Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 71
Filter
Add more filters

Country/Region as subject
Publication year range
1.
Brief Bioinform ; 25(2)2024 Jan 22.
Article in English | MEDLINE | ID: mdl-38426323

ABSTRACT

Most sequencing-based spatial transcriptomics (ST) technologies do not achieve single-cell resolution where each captured location (spot) may contain a mixture of cells from heterogeneous cell types, and several cell-type decomposition methods have been proposed to estimate cell type proportions of each spot by integrating with single-cell RNA sequencing (scRNA-seq) data. However, these existing methods did not fully consider the effect of distribution difference between scRNA-seq and ST data for decomposition, leading to biased cell-type-specific genes derived from scRNA-seq for ST data. To address this issue, we develop an instance-based transfer learning framework to adjust scRNA-seq data by ST data to correctly match cell-type-specific gene expression. We evaluate the effect of raw and adjusted scRNA-seq data on cell-type decomposition by eight leading decomposition methods using both simulated and real datasets. Experimental results show that data adjustment can effectively reduce distribution difference and improve decomposition, thus enabling for a more precise depiction on spatial organization of cell types. We highlight the importance of data adjustment in integrative analysis of scRNA-seq with ST data and provide guidance for improved cell-type decomposition.


Subject(s)
Gene Expression Profiling , Single-Cell Gene Expression Analysis , Research Design , Sequence Analysis, RNA
2.
J Infect Dis ; 229(3): 855-865, 2024 Mar 14.
Article in English | MEDLINE | ID: mdl-37603461

ABSTRACT

BACKGROUND: Calcitonin gene-related peptide (CGRP), an immunomodulatory neuropeptide, is important for regulating pain transmission, vasodilation, and the inflammatory response. However, the molecular mechanisms of the CGRP-mediated immune response remain unknown. METHODS: The effects of CGRP on bacterial meningitis (BM) and its underlying mechanisms were investigated in BM mice in vivo and macrophages in vitro. RESULTS: Peripheral injection of CGRP attenuated cytokine storms and protected mice from fatal pneumococcal meningitis, marked by increased bacterial clearance, improved neuroethology, and reduced mortality. When the underlying mechanisms were investigated, we found that CGRP induces proteasome-dependent degradation of major histocompatibility complex class II (MHC-II) in macrophages and then inhibits CD4+ T-cell activation. MARCH1 was identified as an E3 ligase that can be induced by CGRP engagement and promote K48-linked ubiquitination and degradation of MHC-II in macrophages. These results provide new insights into neuropeptide CGRP-mediated immune regulation mechanisms. CONCLUSIONS: We conclude that targeting the nervous system and manipulating neuroimmune communication is a promising strategy for treating intracranial infections like BM.


Subject(s)
Calcitonin Gene-Related Peptide , Meningitis, Bacterial , Mice , Animals , Calcitonin Gene-Related Peptide/metabolism , Histocompatibility Antigens Class II , Ubiquitination , Major Histocompatibility Complex , Homeostasis , Ubiquitin-Protein Ligases/metabolism
3.
Hum Genomics ; 17(1): 66, 2023 07 17.
Article in English | MEDLINE | ID: mdl-37461096

ABSTRACT

BACKGROUND: Cancer predisposition is most often studied in the context of single cancers. However, inherited cancer predispositions can also give rise to multiple primary cancers. Yet, there is a paucity of studies on genetic predisposition in multiple primary cancers, especially those outside of well-defined cancer predisposition syndromes. This study aimed to identify germline variants associated with dual primary cancers of the breast and lung. METHODS: Exome sequencing was performed on germline DNA from 55 Singapore patients (52 [95%] never-smokers) with dual primaries in the breast and lung, confirmed by histopathology. Using two large control cohorts: the local SG10K_Health (n = 9770) and gnomAD non-cancer East Asians (n = 9626); and two additional local case cohorts of early-onset or familial breast cancer (n = 290), and lung cancer (n = 209), variants were assessed for pathogenicity in accordance with ACMG/AMP guidelines. In particular, comparisons were made with known pathogenic or likely pathogenic variants in the ClinVar database, pathogenicity predictions were obtained from in silico prediction software, and case-control association analyses were performed. RESULTS: Altogether, we identified 19 pathogenic or likely pathogenic variants from 16 genes, detected in 17 of 55 (31%) patients. Six of the 19 variants were identified using ClinVar, while 13 variants were classified pathogenic or likely pathogenic using ACMG/AMP guidelines. The 16 genes include well-known cancer predisposition genes such as BRCA2, TP53, and RAD51D; but also lesser known cancer genes EXT2, WWOX, GATA2, and GPC3. Most of these genes are involved in DNA damage repair, reaffirming the role of impaired DNA repair mechanisms in the development of multiple malignancies. These variants warrant further investigations in additional populations. CONCLUSIONS: We have identified both known and novel variants significantly enriched in patients with primary breast and lung malignancies, expanding the body of known cancer predisposition variants for both breast and lung cancer. These variants are mostly from genes involved in DNA repair, affirming the role of impaired DNA repair in the predisposition and development of multiple cancers.


