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1.
J Virol ; 97(6): e0035623, 2023 06 29.
Article in English | MEDLINE | ID: mdl-37199648

ABSTRACT

Influenza C virus (ICV) is increasingly associated with community-acquired pneumonia (CAP) in children and its disease severity is worse than the influenza B virus, but similar to influenza A virus associated CAP. Despite the ubiquitous infection landscape of ICV in humans, little is known about its replication and pathobiology in animals. The goal of this study was to understand the replication kinetics, tissue tropism, and pathogenesis of human ICV (huICV) in comparison to the swine influenza D virus (swIDV) in guinea pigs. Intranasal inoculation of both viruses did not cause clinical signs, however, the infected animals shed virus in nasal washes. The huICV replicated in the nasal turbinates, soft palate, and trachea but not in the lungs while swIDV replicated in all four tissues. A comparative analysis of tropism and pathogenesis of these two related seven-segmented influenza viruses revealed that swIDV-infected animals exhibited broad tissue tropism with an increased rate of shedding on 3, 5, and 7 dpi and high viral loads in the lungs compared to huICV. Seroconversion occurred late in the huICV group at 14 dpi, while swIDV-infected animals seroconverted at 7 dpi. Guinea pigs infected with huICV exhibited mild to moderate inflammatory changes in the epithelium of the soft palate and trachea, along with mucosal damage and multifocal alveolitis in the lungs. In summary, the replication kinetics and pathobiological characteristics of ICV in guinea pigs agree with the clinical manifestation of ICV infection in humans, and hence guinea pigs could be used to study these distantly related influenza viruses. IMPORTANCE Similar to influenza A and B, ICV infections are seen associated with bacterial and viral co-infections which complicates the assessment of its real clinical significance. Further, the antivirals against influenza A and B viruses are ineffective against ICV which mandates the need to study the pathobiological aspects of this virus. Here we demonstrated that the respiratory tract of guinea pigs possesses specific viral receptors for ICV. We also compared the replication kinetics and pathogenesis of huICV and swIDV, as these viruses share 50% sequence identity. The tissue tropism and pathology associated with huICV in guinea pigs are analogous to the mild respiratory disease caused by ICV in humans, thereby demonstrating the suitability of guinea pigs to study ICV. Our comparative analysis revealed that huICV and swIDV replicated differentially in the guinea pigs suggesting that the type-specific genetic differences can result in the disparity of the viral shedding and tissue tropism.


Subject(s)
Disease Models, Animal , Gammainfluenzavirus , Guinea Pigs , Orthomyxoviridae Infections , Thogotovirus , Animals , Humans , Administration, Intranasal , Orthomyxoviridae Infections/pathology , Orthomyxoviridae Infections/virology , Receptors, Virus
2.
J Virol ; 96(3): e0192821, 2022 02 09.
Article in English | MEDLINE | ID: mdl-34787455

ABSTRACT

From 2014 to week 07/2020 the Centre for Health Protection in Hong Kong conducted screening for influenza C virus (ICV). A retrospective analysis of ICV detections to week 26/2019 revealed persistent low-level circulation with outbreaks occurring biennially in the winters of 2015 to 2016 and 2017 to 2018 (R. S. Daniels et al., J Virol 94:e01051-20, 2020, https://doi.org/10.1128/JVI.01051-20). Here, we report on an outbreak occurring in 2019 to 2020, reinforcing the observation of biennial seasonality in Hong Kong. All three outbreaks occurred in similar time frames, were subsequently dwarfed by seasonal epidemics of influenza types A and B, and were caused by similar proportions of C/Kanagawa/1/76 (K)-lineage and C/São Paulo/378/82 S1- and S2-sublineage viruses. Ongoing genetic drift was observed in all genes, with some evidence of amino acid substitution in the hemagglutinin-esterase-fusion (HEF) glycoprotein possibly associated with antigenic drift. A total of 61 ICV genomes covering the three outbreaks were analyzed for reassortment, and 9 different reassortant constellations were identified, 1 K-lineage, 4 S1-sublineage, and 4 S2-sublineage, with 6 of these being identified first in the 2019-1920 outbreak (2 S2-lineage and 4 S1-lineage). The roles that virus interference/enhancement, ICV persistent infection, genome evolution, and reassortment might play in the observed seasonality of ICV in Hong Kong are discussed. IMPORTANCE Influenza C virus (ICV) infection of humans is common, with the great majority of people being infected during childhood, though reinfection can occur throughout life. While infection normally results in "cold-like" symptoms, severe disease cases have been reported in recent years. However, knowledge of ICV is limited due to poor systematic surveillance and an inability to propagate the virus in large amounts in the laboratory. Following recent systematic surveillance in Hong Kong SAR, China, and direct ICV gene sequencing from clinical specimens, a 2-year cycle of disease outbreaks (epidemics) has been identified, with gene mixing playing a significant role in ICV evolution. Studies like those reported here are key to developing an understanding of the impact of influenza C virus infection in humans, notably where comorbidities exist and severe respiratory disease can develop.


