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1.
Toxicol Appl Pharmacol ; 283(3): 223-33, 2015 Mar 15.
Article in English | MEDLINE | ID: mdl-25620057

ABSTRACT

The tungsten alloy of 91% tungsten, 6% nickel and 3% cobalt (WNC 91-6-3) induces rhabdomyosarcoma when implanted into a rat thigh muscle. To investigate whether this effect is species-specific human HSkMc primary muscle cells were exposed to WNC 91-6-3 particles and responses were compared with those from a rat skeletal muscle cell line (L6-C11). Toxicity was assessed by the adenylate kinase assay and microscopy, DNA damage by the Comet assay. Caspase 3 enzyme activity was measured and oligonucleotide microarrays were used for transcriptional profiling. WNC 91-6-3 particles caused toxicity in cells adjacent to the particles and also increased DNA strand breaks. Inhibition of caspase 3 by WNC 91-6-3 occurred in rat but not in human cells. In both rat and human cells, the transcriptional response to WNC 91-6-3 showed repression of transcripts encoding muscle-specific proteins with induction of glycolysis, hypoxia, stress responses and transcripts associated with DNA damage and cell death. In human cells, genes encoding metallothioneins were also induced, together with genes related to angiogenesis, dysregulation of apoptosis and proliferation consistent with pre-neoplastic changes. An alloy containing iron, WNF 97-2-1, which is non-carcinogenic in vivo in rats, did not show these transcriptional changes in vitro in either species while the corresponding cobalt-containing alloy, WNC 97-2-1 elicited similar responses to WNC 91-6-3. Tungsten alloys containing both nickel and cobalt therefore have the potential to be carcinogenic in man and in vitro assays coupled with transcriptomics can be used to identify alloys, which may lead to tumour formation, by dysregulation of biochemical processes.


Subject(s)
Alloys/toxicity , Cell Transformation, Neoplastic/chemically induced , Muscle Fibers, Skeletal/drug effects , Muscle Proteins/metabolism , Tungsten Compounds/toxicity , Adult , Animals , Caspase 3/metabolism , Caspase Inhibitors/toxicity , Cell Line , Cell Transformation, Neoplastic/genetics , Cell Transformation, Neoplastic/metabolism , Cell Transformation, Neoplastic/pathology , Comet Assay , DNA Breaks , Gene Expression Profiling/methods , Gene Expression Regulation, Neoplastic , Humans , Male , Muscle Fibers, Skeletal/metabolism , Muscle Fibers, Skeletal/pathology , Muscle Proteins/genetics , Oligonucleotide Array Sequence Analysis , Rats , Risk Assessment , Species Specificity , Transcription, Genetic
2.
J Proteome Res ; 12(6): 2895-904, 2013 Jun 07.
Article in English | MEDLINE | ID: mdl-23611792

ABSTRACT

Interactions between epigenome and the environment in biology and in disease are of fundamental importance. The incidence of hepatocellular adenomas in flatfish exceeds 20% in some environments forming a unique opportunity to study environmental tumorigenesis of general relevance to cancer in humans. We report the novel finding of marked DNA methylation and metabolite concentration changes in histopathologically normal tissue distal to tumors in fish liver. A multi-"omics" discovery approach led to targeted and quantitative gene transcription analyses and metabolite analyses of hepatocellular adenomas and histologically normal liver tissue in the same fish. We discovered a remarkable and consistent global DNA hypomethylation, modification of DNA methylation and gene transcription, and disruption of one-carbon metabolism in distal tissue compared to livers of non-tumor-bearing fish. The mechanism of this disruption is linked not to depletion of S-adenosylmethionine, as is often a feature of mammalian tumors, but to a decrease in choline and elevated S-adenosylhomocysteine, a potent inhibitor of DNA methyltransferase. This novel feature of normal-appearing tissue of tumor-bearing fish helps to understand the unprecedentedly high incidence of tumors in fish sampled from the field and adds weight to the controversial epigenetic progenitor model of tumorigenesis. With further studies, the modifications may offer opportunities as biomarkers of exposure to environmental factors influencing disease.


Subject(s)
Adenoma, Liver Cell/veterinary , Carcinogenesis/genetics , DNA Methylation , Fish Diseases/metabolism , Liver Neoplasms/veterinary , Liver/metabolism , S-Adenosylhomocysteine/metabolism , Adenoma, Liver Cell/genetics , Adenoma, Liver Cell/metabolism , Adenoma, Liver Cell/pathology , Animals , Carcinogenesis/metabolism , DNA (Cytosine-5-)-Methyltransferases/genetics , DNA (Cytosine-5-)-Methyltransferases/metabolism , Epigenomics , Fish Diseases/genetics , Fish Diseases/pathology , Flatfishes , Gene Expression Regulation , Gene-Environment Interaction , Humans , Liver/pathology , Liver Neoplasms/genetics , Liver Neoplasms/metabolism , Liver Neoplasms/pathology , Tumor Microenvironment
3.
PLoS Comput Biol ; 7(8): e1002126, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21901081

