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1.
Prep Biochem Biotechnol ; 51(3): 289-299, 2021.
Article in English | MEDLINE | ID: mdl-32907464

ABSTRACT

ß-Galactosidase production, partial purification and characterization by a new fungal were investigated. Partial purification was performed by aqueous two-phase system (ATPS) using polyethylene glycol (PEG) molar mass, PEG concentration, citrate concentration and pH as the independent variables. Purification factor (PF), partition coefficient (K) and yield (Y) were the responses. After identification by rDNA sequencing and classification as Cladosporium tenuissimum URM 7803, this isolate achieved a maximum cell concentration and ß-galactosidase activity of 0.48 g/L and 462.1 U/mL, respectively. ß-Galactosidase partitioned preferentially for bottom salt-rich phase likely due to hydrophobicity and volume exclusion effect caused in the top phase by the high PEG concentration and molar mass. The highest value of PF (12.94) was obtained using 24% (w/w) PEG 8000 g/mol and 15% (w/w) citrate, while that of Y (79.76%) using 20% (w/w) PEG 400 g/mol and 25% (w/w) citrate, both at pH 6. The enzyme exhibited optimum temperature in crude and ATPS extracts in the ranges 35-50 °C and 40-55 °C, respectively, and optimum pH in the range 3.0-4.5, with a fall of enzyme activity under alkaline conditions. Some metal ions and detergents inhibited, while others stimulated enzyme activity. Finally, C. tenuissimum URM 7803 ß-galactosidase showed a profile suitable for prebiotics production.


Subject(s)
Cladosporium/enzymology , Polyethylene Glycols/chemistry , beta-Galactosidase/chemistry , Biotechnology , Citrates , DNA/analysis , Detergents/chemistry , Fermentation , Hydrogen-Ion Concentration , Hydrophobic and Hydrophilic Interactions , Ions , Iron/chemistry , Lactose/chemistry , Microscopy, Electron, Scanning , Phylogeny , Polymerase Chain Reaction , Prebiotics , Sequence Analysis, DNA , Temperature , Water/chemistry , beta-Galactosidase/isolation & purification
2.
Rev Argent Microbiol ; 52(1): 4-12, 2020.
Article in English | MEDLINE | ID: mdl-31204058

ABSTRACT

Currently, the valorization of agroindustrial waste is of great interest. Moringa oleifera is a multipurpose tree whose softwood residues could be used as raw material for low-cost cellulase production. The aim of this study was to isolate, identify, and characterize microorganisms with cellulolytic activity in different carbon sources. We isolated and purified 42 microorganisms from M. oleifera biomass. Fungi presenting the largest hydrolytic halos in carboxymethylcellulose as a substrate were molecularly identified as Penicillium funiculosum (FG1), Fusarium verticillioides (FG3) and Cladosporium cladosporioides (FC2). The ability of these fungal strains to break down cellulose was assessed in a submerged fermentation using either amorphous CMC or crystalline form (Avicel). P. funiculosum and C. cladosporioides displayed similar endoglucanase (606U/l) and exoglucanase (205U/l) activities in the Avicel-containing medium, whereas F. verticillioides showed the highest level of ß-glucosidase activity (664U/l) in the carboxymethylcellulose medium. In addition, the effect of three culture media (A, B, and C) on cellulase production was evaluated in P. funiculosum using moringa straw as a carbon source. The results showed a volumetric productivity improvement of cellulases that was 2.77-, 8.26-, and 2.30-fold higher for endoglucanase, exoglucanase and ß-glucosidase, respectively when medium C containing moringa straw was used as a carbon source. The enzymatic extracts produced by these fungi have biotechnological potential especially for second-generation bioethanol production (2G) from moringa straw. This is the first report on the use of M. oleifera biomass to induce the production of various cellulases in P. funiculosum.


Subject(s)
Cellulase/physiology , Cellulose/metabolism , Cladosporium/enzymology , Fusarium/enzymology , Moringa oleifera/enzymology , Talaromyces/enzymology
3.
Proc Natl Acad Sci U S A ; 113(25): 6851-6, 2016 06 21.
Article in English | MEDLINE | ID: mdl-27274078

ABSTRACT

Anthraquinones are a large family of secondary metabolites (SMs) that are extensively studied for their diverse biological activities. These activities are determined by functional group decorations and the formation of dimers from anthraquinone monomers. Despite their numerous medicinal qualities, very few anthraquinone biosynthetic pathways have been elucidated so far, including the enzymatic dimerization steps. In this study, we report the elucidation of the biosynthesis of cladofulvin, an asymmetrical homodimer of nataloe-emodin produced by the fungus Cladosporium fulvum A gene cluster of 10 genes controls cladofulvin biosynthesis, which begins with the production of atrochrysone carboxylic acid by the polyketide synthase ClaG and the ß-lactamase ClaF. This compound is decarboxylated by ClaH to yield emodin, which is then converted to chrysophanol hydroquinone by the reductase ClaC and the dehydratase ClaB. We show that the predicted cytochrome P450 ClaM catalyzes the dimerization of nataloe-emodin to cladofulvin. Remarkably, such dimerization dramatically increases nataloe-emodin cytotoxicity against mammalian cell lines. These findings shed light on the enzymatic mechanisms involved in anthraquinone dimerization. Future characterization of the ClaM enzyme should facilitate engineering the biosynthesis of novel, potent, dimeric anthraquinones and structurally related compound families.


