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1.
J Chem Phys ; 157(4): 044306, 2022 Jul 28.
Article in English | MEDLINE | ID: mdl-35922349

ABSTRACT

Using a magnetic bottle multi-electron time-of-flight spectrometer in combination with synchrotron radiation, double-core-hole pre-edge and continuum states involving the K-shell of the carbon atoms in n-butane (n-C4H10) have been identified, where the ejected core electron(s) and the emitted Auger electrons from the decay of such states have been detected in coincidence. An assignment of the main observed spectral features is based on the results of multi-configurational self-consistent field (MCSCF) calculations for the excitation energies and static exchange (STEX) calculations for energies and intensities. MCSCF results have been analyzed in terms of static and dynamic electron relaxation as well as electron correlation contributions to double-core-hole state ionization potentials. The analysis of applicability of the STEX method, which implements the one-particle picture toward the complete basis set limit, is motivated by the fact that it scales well toward large species. We find that combining the MCSCF and STEX techniques is a viable approach to analyze double-core-hole spectra.

2.
Phys Chem Chem Phys ; 21(19): 9889-9894, 2019 May 15.
Article in English | MEDLINE | ID: mdl-31038513

ABSTRACT

Systematic measurements on single and triple Auger decay in CO and CO2 after the creation of a C 1s or a O 1s core vacancy show that the percentage of triple Auger decay is on the order of 10-2 of the single Auger decay in these molecules. The fractions of triple Auger decay are compared with triple Auger fractions for carbon atoms and some noble gas atoms, and are found to follow a linear trend correlated to the number of valence electrons on the atom with the initial core vacancy and on its closest neighbours. This linear trend for the percentage of triple Auger decay is represented by a predictive equation TA = 0.13·Nve - 0.5.

3.
Allergy ; 72(12): 1874-1882, 2017 Dec.
Article in English | MEDLINE | ID: mdl-28464293

ABSTRACT

BACKGROUND: Ragweed pollen represents a major allergy risk factor. Ragweed extracts contain five different isoforms of the major allergen Amb a 1. However, the immunological characteristics of Amb a 1 isoforms are not fully investigated. Here, we compared the physicochemical and immunological properties of three most important Amb a 1 isoforms. METHODS: After purification, the isoforms were physicochemically characterized, tested for antibody binding and induction of human T-cell proliferative responses. Their immunological properties were further evaluated in vitro and in vivo in a mouse model. RESULTS: Amb a 1 isoforms exhibited distinct patterns of IgE binding and immunogenicity. Compared to Amb a 1.02 or 03 isoforms, Amb a 1.01 showed higher IgE-binding activity. Isoforms 01 and 03 were the most potent stimulators of patients' T cells. In a mouse model of immunization, Amb a 1.01 induced higher levels of IgG and IgE antibodies when compared to isoforms 02 and 03. Interestingly, ragweed-sensitized patients also displayed an IgG response to Amb a 1 isoforms. However, unlike therapy-induced antibodies, sensitization-induced IgG did not show IgE-blocking activity. CONCLUSION: The present study showed that naturally occurring isoforms of Amb a 1 possess different immunogenic and sensitizing properties. These findings should be considered when selecting sequences for molecule-based diagnosis and therapy for ragweed allergy. Due to its high IgE-binding activity, isoform Amb a 1.01 should be included in diagnostic tests. In contrast, due to their limited B- and T-cell cross-reactivity patterns, a combination of different isoforms might be a more attractive strategy for ragweed immunotherapy.


Subject(s)
Allergens/immunology , Ambrosia/immunology , Antigens, Plant/immunology , Phenotype , Plant Proteins/immunology , Rhinitis, Allergic, Seasonal/diagnosis , Rhinitis, Allergic, Seasonal/immunology , Siblings , Allergens/chemistry , Ambrosia/chemistry , Animals , Antigens, Plant/chemistry , Cross Reactions/immunology , Disease Models, Animal , Female , Humans , Immune Sera/immunology , Immunoglobulin E/immunology , Immunoglobulin G/immunology , Mice , Plant Extracts/chemistry , Plant Extracts/immunology , Plant Proteins/chemistry , Protein Isoforms , T-Lymphocytes/immunology , T-Lymphocytes/metabolism
4.
Clin Exp Allergy ; 46(11): 1474-1483, 2016 11.
Article in English | MEDLINE | ID: mdl-27376790