ABSTRACT

The acquisition and analysis of datasets including multi-level omics and physiology from non-model species, sampled from field populations, is a formidable challenge, which so far has prevented the application of systems biology approaches. If successful, these could contribute enormously to improving our understanding of how populations of living organisms adapt to environmental stressors relating to, for example, pollution and climate. Here we describe the first application of a network inference approach integrating transcriptional, metabolic and phenotypic information representative of wild populations of the European flounder fish, sampled at seven estuarine locations in northern Europe with different degrees and profiles of chemical contaminants. We identified network modules, whose activity was predictive of environmental exposure and represented a link between molecular and morphometric indices. These sub-networks represented both known and candidate novel adverse outcome pathways representative of several aspects of human liver pathophysiology such as liver hyperplasia, fibrosis, and hepatocellular carcinoma. At the molecular level these pathways were linked to TNF alpha, TGF beta, PDGF, AGT and VEGF signalling. More generally, this pioneering study has important implications as it can be applied to model molecular mechanisms of compensatory adaptation to a wide range of scenarios in wild populations.


Subject(s)
Ecosystem , Metabolomics/methods , Models, Biological , Systems Biology/methods , Analysis of Variance , Animals , Cluster Analysis , Environmental Exposure , Flounder , Gene Expression Regulation , Gene Regulatory Networks , Geologic Sediments , Humans , Liver/drug effects , Liver/metabolism , Metabolic Networks and Pathways , Transcriptome
4.
Nucleic Acids Res ; 36(10): 3420-35, 2008 Jun.
Article in English | MEDLINE | ID: mdl-18445632

ABSTRACT

Functional genomics technologies have been widely adopted in the biological research of both model and non-model species. An efficient functional annotation of DNA or protein sequences is a major requirement for the successful application of these approaches as functional information on gene products is often the key to the interpretation of experimental results. Therefore, there is an increasing need for bioinformatics resources which are able to cope with large amount of sequence data, produce valuable annotation results and are easily accessible to laboratories where functional genomics projects are being undertaken. We present the Blast2GO suite as an integrated and biologist-oriented solution for the high-throughput and automatic functional annotation of DNA or protein sequences based on the Gene Ontology vocabulary. The most outstanding Blast2GO features are: (i) the combination of various annotation strategies and tools controlling type and intensity of annotation, (ii) the numerous graphical features such as the interactive GO-graph visualization for gene-set function profiling or descriptive charts, (iii) the general sequence management features and (iv) high-throughput capabilities. We used the Blast2GO framework to carry out a detailed analysis of annotation behaviour through homology transfer and its impact in functional genomics research. Our aim is to offer biologists useful information to take into account when addressing the task of functionally characterizing their sequence data.


Subject(s)
Genomics , Sequence Analysis, DNA , Sequence Analysis, Protein , Software , Animals , Computational Biology , Computer Graphics , Databases, Genetic , Expressed Sequence Tags/chemistry , Genes/physiology , Vocabulary, Controlled
5.
Toxicology ; 256(3): 143-51, 2009 Feb 27.
Article in English | MEDLINE | ID: mdl-19027819

ABSTRACT

We evaluated the effects of two putative non-genotoxic hepatic carcinogens, hexabromocyclododecane (HBCD) and 17-beta oestradiol (E(2)) on global and CpG promoter DNA methylation in both primary human hepatocytes and hepatocellular carcinoma (HepG2) cells. The mRNA gene expression levels of genes involved particularly in cell cycle were also evaluated and potential correlation with DNA methylation status examined. HBCD at 0.03 and 0.3 ng/mL did not produce statistically significant differences in global genomic methylation. However, E(2) (0.1 ng/mL) significantly lowered global DNA methylation levels in HepG2 cells by approximately 65% (P<0.01). In primary hepatocytes, the promoter regions of N-cym and ERalpha were methylated in both control and treated groups, signifying lack of promoter demethylation by both HBCD and E(2). Furthermore, CpG promoter methylation of RB1 was observed in HepG2 cells but this was unaffected by treatments. The remaining genes (p16, C-myc, H-ras, THRalpha, histone H3, TBK1 and TNFRalpha) were unmethylated in their CpG promoter regions in both test systems. Quantitative RT-PCR showed that HBCD at 0.03 ng/mL up-regulated the expression of N-cym whereas E(2) up-regulated the expression of ERalpha and THRalpha genes in primary hepatocytes. In HepG2 cells, the mRNA gene expression levels of p16, RB1 and N-cym were significantly down regulated by HBCD (0.03 ng/mL) and E(2) (0.1 ng/mL) while HBCD at 0.3 ng/mL, significantly down regulated the expression levels of N-cym, ERalpha and ERbeta genes. Thus, while both HBCD and E(2) may alter the expression of certain genes involved in proliferation, the mechanisms appear unrelated to DNA methylation.