Subject(s)
Breast Neoplasms , Lung Neoplasms , Neoplasms, Multiple Primary , Humans , Female , Breast Neoplasms/genetics , Genetic Predisposition to Disease , Germ-Line Mutation/genetics , Neoplasms, Multiple Primary/genetics , Lung Neoplasms/genetics , Germ Cells , Glypicans/genetics
4.
Int J Mol Sci ; 25(8)2024 Apr 20.
Article in English | MEDLINE | ID: mdl-38674099

ABSTRACT

In agriculture, soil-borne fungal pathogens, especially Fusarium oxysporum strains, are posing a serious threat to efforts to achieve global food security. In the search for safer agrochemicals, silica nanoparticles (SiO2NPs) have recently been proposed as a new tool to alleviate pathogen damage including Fusarium wilt. Hollow mesoporous silica nanoparticles (HMSNs), a unique class of SiO2NPs, have been widely accepted as desirable carriers for pesticides. However, their roles in enhancing disease resistance in plants and the specific mechanism remain unknown. In this study, three sizes of HMSNs (19, 96, and 406 nm as HMSNs-19, HMSNs-96, and HMSNs-406, respectively) were synthesized and characterized to determine their effects on seed germination, seedling growth, and Fusarium oxysporum f. sp. phaseoli (FOP) suppression. The three HMSNs exhibited no side effects on cowpea seed germination and seedling growth at concentrations ranging from 100 to 1500 mg/L. The inhibitory effects of the three HMSNs on FOP mycelial growth were very weak, showing inhibition ratios of less than 20% even at 2000 mg/L. Foliar application of HMSNs, however, was demonstrated to reduce the FOP severity in cowpea roots in a size- and concentration-dependent manner. The three HMSNs at a low concentration of 100 mg/L, as well as HMSNs-19 at a high concentration of 1000 mg/L, were observed to have little effect on alleviating the disease incidence. HMSNs-406 were most effective at a concentration of 1000 mg/L, showing an up to 40.00% decline in the disease severity with significant growth-promoting effects on cowpea plants. Moreover, foliar application of HMSNs-406 (1000 mg/L) increased the salicylic acid (SA) content in cowpea roots by 4.3-fold, as well as the expression levels of SA marker genes of PR-1 (by 1.97-fold) and PR-5 (by 9.38-fold), and its receptor gene of NPR-1 (by 1.62-fold), as compared with the FOP infected control plants. Meanwhile, another resistance-related gene of PAL was also upregulated by 8.54-fold. Three defense-responsive enzymes of POD, PAL, and PPO were also involved in the HMSNs-enhanced disease resistance in cowpea roots, with varying degrees of reduction in activity. These results provide substantial evidence that HMSNs exert their Fusarium wilt suppression in cowpea plants by activating SA-dependent SAR (systemic acquired resistance) responses rather than directly suppressing FOP growth. Overall, for the first time, our results indicate a new role of HMSNs as a potent resistance inducer to serve as a low-cost, highly efficient, safe and sustainable alternative for plant disease protection.


Subject(s)
Disease Resistance , Fusarium , Germination , Nanoparticles , Plant Diseases , Seedlings , Silicon Dioxide , Fusarium/drug effects , Silicon Dioxide/chemistry , Plant Diseases/microbiology , Plant Diseases/prevention & control , Nanoparticles/chemistry , Germination/drug effects , Disease Resistance/drug effects , Seedlings/growth & development , Seedlings/drug effects , Seedlings/microbiology , Vigna/microbiology , Vigna/growth & development , Vigna/drug effects , Porosity
5.
Br J Neurosurg ; 37(6): 1843-1849, 2023 Dec.
Article in English | MEDLINE | ID: mdl-34184598

