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1.
Nat Mater ; 20(5): 691-700, 2021 05.
Article in English | MEDLINE | ID: mdl-33432140

ABSTRACT

Biological systems assemble living materials that are autonomously patterned, can self-repair and can sense and respond to their environment. The field of engineered living materials aims to create novel materials with properties similar to those of natural biomaterials using genetically engineered organisms. Here, we describe an approach to fabricating functional bacterial cellulose-based living materials using a stable co-culture of Saccharomyces cerevisiae yeast and bacterial cellulose-producing Komagataeibacter rhaeticus bacteria. Yeast strains can be engineered to secrete enzymes into bacterial cellulose, generating autonomously grown catalytic materials and enabling DNA-encoded modification of bacterial cellulose bulk properties. Alternatively, engineered yeast can be incorporated within the growing cellulose matrix, creating living materials that can sense and respond to chemical and optical stimuli. This symbiotic culture of bacteria and yeast is a flexible platform for the production of bacterial cellulose-based engineered living materials with potential applications in biosensing and biocatalysis.


Subject(s)
Acetobacteraceae/growth & development , Cellulose/metabolism , Saccharomyces cerevisiae/growth & development , Acetobacteraceae/genetics , Coculture Techniques , Saccharomyces cerevisiae/genetics
2.
J Bacteriol ; 203(18): e0016221, 2021 08 20.
Article in English | MEDLINE | ID: mdl-34228496

ABSTRACT

Acetic acid bacteria grow while producing acetic acid, resulting in acidification of the culture. Limited reports elucidate the effect of changes in intracellular pH on transcriptional factors. In the present study, the intracellular pH of Komagataeibacter europaeus was monitored with a pH-sensitive green fluorescent protein, showing that the intracellular pH decreased from 6.3 to 4.7 accompanied by acetic acid production during cell growth. The leucine-responsive regulatory protein of K. europaeus (KeLrp) was used as a model to examine pH-dependent effects, and its properties were compared with those of the Escherichia coli ortholog (EcLrp) at different pH levels. The DNA-binding activities of EcLrp and KeLrp with the target DNA (Ec-ilvI and Ke-ilvI) were examined by gel mobility shift assays under various pH conditions. EcLrp showed the highest affinity with the target at pH 8.0 (Kd [dissociation constant], 0.7 µM), decreasing to a minimum of 3.4 µM at pH 4.0. Conversely, KeLrp did not show significant differences in binding affinity between pH 4 and 7 (Kd, 1.0 to 1.5 µM), and the highest affinity was at pH 5.0 (Kd, 1.0 µM). Circular dichroism spectroscopy revealed that the α-helical content of KeLrp was the highest at pH 5.0 (49%) and was almost unchanged while being maintained at >45% over a range of pH levels examined, while that of EcLrp decreased from its maximum (49% at pH 7.0) to its minimum (36% at pH 4.0). These data indicate that KeLrp is stable and functions over a wide range of intracellular pH levels. IMPORTANCE Lrp is a highly conserved transcriptional regulator found in bacteria and archaea and regulates transcriptions of various genes. The intracellular pH of acetic acid bacteria (AAB) changes accompanied by acetic acid production during cell growth. The Lrp of AAB K. europaeus (KeLrp) was structurally stable over a wide range of pH and maintained DNA-binding activity even at low pH compared with Lrp from E. coli living in a neutral environment. An in vitro experiment showed DNA-binding activity of KeLrp to the target varied with changes in pH. In AAB, change of the intracellular pH during a cell growth would be an important trigger in controlling the activity of Lrp in vivo.


Subject(s)
Acetic Acid/metabolism , Acetobacteraceae/genetics , DNA-Binding Proteins/metabolism , Leucine-Responsive Regulatory Protein/genetics , Leucine-Responsive Regulatory Protein/metabolism , Acetobacteraceae/growth & development , DNA, Bacterial/genetics , DNA, Bacterial/metabolism , DNA-Binding Proteins/genetics , Escherichia coli/genetics , Gene Expression Regulation, Bacterial , Green Fluorescent Proteins/metabolism , Hydrogen-Ion Concentration , Leucine-Responsive Regulatory Protein/chemistry , Protein Binding
3.
PLoS Biol ; 15(4): e2000862, 2017 04.
Article in English | MEDLINE | ID: mdl-28441450

ABSTRACT

Choosing the right nutrients to consume is essential to health and wellbeing across species. However, the factors that influence these decisions are poorly understood. This is particularly true for dietary proteins, which are important determinants of lifespan and reproduction. We show that in Drosophila melanogaster, essential amino acids (eAAs) and the concerted action of the commensal bacteria Acetobacter pomorum and Lactobacilli are critical modulators of food choice. Using a chemically defined diet, we show that the absence of any single eAA from the diet is sufficient to elicit specific appetites for amino acid (AA)-rich food. Furthermore, commensal bacteria buffer the animal from the lack of dietary eAAs: both increased yeast appetite and decreased reproduction induced by eAA deprivation are rescued by the presence of commensals. Surprisingly, these effects do not seem to be due to changes in AA titers, suggesting that gut bacteria act through a different mechanism to change behavior and reproduction. Thus, eAAs and commensal bacteria are potent modulators of feeding decisions and reproductive output. This demonstrates how the interaction of specific nutrients with the microbiome can shape behavioral decisions and life history traits.