Subject(s)
Carcinogens, Environmental/toxicity , DNA Methylation/drug effects , Estradiol/toxicity , Gene Expression/drug effects , Hepatocytes/drug effects , Hydrocarbons, Brominated/toxicity , Apoptosis/drug effects , Apoptosis/genetics , Cell Cycle/drug effects , Cell Cycle/genetics , Cell Line, Tumor , DNA/metabolism , DNA Primers , Gene Expression Profiling , Hepatocytes/metabolism , Humans , Promoter Regions, Genetic , RNA/metabolism , Reverse Transcriptase Polymerase Chain Reaction , Reverse Transcription
6.
Environ Toxicol Chem ; 28(12): 2622-31, 2009 Dec.
Article in English | MEDLINE | ID: mdl-19642832

ABSTRACT

Transformation products of pharmaceuticals formed by human metabolism within sewage treatment plant or receiving waters are predicted, in most cases, to be less toxic than the parent compound to common aquatic species. However, there is little available data to demonstrate whether this is generally the case. In the present study, a framework was developed to guide testing of transformation products using phototransformation of the beta-blocker propranolol to test the hypothesis for this particular transformation route. Phototransformation is an important depletion mechanism of some pharmaceuticals in surface waters with fast reaction rate constants at environmentally relevant conditions. Samples of propranolol in deionized water (DIW) and river water (RW) were exposed to a solar simulator (lambda: 295-800 nm) and comparative toxicity of propranolol and its degraded mixtures measured using algal (Pseudokirchneriella subcapitata) and rotifer (Brachionus calyciflorus) screening tests. Results suggested a reduction of toxicity in photodegraded mixtures compared to the parent active pharmaceutical ingredient in all samples tested. Chemical analysis of effect test solutions supported the hypothesis that propranolol was transformed into compounds that appear to be less toxic to the organisms tested under the study conditions. Although the reactions were much faster in RW than in DIW, profiles of transformation products were similar in both matrices at two starting concentrations (1 and 10 mg/L). Results for propranolol implied that the reduction of toxicity using algal and rotifer screening tests was probably due to the production of more hydrophilic and more polar transformation products. Such results will provide useful insights into the environmental risk assessment of pharmaceuticals by taking into account their transformation products.


Subject(s)
Eukaryota/drug effects , Propranolol/toxicity , Rotifera/drug effects , Water Pollutants, Chemical/toxicity , Animals , Female , Photolysis , Propranolol/chemistry , Rivers
7.
Environ Int ; 34(3): 310-7, 2008 Apr.
Article in English | MEDLINE | ID: mdl-17482264

ABSTRACT

Alteration of DNA methylation is a major epigenetic mechanism associated with the effects of nongenotoxic carcinogens. We evaluated the effects of two environmental pollutants, hexabromocyclododecane (HBCD), 17-beta oestradiol (E(2)) as well as 5-aza 2' deoxycytidine (5AdC) on global DNA methylation levels (5-methyl 2' deoxycytidine) in the liver and gonads of the three-spine stickleback (Gasterosteus aculeatus). HBCD at 30 and 300 ng/L of water did not produce statistically significant differences in global genomic methylation in liver of female stickleback. On the other hand, the methylation inhibitor, 5-aza-2'-deoxycytidine, significantly lowered hepatic global methylation levels in these fish by 14% (P<0.05). The naturally occurring oestrogen, 17-beta oestradiol (E(2)) at 100 ng/L also decreased global DNA methylation levels in female liver but this effect was not statistically significant. In contrast, both E(2) and 5AdC caused statistically significant (P<0.001 and P<0.01 respectively) global genomic hypermethylation in the gonads of male sticklebacks although the increase seen in the female gonads was not statistically significant. The male gonad effect though unexplained may potentially be an indirect response to hypomethylation in other tissues (such as the liver) and may have important implications regarding oestrogenic effects in fish. The contrasting effects of HBCD and E(2) on global DNA methylation in stickleback should contribute to the integrated risk assessment of these environmental chemicals.