ABSTRACT

BACKGROUND: Charcot arthropathy, also known as neuropathic arthropathy, is a rare disease whose early diagnosis and treatment are very difficult. Generally, diabetes is considered the most common cause of Charcot arthropathy. Although Charcot arthropathy of other secondary etiology has been reported, in most cases only a single joint is accumulated, and rarely involving the feet and shoulders. Clinically, Charcot arthropathy due to delayed diagnosis leads to joint destruction and severe cases abound. CASE PRESENTATION: What we report is an unprecedented case, in which the patient was diagnosed as left shoulder joint, interdigital joint Charcot arthropathy caused by cervical spondylotic myelopathy (CSM) and left knee and right ankle Charcot arthropathy caused by adult degenerative scoliosis (ADS) complicated by syringomyelia. The 82-year-old male patient was admitted to the hospital for complaining of pain in the left knee joint. Except for scoliosis that was discovered 10 years ago, the patient denied any other obvious past medical history. Clinical/surgical manifestations, detailed physical examinations and auxiliary examinations all indicated the presence of polyarticular Charcot arthropathy, but common causes of Charcot arthropathy such as diabetes and syphilis have not been detected. After making a comprehensive differential diagnosis, we finally made the above diagnosis. CONCLUSIONS: This previously unreported case describes the complexity and etiological diversity of Charcot arthropathy. We recommend that patients with CSM and/or scoliosis, spinal deformity undergo further examination and regular follow-up. A detailed medical history and careful physical examination are necessary for the correct diagnosis of Charcot arthropathy. Although the early diagnosis of Charcot arthropathy cannot change the natural course of the disease, it is beneficial to alleviate symptoms and prevent serious complications.


Subject(s)
Arthropathy, Neurogenic , Diabetes Mellitus , Scoliosis , Shoulder Joint , Syringomyelia , Male , Humans , Adult , Aged, 80 and over , Syringomyelia/complications , Syringomyelia/diagnostic imaging , Syringomyelia/surgery , Scoliosis/complications , Scoliosis/diagnostic imaging , Arthropathy, Neurogenic/diagnostic imaging , Arthropathy, Neurogenic/etiology
6.
Chem Biodivers ; 19(4): e202100973, 2022 Apr.
Article in English | MEDLINE | ID: mdl-35170193

ABSTRACT

Finding agriculturally active compounds from nature or finding active lead compounds from natural products, artificial synthesis and structural modification are the main ways to create new agrochemical. In order to explore the agricultural activities of Chonemorpha splendens Chun et Tsiang (C. splendens), an important medicinal plant, the antioxidant activities and allelopathic potential were investigated. C. splendens was extracted with methanol, then, C. splendens methanol extract (CSME) were extracted with petroleum ether, chloroform, ethyl acetate and butanol. Reducing activity, lipid peroxidation, and the scavenging abilities for DPPH⋅, O2 -. , HO⋅, and H2 O2 were also measured and allelopathic potentials were evaluated by bioassay method. GC/MS analysis revealed that esters were the main component (66.34 %) of CSME, the total CSME flavonoid content was 313 mg g-1 (rutin equivalent). The chloroform phase of CSME was identified as stigmasterol by NMR for the first time. The DPPH⋅ scavenging rate of CSME was 87 %, with an IC50 value of 0.12±0.02 mg mL-1 , which was significantly difference from the positive control, Trolox. Chloroform fraction showed the strongest inhibitory effect against Mimosa pudica (MP) seed germination at 1.0 mg mL-1 (100 % inhibition), which was better than that of the chemical herbicide paraquat. In the seed growth experiment, systematic EC50 and the principal component analysis (PCA) were used to assess the allelopathic potential of extracts. The systematic EC50 values of Crotalaria pallida Ait. (CP), Bidens pilosa L. (BP) were significantly greater than MP. MP, Oryza sativa L. (OS) and Lactuca satiua L., (LS) inhibited all parameters. Our results would provide an idea for controlling weeds through allelopathy from C. splendens to reduce dependency on synthetic herbicides.


Subject(s)
Antioxidants , Apocynaceae , Allelopathy , Antioxidants/chemistry , Antioxidants/pharmacology , Chloroform , Methanol , Plant Extracts/chemistry , Plant Extracts/pharmacology
7.
Phytopathology ; 111(11): 2010-2022, 2021 Nov.
Article in English | MEDLINE | ID: mdl-33900117