Subject(s)
Acetobacter/physiology , Amino Acids, Essential/metabolism , Drosophila melanogaster/microbiology , Feeding Behavior , Gastrointestinal Microbiome , Lactobacillus/physiology , Symbiosis , Acetobacter/genetics , Acetobacter/growth & development , Acetobacteraceae/genetics , Acetobacteraceae/growth & development , Acetobacteraceae/physiology , Amino Acids, Essential/administration & dosage , Amino Acids, Essential/analysis , Amino Acids, Essential/deficiency , Animals , Animals, Genetically Modified , Appetite Regulation , Behavior, Animal , Complex Mixtures/administration & dosage , Complex Mixtures/chemistry , Drosophila Proteins/antagonists & inhibitors , Drosophila Proteins/genetics , Drosophila Proteins/metabolism , Drosophila melanogaster/genetics , Drosophila melanogaster/physiology , Enterococcus faecalis/genetics , Enterococcus faecalis/growth & development , Enterococcus faecalis/physiology , Female , Food Preferences , Gene Knockout Techniques , Host-Parasite Interactions , Lactobacillus/genetics , Lactobacillus/growth & development , Oviposition , Species Specificity , Yeast, Dried/chemistry
4.
Appl Microbiol Biotechnol ; 103(16): 6673-6688, 2019 Aug.
Article in English | MEDLINE | ID: mdl-31168651

ABSTRACT

Ethanol exerts a strong positive effect on the cellulose yields from the widely exploited microbial producers of the Komagataeibacter genus. Ethanol is postulated to provide an alternative energy source, enabling effective use of glucose for cellulose biosynthesis rather than for energy acquisition. In this paper, we investigate the effect of ethanol supplementation on the global gene expression profile of Komagataeibacter xylinus E25 using RNA sequencing technology (RNA-seq). We demonstrate that when ethanol is present in the culture medium, glucose metabolism is directed towards cellulose production due to the induction of genes related to UDP-glucose formation and the repression of genes involved in glycolysis and acetan biosynthesis. Transcriptional changes in the pathways of cellulose biosynthesis and c-di-GMP metabolism are also described. The transcript level profiles suggest that Schramm-Hestrin medium supplemented with ethanol promotes bacterial growth by inducing protein biosynthesis and iron uptake. We observed downregulation of genes encoding transposases of the IS110 family which may provide one line of evidence explaining the positive effect of ethanol supplementation on the genotypic stability of K. xylinus E25. The results of this study increase knowledge and understanding of the regulatory effects imposed by ethanol on cellulose biosynthesis, providing new opportunities for directed strain improvement, scaled-up bionanocellulose production, and wider industrial exploitation of the Komagataeibacter species as bacterial cellulose producers.


Subject(s)
Acetobacteraceae/growth & development , Acetobacteraceae/metabolism , Cellulose/biosynthesis , Ethanol/metabolism , Culture Media/chemistry , Gene Expression Profiling , Gene Expression Regulation, Bacterial/drug effects , Glucose/metabolism , Metabolic Networks and Pathways/genetics
5.
Food Microbiol ; 65: 95-104, 2017 Aug.
Article in English | MEDLINE | ID: mdl-28400025

ABSTRACT

Buckwheat sourdoughs supplemented with molasses as natural sucrose source were fermented with levan-producing Gluconobacter (G.) albidus TMW 2.1191 and Kozakia (K.) baliensis NBRC 16680. Cell growth, concomitant levan and low-molecular-weight metabolite production were monitored. Sourdough breads were prepared with different sourdoughs from both strains (24, 30 and 48 h fermentation, respectively) and analyzed with respect to bread volume, crumb hardness and sensory characteristics. During fermentation, levan, acetic and gluconic acids were increasingly produced, while spontaneously co-growing lactic acid bacteria additionally formed acetic and lactic acids. Sourdoughs from both strains obtained upon 24 h of fermentation significantly improved the bread sensory and quality, including higher specific volume as well as lower crumb hardness. Buckwheat doughs containing isolated levan, with similar molecular size and mass compared to in situ produced levan in the sourdough at 48 h, verified the positive effect of levan on bread quality. However, the positive effects of levan were masked to a certain extent by the impact from the natural acidification during fermentations. While levan-producing acetic acid bacteria are a promising alternative for the development of clean-label gluten-free breads without the need of additives, an appropriate balance between acidification and levan production (amount and structure) must be reached.