Subject(s)
Disease Outbreaks , Gammainfluenzavirus/classification , Gammainfluenzavirus/genetics , Influenza, Human/epidemiology , Influenza, Human/virology , Reassortant Viruses , Hemagglutinins, Viral/chemistry , Hemagglutinins, Viral/genetics , Hong Kong/epidemiology , Humans , Models, Molecular , Mutation , Phylogeny , Public Health Surveillance , Sequence Analysis, DNA , Structure-Activity Relationship , Viral Fusion Proteins/chemistry , Viral Fusion Proteins/genetics
3.
J Med Virol ; 95(1): e28201, 2023 01.
Article in English | MEDLINE | ID: mdl-36210349

ABSTRACT

Sentinel surveillance of influenza-like illnesses revealed an increase in the cases of influenza C virus in children and adults in Austria, 2022, compared to previous years, following one season (2020/2021), wherein no influenza C virus was detected. Whole-genome sequencing revealed no obvious genetic basis for the increase. We propose that the reemergence is explained by waning immunity from lack of community exposure due to restrictions intended to limit severe acute respiratory syndrome coronavirus 2 spread in prior seasons, pending further investigation.


Subject(s)
COVID-19 , Gammainfluenzavirus , Influenza, Human , Humans , Adult , Child , Influenza, Human/epidemiology , Gammainfluenzavirus/genetics , Austria/epidemiology , Sentinel Surveillance , Seasons
4.
J Biol Chem ; 297(2): 100906, 2021 08.
Article in English | MEDLINE | ID: mdl-34157283

ABSTRACT

Sialic acids are nine-carbon sugars that frequently cap glycans at the cell surface in cells of vertebrates as well as cells of certain types of invertebrates and bacteria. The nine-carbon backbone of sialic acids can undergo extensive enzymatic modification in nature and O-acetylation at the C-4/7/8/9 position in particular is widely observed. In recent years, the detection and analysis of O-acetylated sialic acids have advanced, and sialic acid-specific O-acetyltransferases (SOATs) and O-acetylesterases (SIAEs) that add and remove O-acetyl groups, respectively, have been identified and characterized in mammalian cells, invertebrates, bacteria, and viruses. These advances now allow us to draw a more complete picture of the biosynthetic pathway of the diverse O-acetylated sialic acids to drive the generation of genetically and biochemically engineered model cell lines and organisms with altered expression of O-acetylated sialic acids for dissection of their roles in glycoprotein stability, development, and immune recognition, as well as discovery of novel functions. Furthermore, a growing number of studies associate sialic acid O-acetylation with cancer, autoimmunity, and infection, providing rationale for the development of selective probes and inhibitors of SOATs and SIAEs. Here, we discuss the current insights into the biosynthesis and biological functions of O-acetylated sialic acids and review the evidence linking this modification to disease. Furthermore, we discuss emerging strategies for the design, synthesis, and potential application of unnatural O-acetylated sialic acids and inhibitors of SOATs and SIAEs that may enable therapeutic targeting of this versatile sialic acid modification.