ABSTRACT

Extensive efforts have been made to discover new biofungicides of high efficiency for control of Fusarium oxysporum f. sp. cubense race 4, a catastrophic soilborne phytopathogen causing banana Fusarium wilt worldwide. We confirmed for the first time that aureoverticillactam (YY3) has potent antifungal activity against F. oxysporum f. sp. cubense race 4, with effective dose for 50% inhibition (EC50) of 20.80 µg/ml against hyphal growth and 12.62 µg/ml against spore germination. To investigate its mechanism of action, we observed the cellular ultrastructures of F. oxysporum f. sp. cubense race 4 with YY3 treatment and found that YY3 led to cell wall thinning, mitochondrial deformities, apoptotic degradation of the subcellular fractions, and entocyte leakage. Consistent with these variations, increased permeability of cell membrane and mitochondrial membrane also occurred after YY3 treatment. On the enzymatic level, the activity of mitochondrial complex III, as well as the ATP synthase, was significantly suppressed by YY3 at a concentration >12.50 µg/ml. Moreover, YY3 elevated the cytosolic Ca2+ level to promote mitochondrial reactive oxygen species (ROS) production. Cell apoptosis also occurred as expected. On the transcriptome level, key genes involved in the phosphatidylinositol signaling pathway were significantly affected, with the expression level of Plc1 increased approximately fourfold. The expression levels of two apoptotic genes, casA1 and casA2, were also significantly increased by YY3. Of note, phospholipase C activation was observed with YY3 treatment in F. oxysporum f. sp. cubense race 4. These findings indicate that YY3 exerts its antifungal activity by activating the phospholipase C calcium-dependent ROS signaling pathway, which makes it a promising biofungicide.


Subject(s)
Fusarium , Musa , Antifungal Agents/pharmacology , Apoptosis , Calcium , Lactams , Lactams, Macrocyclic , Macrolides , Plant Diseases , Streptomyces , Type C Phospholipases
8.
Dig Endosc ; 32(7): 1105-1110, 2020 Nov.
Article in English | MEDLINE | ID: mdl-32702176

ABSTRACT

Endoscopy is widely used as a clinical diagnosis and treatment method for certain hepatobiliary and pancreatic diseases. However, due to the distinctive epidemiological characteristics of severe acute respiratory syndrome coronavirus 2, the virus causing coronavirus disease-2019 (COVID-19), healthcare providers are exposed to the patient's respiratory and gastrointestinal fluids, rendering endoscopy a high risk for transmitting a nosocomial infection. This article introduces preventive measures for endoscopic treatment enacted in our medical center during COVID-19, including the adjustment of indications, the application of endoscope protective equipment, the design and application of endoscopic masks and splash-proof films, and novel recommendations for bedside endoscope pre-sterilization.


Subject(s)
Coronavirus Infections/prevention & control , Cross Infection/prevention & control , Disease Transmission, Infectious/prevention & control , Endoscopes/standards , Endoscopy, Gastrointestinal/standards , Infection Control/standards , Masks , Pandemics/prevention & control , Pneumonia, Viral/prevention & control , Air Microbiology , Betacoronavirus , COVID-19 , China/epidemiology , Coronavirus Infections/epidemiology , Equipment Contamination/prevention & control , Hospital Units/standards , Humans , Pneumonia, Viral/epidemiology , SARS-CoV-2 , Sterilization
10.
J Org Chem ; 84(7): 3960-3967, 2019 04 05.
Article in English | MEDLINE | ID: mdl-30834752

ABSTRACT

A new strategy is presented to preclude aggregation and enhance water solubility of cyanine dyes. Namely, a heteroatom-containing substituent, for distorting molecular plane and increasing interaction with water molecules, is introduced to the methine chain of 2-thiazole orange (1, a monocyanine) via one-step, and 2-thiazole orange derivatives 2a-g are prepared accordingly. The X-ray crystal structures show that the molecular plane of 2a-g is drastically twisted, which reduces intermolecular π-π stacking. The derivatives 2a-g exhibit good to excellent water solubility and can be dissolved in aqueous phosphate-buffered saline (PBS) at concentrations suitable for biomedical applications. No aggregation in aqueous PBS, relatively high molar extinction coefficients, and low solvatochromism of 2a-g are reflected by the UV-vis spectra. Compound 2b shows fast response and high selectivity for biothiols (Cys, Hcy, and GSH) in aqueous PBS and is further employed to detect endogenous biothiols with decent biocompatibility as demonstrated by live cell fluorescence imaging.


