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1.
Mobile genetic elements from the maternal microbiome shape infant gut microbial assembly and metabolism.
Cell
; 185(26): 4921-4936.e15, 2022 12 22.
Article
in English
| MEDLINE | ID: mdl-36563663
2.
Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans.
Cell
; 165(4): 842-53, 2016 May 05.
Article
in English
| MEDLINE | ID: mdl-27133167
3.
Questioning the fetal microbiome illustrates pitfalls of low-biomass microbial studies.
Nature
; 613(7945): 639-649, 2023 01.
Article
in English
| MEDLINE | ID: mdl-36697862
4.
The evolution, evolvability and engineering of gene regulatory DNA.
Nature
; 603(7901): 455-463, 2022 03.
Article
in English
| MEDLINE | ID: mdl-35264797
5.
Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans.
Cell
; 165(6): 1551, 2016 Jun 02.
Article
in English
| MEDLINE | ID: mdl-27259157
6.
Longitudinal quantification of Bifidobacterium longum subsp. infantis reveals late colonization in the infant gut independent of maternal milk HMO composition.
Nat Commun
; 15(1): 894, 2024 Jan 30.
Article
in English
| MEDLINE | ID: mdl-38291346
7.
CRISPR-Cas-based identification of a sialylated human milk oligosaccharides utilization cluster in the infant gut commensal Bacteroides dorei.
Nat Commun
; 15(1): 105, 2024 Jan 02.
Article
in English
| MEDLINE | ID: mdl-38167825
8.
Implementation of pooled saliva tests for universal screening of cCMV infection.
Nat Med
; 30(4): 1111-1117, 2024 Apr.
Article
in English
| MEDLINE | ID: mdl-38459181
9.
High-resolution nucleosome mapping reveals transcription-dependent promoter packaging.
Genome Res
; 20(1): 90-100, 2010 Jan.
Article
in English
| MEDLINE | ID: mdl-19846608
10.
Comprehensive comparative analysis of strand-specific RNA sequencing methods.
Nat Methods
; 7(9): 709-15, 2010 Sep.
Article
in English
| MEDLINE | ID: mdl-20711195
11.
GENI: A web server to identify gene set enrichments in tumor samples.
Comput Struct Biotechnol J
; 21: 5531-5537, 2023.
Article
in English
| MEDLINE | ID: mdl-38034403
12.
Comparison of vaginal microbiota between women with inflammatory bowel disease and healthy controls.
PLoS One
; 18(11): e0284709, 2023.
Article
in English
| MEDLINE | ID: mdl-38019873
13.
Ab initio construction of a eukaryotic transcriptome by massively parallel mRNA sequencing.
Proc Natl Acad Sci U S A
; 106(9): 3264-9, 2009 Mar 03.
Article
in English
| MEDLINE | ID: mdl-19208812
14.
EasyMap - An Interactive Web Tool for Evaluating and Comparing Associations of Clinical Variables and Microbiome Composition.
Front Cell Infect Microbiol
; 12: 854164, 2022.
Article
in English
| MEDLINE | ID: mdl-35646745
15.
Preemies going pro: How probiotic treatment matures the microbiome of extreme premature infants.
Cell Host Microbe
; 30(5): 599-600, 2022 05 11.
Article
in English
| MEDLINE | ID: mdl-35550660
16.
Human milk oligosaccharides and the infant gut microbiome from an eco-evolutionary perspective.
Curr Opin Microbiol
; 68: 102156, 2022 08.
Article
in English
| MEDLINE | ID: mdl-35598464
17.
The Infant Gut Commensal Bacteroides dorei Presents a Generalized Transcriptional Response to Various Human Milk Oligosaccharides.
Front Cell Infect Microbiol
; 12: 854122, 2022.
Article
in English
| MEDLINE | ID: mdl-35372092
18.
Longitudinal disease-associated gut microbiome differences in infants with food protein-induced allergic proctocolitis.
Microbiome
; 10(1): 154, 2022 09 23.
Article
in English
| MEDLINE | ID: mdl-36138438
19.
Amniotic fluid biomarkers predict the severity of congenital cytomegalovirus infection.
J Clin Invest
; 132(11)2022 06 01.
Article
in English
| MEDLINE | ID: mdl-35439172
20.
Lessons learned from the prenatal microbiome controversy.
Microbiome
; 9(1): 8, 2021 01 12.
Article
in English
| MEDLINE | ID: mdl-33436098