Subject(s)
Acetyltransferases/metabolism , Carboxylic Ester Hydrolases/metabolism , N-Acetylneuraminic Acid/metabolism , Polysaccharides/metabolism , Acetylation , Animals , Biosynthetic Pathways , Disease , Glycoproteins/metabolism , Humans , N-Acetylneuraminic Acid/chemistry , Polysaccharides/chemistry
5.
J Virol ; 95(21): e0129621, 2021 10 13.
Article in English | MEDLINE | ID: mdl-34406864

ABSTRACT

Influenza C virus (ICV) has only one kind of spike protein, the hemagglutinin-esterase (HE) glycoprotein. HE functions similarly to hemagglutinin (HA) and neuraminidase of the influenza A and B viruses (IAV and IBV, respectively). It has a monobasic site, which is cleaved by some host enzymes. The cleavage is essential to activating the virus, but the enzyme or enzymes in the respiratory tract have not been identified. This study investigated whether the host serine proteases, transmembrane protease serine S1 member 2 (TMPRSS2) and human airway trypsin-like protease (HAT), which reportedly cleave HA of IAV/IBV, are involved in HE cleavage. We established TMPRSS2- and HAT-expressing MDCK cells (MDCK-TMPRSS2 and MDCK-HAT). ICV showed multicycle replication with HE cleavage without trypsin in MDCK-TMPRSS2 cells as well as IAV did. The HE cleavage and multicycle replication did not appear in MDCK-HAT cells infected with ICV without trypsin, while HA cleavage and multistep growth of IAV appeared in the cells. Amino acid sequences of the HE cleavage site in 352 ICV strains were completely preserved. Camostat and nafamostat suppressed the growth of ICV and IAV in human nasal surface epithelial (HNE) cells. Therefore, this study revealed that, at least, TMPRSS2 is involved in HE cleavage and suggested that nafamostat could be a candidate for therapeutic drugs for ICV infection. IMPORTANCE Influenza C virus (ICV) is a pathogen that causes acute respiratory illness, mostly in children, but there are no anti-ICV drugs. ICV has only one kind of spike protein, the hemagglutinin-esterase (HE) glycoprotein on the virion surface, which possesses receptor-binding, receptor-destroying, and membrane fusion activities. The HE cleavage is essential for the virus to be activated, but the enzyme or enzymes in the respiratory tract have not been identified. This study revealed that transmembrane protease serine S1 member 2 (TMPRSS2), and not human airway trypsin-like protease (HAT), is involved in HE cleavage. This is a novel study on the host enzymes involved in HE cleavage, and the result suggests that the host enzymes, such as TMPRSS2, may be a target for therapeutic drugs of ICV infection.


Subject(s)
Gammainfluenzavirus/enzymology , Gammainfluenzavirus/metabolism , Hemagglutinins, Viral/metabolism , Influenza, Human/virology , Orthomyxoviridae Infections/virology , Serine Endopeptidases/metabolism , Viral Fusion Proteins/metabolism , Amino Acid Sequence , Animals , Antiviral Agents/pharmacology , Benzamidines/pharmacology , Cell Line , Cell Line, Tumor , Cells, Cultured , Dogs , Esters/pharmacology , Guanidines/pharmacology , Host Microbial Interactions , Humans , Madin Darby Canine Kidney Cells , Trypsin/metabolism , Viral Proteins/metabolism
6.
J Virol ; 94(21)2020 10 14.
Article in English | MEDLINE | ID: mdl-32817211

ABSTRACT

In 2014, the Centre for Health Protection in Hong Kong introduced screening for influenza C virus (ICV) as part of its routine surveillance for infectious agents in specimens collected from patients presenting with symptoms of respiratory viral infection, including influenza-like illness (ILI). A retrospective analysis of ICV detections up to week 26 of 2019 revealed persistent low-level circulation, with two outbreaks having occurred in the winters of 2015 to 2016 and 2017 to 2018. These outbreaks occurred at the same time as, and were dwarfed by, seasonal epidemics of influenza types A and B. Gene sequencing studies on stored ICV-positive clinical specimens from the two outbreaks have shown that the hemagglutinin-esterase (HE) genes of the viruses fall into two of the six recognized genetic lineages (represented by C/Kanagawa/1/76 and C/São Paulo/378/82), with there being significant genetic drift compared to earlier circulating viruses within both lineages. The location of a number of encoded amino acid substitutions in hemagglutinin-esterase fusion (HEF) glycoproteins suggests that antigenic drift may also have occurred. Observations of ICV outbreaks in other countries, with some of the infections being associated with severe disease, indicates that ICV infection has the potential to have significant clinical and health care impacts in humans.IMPORTANCE Influenza C virus infection of humans is common, and reinfection can occur throughout life. While symptoms are generally mild, severe disease cases have been reported, but knowledge of the virus is limited, as little systematic surveillance for influenza C virus is conducted and the virus cannot be studied by classical virologic methods because it cannot be readily isolated in laboratories. A combination of systematic surveillance in Hong Kong SAR, China, and new gene sequencing methods has been used in this study to assess influenza C virus evolution and provides evidence for a 2-year cycle of disease outbreaks. The results of studies like that reported here are key to developing an understanding of the impact of influenza C virus infection in humans and how virus evolution might be associated with epidemics.