Subject(s)
Benzothiazoles/chemistry , Quinolines/chemistry , Amino Acids/analysis , Amino Acids/chemistry , Benzothiazoles/chemical synthesis , Buffers , Crystallography, X-Ray , Fluorescent Dyes/chemistry , Quinolines/chemical synthesis , Solubility , Spectrophotometry, Ultraviolet , Structure-Activity Relationship , Water/chemistry
11.
Entropy (Basel) ; 21(2)2019 Feb 01.
Article in English | MEDLINE | ID: mdl-33266854

ABSTRACT

For continuous numerical data sets, neighborhood rough sets-based attribute reduction is an important step for improving classification performance. However, most of the traditional reduction algorithms can only handle finite sets, and yield low accuracy and high cardinality. In this paper, a novel attribute reduction method using Lebesgue and entropy measures in neighborhood rough sets is proposed, which has the ability of dealing with continuous numerical data whilst maintaining the original classification information. First, Fisher score method is employed to eliminate irrelevant attributes to significantly reduce computation complexity for high-dimensional data sets. Then, Lebesgue measure is introduced into neighborhood rough sets to investigate uncertainty measure. In order to analyze the uncertainty and noisy of neighborhood decision systems well, based on Lebesgue and entropy measures, some neighborhood entropy-based uncertainty measures are presented, and by combining algebra view with information view in neighborhood rough sets, a neighborhood roughness joint entropy is developed in neighborhood decision systems. Moreover, some of their properties are derived and the relationships are established, which help to understand the essence of knowledge and the uncertainty of neighborhood decision systems. Finally, a heuristic attribute reduction algorithm is designed to improve the classification performance of large-scale complex data. The experimental results under an instance and several public data sets show that the proposed method is very effective for selecting the most relevant attributes with high classification accuracy.

12.
Molecules ; 23(10)2018 Oct 06.
Article in English | MEDLINE | ID: mdl-30301226

ABSTRACT

Different teas from everywhere are very useful and have been extensively studied. We studied the antioxidant activity of herbal teas and green teas from Hainan, Mallotus oblongifolius Muell. Arg. (MO), Ilex kudingcha C.J. Tseng (KD), Camellia sinensis var. assamica (J. W. Mast.) Kitam. Hainan Dayezhong (DY), and Camellia sinensis (L.) O. Ktze. (produced from Hainan Baisha (BS)). The total phenol content and total flavonoid content from water extracts, resin extracts and fractions of herbal teas and green teas were compared. Later, eight fractions of herbal teas and green teas were subjected to UPLC-PDA-ESI-(-)-HRMS. We determined 1-diphenyl -2-picryl-hydrazyl radical and hydroxyl free radical scavenging activity by electron paramagnetic resonance spectroscopy. We subjected Saccharomyces cerevisiae to hydrogen peroxide, stress and evaluated antioxidant activity of herbal teas and green teas in cellulo. The experiment identified more than 14 potential antioxidant compounds from herbal teas and green teas. The herbal teas and green teas had a clearance rate higher than ferulic acid at the same concentrations. MO best reduced intracellular oxidation levels and increased catalase, glutathione reductase activities, glutathione reduced and glutathione oxidized content. KD had the highest cell survival rate and reduced cell lipid peroxidation. DY best improved superoxide dismutase activity and BS was the most active in the halo test. Therefore, we concluded that MO had stronger antioxidant activity than other herbal teas and green teas from Hainan, especially, which reduce S. cerevisiae oxidative stress under H2O2 stress.


Subject(s)
Oxidative Stress/drug effects , Phenols/chemistry , Tea/chemistry , Teas, Herbal , Antioxidants , Flavonoids/chemistry , Hydrogen Peroxide/chemistry , Lipid Peroxidation/drug effects , Plant Extracts/chemistry , Plant Extracts/pharmacology , Saccharomyces cerevisiae/drug effects
13.
Molecules ; 23(6)2018 May 24.
Article in English | MEDLINE | ID: mdl-29794975

ABSTRACT

Take-all, caused by Gaeumannomyces tritici, is one of the most important wheat root diseases worldwide, as it results in serious yield losses. In this study, G. tritici was transformed to express the hygromycin B phosphotransferase using a combined protoplast and polyethylene glycol (PEG)-mediated transformation technique. Based on a series of single-factor experimental results, three major factors-temperature, enzyme lysis time, and concentration of the lysing enzyme-were selected as the independent variables, which were optimized using the response surface methodology. A higher protoplast yield of 9.83 × 107 protoplasts/mL was observed, and the protoplast vitality was also high, reaching 96.27% after optimization. Protoplasts were isolated under the optimal conditions, with the highest transformation frequency (46⁻54 transformants/µg DNA). Polymerase chain reaction and Southern blotting detection indicated that the genes of hygromycin phosphotransferase were successfully inserted into the genome of G. tritici. An optimised PEG-mediated protoplast transformation system for G. tritici was established. The techniques and procedures described will lay the foundation for establishing a good mutation library of G. tritici and could be used to transform other fungi.