Subject(s)
Anthraquinones/metabolism , Cytochrome P-450 Enzyme System/metabolism , Anthraquinones/chemistry , Cladosporium/enzymology , Cladosporium/metabolism , Dimerization
4.
Fungal Genet Biol ; 84: 52-61, 2015 Nov.
Article in English | MEDLINE | ID: mdl-26415644

ABSTRACT

Cladosporium fulvum is a non-obligate biotrophic fungal tomato pathogen for which fifteen secondary metabolite (SM) gene clusters were previously identified in its genome. However, most of these SM biosynthetic pathways remain cryptic during growth in planta and in different in vitro conditions. The sole SM produced in vitro is the pigment cladofulvin. In this study, we attempted to activate cryptic pathways in order to identify new compounds produced by C. fulvum. For this purpose, we manipulated orthologues of the global regulators VeA, LaeA and HdaA known to regulate SM biosynthesis in other fungal species. In C. fulvum, deleting or over-expressing these regulators yielded no new detectable SMs. Yet, quantification of cladofulvin revealed that CfHdaA is an activator whilst CfVeA and CfLaeA seemed to act as repressors of cladofulvin production. In the wild type strain, cladofulvin biosynthesis was affected by the carbon source, with highest production under carbon limitation and traces only in presence of saccharose. Repression of cladofulvin production by saccharose was dependent on both CfVeA and CfLaeA. Deletion of CfVeA or CfLaeA caused production of sterile mycelia, whilst Δcfhdaa deletion mutants sporulated, suggesting that cladofulvin production is not linked to asexual reproduction. Profiling the transcription of these regulators showed that CfHdaA-mediated regulation of cladofulvin production is independent of both CfVeA and CfLaeA. Our data suggest CfLaeA directly affects cladofulvin production whilst the effect of CfVeA is indirect, suggesting a role for CfLaeA outside of the Velvet complex. In conclusion, our results showed that regulation of SM production in C. fulvum is different from other fungi and indicate that manipulation of global regulators is not a universal tool to discover new fungal natural products.


Subject(s)
Cladosporium/metabolism , Solanum lycopersicum/microbiology , Agrobacterium tumefaciens/genetics , Catabolite Repression , Chromatography, High Pressure Liquid , Cladosporium/enzymology , Cladosporium/genetics , Fungal Proteins/genetics , Fungal Proteins/metabolism , Gene Expression Profiling , Genes, Fungal , Multigene Family , Phenotype , Real-Time Polymerase Chain Reaction , Secondary Metabolism , Sequence Deletion , Sucrose/metabolism
5.
Biosci Biotechnol Biochem ; 78(2): 245-54, 2014.
Article in English | MEDLINE | ID: mdl-25036677

ABSTRACT

Two distinct extracellular lipases were obtained from Penicillium solitum 194A, isolated from domestic compost, and Cladosporium cladosporioides 194B, isolated from dairy wastewater. These alkaline enzymes had molecular masses of 42 and 30 kDa, respectively. The P. solitum 194A lipase differed in mass from previously reported enzyme, indicating that it is a novel lipase, and indicating that penicillia can secrete lipase isoenzymes. The C. cladosporioides lipase was more active on esters of medium-chain acids, whereas the P. solitum lipase was more active on longer chained substrates. The C. cladosporioides enzyme displayed higher thermal stability than the P. solitum lipase, preserving full activity up to 48 °C and showing a T50 (10 min) of 60 °C. Their different catalytic properties and good protein stability should make these enzymes suitable for biotechnological applications. Furthermore, the combined use of these two fungal strains may prove to be valuable in lipid-rich waste management.