Subject(s)
Acetic Acid/metabolism , Acetobacteraceae/metabolism , Bread/microbiology , Fagopyrum/microbiology , Fructans/biosynthesis , Gluconobacter/metabolism , Acetobacteraceae/growth & development , Antineoplastic Agents , Bacteria/metabolism , Bread/analysis , Fermentation , Flour/microbiology , Food Microbiology , Fructans/metabolism , Gluconobacter/growth & development , Glutens , Lactobacillaceae/growth & development , Lactobacillaceae/metabolism
6.
Proc Natl Acad Sci U S A ; 111(34): 12498-503, 2014 Aug 26.
Article in English | MEDLINE | ID: mdl-25114252

ABSTRACT

Over evolutionary time, Wolbachia has been repeatedly transferred between host species contributing to the widespread distribution of the symbiont in arthropods. For novel infections to be maintained, Wolbachia must infect the female germ line after being acquired by horizontal transfer. Although mechanistic examples of horizontal transfer exist, there is a poor understanding of factors that lead to successful vertical maintenance of the acquired infection. Using Anopheles mosquitoes (which are naturally uninfected by Wolbachia) we demonstrate that the native mosquito microbiota is a major barrier to vertical transmission of a horizontally acquired Wolbachia infection. After injection into adult Anopheles gambiae, some strains of Wolbachia invade the germ line, but are poorly transmitted to the next generation. In Anopheles stephensi, Wolbachia infection elicited massive blood meal-induced mortality, preventing development of progeny. Manipulation of the mosquito microbiota by antibiotic treatment resulted in perfect maternal transmission at significantly elevated titers of the wAlbB Wolbachia strain in A. gambiae, and alleviated blood meal-induced mortality in A. stephensi enabling production of Wolbachia-infected offspring. Microbiome analysis using high-throughput sequencing identified that the bacterium Asaia was significantly reduced by antibiotic treatment in both mosquito species. Supplementation of an antibiotic-resistant mutant of Asaia to antibiotic-treated mosquitoes completely inhibited Wolbachia transmission and partly contributed to blood meal-induced mortality. These data suggest that the components of the native mosquito microbiota can impede Wolbachia transmission in Anopheles. Incompatibility between the microbiota and Wolbachia may in part explain why some hosts are uninfected by this endosymbiont in nature.


Subject(s)
Anopheles/microbiology , Wolbachia/growth & development , Acetobacteraceae/drug effects , Acetobacteraceae/growth & development , Animals , Anti-Bacterial Agents/pharmacology , Biological Evolution , Disease Transmission, Infectious , Female , Infectious Disease Transmission, Vertical , Microbiota/drug effects , Ovum/microbiology , Symbiosis
7.
Microb Cell Fact ; 15(1): 170, 2016 Oct 04.
Article in English | MEDLINE | ID: mdl-27716345

ABSTRACT

BACKGROUND: Acetic acid bacteria (AAB) are well known producers of commercially used exopolysaccharides, such as cellulose and levan. Kozakia (K.) baliensis is a relatively new member of AAB, which produces ultra-high molecular weight levan from sucrose. Throughout cultivation of two K. baliensis strains (DSM 14400, NBRC 16680) on sucrose-deficient media, we found that both strains still produce high amounts of mucous, water-soluble substances from mannitol and glycerol as (main) carbon sources. This indicated that both Kozakia strains additionally produce new classes of so far not characterized EPS. RESULTS: By whole genome sequencing of both strains, circularized genomes could be established and typical EPS forming clusters were identified. As expected, complete ORFs coding for levansucrases could be detected in both Kozakia strains. In K. baliensis DSM 14400 plasmid encoded cellulose synthase genes and fragments of truncated levansucrase operons could be assigned in contrast to K. baliensis NBRC 16680. Additionally, both K. baliensis strains harbor identical gum-like clusters, which are related to the well characterized gum cluster coding for xanthan synthesis in Xanthomanas campestris and show highest similarity with gum-like heteropolysaccharide (HePS) clusters from other acetic acid bacteria such as Gluconacetobacter diazotrophicus and Komagataeibacter xylinus. A mutant strain of K. baliensis NBRC 16680 lacking EPS production on sucrose-deficient media exhibited a transposon insertion in front of the gumD gene of its gum-like cluster in contrast to the wildtype strain, which indicated the essential role of gumD and of the associated gum genes for production of these new EPS. The EPS secreted by K. baliensis are composed of glucose, galactose and mannose, respectively, which is in agreement with the predicted sugar monomer composition derived from in silico genome analysis of the respective gum-like clusters. CONCLUSIONS: By comparative sugar monomer and genome analysis, the polymeric substances secreted by K. baliensis can be considered as unique HePS. Via genome sequencing of K. baliensis DSM 14400 + NBRC 16680 we got first insights into the biosynthesis of these novel HePS, which is related to xanthan and acetan biosynthesis. Consequently, the present study provides the basis for establishment of K. baliensis strains as novel microbial cell factories for biotechnologically relevant, unique polysaccharides.