Subject(s)
Disease Outbreaks , Gammainfluenzavirus/genetics , Hemagglutinins, Viral/genetics , Influenza, Human/epidemiology , Mutation , Viral Fusion Proteins/genetics , Adolescent , Adult , Aged , Amino Acid Substitution , Child , Child, Preschool , Epidemiological Monitoring , Female , Gene Expression , Hemagglutinins, Viral/chemistry , Hemagglutinins, Viral/metabolism , High-Throughput Nucleotide Sequencing , Hong Kong/epidemiology , Humans , Infant , Influenza, Human/pathology , Influenza, Human/virology , Gammainfluenzavirus/enzymology , Male , Middle Aged , Models, Molecular , Molecular Epidemiology , Phylogeny , Protein Conformation, alpha-Helical , Protein Conformation, beta-Strand , Retrospective Studies , Viral Fusion Proteins/chemistry , Viral Fusion Proteins/metabolism
7.
J Med Virol ; 92(2): 161-166, 2020 02.
Article in English | MEDLINE | ID: mdl-31498448

ABSTRACT

Unlike influenza A and B viruses that infect humans and cause severe diseases in seasonal epidemics, influenza C virus (ICV) is a ubiquitous childhood pathogen typically causing mild respiratory symptoms. ICV infections are rarely diagnosed and less research has been performed on it despite the virus being capable of causing severe disease in infants. Here we report on the isolation of a human ICV from a child with acute respiratory disease, provisionally designated C/Victoria/2/2012 (C/Vic). The full-length genome sequence and phylogenetic analysis revealed that the hemagglutinin-esterase-fusion (HEF) gene of C/Vic was derived from C/Sao Paulo lineage, while its PB2 and P3 genes evolved separately from all characterized historical ICV isolates. Furthermore, antigenic analysis using the hemagglutination inhibition (HI) assay found that 1947 C/Taylor virus (C/Taylor lineage) was antigenically more divergent from1966 C/Johannesburg (C/Aichi lineage) than from 2012 C/Vic. Structure modeling of the HEF protein identified two mutations in the 170-loop of the HEF protein around the receptor-binding pocket as a possible antigenic determinant responsible for the discrepant HI results. Taken together, results of our studies reveal novel insights into the genetic and antigenic evolution of ICV and provide a framework for further investigation of its molecular determinants of antigenic property and replication.


Subject(s)
Antigens, Viral/genetics , Gammainfluenzavirus/genetics , Gammainfluenzavirus/immunology , Influenza, Human/virology , Animals , Child , Dogs , Gene Expression Regulation, Viral , Genome, Viral , Humans , Madin Darby Canine Kidney Cells , Models, Molecular , Phylogeny , Protein Conformation , RNA, Viral/genetics , Viral Proteins/chemistry , Viral Proteins/genetics , Viral Proteins/metabolism
8.
BMC Infect Dis ; 20(1): 388, 2020 Jun 01.
Article in English | MEDLINE | ID: mdl-32487032

ABSTRACT

BACKGROUND: Neurogenic pulmonary edema is a rare but serious complication of febrile status epilepticus in children. Comprehensive screening for viral pathogens is seldomly performed in the work-up of febrile children. CASE PRESENTATION: A 22-month-old girl presented with her first episode of febrile status epilepticus, after which she developed acute pulmonary edema and respiratory failure. After the termination of seizure activity, the patient was intubated and managed on mechanical ventilation in the emergency room. The resolution of respiratory failure, as well as the neurological recovery, was achieved 9 h after admission, and the patient was discharged 6 days after admission without any complications. Molecular biological diagnostic methods identified the presence of human coronavirus HKU1, influenza C virus, and human parainfluenza virus 2 from the patient's nasopharyngeal specimens. CONCLUSIONS: Neurogenic pulmonary edema following febrile status epilepticus was suspected to be the etiology of our patient's acute pulmonary edema and respiratory failure. Timely seizure termination and rapid airway and respiratory intervention resulted in favorable outcomes of the patient. Molecular biological diagnostic methods identified three respiratory viruses; however, their relevance and association with clinical symptoms remain speculative.