Subject(s)
Carcinogens/toxicity , DNA/metabolism , Estradiol/toxicity , Gonads/chemistry , Hydrocarbons, Brominated/toxicity , Liver/chemistry , Smegmamorpha , Animals , Azacitidine/analogs & derivatives , Azacitidine/toxicity , DNA/chemistry , Decitabine , Deoxycytidine/analogs & derivatives , Deoxycytidine/analysis , Female , Male , Methylation
8.
Environ Int ; 114: 95-106, 2018 05.
Article in English | MEDLINE | ID: mdl-29499452

ABSTRACT

Chemicals in the environment occur in mixtures rather than as individual entities. Environmental quality monitoring thus faces the challenge to comprehensively assess a multitude of contaminants and potential adverse effects. Effect-based methods have been suggested as complements to chemical analytical characterisation of complex pollution patterns. The regularly observed discrepancy between chemical and biological assessments of adverse effects due to contaminants in the field may be either due to unidentified contaminants or result from interactions of compounds in mixtures. Here, we present an interlaboratory study where individual compounds and their mixtures were investigated by extensive concentration-effect analysis using 19 different bioassays. The assay panel consisted of 5 whole organism assays measuring apical effects and 14 cell- and organism-based bioassays with more specific effect observations. Twelve organic water pollutants of diverse structure and unique known modes of action were studied individually and as mixtures mirroring exposure scenarios in freshwaters. We compared the observed mixture effects against component-based mixture effect predictions derived from additivity expectations (assumption of non-interaction). Most of the assays detected the mixture response of the active components as predicted even against a background of other inactive contaminants. When none of the mixture components showed any activity by themselves then the mixture also was without effects. The mixture effects observed using apical endpoints fell in the middle of a prediction window defined by the additivity predictions for concentration addition and independent action, reflecting well the diversity of the anticipated modes of action. In one case, an unexpectedly reduced solubility of one of the mixture components led to mixture responses that fell short of the predictions of both additivity mixture models. The majority of the specific cell- and organism-based endpoints produced mixture responses in agreement with the additivity expectation of concentration addition. Exceptionally, expected (additive) mixture response did not occur due to masking effects such as general toxicity from other compounds. Generally, deviations from an additivity expectation could be explained due to experimental factors, specific limitations of the effect endpoint or masking side effects such as cytotoxicity in in vitro assays. The majority of bioassays were able to quantitatively detect the predicted non-interactive, additive combined effect of the specifically bioactive compounds against a background of complex mixture of other chemicals in the sample. This supports the use of a combination of chemical and bioanalytical monitoring tools for the identification of chemicals that drive a specific mixture effect. Furthermore, we demonstrated that a panel of bioassays can provide a diverse profile of effect responses to a complex contaminated sample. This could be extended towards representing mixture adverse outcome pathways. Our findings support the ongoing development of bioanalytical tools for (i) compiling comprehensive effect-based batteries for water quality assessment, (ii) designing tailored surveillance methods to safeguard specific water uses, and (iii) devising strategies for effect-based diagnosis of complex contamination.


Subject(s)
Biological Assay , Environmental Exposure/analysis , Models, Biological , Water Pollutants, Chemical , Animals , Cells, Cultured , Water Pollutants, Chemical/analysis , Water Pollutants, Chemical/toxicity
9.
Toxicol Lett ; 168(3): 236-48, 2007 Feb 05.
Article in English | MEDLINE | ID: mdl-17156945

ABSTRACT

Male European flounder (Platichthys flesus) were intraperitoneally injected with 10mg/kg 17-beta estradiol and tissues taken from individuals over a timecourse of 16 days. The GENIPOL P. flesus cDNA microarray was employed to detect hepatic gene expression differences between fish treated with estradiol and saline controls. Known biomarkers of estrogen exposure, choriogenin L and vitellogenins, showed sustained induction over the time-course. Among 175 identified clones showing sustained statistically significant induction or repression, those associated with the Gene Ontology terms mitochondria, amino acid synthesis, ubiquitination and apoptosis were included amongst those induced while those associated with immune function, electron transport, cell signalling and protein phosphorylation were repressed. Thus, we show the gene expression response of an environmentally relevant fish species to a high dose of an estrogenic endocrine disruptor and also report the sequencing of a further 2121 flounder ESTs.


Subject(s)
Estradiol/toxicity , Flounder/genetics , Gene Expression Profiling , Liver/drug effects , Animals , Liver/metabolism , Male , Oligonucleotide Array Sequence Analysis , Sequence Analysis, DNA , Vitellogenins/genetics
10.
Environ Toxicol Chem ; 26(4): 695-707, 2007 Apr.
Article in English | MEDLINE | ID: mdl-17447554