Subject(s)
Acetic Acid/metabolism , Acetobacteraceae/genetics , Acetobacteraceae/metabolism , Genome, Bacterial , Polysaccharides, Bacterial/biosynthesis , Acetobacteraceae/growth & development , Bacterial Proteins/genetics , Base Sequence , Cellulose/biosynthesis , Cellulose/genetics , Computer Simulation , DNA Transposable Elements , Fructans/biosynthesis , Gluconacetobacter xylinus/genetics , Glycerol/metabolism , Mannitol/metabolism , Operon , Polysaccharides, Bacterial/chemistry , Polysaccharides, Bacterial/genetics , Sequence Analysis, DNA , Sucrose/metabolism
8.
Mol Ther ; 23(1): 147-57, 2015 Jan.
Article in English | MEDLINE | ID: mdl-25288370

ABSTRACT

There are five genetic forms of chronic granulomatous disease (CGD), resulting from mutations in any of five subunits of phagocyte oxidase, an enzyme complex in neutrophils, monocytes, and macrophages that produces microbicidal reactive oxygen species. We generated induced pluripotent stem cells (iPSCs) from peripheral blood CD34(+) hematopoietic stem cells of patients with each of five CGD genotypes. We used zinc finger nuclease (ZFN) targeting the AAVS1 safe harbor site together with CGD genotype-specific minigene plasmids with flanking AAVS1 sequence to target correction of iPSC representing each form of CGD. We achieved targeted insertion with constitutive expression of desired oxidase subunit in 70-80% of selected iPSC clones. Neutrophils and macrophages differentiated from corrected CGD iPSCs demonstrated restored oxidase activity and antimicrobial function against CGD bacterial pathogens Staphylococcus aureus and Granulibacter bethesdensis. Using a standard platform that combines iPSC generation from peripheral blood CD34(+) cells and ZFN mediated AAVS1 safe harbor minigene targeting, we demonstrate efficient generation of genetically corrected iPSCs using an identical approach for all five genetic forms of CGD. This safe harbor minigene targeting platform is broadly applicable to a wide range of inherited single gene metabolic disorders.


Subject(s)
Dependovirus/genetics , Granulomatous Disease, Chronic/therapy , Hematopoietic Stem Cells/metabolism , Induced Pluripotent Stem Cells/metabolism , NADPH Oxidases/genetics , Acetobacteraceae/growth & development , Acetobacteraceae/immunology , Cell Differentiation , Gene Expression , Genetic Therapy/methods , Genetic Vectors , Genotype , Granulomatous Disease, Chronic/genetics , Granulomatous Disease, Chronic/metabolism , Granulomatous Disease, Chronic/pathology , Hematopoietic Stem Cells/pathology , Humans , Induced Pluripotent Stem Cells/pathology , Macrophages/immunology , Macrophages/microbiology , Macrophages/pathology , NADPH Oxidases/metabolism , Neutrophils/immunology , Neutrophils/microbiology , Neutrophils/pathology , Staphylococcus aureus/growth & development , Staphylococcus aureus/immunology , Zinc Fingers/genetics
9.
Appl Environ Microbiol ; 81(7): 2265-73, 2015 Apr.
Article in English | MEDLINE | ID: mdl-25595769

ABSTRACT

Acetoin in vinegar is an attractant to fruit flies when combined with acetic acid. To make vinegar more effective in attracting fruit flies with increased acetoin production, Komagataeibacter europaeus KGMA0119 was modified by specific gene disruption of the acetohydroxyacid isomeroreductase gene (ilvC). A previously constructed mutant lacking the putative ligand-sensing region in the leucine-responsive regulatory protein (KeLrp, encoded by Kelrp) was also used. The ilvC and Kelrp disruptants (KGMA5511 and KGMA7203, respectively) produced greater amounts of acetoin (KGMA5511, 0.11%; KGMA7203, 0.13%) than the wild-type strain KGMA0119 (0.069%). KGMA7203 produced a trace amount of isobutyric acid (0.007%), but the other strains did not. These strains produced approximately equal amounts of acetic acid (0.7%). The efficiency of fruit fly attraction was investigated with cultured Drosophila melanogaster. D. melanogaster flies (approximately 1,500) were released inside a cage (2.5 m by 2.5 m by 1.5 m) and were trapped with a device containing vinegar and a sticky sheet. The flies trapped on the sticky sheet were counted. The cell-free supernatant from KGMA7203 culture captured significantly more flies (19.36 to 36.96% of released flies) than did KGMA0119 (3.25 to 11.40%) and KGMA5511 (6.87 to 21.50%) cultures. Contrastingly, a 0.7% acetic acid solution containing acetoin (0.13%) and isobutyric acid (0.007%), which mimicked the KGMA7203 supernatant, captured significantly fewer flies (0.88 to 4.57%). Furthermore, the KGMA0119 supernatant with additional acetoin (0.13%) and isobutyric acid (0.007%) captured slightly more flies than the original KGMA0119 supernatant but fewer than the KGMA7203 supernatant, suggesting that the synergistic effects of acetic acid, acetoin, isobutyric acid, and unidentified metabolites achieved the efficient fly trapping of the KGMA7203 supernatant.