Subject(s)
Pulmonary Edema/etiology , Respiratory Tract Infections/virology , Central Nervous System Diseases/etiology , Central Nervous System Diseases/therapy , Coronavirus/isolation & purification , Coronavirus Infections , Female , Fever/complications , Humans , Infant , Influenza, Human , Gammainfluenzavirus/isolation & purification , Molecular Diagnostic Techniques , Nasopharynx/virology , Parainfluenza Virus 2, Human/isolation & purification , Pulmonary Edema/diagnostic imaging , Pulmonary Edema/therapy , Respiratory Tract Infections/complications , Status Epilepticus
9.
Emerg Infect Dis ; 25(3): 607-609, 2019 03.
Article in English | MEDLINE | ID: mdl-30789339

ABSTRACT

We report 3 cases of influenza C virus in children hospitalized with severe acute respiratory infection in Cameroon. Two of these case-patients had grave clinical manifestations, but all 3 recovered. The lack of specific antiviral drugs for influenza C virus highlights the need to identify and describe cases involving this virus.


Subject(s)
Gammainfluenzavirus/genetics , Hospitalization , Influenza, Human/epidemiology , Influenza, Human/virology , Cameroon/epidemiology , Child, Preschool , Genes, Viral , Genome, Viral , Humans , Infant , Influenza, Human/diagnosis , Gammainfluenzavirus/classification , Phylogeny , Population Surveillance
10.
J Virol ; 92(2)2018 01 15.
Article in English | MEDLINE | ID: mdl-29118122

ABSTRACT

Influenza virus motility is based on cooperation between two viral spike proteins, hemagglutinin (HA) and neuraminidase (NA), and is a major determinant of virus infectivity. To translocate a virus particle on the cell surface, HA molecules exchange viral receptors and NA molecules accelerate the receptor exchange of HA. This type of virus motility was recently identified in influenza A virus (IAV). To determine if other influenza virus types have a similar receptor exchange mechanism-driven motility, we investigated influenza C virus (ICV) motility on a receptor-fixed glass surface. This system excludes receptor mobility, which makes it more desirable than a cell surface for demonstrating virus motility by receptor exchange. Like IAV, ICV was observed to move across the receptor-fixed surface. However, in contrast to the random movement of IAV, a filamentous ICV strain, Ann Arbor/1/50 (AA), moved in a straight line, in a directed manner, and at a constant rate, whereas a spherical ICV strain, Taylor/1233/47 (Taylor), moved randomly, similar to IAV. The AA and Taylor viruses each moved with a combination of gradual (crawling) and rapid (gliding) motions, but the distances of crawling and gliding for the AA virus were shorter than those of the Taylor virus. Our findings indicate that like IAV, ICV also has a motility that is driven by the receptor exchange mechanism. However, compared with IAV movement, filamentous ICV movement is highly regulated in both direction and speed. Control of ICV movement is based on its specific motility employing short crawling and gliding motions as well as its own filamentous morphology.IMPORTANCE Influenza virus enters into a host cell for infection via cellular endocytosis. Human influenza virus infects epithelial cells of the respiratory tract, the surfaces of which are hidden by abundant cilia that are inactive in endocytosis. An open question is the manner by which the virus migrates to endocytosis-active domains. In analyzing individual virus behaviors through single-virus tracking, we identified a novel function of the hemagglutinin and esterase of influenza C virus (ICV) as the motility machinery. Hemagglutinin iteratively exchanges a viral receptor, causing virus movement. Esterase degrades the receptors along the trajectory traveled by the virus and prevents the virus from moving backward, causing directional movement. We propose that ICV has a unique motile machinery directionally controlled via hemagglutinin sensing the receptor density manipulated by esterase.