Subject(s)
Phosphotransferases (Alcohol Group Acceptor)/genetics , Protoplasts/metabolism , Saccharomycetales/growth & development , Transformation, Genetic , Gene Transfer Techniques , Phosphotransferases (Alcohol Group Acceptor)/metabolism , Polyethylene Glycols , Protoplasts/enzymology , Saccharomycetales/genetics , Saccharomycetales/metabolism , Temperature , Triticum/microbiology
14.
Anal Chem ; 88(22): 11253-11260, 2016 11 15.
Article in English | MEDLINE | ID: mdl-27780356

ABSTRACT

A broad-spectrum fluorescent probe, which can be applied to monitoring H2S in various biological systems, has been rationally designed and synthesized. This specific probe was applied to localize the endogenous H2S in living Raw264.7 macrophage cells, HepG2 cells, and H9C2 cells. At the same time, the probe has successfully visualized CBS- and CSE-induced endogenous H2S production and monitored CBS and CSE activity in H9C2 cells. This probe could serve as a powerful molecular imaging tool to further explore the physiological function and the molecular mechanisms of endogenous H2S in living animal systems.


Subject(s)
Fluorescein/chemistry , Fluorescent Dyes/chemistry , Hydrogen Sulfide/blood , Optical Imaging , Animals , Cell Line , Fluorescein/chemical synthesis , Fluorescent Dyes/chemical synthesis , Hep G2 Cells , Humans , Mice , Mice, Inbred Strains , Molecular Structure , Quantum Theory , RAW 264.7 Cells , Rats , Spectrometry, Fluorescence
15.
J Org Chem ; 81(15): 6303-13, 2016 08 05.
Article in English | MEDLINE | ID: mdl-27379526

ABSTRACT

A convenient approach for the direct synthesis of meso-substituted thiazole orange (meso-TO) analogues has been unprecedentedly developed through the AlCl3-catalyzed reaction of parent TO with benzyl alcohol derivatives. Single-crystal X-ray structures show that the prepared new meso-TO analogues are nonplanar, forming a sharp contrast to planar TO. The spectral properties show that nonplanar meso-TO analogues do not aggregate, existing in monomer form (M) in PBS buffer, and have little effect of solvatochromism in different solvents. In comparison with the parents, meso-TO analogues exhibit a large Stokes shift, excellent light fastness, and inertness to singlet oxygen. A cellular association study demonstrates that incorporation of a benzyl group at the meso position methine of parent TO can decrease the cytotoxicity, change staining area in cells, and emit long-wavelength fluorescence for an extended time, which are useful for the development of smarter TOs for imaging in biological science.


Subject(s)
Benzothiazoles/chemistry , Carbocyanines/chemical synthesis , Quinolines/chemistry , Animals , Carbocyanines/chemistry , Crystallography, X-Ray , Fluorescence , Humans , Light , MCF-7 Cells , Magnetic Resonance Spectroscopy , Microscopy, Confocal , Models, Molecular , Molecular Structure , Photochemical Processes , Protein Domains , Rats , Singlet Oxygen/chemistry , Solvents
16.
Avian Pathol ; 44(3): 162-8, 2015.
Article in English | MEDLINE | ID: mdl-25690020

ABSTRACT

Riemerella anatipestifer is a major bacterial pathogen of waterfowl, globally responsible for avian septicaemic disease. As chemotherapy is the predominant method for the prevention and treatment of R. anatipestifer infection in poultry, the widespread use of antibiotics has favoured the emergence of antibiotic-resistant strains. However, little is known about R. anatipestifer susceptibility to macrolide antibiotics and its resistance mechanism. We report for the first time the identification of a macrolide resistance mechanism in R. anatipestifer that is mediated by the ribosomal RNA methyltransferase ermF. We identified the presence of the ermF gene in 64/206 (31%) R. anatipestifer isolates from different regions in China. An ermF deletion strain was constructed to investigate the function of the ermF gene on the resistance to high levels of macrolides. The ermF mutant strain showed significantly decreased resistance to macrolide and lincosamide, exhibiting 1024-, 1024-, 4- and >2048-fold reduction in the minimum inhibitory concentrations for erythromycin, azithromycin, tylosin and lincomycin, respectively. Furthermore, functional analysis of ermF expression in E. coli XL1-blue showed that the R. anatipestifer ermF gene was functional in E. coli XL1-blue and conferred resistance to high levels of erythromycin (100 µg/ml), supporting the hypothesis that the ermF gene is associated with high-level macrolide resistance. Our work suggests that ribosomal RNA modification mediated by the ermF methyltransferase is the predominant mechanism of resistance to erythromycin in R. anatipestifer isolates.