ABSTRACT

BACKGROUND: Cross-reactive apple allergy is a common co-morbidity of birch pollen allergy, caused by the presence of a Bet v 1 homologue allergen in apple, Mal d 1. Treatment of tree pollen hay fever by immunotherapy is well established, but its effect on the accompanying apple allergy is debated. OBJECTIVE: To establish a mouse model of birch pollen induced cross-reactivity to Mal d 1 and investigate the effect of birch pollen immunotherapy on the cross-reactivity to Mal d 1. METHODS: Respiratory allergy was induced in Balb/c mice by intraperitoneal exposure to alum-adsorbed birch pollen extract (BPE) in combination with short or prolonged intranasal exposure to BPE. To evaluate the response to Mal d 1, mice were exposed intraperitoneally to Mal d 1. Immunoglobulin responses and cytokine production by splenocytes were measured by ELISA. Allergic symptoms were evaluated by measuring airway hyper-reactivity and hypothermia as a surrogate marker for anaphylaxis. Immunotherapy was performed subcutaneously with alum-adsorbed BPE. RESULTS: Mice exposed to BPE develop cross-reactive IgE to Mal d 1. Early after exposure to BPE, this response is still weak and does not yet translate into anaphylaxis. Interestingly, later re-challenge with BPE increased cross-reactivity to a level where Mal d 1 exposure induced anaphylaxis. Cross-sensitization can also be induced by systemic Mal d 1 exposure. Birch pollen immunotherapy significantly reduced the anaphylactic response of mice to Mal d 1. CONCLUSION & CLINICAL RELEVANCE: A mouse model mimicking birch pollen induced cross-reactivity to Mal d 1 was successfully established. In this model, birch pollen immunotherapy significantly ameliorated the anaphylaxis induced by Mal d 1. Our experimental data suggest that boosting of Mal d 1 recognizing immunoglobulins by BP SCIT is important for the amelioration of apple allergy in human.


Subject(s)
Allergens/immunology , Anaphylaxis/immunology , Antigens, Plant/immunology , Betula/adverse effects , Cross Reactions/immunology , Desensitization, Immunologic , Malus/adverse effects , Plant Proteins/immunology , Pollen/immunology , Anaphylaxis/blood , Animals , Biomarkers , Disease Models, Animal , Female , Immunization , Immunoglobulin E/blood , Immunoglobulin E/immunology , Immunosuppression Therapy , Mice , Spleen/immunology , T-Lymphocytes/immunology , T-Lymphocytes/metabolism
5.
Allergy ; 70(10): 1201-11, 2015 Oct.
Article in English | MEDLINE | ID: mdl-26186076

ABSTRACT

It is estimated that pollen allergies affect approximately 40% of allergic individuals. In general, tree pollen allergies are mainly elicited by allergenic trees belonging to the orders Fagales, Lamiales, Proteales, and Pinales. Over 25 years ago, the gene encoding the major birch pollen allergen Bet v 1 was the first such gene to be cloned and its product characterized. Since that time, 53 tree pollen allergens have been identified and acknowledged by the WHO/IUIS allergen nomenclature subcommittee. Molecule-based profiling of allergic sensitization has helped to elucidate the immunological connections of allergen cross-reactivity, whereas advances in biochemistry have revealed structural and functional aspects of allergenic proteins. In this review, we provide a comprehensive overview of the present knowledge of the molecular aspects of tree pollen allergens. We analyze the geographic distribution of allergenic trees, discuss factors pivotal for allergic sensitization, and describe the role of tree pollen panallergens. Novel allergenic tree species as well as tree pollen allergens are continually being identified, making research in this field highly competitive and instrumental for clinical applications.


Subject(s)
Allergens/immunology , Antigens, Plant/immunology , Pollen/immunology , Trees/adverse effects , Humans , Plant Proteins/immunology , Rhinitis, Allergic, Seasonal/immunology , Trees/classification
6.
Clin Exp Allergy ; 44(3): 438-49, 2014 Mar.
Article in English | MEDLINE | ID: mdl-24330218