Subject(s)
Gammainfluenzavirus/physiology , Gammainfluenzavirus/ultrastructure , Orthomyxoviridae Infections/virology , Animals , Chick Embryo , Hemagglutinin Glycoproteins, Influenza Virus/metabolism , Viral Proteins/metabolism , Virion/physiology , Virion/ultrastructure
11.
Emerg Infect Dis ; 24(10): 1926-1929, 2018 10.
Article in English | MEDLINE | ID: mdl-30226175

ABSTRACT

We identified influenza C virus (ICV) in samples from US cattle with bovine respiratory disease through real-time PCR testing and sequencing. Bovine ICV isolates had high nucleotide identities (≈98%) with each other and were closely related to human ICV strains (≈95%). Further research is needed to determine bovine ICV's zoonotic potential.


Subject(s)
Cattle Diseases/epidemiology , Cattle Diseases/virology , Gammainfluenzavirus/classification , Gammainfluenzavirus/genetics , Orthomyxoviridae Infections/veterinary , Respiratory Tract Infections/veterinary , Animals , Cattle , Cattle Diseases/history , History, 21st Century , Phylogeny , United States/epidemiology , Viral Matrix Proteins/genetics
12.
J Virol ; 91(22)2017 11 15.
Article in English | MEDLINE | ID: mdl-28878070

ABSTRACT

CM2 is the second membrane protein of the influenza C virus and has been demonstrated to play a role in the uncoating and genome packaging processes in influenza C virus replication. Although the effects of N-linked glycosylation, disulfide-linked oligomerization, and palmitoylation of CM2 on virus replication have been analyzed, the effect of the phosphorylation of CM2 on virus replication remains to be determined. In this study, a phosphorylation site(s) at residue 78 and/or 103 of CM2 was replaced with an alanine residue(s), and the effects of the loss of phosphorylation on influenza C virus replication were analyzed. No significant differences were observed in the packaging of the reporter gene between influenza C virus-like particles (VLPs) produced from 293T cells expressing wild-type CM2 and those from the cells expressing the CM2 mutants lacking the phosphorylation site(s). Reporter gene expression in HMV-II cells infected with VLPs containing the CM2 mutants was inhibited in comparison with that in cells infected with wild-type VLPs. The virus production of the recombinant influenza C virus possessing CM2 mutants containing a serine-to-alanine change at residue 78 was significantly lower than that of wild-type recombinant influenza C virus. Furthermore, the virus growth of the recombinant viruses possessing CM2 with a serine-to-aspartic acid change at position 78, to mimic constitutive phosphorylation, was virtually identical to that of the wild-type virus. These results suggest that phosphorylation of CM2 plays a role in efficient virus replication, probably through the addition of a negative charge to the Ser78 phosphorylation site.IMPORTANCE It is well-known that many host and viral proteins are posttranslationally modified by phosphorylation, which plays a role in the functions of these proteins. In influenza A and B viruses, phosphorylation of viral proteins NP, M1, NS1, and the nuclear export protein (NEP), which are not integrated into the membranes, affects the functions of these proteins, thereby affecting virus replication. However, it was reported that phosphorylation of the influenza A virus M2 ion channel protein, which is integrated into the membrane, has no effect on virus replication in vitro or in vivo We previously demonstrated that the influenza C virus CM2 ion channel protein is modified by N-glycosylation, oligomerization, palmitoylation, and phosphorylation and have analyzed the effects of these modifications, except phosphorylation, on virus replication. This is the first report demonstrating that phosphorylation of the influenza C virus CM2 ion channel protein, unlike that of the influenza A virus M2 protein, plays a role in virus replication.


Subject(s)
Gammainfluenzavirus/physiology , Influenza, Human/metabolism , Protein Processing, Post-Translational , Viral Matrix Proteins/metabolism , Virus Replication/physiology , Animals , Cell Line, Tumor , Dogs , Humans , Influenza, Human/genetics , Madin Darby Canine Kidney Cells , Mutation , Phosphorylation/genetics , Viral Matrix Proteins/genetics
13.
Clin Infect Dis ; 65(6): 1037-1039, 2017 Sep 15.
Article in English | MEDLINE | ID: mdl-28541414

ABSTRACT

Among 4200 adults who presented with acute respiratory symptoms at a variety of medical practice settings (November 2006 through May 2012), only 13 (0.3%) nasal/throat swabs were positive for influenza C. Influenza C was rarely associated with medical care visits in adults.