Subject(s)
Acetobacteraceae/metabolism , Acetoin/metabolism , Behavior, Animal/drug effects , Chemotactic Factors/metabolism , Drosophila melanogaster/drug effects , Entomology/methods , Metabolic Engineering , Acetobacteraceae/genetics , Acetobacteraceae/growth & development , Animals , Culture Media/chemistry , DNA, Bacterial/chemistry , DNA, Bacterial/genetics , Drosophila melanogaster/physiology , Gene Deletion , Ketol-Acid Reductoisomerase/genetics , Molecular Sequence Data , Sequence Analysis, DNA
10.
Appl Microbiol Biotechnol ; 99(16): 6677-91, 2015 Aug.
Article in English | MEDLINE | ID: mdl-25957154

ABSTRACT

Fruit peels, also known as rinds or skins, are wastes readily available in large quantities. Here, we have used pineapple (PA) and watermelon (WM) peels as substrates in the culture media (containing 5 % sucrose and 0.7 % ammonium sulfate) for production of bacterial cellulose (BC). The bacterial culture used in the study, Komagataeibacter hansenii produced BC under static conditions as a pellicle at the air-liquid interface in standard Hestrin and Schramm (HS) medium. The yield obtained was ~3.0 g/100 ml (on a wet weight basis). The cellulosic nature of the pellicle was confirmed by CO2, H2O, N2, and SO2 (CHNS) analysis and Fourier transform infrared (FT-IR) spectroscopy. Scanning electron microscopy (SEM) and atomic force microscopy (AFM) of the pellicle revealed the presence of flat twisted ribbonlike fibrils (70-130 nm wide). X-ray diffraction analysis proved its crystalline nature (matching cellulose I) with a crystallinity index of 67 %. When K. hansenii was grown in PA and WM media, BC yields were threefolds or fourfolds higher than those obtained in HS medium. Interestingly, textural characterization tests (viz., SEM, crystallinity index, resilience, hardness, adhesiveness, cohesiveness, springiness, shear energy and stress, and energy required for puncturing the pellicle) proved that the quality of BC produced in PA and WM media was superior to the BC produced in HS medium. These findings demonstrate the utility of the newly designed media for getting higher yields and better quality of BC, which could make fermentative production of BC more attractive on a commercial scale.


Subject(s)
Acetobacteraceae/growth & development , Acetobacteraceae/metabolism , Ananas/metabolism , Cellulose/biosynthesis , Citrullus/metabolism , Culture Media/chemistry , Cellulose/chemistry , Chemical Phenomena , Industrial Waste , Microscopy, Atomic Force , Microscopy, Electron, Scanning , Spectroscopy, Fourier Transform Infrared , X-Ray Diffraction
11.
Appl Environ Microbiol ; 80(4): 1528-38, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24362425

ABSTRACT

The effect of the growth medium used on the matrix-assisted laser desorption ionization-time of flight (MALDI-TOF) mass spectra generated and its consequences for species and strain level differentiation of acetic acid bacteria (AAB) were determined by using a set of 25 strains. The strains were grown on five different culture media that yielded a total of more than 600 mass spectra, including technical and biological replicates. The results demonstrate that the culture medium can have a profound effect on the mass spectra of AAB as observed in the presence and varying signal intensities of peak classes, in particular when culture media do not sustain optimal growth. The observed growth medium effects do not disturb species level differentiation but strongly affect the potential for strain level differentiation. The data prove that a well-constructed and robust MALDI-TOF mass spectrometry identification database should comprise mass spectra of multiple reference strains per species grown on different culture media to facilitate species and strain level differentiation.


Subject(s)
Acetobacteraceae/chemistry , Acetobacteraceae/classification , Bacteriological Techniques/methods , Culture Media/chemistry , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Acetobacteraceae/growth & development
12.
Biotechnol J ; 19(6): e2300529, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38896375

ABSTRACT

Industrial production of bacterial cellulose (BC) remains challenging due to significant production costs, including the choice of appropriate growth media. This research focuses on optimization of cheese whey (CW) based media for enhanced production of BC. Two modifications were made for CW medium for BC production with Komagataeibacter rhaeticus MSCL 1463. BC production in a medium of enzymatically hydrolyzed CW (final concentration of monosaccharides: glucose 0.13 g L-1, galactose 1.24 g L-1) was significantly enhanced, achieving a yield of 4.95 ± 0.25 g L-1, which markedly surpasses the yields obtained with the standard Hestrin-Schramm (HS) medium containing 20 g L-1 glucose and acid-hydrolyzed CW (final concentration of monosaccharides: glucose 1.15 g L-1, galactose 2.01 g L-1), which yielded 3.29 ± 0.12 g L-1 and 1.01 ± 0.14 g L-1, respectively. We explored the synergistic effects of combining CW with various agricultural by-products (corn steep liquor (CSL), apple juice, and sugar beet molasses). Notably, the supplementation with 15% corn steep liquor significantly enhanced BC productivity, achieving 6.97 ± 0.17 g L-1. A comprehensive analysis of the BC's physical and mechanical properties indicated significant alterations in fiber diameter (62-167 nm), crystallinity index (71.1-85.9%), and specific strength (35-82 MPa × cm3 g-1), as well as changes in the density (1.1-1.4 g cm-3). Hydrolyzed CW medium supplemented by CSL could be used for effective production of BC.