ABSTRACT

BACKGROUND: Trees belonging to the order of Fagales show a distinct geographical distribution. While alder and birch are endemic in the temperate zones of the Northern Hemisphere, hazel, hornbeam and oak prefer a warmer climate. However, specific immunotherapy of Fagales pollen-allergic patients is mainly performed using birch pollen extracts, thus limiting the success of this intervention in birch-free areas. OBJECTIVES: T cells are considered key players in the modification of an allergic immune response during specific immunotherapy (SIT), therefore we thought to combine linear T cell epitope-containing stretches of the five most important Fagales allergens from birch, hazel, alder, oak and hornbeam resulting in a Fagales pollen hybrid (FPH) molecule applicable for SIT. METHODS: A Fagales pollen hybrid was generated by PCR-based recombination of low IgE-binding allergen epitopes. Moreover, a structural-variant FPH4 was calculated by in silico mutagenesis, rendering the protein unable to adopt the Bet v 1-like fold. Both molecules were produced in Escherichia coli, characterized physico-chemically as well as immunologically, and tested in mouse models of allergic sensitization as well as allergy prophylaxis. RESULTS: Using spectroscopic analyses, both proteins were monomeric, and the secondary structure elements of FPH resemble the ones typical for Bet v 1-like proteins, whereas FPH4 showed increased amounts of unordered structure. Both molecules displayed reduced binding capacities of Bet v 1-specific IgE antibodies. However, in a mouse model, the proteins were able to induce high IgG titres cross-reactive with all parental allergens. Moreover, prophylactic treatment with the hybrid proteins prevented pollen extract-induced allergic lung inflammation in vivo. CONCLUSION: The hybrid molecules showed a more efficient uptake and processing by dendritic cells resulting in a modified T cell response. The proteins had a lower IgE-binding capacity compared with the parental allergens, thus the high safety profile and increased efficacy emphasize clinical application for the treatment of Fagales multi-sensitization.


Subject(s)
Allergens/immunology , Immunotherapy , Pollen/immunology , Recombinant Fusion Proteins/immunology , Rhinitis, Allergic, Seasonal/therapy , Tracheophyta/adverse effects , Vaccines/immunology , Allergens/chemistry , Allergens/genetics , Amino Acid Sequence , Animals , Cross Reactions/immunology , Dendritic Cells/immunology , Epitopes/chemistry , Epitopes/genetics , Epitopes/immunology , Epitopes/metabolism , Female , Humans , Immunization , Immunization Schedule , Immunoglobulin E/immunology , Immunoglobulin E/metabolism , Immunoglobulin G/immunology , Mice , Molecular Sequence Data , Protein Binding/immunology , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Rhinitis, Allergic, Seasonal/immunology , Sequence Alignment , Spleen/cytology , Spleen/immunology
7.
Clin Exp Allergy ; 44(8): 1083-93, 2014 Aug.
Article in English | MEDLINE | ID: mdl-24979350

ABSTRACT

BACKGROUND: Birch pollen allergy represents the main cause of winter and spring pollinosis in the temperate climate zone of the northern hemisphere and sensitization towards Bet v 1, the major birch pollen allergen, affects over 100 million allergic patients. The major birch pollen allergen Bet v 1 has been described as promiscuous acceptor for a wide variety of hydrophobic ligands. OBJECTIVE: In search of intrinsic properties of Bet v 1, which account responsible for the high allergenic potential of the protein, we thought to investigate the effects of ligand-binding on immunogenic as well as allergenic properties. METHODS: As surrogate ligand of Bet v 1 sodium deoxycholate (DOC) was selected. Recombinant and natural Bet v 1 were characterised physico-chemically as well as immunologically in the presence or absence of DOC, and an animal model of allergic sensitization was established. Moreover, human IgE binding to Bet v 1 was analysed by nuclear magnetic resonance (NMR) spectroscopy. RESULTS: Ligand-binding had an overall stabilizing effect on Bet v 1. This translated in a Th2 skewing of the immune response in a mouse model. Analyses of human IgE binding on Bet v 1 in mediator release assays revealed that ligand-bound allergen-induced degranulation at lower concentrations; however, in basophil activation tests with human basophils ligand-binding did not show this effect. For the first time, human IgE epitopes on Bet v 1 were determined using antibodies isolated from patients' sera. The IgE epitope mapping of Bet v 1 demonstrated the presence of multiple binding regions. CONCLUSIONS AND CLINICAL RELEVANCE: Deoxycholate binding stabilizes conformational IgE epitopes on Bet v 1; however, the epitopes themselves remain unaltered. Therefore, we speculate that humans are exposed to both ligand-bound and free Bet v 1 during sensitization, disclosing the ligand-binding cavity of the allergen as key structural element.


