Distribution and genetic diversity of the human polyomaviruses JC and BK in surface water and sewage treatment plant during 2009 in Porto Alegre, Southern Brazil.

The human polyomaviruses JC and BK (JCPyV and BKPyV) are ubiquitous, species-specific viruses that belong to the family Polyomaviridae. These viruses are known to be excreted in human urine, and they are potential indicators of human wastewater contamination. In order to assess the distribution of both JCPyV and BKPyV in urban water samples collected from a sewage treatment plant (STP) and from a canalized water stream of Porto Alegre, Brazil, two nested-PCR assays were optimized and applied to the samples collected. The amplicons obtained were submitted to sequencing, and the sequences were analyzed with sequences of human polyomaviruses previously deposited in GenBank. Twelve out of 30 water samples (40%) were JCPyV positive, whereas six samples (20%) were BKPyV positive. The sequencing results confirmed the presence of JCPyV subtypes 1 and 3, whereas only BKPyV Ia and Ib were found. This study shows for the first time the presence of human polyomaviruses in surface water and in samples collected in a sewage treatment plant in southern Brazil.

Performance assessment of prosthetic heart valves using the energy index method.

Traditional methods of characterizing valvular performance use some estimation of the effective opening area and the percent regurgitant volume. These methods are cumbersome because two parameters are used and their importance relative to one another is not revealed. The authors propose the use of a single parameter that is physically meaningful and accounts for characteristics of the valve throughout the cardiac cycle. The energy index, derived with use of a phase-by-phase analysis of the cardiac cycle, describes the energetic efficiency of the valve. The method's final form is: [Formula: see text] where Eps is the hydraulic energy available after systole, E+ is the energy dissipated in the valve while flow is positive, [Symbol: see text]_ and [Symbol: see text] are the regurgitant and forward volumes, respectively. Use of the El requires on-line measurement of valvular flow rate and pressure drop. The El was applied to a Medtronic-Hall (Minneapolis, MN), 25 mm prosthetic valve mounted in the aortic position of a cardiovascular simulator. Mild and severe degrees of valvular stenosis and regurgitance were simulated. Results indicate that the El is sensitive to either valvular condition and remains nearly constant, at 87%, for the normal valve tested over cardiac rates ranging from 50 to 100 beats per minute.

Distribution and genetic diversity of the human polyomaviruses JC and BK in surface water and sewage treatment plant during 2009 in Porto Alegre, Southern Brazil / Distribuição e diversidade genética dos poliomavírus humanos JC e BK em águas superficiais e de estação de tratamento de esgoto durante 2009 em Porto Alegre, sul do Brasil

Abstract The human polyomaviruses JC and BK (JCPyV and BKPyV) are ubiquitous, species-specific viruses that belong to the family Polyomaviridae. These viruses are known to be excreted in human urine, and they are potential indicators of human wastewater contamination. In order to assess the distribution of both JCPyV and BKPyV in urban water samples collected from a sewage treatment plant (STP) and from a canalized water stream of Porto Alegre, Brazil, two nested-PCR assays were optimized and applied to the samples collected. The amplicons obtained were submitted to sequencing, and the sequences were analyzed with sequences of human polyomaviruses previously deposited in GenBank. Twelve out of 30 water samples (40%) were JCPyV positive, whereas six samples (20%) were BKPyV positive. The sequencing results confirmed the presence of JCPyV subtypes 1 and 3, whereas only BKPyV Ia and Ib were found. This study shows for the first time the presence of human polyomaviruses in surface water and in samples collected in a sewage treatment plant in southern Brazil.

Resumo Os poliomavírus humanos JC e BK (JCPyV e BKPyV) são virus ubíquos, espécie-específicos, pertencentes à família Polyomaviridae. Estes vírus são conhecidos por serem excretados pela urina humana, sendo considerados potenciais indicadores de contaminação por águas residuais urbanas. Buscando acessar a distribuição de JCPyV e BKPyV em amostras de águas coletadas de uma estação de tratamento de esgoto e de um arroio canalizado de Porto Alegre, Brasil, duas técnicas de nested-PCR foram otimizadas e aplicadas às amostras coletadas. Os amplificados obtidos foram submetidos ao sequenciamento e suas sequências analisadas com base em sequências de poliomavírus humanos previamente depositadas no GenBank. Doze de 30 amostras de água (40%) foram positivas para JCPyV, enquanto 6 amostras (20%) foram positivas para BKPyV. Os resultados do sequenciamento confirmaram a presença dos subtipos 1 e 3 de JCPyV, enquanto apenas os BKPyV Ia e Ib foram encontrados. Este estudo demonstra pela primeira vez a presença de poliomavírus humanos em águas superficiais e em amostras coletadas em uma estação de tratamento de esgoto na região sul do Brasil.

Effect of simulated valvular stenoticity on predicted flow area for a bileaflet valve using the Gorlin equation.

The possibility that the discharge coefficient (Cd) for a mechanical heart valve (MHV) is affected by valvular stenosis is addressed. A 29 mm bileaflet (Si. Jude Medical) mitral valve is tested on a cardiovascular duplicator (CVD) in its normal state and under two degrees of simulated stenosis. Stenoticity is simulated by bracing the occluders such that full opening is impossible. The pressure drop through the valve is described by a two-term second-order polynomial in flow, from which it is shown that the Cd should be a nonlinear function of the flow rate through the valve. The average difference between measured and calculated areas decreased from 74%, when a constant value of 0.7 was used for the Cd, to 3.7%, when the Cd was a nonlinear function of the flow rate.