Subject(s)
Acetobacteraceae , Cellulose , Cheese , Culture Media , Whey , Cellulose/metabolism , Whey/metabolism , Cheese/microbiology , Culture Media/chemistry , Hydrolysis , Acetobacteraceae/metabolism , Acetobacteraceae/growth & development , Fermentation , Zea mays/metabolism , Glucose/metabolism , Fruit and Vegetable Juices
13.
Food Funct ; 12(9): 4015-4020, 2021 May 11.
Article in English | MEDLINE | ID: mdl-33978026

ABSTRACT

Kombucha is a traditional beverage obtained by the fermentation of sugared tea by a symbiotic culture of bacteria and yeast which has recently re-emerged as a popular lifestyle product with potential health benefits. The characteristic feature of kombucha is the formation of a cellulosic biofilm due to the excretion of bacterial cellulose with high purity and crystallinity. Despite the growing industrial and technological interest in kombucha, current characterization techniques rely on the periodic sampling of tea broth or biofilm and ex situ analysis of its biochemical or microbial composition. Here, we use interfacial shear rheology (ISR) for the transient in situ determination of kombucha biofilm growth directly at the interface. ISR revealed that kombucha biofilm formation is a two step process with clearly distinguishable growth phases. The first phase can be attributed to the initial adsorption of bacteria at the air-water interface and shows great variability, probably due to varying bacteria content and composition. The second phase is initiated by bacterial cellulose excretion and shows astonishing reproducibility regarding onset and final mechanical properties. Hence, ISR qualifies as a new in situ characterization technique for kombucha biofilm growth and bacterial cellulose production.


Subject(s)
Acetobacteraceae/growth & development , Biofilms/growth & development , Kombucha Tea/microbiology , Acetobacteraceae/metabolism , Cellulose/metabolism , Elasticity , Fermentation , Rheology
14.
Nat Commun ; 12(1): 5027, 2021 08 19.
Article in English | MEDLINE | ID: mdl-34413311

ABSTRACT

Engineered living materials (ELMs) based on bacterial cellulose (BC) offer a promising avenue for cheap-to-produce materials that can be programmed with genetically encoded functionalities. Here we explore how ELMs can be fabricated in a modular fashion from millimetre-scale biofilm spheroids grown from shaking cultures of Komagataeibacter rhaeticus. Here we define a reproducible protocol to produce BC spheroids with the high yield bacterial cellulose producer K. rhaeticus and demonstrate for the first time their potential for their use as building blocks to grow ELMs in 3D shapes. Using genetically engineered K. rhaeticus, we produce functionalized BC spheroids and use these to make and grow patterned BC-based ELMs that signal within a material and can sense and report on chemical inputs. We also investigate the use of BC spheroids as a method to regenerate damaged BC materials and as a way to fuse together smaller material sections of cellulose and synthetic materials into a larger piece. This work improves our understanding of BC spheroid formation and showcases their great potential for fabricating, patterning and repairing ELMs based on the promising biomaterial of bacterial cellulose.


Subject(s)
Acetobacteraceae/growth & development , Bioengineering/methods , Biofilms , Cellulose/chemistry , Genetic Engineering/methods , Regenerative Medicine/methods , Acetobacteraceae/chemistry , Acetobacteraceae/isolation & purification , Cellulose/isolation & purification
15.
Cell Rep ; 35(3): 108992, 2021 04 20.
Article in English | MEDLINE | ID: mdl-33882310

ABSTRACT

Plant-nectar-derived sugar is the major energy source for mosquitoes, but its influence on vector competence for malaria parasites remains unclear. Here, we show that Plasmodium berghei infection of Anopheles stephensi results in global metabolome changes, with the most significant impact on glucose metabolism. Feeding on glucose or trehalose (the main hemolymph sugars) renders the mosquito more susceptible to Plasmodium infection by alkalizing the mosquito midgut. The glucose/trehalose diets promote proliferation of a commensal bacterium, Asaia bogorensis, that remodels glucose metabolism in a way that increases midgut pH, thereby promoting Plasmodium gametogenesis. We also demonstrate that the sugar composition from different natural plant nectars influences A. bogorensis growth, resulting in a greater permissiveness to Plasmodium. Altogether, our results demonstrate that dietary glucose is an important determinant of mosquito vector competency for Plasmodium, further highlighting a key role for mosquito-microbiota interactions in regulating the development of the malaria parasite.