Subject(s)
Allergens/immunology , Antigens, Plant/immunology , Betula/adverse effects , Pollen/immunology , Rhinitis, Allergic, Seasonal/immunology , Allergens/chemistry , Allergens/metabolism , Animals , Antigens, Plant/chemistry , Antigens, Plant/metabolism , Basophil Degranulation Test , Basophils/immunology , Cell Degranulation/immunology , Cell Line , Deoxycholic Acid/chemistry , Deoxycholic Acid/metabolism , Disease Models, Animal , Epitope Mapping , Epitopes/immunology , Female , Humans , Immunization , Immunoglobulin E/immunology , Immunoglobulin E/isolation & purification , Ligands , Mice , Models, Molecular , Protein Binding , Protein Conformation , Protein Stability , Recombinant Proteins/chemistry , Recombinant Proteins/immunology , Recombinant Proteins/metabolism , Thermodynamics
8.
Allergy ; 69(2): 208-15, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24224690

ABSTRACT

BACKGROUND: Birch pollen allergies are frequently associated with adverse reactions to various fruits, nuts, or vegetables, described as pollen-food syndrome (PFS) and caused by cross-reactive IgE antibodies primarily directed against Bet v 1. Specific immunotherapy (SIT) represents an effective treatment for inhalant allergies; however, successful birch pollen SIT does not correlate well with the amelioration of concomitant food allergies. METHODS: As vaccine candidates, apple Mal d 1 as well as hazelnut Cor a 1 derivatives were designed by in silico backbone analyses of the respective allergens. The proteins were produced by site-directed mutagenesis as fold variants of their parental allergens. Because Mal d 1 and Cor a 1 form cysteine-mediated aggregates, nonaggregative cysteine to serine mutants were also generated. The proteins were characterized physicochemically, immunologically, and in in vivo models with or without adjuvant. RESULTS: The structurally modified proteins showed significantly decreased IgE binding capacity. Notably, both in vivo models revealed reduced immunogenicity of the hypoallergenic fold variants. When formulated with alum, the monomeric cysteine mutants induced a similar immune response as the aggregated parental allergens, which is in contrast with data published on Bet v 1. CONCLUSION: These findings lead to the suggestion that the Bet v 1 structure has unique intrinsic properties, which could account for its high allergenicity. Obviously, these characteristics are not entirely shared with its food homologues from apple and hazelnut. Thus, it is important to tackle pollen-related food allergies from different angles for the generation of effective vaccine candidates to treat birch PFS.


Subject(s)
Allergens/chemistry , Allergens/immunology , Antigens, Plant/immunology , Food Hypersensitivity/immunology , Animals , Antigens, Plant/chemistry , Cross Reactions/immunology , Enzyme-Linked Immunosorbent Assay , Female , Humans , Mice , Mice, Inbred BALB C , Mutagenesis, Site-Directed , Plant Proteins/chemistry , Plant Proteins/immunology , Protein Structure, Secondary , Recombinant Proteins/chemistry , Recombinant Proteins/immunology
9.
Neurochem Res ; 39(6): 1118-26, 2014 Jun.
Article in English | MEDLINE | ID: mdl-24500446

ABSTRACT

GABAA receptors (GABARs) have long been the focus for acute alcohol actions with evidence for behaviorally relevant low millimolar alcohol actions on tonic GABA currents and extrasynaptic α4/6, δ, and ß3 subunit-containing GABARs. Using recombinant expression in oocytes combined with two electrode voltage clamp, we show with chimeric ß2/ß3 subunits that differences in alcohol sensitivity among ß subunits are determined by the extracellular N-terminal part of the protein. Furthermore, by using point mutations, we show that the ß3 alcohol selectivity is determined by a single amino acid residue in the N-terminus that differs between GABAR ß subunits (ß3Y66, ß2A66, ß1S66). The ß3Y66 residue is located in a region called "loop D" which in γ subunits contributes to the imidazobenzodiazepine (iBZ) binding site at the classical α+γ2- subunit interface. In structural homology models ß3Y66 is the equivalent of γ2T81 which is one of three critical residues lining the benzodiazepine binding site in the γ2 subunit loop D, opposite to the "100H/R-site" benzodiazepine binding residue in GABAR α subunits. We have shown that the α6R100Q mutation at this site leads to increased alcohol-induced motor in-coordination in alcohol non-tolerant rats carrying the α6R100Q mutated allele. Based on the identification of these two amino acid residues α6R100 and ß66 we propose a model in which ß3 and δ containing GABA receptors contain a unique ethanol site at the α4/6+ß3- subunit interface. This site is homologous to the classical benzodiazepine binding site and we propose that it not only binds ethanol at relevant concentrations (EC50-17 mM), but also has high affinity for a few selected benzodiazepine site ligands including alcohol antagonistic iBZs (Ro15-4513, RY023, RY024, RY80) which have in common a large moiety at the C7 position of the benzodiazepine ring. We suggest that large moieties at the C7-BZ ring compete with alcohol for its binding pocket at a α4/6+ß3- EtOH/Ro15-4513 site. This model reconciles many years of alcohol research on GABARs and provides a plausible explanation for the competitive relationship between ethanol and iBZ alcohol antagonists in which bulky moieties at the C7 position compete with ethanol for its binding site. We conclude with a critical discussion to suggest that much of the controversy surrounding this issue might be due to fundamental species differences in alcohol and alcohol antagonist responses in rats and mice.