Subject(s)
Gammainfluenzavirus/isolation & purification , Influenza, Human/virology , Adolescent , Adult , Aged , Female , Humans , Influenza, Human/diagnosis , Male , Middle Aged , Nose/virology , Pharynx/virology , Respiratory Tract Diseases/diagnosis , Respiratory Tract Diseases/virology , Young Adult
15.
J Med Virol ; 86(5): 879-85, 2014 May.
Article in English | MEDLINE | ID: mdl-24122799

ABSTRACT

Due to the lack of rapid diagnostic tests, clinical features of Influenza C virus infections are poorly characterized. Respiratory infections in military recruits in eastern Finland were monitored between July 2004 and December 2005 in order to study the epidemiology and clinical picture of infections caused by this virus. Blood samples were obtained at entry and at the end of the military service, and during each episode of respiratory infection to measure antibody responses against 10 viral and 2 bacterial pathogens. If possible, sputum samples were collected during the acute phase of respiratory infection episodes. Symptoms of the episodes were recorded for comparison of the clinical picture caused by various infectious agents. Infection with influenza C virus was detected in 38 of 892 young men during their service. The virus usually caused a mild upper respiratory tract infection. Most typical clinical features of influenza C virus infection were cough, rhinitis, and hoarseness. A striking difference to infections caused by influenza A virus was the lack of fever. Influenza C virus is an important cause of a respiratory tract infection in army conscripts. Infections with this virus are usually mild but can be complicated in some cases.


Subject(s)
Gammainfluenzavirus/isolation & purification , Influenza, Human/epidemiology , Influenza, Human/pathology , Adolescent , Adult , Antibodies, Viral/blood , Finland/epidemiology , Humans , Influenza, Human/virology , Male , Military Personnel , Prevalence , Young Adult
16.
Influenza Other Respir Viruses ; 18(6): e13345, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38923307

ABSTRACT

BACKGROUND: Influenza viruses can cause zoonotic infections that pose public health risks. Surveillance of influenza A and B viruses is conducted globally; however, information on influenza C and D viruses is limited. Longitudinal monitoring of influenza C virus in humans has been conducted in several countries, but there has been no long-term monitoring of influenza D virus in humans. The public health risks associated with the influenza D virus therefore remain unknown. METHODS: We established a duplex real-time RT-PCR to detect influenza C and D viruses and analyzed respiratory specimens collected from 2144 patients in Japan with respiratory diseases between January 2018 and March 2023. We isolated viruses and conducted hemagglutination inhibition tests to examine antigenicity and focus reduction assays to determine susceptibility to the cap-dependent endonuclease inhibitor baloxavir marboxil. RESULTS: We detected three influenza C viruses belonging to the C/Kanagawa- or C/Sao Paulo-lineages, which recently circulated globally. None of the specimens was positive for the influenza D virus. The C/Yokohama/1/2022 strain, isolated from the specimen with the highest viral RNA load and belonging to the C/Kanagawa-lineage, showed similar antigenicity to the reference C/Kanagawa-lineage strain and was susceptible to baloxavir. CONCLUSIONS: Our duplex real-time RT-PCR is useful for the simultaneous detection of influenza C and D viruses from the same specimen. Adding the influenza D virus to the monitoring of the influenza C virus would help in assessing the public health risks posed by this virus.


Subject(s)
Dibenzothiepins , Gammainfluenzavirus , Influenza, Human , Pyridones , Triazines , Humans , Japan/epidemiology , Influenza, Human/virology , Influenza, Human/epidemiology , Triazines/pharmacology , Male , Female , Gammainfluenzavirus/isolation & purification , Gammainfluenzavirus/genetics , Middle Aged , Adult , Aged , Antiviral Agents/therapeutic use , Antiviral Agents/pharmacology , Morpholines , Hemagglutination Inhibition Tests , Child, Preschool , Child , Adolescent , Young Adult , Thogotovirus/genetics , Thogotovirus/isolation & purification , Thogotovirus/classification , Real-Time Polymerase Chain Reaction , Infant , Aged, 80 and over
17.
J Clin Virol ; 162: 105429, 2023 05.
Article in English | MEDLINE | ID: mdl-37031609

