiency and water-hanging ability. This study offers a novel insight into the design of smart materials that may control the transport of tiny drops reversibly in directions, which could potentially be extended to the realms of in microfluidics, fog harvesting filtration and condensers designs, and further increase water collection efficiency and hanging ability.