ABSTRACT

Laboratory studies were conducted to investigate potential adverse effects on development, growth, reproduction and biomarker responses (vitellogenin [VTG] and gonad histology) in fathead minnows (Pimephales promelas) exposed to tamoxifen citrate. Based on the results of a partial life cycle study (nominal [mean measured] concentrations ranged from 0.18 [0.11] to 18 [15.74] microg/L), a 284-d fish full life-cycle (FFLC) flow-through study was conducted using newly fertilized embryos (<24 h postfertilization) exposed to nominal (mean measured) concentrations of 14C-tamoxifen citrate that ranged from 0.01 (0.007) to 5.12 (4.08) microg/L. Triethylene glycol (2.0 microl/L) was used as a solvent carrier, with 17beta-estradiol (E2) as a positive control (nominal 0.1 microg/L). Among the biomarkers measured, significant effects on VTG and gonad histology were observed, although these results required care in their interpretation. Among important population-relevant endpoints, no effects on reproduction were observed at nominal concentrations < or = 5.12 microg/L. Effects on growth (length and weight) were observed in some treatments; however, some of these showed irregular concentration-response relationships, which made interpretation uncertain, or were deemed transient in nature (e.g., reduction in growth of F1 28-d posthatch larval fish at nominal concentrations of 0.08, 0.64, and 5.12 microg/L) and judged not to be biologically significant. Interpretation of results from fish chronic studies is challenging and frequently calls for scientific judgement about statistical and biological significance and what constitutes an adverse effect. Using the principles used in mammalian toxicology studies, data from partial and FFLC studies were evaluated from both statistical and biological perspectives in order to determine no-observed-adverse effect concentrations (expressed as (adverse)NOEC) for use in environmental risk assessment. Careful consideration of both biological and statistical outcomes from these studies suggested overall (adverse)NOEC concentration and lowest-observed-effect concentration ((adverse)LOEC) values for tamoxifen citrate of 5.12 microg/L and 5.6 microg/L, respectively.


Subject(s)
Cyprinidae/physiology , Growth and Development/drug effects , Reproduction/drug effects , Tamoxifen/toxicity , Toxicity Tests/methods , Animals , Biomarkers/analysis , Body Weights and Measures , Carbon Radioisotopes/metabolism , Microbial Sensitivity Tests , No-Observed-Adverse-Effect Level , Reproduction/physiology
11.
Aquat Toxicol ; 184: 26-36, 2017 Mar.
Article in English | MEDLINE | ID: mdl-28081447

ABSTRACT

Some fish populations inhabiting contaminated environments show evidence of increased chemical tolerance, however the mechanisms contributing to this tolerance, and whether this is heritable, are poorly understood. We investigated the responses of two populations of wild three-spined stickleback (Gasterosteus aculeatus) with different histories of contaminant exposure to an oestrogen and copper, two widespread aquatic pollutants. Male stickleback originating from two sites, the River Aire, with a history of complex pollution discharges, and Siblyback Lake, with a history of metal contamination, were depurated and then exposed to copper (46µg/L) and the synthetic oestrogen ethinyloestradiol (22ng/L). The hepatic transcriptomic response was compared between the two populations and to a reference population with no known history of exposure (Houghton Springs, Dorset). Gene responses included those typical for both copper and oestrogen, with no discernable difference in response to oestrogen between populations. There was, however, some difference in the magnitude of response to copper between populations. Siblyback fish showed an elevated baseline transcription of genes encoding metallothioneins and a lower level of metallothionein induction following copper exposure, compared to those from the River Aire. Similarly, a further experiment with an F1 generation of Siblyback fish bred in the laboratory found evidence for elevated transcription of genes encoding metallothioneins in unexposed fish, together with an altered transcriptional response to 125µg/L copper, compared with F1 fish originating from the clean reference population exposed to the same copper concentration. These data suggest that the stickleback from Siblyback Lake have a differential response to copper, which is inherited by the F1 generation in laboratory conditions, and for which the underlying mechanism may include an elevation of baseline transcription of genes encoding metallothioneins. The genetic and/or epigenetic mechanisms contributing to this inherited alteration of metallothionein transcription have yet to be established.


Subject(s)
Copper/toxicity , Gene Expression Regulation/drug effects , Liver/drug effects , Smegmamorpha/physiology , Animals , Ethinyl Estradiol/toxicity , Lakes , Male , Metallothionein/genetics , Rivers , Water Pollutants, Chemical/toxicity
12.
Toxicol Sci ; 92(2): 387-93, 2006 Aug.
Article in English | MEDLINE | ID: mdl-16714392

ABSTRACT

Cytochrome P450 1A (CYP 1A) is a member of a multigene family of xenobiotic metabolizing enzymes. CYP 1A is highly inducible by numerous environmental contaminants including polycyclic aromatic hydrocarbons (PAHs) and is widely used in biomonitoring studies. Therefore, understanding the regulation of this gene is important for accurate interpretation of biomarker data. We describe here the functional role of a metal response element (MRE) in the European flounder CYP 1A promoter region. To help elucidate the potential role of this MRE, reporter gene constructs, with or without site-directed mutagenesis, were used in conjunction with a dual-luciferase assay. The electrophoretic mobility shift assay (EMSA) was also used to investigate potential protein binding at this MRE site. Treatment with the prototypical PAH 3-methylcholanthrene (3MC) (1.0 microM) produced a dose-dependent response at the CYP 1A promoter, whereas treatment with cadmium (0-1.0 microM) produced little transcriptional activity at either the wild-type or mutated promoter. Cotreatment with cadmium (1.0 microM) and 3MC (1.0 microM) reduced induction at this promoter to 1.83-fold compared to 3MC treatment alone (4.0-fold induction). Mutation of the MRE site resulted in abolishment of this cadmium-related loss of 3MC-dependent activity. Furthermore, a retarded band was observed in the EMSA when the MRE was used as a probe and incubated with liver nuclear protein from flounder treated with cadmium. The results not only add to knowledge of the diversity in vertebrate CYP 1A regulation but also raise the complexity of interpretation of CYP 1A induction in monitoring studies that involve mixtures of PAHs and metals.