ABSTRACT

BACKGROUND: Influenza C virus is a pathogen that causes acute respiratory illness in children. The clinical information about this virus is limited because of the small number of isolated viruses compared to influenza A or B viruses. METHODS: A total of 60 influenza C viruses were isolated by clinical tests using cell culture methods conducted in one hospital and one clinic during the 15 years from 2006 to 2020. These 60 cases were retrospectively analyzed by comparing outpatients and inpatients. Moreover, isolated viruses were analyzed for genomic changes during the study period. RESULTS: All were younger than 7 years, and 73% of inpatients (19 out of 26) were under 2 years of age. A significant difference was found in the frequency of pneumonia, accounting for 45% and 4% of inpatients and outpatients, respectively. Most of the viruses isolated from 2006 to 2012 belonged to the S/A sublineage of the C/Sao Paulo lineage, but three sublineage viruses, including the S/A sublineage with K190N mutation, S/V sublineage, and C/Kanagawa lineage, have cocirculated since 2014. Moreover, S/A sublineage viruses were undergoing reassortment since 2014, suggesting significant changes in the virus, both antigenically and genetically. Of the 10 strains from patients with pneumonia, 7 were in the S/A sublineage, which had circulated from 2006 to 2012. CONCLUSION: Infants under 2 years of age were more likely to be hospitalized with pneumonia. The genomic changes that occurred in 2014 were suggested to affect the ability of the virus to spread.


Subject(s)
Gammainfluenzavirus , Influenza, Human , Infant , Child , Humans , Gammainfluenzavirus/genetics , Outpatients , Inpatients , Japan/epidemiology , Retrospective Studies , Brazil , Influenza, Human/epidemiology
18.
Virology ; 587: 109855, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37536021

ABSTRACT

Influenza C virus (ICV) was identified in five pediatric acute respiratory cases in Shandong. Co-infection with other respiratory viruses was detected in four of these cases. Two ICV genomes were obtained and clustered in the S1-sublineage of C/Sao Paulo/378/82, indicating that genetically diverse ICV strains have been circulating in mainland China.

19.
Emerg Microbes Infect ; 12(1): 2175593, 2023 Dec.
Article in English | MEDLINE | ID: mdl-36881645

ABSTRACT

Recent research have shown that influenza C virus (ICV) has a possible higher clinical impact than previously thought. But knowledge about ICV is limited compared with influenza A and B viruses, due to poor systematic surveillance and inability to propagate. Herein, a case infected with triple reassortant ICV was identified during an influenza A(H3N2) outbreak, which was the first report of ICV infection in mainland China. Phylogenetic analysis showed that this ICV was triple reassortant. Serological evidence revealed that the index case might be related to family-clustering infection. Therefore, it is essential to heighten surveillance for the prevalence and variation of ICV in China, during the COVID-19 pandemic.


Subject(s)
COVID-19 , Gammainfluenzavirus , Influenza, Human , Humans , Influenza, Human/epidemiology , Influenza A Virus, H3N2 Subtype/genetics , Pandemics , Phylogeny , China/epidemiology , Disease Outbreaks
20.
Virology ; 587: 109859, 2023 10.
Article in English | MEDLINE | ID: mdl-37544044

ABSTRACT

Bovine respiratory disease (BRD) complex is a multifactorial respiratory disease of cattle. Seven-segmented influenza C (ICV) and D (IDV) viruses have been identified in cattle with BRD, however, molecular epidemiology and prevalence of IDV and ICV in the diseased population remain poorly characterized. Here, we conducted a molecular screening of 208 lung samples of bovine pneumonia cases for the presence of IDV and ICV. Our results demonstrated that both viruses were prevalent in BRD cases and the overall positivity rates of IDV and ICV were 20.88% and 5.99% respectively. Further analysis of three IDV strains isolated from lungs of cattle with BRD showed that these lung-tropic strains belonged to D/Michigan/2019 clade and diverged antigenically from the circulating dominant IDV clades D/OK and D/660. Our results reveal that IDV and ICV are associated with BRD complex and support a role for IDV and ICV in the etiology of BRD.


Subject(s)
Bovine Respiratory Disease Complex , Cattle Diseases , Orthomyxoviridae Infections , Orthomyxoviridae , Thogotovirus , Viruses , Cattle , Animals , Orthomyxoviridae Infections/epidemiology , Orthomyxoviridae Infections/veterinary , Prevalence , Bovine Respiratory Disease Complex/epidemiology , Cattle Diseases/epidemiology
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