Subject(s)
Acetobacteraceae/metabolism , Anopheles/metabolism , Glucose/pharmacology , Metabolome , Mosquito Vectors/metabolism , Trehalose/pharmacology , Acetobacteraceae/growth & development , Animals , Anopheles/drug effects , Anopheles/microbiology , Anopheles/parasitology , Digestive System/microbiology , Digestive System/parasitology , Female , Gametogenesis/drug effects , Gametogenesis/genetics , Gene Expression Regulation , Glucose/metabolism , Host-Pathogen Interactions/genetics , Hydrogen-Ion Concentration , Life Cycle Stages/drug effects , Life Cycle Stages/genetics , Malaria/parasitology , Microbiota/genetics , Mosquito Vectors/drug effects , Mosquito Vectors/microbiology , Mosquito Vectors/parasitology , Plasmodium berghei/genetics , Plasmodium berghei/growth & development , Plasmodium berghei/metabolism , Protozoan Proteins/genetics , Protozoan Proteins/metabolism , Symbiosis/genetics , Trehalose/metabolism
16.
Int J Biol Macromol ; 150: 1113-1120, 2020 May 01.
Article in English | MEDLINE | ID: mdl-31739023

ABSTRACT

Bacterial nanocellulose (BNC) is a renewable and biodegradable biopolymer which has currently received considerable attention due to the rapid increase in environmental issues. In this study, a cost-effective strategy for BNC production was successfully improved in the adapted strain, C30, which was obtained from Komagataeibacter xylinus MSKU 12 by a repetitive cultivation in a low-cost coconut water containing acetic acid and ethanol (CW-AE medium) at 37 °C. The adaptive procedure allowed the strain C30 to be adapted to grow and produce BNC with a higher yield in a limiting nutrient CW-AE medium, than that in a standard HS-AE medium. This strain could produce a high yield of BNC (9.69 g/L dry weight) in a low-cost medium, a modified CW-AE medium supplemented with sucrose and ammonium sulfate. Moreover, SEM images showed that BNC pellicle produced by the strain C30 in the modified CW-AE medium exhibited finer nanofibrils with a narrower range of width compared with those of MSKU 12 while no significant differences in their physicochemical characteristics were detected among these BNCs produced. Therefore, this finding demonstrates, not only the potential strain for the cost-effective BNC production at high temperature, but also the superior ultrafine nanofibrils production useful for further applications.


Subject(s)
Acetobacteraceae/growth & development , Cellulose/biosynthesis , Nanofibers , Culture Media/chemistry , Culture Media/pharmacology
17.
Parasit Vectors ; 13(1): 42, 2020 Jan 29.
Article in English | MEDLINE | ID: mdl-31996254

ABSTRACT

BACKGROUND: According to scientific recommendations, paratransgenesis is one of the solutions for improving the effectiveness of the Global Malaria Eradication Programme. In paratransgenesis, symbiont microorganisms are used for distorting or blocking the parasite life-cycle, affecting the fitness and longevity of vectors or reducing the vectorial competence. It has been revealed recently that bacteria could be used as potent tools for double stranded RNA production and delivery to insects. Moreover, findings showed that RNase III mutant bacteria are more competent for this aim. Asaia spp. have been introduced as potent paratransgenesis candidates for combating malaria and, based on their specific features for this goal, could be considered as effective dsRNA production and delivery tools to Anopheles spp. Therefore, we decided to characterize the rnc gene and its related protein to provide the basic required information for creating an RNase III mutant Asaia bacterium. METHODS: Asaia bacteria were isolated from field-collected Anopheles stephensi mosquitoes. The rnc gene and its surrounding sequences were characterized by rapid amplification of genomic ends. RNase III recombinant protein was expressed in E. coli BL21 and biological activity of the purified recombinant protein was assayed. Furthermore, Asaia RNaseIII amino acid sequence was analyzed by in silico approaches such as homology modeling and docking to determine its structural properties. RESULTS: In this study, the structure of rnc gene and its related operon from Asaia sp. was determined. In addition, by performing superimposition and docking with specific substrate, the structural features of Asaia RNaseIII protein such as critical residues which are involved and essential for proper folding of active site, binding of magnesium ions and double stranded RNA molecule to protein and cleaving of dsRNA molecules, were determined. CONCLUSIONS: In this study, the basic and essential data for creating an RNase III mutant Asaia sp. strain, which is the first step of developing an efficient RNAi-based paratransgenesis tool, were acquired. Asaia sp. have been found in different medically-important vectors and these data are potentially very helpful for researchers studying paratransgenesis and vector-borne diseases and are interested in applying the RNAi technology in the field.