Subject(s)
Aryl Hydrocarbon Hydroxylases/genetics , Cadmium/toxicity , Methylcholanthrene/toxicity , Response Elements , Animals , Aryl Hydrocarbon Hydroxylases/biosynthesis , Biomarkers , Cell Line, Tumor , Cyprinidae , Environmental Monitoring/methods , Flounder , Gene Expression Regulation, Enzymologic/drug effects , Genes, Reporter , Liver/enzymology , Mutagenesis, Site-Directed , Promoter Regions, Genetic , Transfection , Water Pollutants, Chemical/toxicity
13.
Ecol Appl ; 16(2): 656-65, 2006 Apr.
Article in English | MEDLINE | ID: mdl-16711052

ABSTRACT

Forecasting the effects of stressors on the dynamics of natural populations requires assessment of the joint effects of a stressor and population density on the population response. The effects can be depicted as a contour map in which the population response, here assessed by population growth rate, varies with stress and density in the same way that the height of land above sea level varies with latitude and longitude. We present the first complete map of this type using as our model Folsomia candida exposed to five different concentrations of the widespread anthelmintic veterinary medicine ivermectin in replicated microcosm experiments lasting 49 days. The concentrations of ivermectin in yeast were 0.0, 6.8, 28.8, 66.4, and 210.0 mg/L wet weight. Increasing density and chemical concentration both significantly reduced the population growth rate of Folsomia candida, in part through effects on food consumption and fecundity. The interaction between density and ivermectin concentration was "less-than-additive," implying that at high density populations were able to compensate for the effects of the chemical. This result demonstrates that regulatory protocols carried out at low density (as in most past experiments) may seriously overestimate effects in the field, where densities are locally high and populations are resource limited (e.g., in feces of livestock treated with ivermectin).


Subject(s)
Arthropods , Insecticides/toxicity , Ivermectin/toxicity , Animals , Arthropods/physiology , Eating/drug effects , Fertility/drug effects , Population Density , Population Growth
14.
Nanotoxicology ; 10(1): 32-41, 2016.
Article in English | MEDLINE | ID: mdl-25740379

ABSTRACT

Ceria nanoparticles (NPs) are widely used as fuel catalysts and consequently are likely to enter the environment. Their potential impacts on. biota at environmentally relevant concentrations, including uptake and toxicity, remain to be elucidated and quantitative data on which to assess risk are sparse. Therefore, a definitive assessment of the molecular and phenotypic effects of ceria NPs was undertaken, using well-characterised mono-dispersed NPs as their toxicity is likely to be higher, enabling a conservative hazard assessment. Unbiased transcriptomics and metabolomics approaches were used to investigate the potential toxicity of tightly constrained 4-5 nm ceria NPs to the unicellular green alga, Chlamydomonas reinhardtii, a sentinel freshwater species. A wide range of exposure concentrations were investigated from predicted environmental levels, to support hazard assessment, to supra-environmental levels to provide insight into molecular toxicity pathways. Ceria NPs were internalised into intracellular vesicles within C. reinhardtii, yet caused no significant effect on algal growth at any exposure concentration. Molecular perturbations were only detected at supra-environmental ceria NP-concentrations, primarily down-regulation of photosynthesis and carbon fixation with associated effects on energy metabolism. For acute exposures to small mono-dispersed particles, it can be concluded there should be little concern regarding their dispersal into the environment for this trophic level.