Subject(s)
Azides/metabolism , Benzodiazepines/metabolism , Ethanol/pharmacology , Extracellular Fluid/metabolism , Protein Subunits/metabolism , Receptors, GABA-A/metabolism , Animals , Benzodiazepines/chemistry , Binding Sites/drug effects , Binding Sites/physiology , Dose-Response Relationship, Drug , Extracellular Fluid/drug effects , Female , Protein Structure, Secondary , Protein Subunits/chemistry , Rats , Receptors, GABA-A/chemistry , Xenopus laevis
10.
Herz ; 38(4): 431-4, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23263246

ABSTRACT

INTRODUCTION: In October 2011, a 72-year-old man was referred from a peripheral hospital with subsequent diagnosis: fungal sepsis with suspicion for endocarditis of a bioprosthetic aortic heart valve. In May 2010, a bioprosthetic aortic valve implantation (Edwards Magna) and CABG (LIMA graft on LAD) were performed. CASE: At the time of admission, the patient was in good general condition; the physical examination was unremarkable. Hemoculture detected Streptococci thermophilus and Candida parapsilosis. Neither an oscillating intracardiac mass on the valve nor an abscess could be detected in several transesophageal echocardiographies (TEEs). The F(18)-FDG PET-CT showed an increased tracer uptake in the area of the prosthetic aortic valve. The findings argued for a fungal endocarditis of the prosthetic aortic valve. Heart surgeons refrained from implantation of a new prosthetic aortic valve because of the unfavorable prognosis. Therefore, high-dose i.v. therapy with liposomale amphotericin B (5 mg/kg BW) and voriconazol (4 mg/kg BW twice a day) was started. A new F(18)-FDG PET-CT after 2 weeks showed no tracer uptake in the area of the prosthetic aortic valve. The hemoculture was also negative. The patient recovered; CRP values were within normal limits. Life-long antifungal therapy with fluconazol (400 mg/day) was recommended. CONCLUSION: There are no definitive treatment recommendations for fungal endocarditis. Surgical therapy is the first choice in prosthetic valve endocarditis, which however cannot be performed in all patients. In these cases high dose and life-long medical therapy is necessary to prevent re-infection of the valve, even if (transient) deterioration of renal and liver function occurs.


Subject(s)
Antifungal Agents/therapeutic use , Bioprosthesis/adverse effects , Candidiasis/drug therapy , Candidiasis/etiology , Endocarditis/drug therapy , Endocarditis/etiology , Heart Valve Prosthesis/adverse effects , Aged , Candidiasis/diagnosis , Endocarditis/diagnosis , Humans , Male , Treatment Outcome
11.
Clin Exp Allergy ; 42(12): 1697-723, 2012 Dec.
Article in English | MEDLINE | ID: mdl-23181787

ABSTRACT

As in previous years, we felt it would be of value to our readership to summarize the new information provided by the authors who have published in Clinical and Experimental Allergy in 2011 and set this in the context of recent advances in our understanding of the pathogenesis and management of allergic disease in all its many manifestations. In 2011, about 210 articles were published in Clinical and Experimental Allergy including editorials, reviews, opinion articles, guidelines, letters, book reviews and of course at the heart of the journal, papers containing original data. As before, this review is divided into sections based on the way the journal is structured, although this year we have grouped together all the papers dealing with mechanisms of allergic disease, whether they involve patients (clinical mechanisms), pure in vitro studies (basic mechanisms) or animal models (experimental models), as we felt this was a more coherent way to deal with the subject. In the field of asthma and rhinitis, the relationship between airway inflammation and airway dysfunction was of perennial interest to investigators, as were phenotypes and biomarkers. Aspirin hypersensitivity appeared in studies in several papers and there was new interest in asthma in the elderly. The mechanisms involved in allergic disease describe advances in our understanding of T cell responses, the relationship between inflammation and disease, mast cell and basophil activation, steroid resistance and novel therapies. In the section dealing with epidemiology, studies seeking to identify risk factors for allergic disease including vitamin D are prominent, as once again are studies investigating gene-environment interactions. The clinical allergy section focuses on drug allergy, food allergy and immunotherapy. The area of oral immunotherapy for food allergy is well covered and we were grateful to Stephen Durham for guest editing an outstanding special issue on immunotherapy in the centenary year of Leonard Noon's pioneering work. Lastly, in the field of allergens, the interest in component-resolved diagnosis continues to grow and there are also articles describing important novel cultivars and the effect of food processing on the allergenic properties of foods. Another terrific year, full of important and high-quality work,which the journal has been proud to bring to the allergy community.