Subject(s)
Acetobacteraceae/enzymology , Anopheles/parasitology , Life Cycle Stages , Mosquito Vectors/parasitology , Plasmodium/physiology , Ribonuclease III/genetics , Acetobacteraceae/classification , Acetobacteraceae/genetics , Acetobacteraceae/growth & development , Amino Acid Sequence , Animals , Anopheles/physiology , Blotting, Western , Electrophoresis, Polyacrylamide Gel , Molecular Conformation , Molecular Docking Simulation , Mosquito Vectors/physiology , Operon/physiology , Phylogeny , Plasmodium/growth & development , Promoter Regions, Genetic , RNA Interference/physiology , RNA, Double-Stranded/metabolism , RNA, Ribosomal, 16S/genetics , Ribonuclease III/chemistry , Ribonuclease III/metabolism , Sequence Alignment , Symbiosis
18.
J Gen Appl Microbiol ; 55(2): 101-10, 2009 Apr.
Article in English | MEDLINE | ID: mdl-19436127

ABSTRACT

MxaF gene, a gene encoding alpha subunit of methanol dehydrogenase, was investigated for acetic acid bacteria, and growth on methanol was examined for the bacteria by using various media. Of 21 strains of acetic acid bacteria studied, Acidomonas methanolica strains showed the presence of mxaF gene exclusively, and grew on a defined medium containing methanol. Further, none of the strains tested of which the growth on methanol had been previously reported, except for Acidomonas methanolica, showed the presence of mxaF gene or the growth on methanol. Precautions were taken against false growth on compounds used for identification of bacteria.


Subject(s)
Acetobacteraceae/enzymology , Acetobacteraceae/genetics , Alcohol Oxidoreductases/genetics , Genes, Bacterial/genetics , Methanol/metabolism , Acetic Acid/metabolism , Acetobacteraceae/classification , Acetobacteraceae/growth & development , Alcohol Oxidoreductases/metabolism , Molecular Sequence Data , Sequence Homology, Nucleic Acid
19.
Microb Biotechnol ; 12(4): 677-687, 2019 07.
Article in English | MEDLINE | ID: mdl-30912251

ABSTRACT

Komagataeibacter xylinus ATCC 23770 was statically cultivated in eight culture media based on different carbon sources, viz. seven biomass-derived sugars and one sugar mixture. The productivity and quality of the bacterial nanocellulose (BNC) produced in the different media were compared. Highest volumetric productivity, yield on consumed sugar, viscometric degree of polymerization (DPv , 4350-4400) and thermal stability were achieved using media based on glucose or maltose. Growth in media based on xylose, mannose or galactose resulted in lower volumetric productivity and DPv , but in larger fibril diameter and higher crystallinity (76-78%). Growth in medium based on a synthetic sugar mixture resembling the composition of a lignocellulosic hydrolysate promoted BNC productivity and yield, but decreased fibril diameter, DPv , crystallinity and thermal stability. This work shows that volumetric productivity, yield and properties of BNC are highly affected by the carbon source, and indicates how industrially relevant sugar mixtures would affect these characteristics.


Subject(s)
Acetobacteraceae/metabolism , Carbohydrate Metabolism , Cellulose/metabolism , Culture Media/chemistry , Plant Extracts/metabolism , Acetobacteraceae/growth & development , Biomass , Nanostructures/analysis
20.
J Biomed Mater Res B Appl Biomater ; 107(4): 978-987, 2019 May.
Article in English | MEDLINE | ID: mdl-30261126

ABSTRACT

The article presents the method of preparation of new, stable bacterial cellulose composites with perforated solid materials for biomedical applications, comprising reconstructive surgery of soft and hard tissues. The composites were obtained in specially designed bioreactors equipped with a set of perforated mesh stripes threaded vertically to the culture medium, ensuring perpendicular growth of bacterial nanocellulose synthesized by Komagataeibacter xylinus E25 in stationary culture. The developed biocomposites have been tested for stability and mechanical strength, as well as for their in vitro inflammatory responses shown as mast cell degranulation with N-acetyl-ß-d-hexosaminidase release and mast cell adhesion. The obtained results indicate that the composites components are well integrated after the process of cultivation and purification. Bacterial nanocellulose does not negatively influence mechanical properties of the polypropylene porous mesh, preserving its tensile strength, elasticity, and load. Moreover, application of bacterial cellulose makes the composites less immunogenic as compared to polypropylene itself. Therefore, the composites have the great potential of application in medicine, and depending on the applied porous material, might be used either in hernioplasty (if porous hernia mesh is used), cranioplasty (if perforated metal or polymeric cranial implant is applied), or as a protective barrier in any application that requires biocompatibility or antiadhesive properties improvement. © 2018 Wiley Periodicals, Inc. J Biomed Mater Res Part B: Appl Biomater 107B: 978-987, 2019.


Subject(s)
Acetobacteraceae/chemistry , Cellulose/chemistry , Mast Cells/metabolism , Materials Testing , Nanocomposites/chemistry , Polypropylenes/chemistry , Surgical Mesh , Acetobacteraceae/growth & development , Animals , Cell Degranulation , Cell Line, Tumor , Herniorrhaphy , Mast Cells/cytology , Porosity , Rats
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