Subject(s)
Cerium/toxicity , Chlamydomonas reinhardtii/drug effects , Nanoparticles/toxicity , Chlamydomonas reinhardtii/metabolism , Environmental Exposure , Fresh Water , Photosynthesis/drug effects
15.
Environ Toxicol Chem ; 24(6): 1528-31, 2005 Jun.
Article in English | MEDLINE | ID: mdl-16117133

ABSTRACT

Toxicity test protocols for establishing the effect of zinc on the freshwater copepod Bryocamptus zschokkei are reported. In the absence of food, larval life-history stages were more sensitive than adult females to acute zinc exposure with a 96-h median lethal concentration of 0.62 mg Zn/L (0.52-0.73 mg Zn/L, 95% confidence intervals) for copepodids. The acute toxicity of zinc to adult females was also significantly reduced in the presence of food (a leaf disc). The main toxic effect of zinc in a life-cycle test was a reduction in the number of offspring per brood at 0.48 mg Zn/L. As this endpoint corresponded with zinc concentrations causing reduced juvenile survival, prolonged embryonic development times, and mortality during hatching, it appears that zinc had a direct toxic effect on the current brood rather than an indirect effect on egg production via maternal reallocation of resources. The lowest-observed-effect concentration for reproduction of measured zinc concentrations of 0.48 mg Zn/L corresponded with environmental concentrations of zinc causing reduced population densities of this copepod in the field. It is proposed that B. zschokkei is an ecologically relevant test species for evaluating the potential effects of contaminants on freshwater invertebrates and for giving insight into the mode of action of a test chemical.


Subject(s)
Copepoda/drug effects , Reproduction/drug effects , Zinc/toxicity , Animals , Copepoda/growth & development , Copepoda/metabolism , Dose-Response Relationship, Drug , Fresh Water , Lethal Dose 50 , Toxicity Tests, Acute , Toxicity Tests, Chronic
16.
Mar Pollut Bull ; 51(8-12): 769-75, 2005.
Article in English | MEDLINE | ID: mdl-16023680

ABSTRACT

We previously described the genomic structure of the cytochrome P450 1A (CYP1A) gene from the hermaphroditic fish Rivulus marmoratus [Kim, I.-C., Kim, Y.J., Yoon, Y.-D, Kawamura, S., Lee, Y.-S., Lee, J.-S., 2004a. Cloning of cytochrome P450 1A (CYP1A) genes from the hermaphroditic fish Rivulus marmoratus and the Japanese medaka Oryzias latipes. Mar. Environ. Res. 58, 125-129]. To further characterize R. marmoratus CYP1A, we cloned the cDNA sequence of a CYP1A gene from this species and also expressed its recombinant protein in an E. coli system. We exposed R. marmoratus to 4-nonylphenol, and found a small induction of CYP1A mRNA in the treated animals. In this paper, we discuss the characteristics of R. marmoratus CYP1A gene as well as its potential use in a biomonitoring assay.


Subject(s)
Cyprinodontiformes/genetics , Cytochrome P-450 CYP1A1/genetics , Cytochrome P-450 CYP1A1/metabolism , Phylogeny , Amino Acid Sequence , Animals , Base Sequence , Cloning, Molecular , Cluster Analysis , DNA, Complementary/genetics , Enzyme Induction/drug effects , Molecular Sequence Data , Phenols/toxicity , Sequence Alignment , Sequence Analysis, DNA
17.
Sci Total Environ ; 512-513: 540-551, 2015 Apr 15.
Article in English | MEDLINE | ID: mdl-25644849

ABSTRACT

Environmental quality monitoring of water resources is challenged with providing the basis for safeguarding the environment against adverse biological effects of anthropogenic chemical contamination from diffuse and point sources. While current regulatory efforts focus on monitoring and assessing a few legacy chemicals, many more anthropogenic chemicals can be detected simultaneously in our aquatic resources. However, exposure to chemical mixtures does not necessarily translate into adverse biological effects nor clearly shows whether mitigation measures are needed. Thus, the question which mixtures are present and which have associated combined effects becomes central for defining adequate monitoring and assessment strategies. Here we describe the vision of the international, EU-funded project SOLUTIONS, where three routes are explored to link the occurrence of chemical mixtures at specific sites to the assessment of adverse biological combination effects. First of all, multi-residue target and non-target screening techniques covering a broader range of anticipated chemicals co-occurring in the environment are being developed. By improving sensitivity and detection limits for known bioactive compounds of concern, new analytical chemistry data for multiple components can be obtained and used to characterise priority mixtures. This information on chemical occurrence will be used to predict mixture toxicity and to derive combined effect estimates suitable for advancing environmental quality standards. Secondly, bioanalytical tools will be explored to provide aggregate bioactivity measures integrating all components that produce common (adverse) outcomes even for mixtures of varying compositions. The ambition is to provide comprehensive arrays of effect-based tools and trait-based field observations that link multiple chemical exposures to various environmental protection goals more directly and to provide improved in situ observations for impact assessment of mixtures. Thirdly, effect-directed analysis (EDA) will be applied to identify major drivers of mixture toxicity. Refinements of EDA include the use of statistical approaches with monitoring information for guidance of experimental EDA studies. These three approaches will be explored using case studies at the Danube and Rhine river basins as well as rivers of the Iberian Peninsula. The synthesis of findings will be organised to provide guidance for future solution-oriented environmental monitoring and explore more systematic ways to assess mixture exposures and combination effects in future water quality monitoring.