Subject(s)
Asthma/physiopathology , Asthma/therapy , Hypersensitivity/physiopathology , Hypersensitivity/therapy , Aged , Allergens/immunology , Allergens/therapeutic use , Animals , Asthma/immunology , Child , Child, Preschool , Disease Models, Animal , Female , Humans , Hypersensitivity/diagnosis , Hypersensitivity/immunology , Immunotherapy , Infant , Male , Middle Aged
12.
Allergy ; 67(11): 1375-82, 2012 Nov.
Article in English | MEDLINE | ID: mdl-22973879

ABSTRACT

BACKGROUND: BM4 is a novel genetically engineered variant of the major birch pollen allergen Bet v 1 that lacks the typical Bet v 1-like fold and displays negligible IgE-binding but strong T cell-activating capacity. The aim of this study was to elucidate possible differences between BM4 and Bet v 1 in internalization, antigen processing, and presentation. METHODS: Proliferative responses to BM4 and Bet v 1 of peripheral blood mononuclear cells and Bet v 1-specific T-cell clones were compared. Fluorescently labeled BM4 and Bet v 1 were used to study surface binding, endocytosis, and intracellular degradation by monocyte-derived DC (mdDC). Both proteins were digested by endolysosomal extracts of mdDC. BM4- and Bet v 1-pulsed mdDC were employed to assess the kinetics of activation of Bet v 1-specific T-cell clones and the polarization of naïve T cells. RESULTS: BM4 displayed a significantly stronger T cell-activating capacity than Bet v 1. Furthermore, BM4 showed increased surface binding and internalization as well as faster endolysosomal degradation compared with Bet v 1. BM4-pulsed mdDC induced enhanced proliferative responses at earlier time-points in Bet v 1-specific T-cell clones and promoted less IL-5 production in T cells than Bet v 1-pulsed mdDC. CONCLUSION: The loss of the Bet v 1-fold changes the protein's interaction with the human immune system at the level of antigen-presenting cells resulting in altered T-cell responses. By combining low IgE-binding with strong and modulating T cell-activating capacity, BM4 represents a highly interesting candidate for specific immunotherapy of birch pollen allergy.


Subject(s)
Allergens/immunology , Antigen Presentation , Antigens, Plant/immunology , Betula/immunology , Lymphocyte Activation , Pollen/immunology , T-Lymphocytes/immunology , Amino Acid Sequence , Antigens, Plant/chemistry , Antigens, Plant/metabolism , Cell Polarity , Humans , Molecular Sequence Data
13.
Mutagenesis ; 27(6): 731-5, 2012 Nov.
Article in English | MEDLINE | ID: mdl-22874647

ABSTRACT

Circulating unconjugated bilirubin (UCB) has been reported to protect against lung and colorectal cancer. The present study aimed to explore, for the first time, whether mildly elevated circulating UCB, as found in Gilbert`s syndrome (GS), is associated with changes of DNA damage. A random 76 individuals, matched for age and gender, were recruited from the general population and allocated into the GS group (UCB ≥ 17.1 µM; n = 38) or control group (UCB <17.1 µM; n = 38). Chromosomal and cytological changes were determined in lymphocytes and buccal cells using the cytokinesis-block micronucleus cytome assay (CBMN) and buccal micronucleus cytome assay (BMcyt). No significant differences were found between GS subjects and the control group in the CBMN and BMcyt determined endpoints. Subsequently, when age dependency of effects were analysed, lower formation of buccal micronucleated cells (by 73.3%) and buccal nuclear buds (by 70.9%) in the GS subgroup ≥ 30 years were found, compared to the GS subgroup <30 years. These findings suggest DNA protection in epithelial tissue of older individuals with GS.