Subject(s)
Bacterial Proteins/genetics , Drug Resistance, Bacterial/genetics , Drug Resistance, Microbial/genetics , Methyltransferases/genetics , Riemerella/enzymology , Anti-Bacterial Agents/pharmacology , Azithromycin , China , Electrophoresis, Polyacrylamide Gel , Erythromycin , Escherichia coli , Lincomycin , Macrolides/pharmacology , Microbial Sensitivity Tests , Polymerase Chain Reaction , Riemerella/drug effects , Riemerella/genetics , Tylosin
17.
Brain Behav ; 14(1): e3376, 2024 01.
Article in English | MEDLINE | ID: mdl-38376022

ABSTRACT

OBJECTIVES: Previous studies have suggested a potential link between poly(rC)-binding protein 1 (PCBP1) and neurodegenerative diseases, including Parkinson's disease (PD). However, the precise role of PCBP1 in the pathogenesis of PD remains unclear. Therefore, the main objective of this study was to investigate the neuroprotective effects of PCBP1 in a PD model. METHODS: To evaluate the neuroprotective potential of PCBP1, we conducted cell count assays and observed the expression of heat shock protein 70 (HSP70) in SH-SY5Y cells exposed to 6-OHDA-induced neurotoxicity. Additionally, we utilized recombinant adeno-associated virus (rAAV2) vectors encoding PCBP1 or EGFP, which were injected into the rat striatum. After 2 weeks of vector or saline injection, 6-OHDA was administered to the rat striatum. Behavioral assessments using the open field test (OFT) were performed weekly for 7 weeks. At the seventh week after 6-OHDA injection, immunohistochemistry and protein expression analyses were conducted in the three groups. RESULTS: The results indicated that PCBP1 treatment significantly reduced the proliferation of 6-OHDA-induced SH-SY5Y cells. Additionally, in surviving cells, overexpression of PCBP1 enhanced the expression of HSP70. Similarly, rAAV2 vectors effectively delivered PCBP1 into the brain, resulting in sustained expression of rAAV2-PCBP1-EGFP. In the OFT, PCBP1 exhibited significant improvements in behavioral abnormalities and reduced anxiety in the PD model rats (p < .01). Moreover, PCBP1 effectively prevented the decrease of tyrosine hydroxylase and HSP70 expression in the lesioned side induced by 6-OHDA (p < .01). Consistent with expectations, PCBP1 efficiently protected against cell death caused by 6-OHDA (p < .01). CONCLUSIONS: In conclusion, our findings provide compelling evidence for the beneficial effects of PCBP1 in the PD model, suggesting that PCBP1 could be a potential therapeutic target for PD.


Subject(s)
Neuroblastoma , Neuroprotective Agents , Parkinson Disease , Animals , Humans , Rats , Disease Models, Animal , DNA-Binding Proteins , Genetic Therapy , Neuroprotective Agents/pharmacology , Oxidopamine , Parkinson Disease/therapy , Parkinson Disease/drug therapy , RNA-Binding Proteins/genetics
18.
Insects ; 15(2)2024 Feb 01.
Article in English | MEDLINE | ID: mdl-38392515