Subject(s)
Conservation of Natural Resources/methods , Environmental Monitoring/methods , Water Pollutants, Chemical/analysis , Water Resources/statistics & numerical data , Water Quality/standards
18.
Mar Environ Res ; 58(2-5): 101-5, 2004.
Article in English | MEDLINE | ID: mdl-15178020

ABSTRACT

The induction of hepatic cytochrome P450 1A (CYP 1A) is an important step in the response to contaminants such as polycyclic aromatic hydrocarbons (PAHs), and has been used as a biomarker of exposure in fish. Several consensus response elements have been identified, including eight potential xenobiotic response elements (XREs) in the promoter region of the European flounder cytochrome P450 1A gene. However not all of these sequences are necessarily active. To help elucidate the molecular regulation of this important gene, site directed mutagenesis and dual-luciferase reporter gene assays were employed to characterize the consensus transcription factor binding sites of the CYP 1A 5' flanking region. Mutation of response elements situated -1103, -859, -709 and -172 bases upstream of the transcription start site reduced the induction to 2.75, 1.51, 3.25 and 3.05 fold, respectively, compared with the full-length promoter (4.0-fold induction) on exposure to the PAH 3-methylcholanthrene (3MC) (1.0 microM). These results indicate that four out of eight different XREs are functional in the control of CYP 1A in the flounder. The activity of these response elements adds to the evidence for considerable diversity in vertebrate CYP 1A regulation.


Subject(s)
Cytochrome P-450 CYP1A1/biosynthesis , Flounder/metabolism , Gene Expression Regulation, Enzymologic , Response Elements/physiology , Animals , Biological Assay , Cells, Cultured , Cytochrome P-450 CYP1A1/genetics , DNA Primers , Enzyme Induction/genetics , Flounder/physiology , Genes, Reporter/genetics , Luciferases , Methylcholanthrene/metabolism , Mutagenesis, Site-Directed , Plasmids/genetics , Promoter Regions, Genetic/genetics , Response Elements/genetics , Transcription Factors/metabolism , Xenobiotics
19.
Mar Environ Res ; 54(3-5): 709-13, 2002.
Article in English | MEDLINE | ID: mdl-12408640

ABSTRACT

Concern over endocrine disrupters in coastal ecosystems has stimulated global efforts to understand their potential impacts on fish and invertebrate communities. Given that marine crustaceans are sensitive to the effects of alkylphenols and other xenobiotics, we are currently investigating whether these responses may be caused via an endocrine mechanism. Tisbe battagliai (Copepoda: Harpacticoida) is representative of an ecologically important group of meiofauna, is sensitive to toxicants and is used as an international test species in marine ecotoxicology. A 21-day life-cycle test that incorporates assessment of survival, development, reproduction and sex ratios, has shown that populations of T. battagliai are not significantly affected by environmentally relevant levels of steroidal oestrogen agonists, or by related synthetic receptor agonists. The absence of in vivo effects due to these steroid agonists and antagonists prompted in vitro studies of ecdysteroid receptor activity of a range of reference compounds and environmental contaminants with an ecdysteroid receptor (EcR/USP)-based screening assay derived from the BII haemocyte line of Drosophila melanogaster. The implications for environmental monitoring of endocrine disrupters are discussed.


Subject(s)
Copepoda/physiology , Drosophila melanogaster/physiology , Endocrine System/drug effects , Receptors, Steroid/drug effects , Reproduction/drug effects , Water Pollutants, Chemical/adverse effects , Animals , Biological Assay/methods , Estrogens/adverse effects , Estrogens/pharmacology , Life Cycle Stages , Receptors, Estrogen/drug effects , Receptors, Estrogen/physiology , Receptors, Steroid/physiology , Survival
20.
Mar Environ Res ; 58(2-5): 687-91, 2004.
Article in English | MEDLINE | ID: mdl-15178100

ABSTRACT

We cloned the vitellogenin gene from the self-fertilizing fish Rivulus marmoratus, and sequenced 12,326 bp. The number of exons of R. marmoratus and rainbow trout vitellogenin genes were different, and also the splicing junctions are different throughout most of the exons and introns but the amino acid similarity of R. marmoratus vitellogenin gene to other species was rather high. In promoter region of R. marmoratus vitellogenin gene, there were several E2 binding sites and the estrogen response element (ERE). We discuss here the gene structure and expression of R. marmoratus vitellogenin gene.


Subject(s)
Cyprinodontiformes/genetics , Vitellogenins/genetics , Amino Acid Sequence , Animals , Base Sequence , DNA Primers , Gene Components , Genomic Library , Molecular Sequence Data , Promoter Regions, Genetic/genetics , Response Elements/genetics , Sequence Alignment , Sequence Analysis, DNA
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