Subject(s)
Bilirubin/blood , Chromosome Aberrations , Comet Assay/methods , Gilbert Disease/genetics , Micronucleus Tests/methods , Adult , Aged , Aged, 80 and over , Bilirubin/adverse effects , Colorectal Neoplasms/pathology , Cytokinesis , DNA Damage , Endpoint Determination , Female , Folic Acid/blood , Gilbert Disease/blood , Homocysteine/blood , Humans , Lung Neoplasms/pathology , Lymphocytes/pathology , Male , Middle Aged , Vitamin B 12/blood , Young Adult
14.
Nat Commun ; 13(1): 198, 2022 01 11.
Article in English | MEDLINE | ID: mdl-35017539

ABSTRACT

The conversion of photon energy into other energetic forms in molecules is accompanied by charge moving on ultrafast timescales. We directly observe the charge motion at a specific site in an electronically excited molecule using time-resolved x-ray photoelectron spectroscopy (TR-XPS). We extend the concept of static chemical shift from conventional XPS by the excited-state chemical shift (ESCS), which is connected to the charge in the framework of a potential model. This allows us to invert TR-XPS spectra to the dynamic charge at a specific atom. We demonstrate the power of TR-XPS by using sulphur 2p-core-electron-emission probing to study the UV-excited dynamics of 2-thiouracil. The method allows us to discover that a major part of the population relaxes to the molecular ground state within 220-250 fs. In addition, a 250-fs oscillation, visible in the kinetic energy of the TR-XPS, reveals a coherent exchange of population among electronic states.

15.
Clin Exp Allergy ; 41(12): 1804-14, 2011 Dec.
Article in English | MEDLINE | ID: mdl-22092996

ABSTRACT

BACKGROUND: In the temperate climate zone of the Northern hemisphere, Fagales pollen allergy represents the main cause of winter/spring pollinosis. Among Fagales trees, pollen allergies are strongly associated within the Betulaceae and the Fagaceae families. It is widely accepted that Fagales pollen allergies are initiated by sensitization against Bet v 1, the birch pollen major allergen, although evidence is accumulating that the allergenic activity of some Bet v 1-like molecules has been underestimated. OBJECTIVE: To investigate the allergenic potential of the clinically most important Fagales pollen allergens from birch, alder, hazel, hornbeam, hop-hornbeam, oak, beech and chestnut. METHODS: To obtain the full spectrum of allergens, the three previously unavailable members of the Bet v 1-family, hop-hornbeam Ost c 1, chestnut Cas s 1 and beech Fag s 1, were identified in the respective pollen extracts, cloned and produced as recombinant proteins in E. coli. Together with recombinant Bet v 1, Aln g 1, Car b 1, Cor a 1 and Que a 1, the molecules were characterized physicochemically, mediator release assays were performed and IgE cross-reactivity was evaluated by ELISA and Immuno Solid-phase Allergen Chip (ISAC) IgE inhibition assays. RESULTS: All allergens showed the typical Bet v 1-like secondary structure elements, and they were all able to bind serum IgE from Fagales allergic donors. Strong IgE binding was observed for Betuloideae and Coryloideae allergens, however, cross-reactivity between the two subfamilies was limited as explored by inhibition experiments. In contrast, IgE binding to members of the Fagaceae could be strongly inhibited by serum pre-incubation with allergens of the Betuloideae subfamily. CONCLUSIONS AND CLINICAL RELEVANCE: The data suggest that Bet v 1-like allergens of the Betuloideae and Coryloideae subfamily might have the potential to induce IgE antibodies with different specificities, while allergic reactions towards Fagaceae allergens are the result of IgE cross-reactivity.


Subject(s)
Antigens, Plant/immunology , Hypersensitivity, Immediate/immunology , Magnoliopsida/immunology , Pollen/immunology , Adolescent , Adult , Aged , Amino Acid Sequence , Antigens, Plant/chemistry , Antigens, Plant/genetics , Child , Cross Reactions/immunology , Female , Humans , Immunoglobulin E/blood , Immunoglobulin E/immunology , Immunoglobulin E/metabolism , Male , Middle Aged , Molecular Sequence Data , Pollen/metabolism , Protein Binding/immunology , Protein Structure, Secondary , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/immunology , Sequence Alignment , Young Adult
16.
Allergy ; 66(7): 870-7, 2011 Jul.
Article in English | MEDLINE | ID: mdl-21309790