ABSTRACT

The red imported fire ant (Solenopsis invicta Buren) is one of the 100 worst invasive alien species in the world. At present, the control of red imported fire ants is still mainly based on chemical control, and the most commonly used is indoxacarb bait. In this study, the contact and feeding toxicity of 16 kinds of nanomaterials to workers, larvae, and reproductive ants were evaluated after 24 h, 48 h, and 72 h. The results showed that the mortality of diatomite, Silica (raspberry-shaped), and multi-walled carbon nanotubes among workers reached 98.67%, 97.33%, and 68%, respectively, after contact treatment of 72 h. The mortality of both larval and reproductive ants was less than 20% after 72 h of treatment. All mortality rates in the fed treatment group were below 20% after 72 h. Subsequently, we evaluated the digging, corpse-removal, and foraging behaviors of workers after feeding with diatomite, Silica (raspberry-shaped), and multi-walled carbon nanotubes for 24 h, which yielded inhibitory effects on the behavior of red imported fire ants. The most effective was diatomite, which dramatically decreased the number of workers that dug, extended the time needed for worker ant corpse removal and foraging activities, decreased the number of workers that foraged, and decreased the weight of the food carried by the workers. In addition, we also evaluated the contact and feeding toxicity of these three nanomaterials in combination with indoxacarb on red imported fire ants. According to contact toxicity, after 12 h of contact treatment, the death rate among the red imported fire ants exposed to the three materials combined with indoxacarb reached more than 97%. After 72 h of exposure treatment, the mortality rate of larvae was more than 73% when the nanomaterial content was above 1% and 83% when the diatomite content was 0.5%, which was significantly higher than the 50% recorded in the indoxacarb control group. After 72 h of feeding treatment, the mortality of diatomite, Silica (raspberry-shaped), and multi-walled carbon nanotubes combined with indoxacarb reached 92%, 87%, and 98%, respectively. The death rates of the three kinds of composite ants reached 97%, 67%, and 87%, respectively. The three kinds of composite food had significant inhibitory effects on the behavior of workers, and the trend was largely consistent with the effect of nanomaterials alone. This study provides technical support for the application of nanomaterials in red imported fire ant control.

19.
J Photochem Photobiol B ; 254: 112893, 2024 May.
Article in English | MEDLINE | ID: mdl-38531303

ABSTRACT

An aromatic ring-containing compound with a wide range of biological activities, 9-methylacridine (AD-9-Me) is a precursor for the synthesis of various drugs. However, its photoactivation properties and mechanism of damage as a photo activator against Aedes aegypti are unknown. The toxic effects of AD-9-Me on Aedes aegypti mosquitoes were determined under light and non-light conditions. The results showed that the toxicity of AD-9-Me to mosquito larvae was significantly higher than that of the dark treatment after 24 h of light exposure; AD-9-Me was mainly distributed in the midgut of larvae, after 24 h of treatment, it can cause an increase in calcium ion concentration, reactive oxygen species (ROS) eruption and ROS accumulation by blocking the ROS elimination pathway in midgut cells. This in turn caused an increase in protein carbonyl and malondialdehyde (MDA) content, a decrease in mitochondrial membrane potential (MMP), a disruption of the barrier function of midgut tissues, a significant decrease in midgut weight and chitin content, which induced the up-regulation of AeDronc, AeCaspase8 and AeCaspase7 genes, leading to apoptotic cell death. In this study, we confirmed that AD-9-Me has photoactivation activity and mainly acts on the midgut of mosquito larvae, which can generate a large amount of ROS in the cells of the midgut and induce apoptosis to occur, resulting in the disruption of the function of the tissues of mosquito larvae, accelerating the death and delaying the development of the mosquito larvae.


Subject(s)
Aedes , Animals , Reactive Oxygen Species/metabolism , Larva , Mitochondria/metabolism , Apoptosis
20.
J Fungi (Basel) ; 10(3)2024 Feb 26.
Article in English | MEDLINE | ID: mdl-38535184

ABSTRACT

Sclerotinia sclerotiorum (Lib.) de Bary, a polyphagous necrotrophic fungal pathogen, has brought about significant losses in agriculture and floriculture. Until now, the most common method for controlling S. sclerotiorum has been the application of fungicides. Xenocoumacin 1 (Xcn1) is a potential biopesticide having versatile antimicrobial activities, generated by Xenorhabdus nematophila. This study was intended to isolate Xcn1 from X. nematophila YL001 and clarify its efficacies for S. sclerotiorum control. Xcn1 demonstrated a wider antifungal spectrum against 10 plant-pathogenic fungi. It also exhibited a strong inhibitory effect on the mycelial growth of S. sclerotiorum with an EC50 value of 3.00 µg/mL. Pot experiments indicated that Xcn1 effectively inhibited disease extension on oilseed rape and broad bean plants caused by S. sclerotiorum. Morphological and ultrastructural observations revealed that the hyphae of S. sclerotiorum became twisted, shriveled, and deformed at the growing points after treatment with Xcn1 at 3.00 µg/mL and that the subcellular fractions also became abnormal concurrently, especially the mitochondrial structure. Moreover, Xcn1 also increased cell membrane permeability and decreased the content of exopolysaccharide as well as suppressing the activities of polygalacturonase and cellulase of S. sclerotiorum, but exerted no effects on oxalic acid production. This study demonstrated that Xcn1 has great potential to be developed as a new biopesticide for the control of S. sclerotiorum.

SELECTION OF CITATIONS
SEARCH DETAIL