ABSTRACT

BACKGROUND: Kiwifruit is an important cause of food allergy. A high amount of a protein with a molecular mass compatible with that of Bet v 1 was observed in the kiwifruit extract. OBJECTIVE: To identify and characterize kirola, the 17-kDa protein of green kiwifruit (Act d 11). METHODS: Act d 11 was purified from green kiwifruit. Its primary structure was obtained by direct protein sequencing. The IgE binding was investigated by skin testing, immunoblotting, inhibition tests, and detection by the ISAC microarray in an Italian cohort and in selected Bet v 1-sensitized Austrian patients. A clinical evaluation of kiwi allergy was carried out. RESULTS: Act d 11 was identified as a member of the major latex protein/ripening-related protein (MLP/RRP) family. IgE binding to Act d 11 was shown by all the applied testing. Patients tested positive for Act d 11 and reporting symptoms on kiwifruit exposure were found within the Bet v 1-positive subset rather than within the population selected for highly reliable history of allergic reactions to kiwifruit. Epidemiology of Act d 11 IgE reactivity was documented in the two cohorts. IgE co-recognition of Act d 11 within the Bet v 1-like molecules is documented using the microarray IgE inhibition assay. CONCLUSIONS: Act d 11 is the first member of the MLP/RRP protein family to be described as an allergen. It displays IgE co-recognition with allergens belonging to the PR-10 family, including Bet v 1.


Subject(s)
Actinidia/immunology , Allergens/immunology , Food Hypersensitivity/etiology , Fruit/immunology , Plant Proteins/immunology , Actinidia/adverse effects , Adolescent , Adult , Aged , Allergens/adverse effects , Allergens/chemistry , Amino Acid Sequence , Antigens, Plant/chemistry , Antigens, Plant/immunology , Austria/epidemiology , Child , Child, Preschool , Female , Food Hypersensitivity/epidemiology , Food Hypersensitivity/immunology , Food Hypersensitivity/physiopathology , Fruit/adverse effects , Humans , Immunoglobulin E/blood , Italy/epidemiology , Male , Middle Aged , Molecular Sequence Data , Plant Proteins/chemistry , Sequence Alignment , Skin Tests , Young Adult
17.
Sci Rep ; 11(1): 17137, 2021 Aug 24.
Article in English | MEDLINE | ID: mdl-34429456

ABSTRACT

Using multi-electron-ion coincidence measurements combined with high level calculations, we show that double ionisation of SO2 at 40.81 eV can be state selective. It leads to high energy products, in good yield, via a newly identified mechanism, which is likely to apply widely to multiple ionisation by almost all impact processes.

19.
Sci Rep ; 10(1): 1246, 2020 Jan 27.
Article in English | MEDLINE | ID: mdl-31988321

ABSTRACT

L-shell ionisation and subsequent Coulomb explosion of fully deuterated methyl iodide, CD3I, irradiated with hard X-rays has been examined by a time-of-flight multi-ion coincidence technique. The core vacancies relax efficiently by Auger cascades, leading to charge states up to 16+. The dynamics of the Coulomb explosion process are investigated by calculating the ions' flight times numerically based on a geometric model of the experimental apparatus, for comparison with the experimental data. A parametric model of the explosion, previously introduced for multi-photon induced Coulomb explosion, is applied in numerical simulations, giving good agreement with the experimental results for medium charge states. Deviations for higher charges suggest the need to include nuclear motion in a putatively more complete model. Detection efficiency corrections from the simulations are used to determine the true distributions of molecular charge states produced by initial L1, L2 and L3 ionisation.

20.
Sci Rep ; 10(1): 2288, 2020 Feb 10.
Article in English | MEDLINE | ID: mdl-32042092

ABSTRACT

Double and triple ionisation spectra of the reactive molecule isocyanic acid (HNCO) have been measured using multi-electron and ion coincidence techniques combined with synchrotron radiation and compared with high-level theoretical calculations. Vertical double ionisation at an energy of 32.8 ± 0.3 eV forms the 3A" ground state in which the HNCO2+ ion is long lived. The vertical triple ionisation energy is determined as 65 ± 1 eV. The core-valence double ionisation spectra resemble the valence photoelectron spectrum in form, and their main features can be understood on the basis of a simple and rather widely applicable Coulomb model based on the characteristics of the molecular orbitals from which electrons are removed. Characteristics of the most important dissociation channels are examined and discussed.

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