Subject(s)
Cladosporium/enzymology , Lipase/metabolism , Lipolysis , Penicillium/enzymology , Biocatalysis , Cladosporium/cytology , Cladosporium/isolation & purification , Dairying , Enzyme Stability , Extracellular Space/enzymology , Hydrogen-Ion Concentration , Lipase/chemistry , Lipase/isolation & purification , Metals/pharmacology , Penicillium/cytology , Penicillium/isolation & purification , Soil Microbiology , Temperature , Wastewater/microbiology
6.
Prep Biochem Biotechnol ; 44(5): 433-50, 2014.
Article in English | MEDLINE | ID: mdl-24397716

ABSTRACT

L-Asparaginase (ASNase), an antileukemia enzyme, is facing problems with antigenicity in the blood. Modification of L-asparaginase from Cladosporium sp. was tried to obtain improved stability and improved functionality. In our experiment, modification of the enzyme was tried with bovine serum albumin, ovalbumin by crosslinking using glutaraldehyde, N-bromosuccinimide, and mono-methoxy polyethylene glycol. Modified enzymes were studied for activity, temperature stability, rate constants (kd), and protection to proteolytic digestion. Modification with ovalbumin resulted in improved enzyme activity that was 10-fold higher compared to native enzyme, while modification with bovine serum albumin through glutaraldehyde cross-linking resulted in high stability of L-asparaginase that was 8.5- and 7.62-fold more compared to native enzyme at 28°C and 37°C by the end of 24 hr. These effects were dependent on the quantity of conjugate formed. Modification also markedly prolonged L-asparaginase half-life and serum stability. N-Bromosuccinimide-modified ASNase presented greater stability with prolonged in vitro half-life of 144 hr to proteolytic digestion relative to unmodified enzyme (93 h). The present work could be seen as producing a modified L-asparaginase with improved activity and stability and can be a potential source for developing therapeutic agents for cancer treatment.


Subject(s)
Antineoplastic Agents/chemistry , Asparaginase/chemistry , Cladosporium/enzymology , Animals , Antineoplastic Agents/metabolism , Asparaginase/metabolism , Bromosuccinimide/chemistry , Cattle , Cross-Linking Reagents/chemistry , Enzyme Stability , Glutaral/chemistry , Humans , Polyethylene Glycols/chemistry , Proteolysis , Serum/metabolism , Serum Albumin, Bovine/chemistry , Temperature
7.
New Phytol ; 198(4): 1203-1214, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23448507

ABSTRACT

· α-Tomatine is an antifungal glycoalkaloid that provides basal defense to tomato (Solanum lycopersicum). However, tomato pathogens overcome this basal defense barrier by the secretion of tomatinases that degrade α-tomatine into the less fungitoxic compounds ß-tomatine and tomatidine. Although pathogenic on tomato, it has been reported that the biotrophic fungus Cladosporium fulvum is unable to detoxify α-tomatine. · Here, we present a functional analysis of the glycosyl hydrolase (GH10), CfTom1, which is orthologous to fungal tomatinases. · We show that C. fulvum hydrolyzes α-tomatine into tomatidine in vitro and during the infection of tomato, which is fully attributed to the activity of CfTom1, as shown by the heterologous expression of this enzyme in tomato. Accordingly, ∆cftom1 mutants of C. fulvum are more sensitive to α-tomatine and are less virulent than the wild-type fungus on tomato. · Although α-tomatine is thought to be localized in the vacuole, we show that it is also present in the apoplast, where it is hydrolyzed by CfTom1 on infection. The accumulation of tomatidine during infection appears to be toxic to tomato cells and does not suppress defense responses, as suggested previously. Altogether, our results show that CfTom1 is responsible for the detoxification of α-tomatine by C. fulvum, and is required for full virulence of this fungus on tomato.


Subject(s)
Cladosporium/pathogenicity , Tomatine/analogs & derivatives , Cladosporium/enzymology , Cladosporium/genetics , Fungal Proteins/genetics , Fungal Proteins/metabolism , Gene Expression Profiling , Gene Expression Regulation, Fungal , Glycoside Hydrolases/metabolism , Solanum lycopersicum/microbiology , Mutation/genetics , Phylogeny , Plant Leaves/microbiology , Tomatine/chemistry , Tomatine/metabolism , Virulence
8.
World J Microbiol Biotechnol ; 29(4): 577-87, 2013 Apr.
Article in English | MEDLINE | ID: mdl-23180548

ABSTRACT

L-asparaginase from Cladosporium sp. grown on wheat bran by SSF was purified. Enzyme appeared to be a trimer with homodimer of 37 kDa and another 47 kDa amounting to total mass of 121 kDa as estimated by SDS-PAGE and 120 kDa on gel filtration column. The optimum temperature and pH of the enzyme were 30 °C and 6.3, respectively with Vmax of 4.44 µmol/mL/min and Km of 0.1 M. Substrate specificity studies indicated that, L-asparaginase has greater affinity towards L-asparagine with substrate hydrolysis efficiency (Vmax/Km ratio) eightfold higher than that of L-glutamine. L-asparaginase activity in presence of thiols studied showed decrease in Vmax and increase in Km, indicating nonessential mode of inactivation. Among the thiols tested, ß-mercaptomethanol, exerted inhibitory effect, suggesting a critical role of disulphide linkages in maintaining a suitable conformation of the enzyme. Metal ions such as Ca(2+), Co(2+), Cu(2+), Mg(2+), Na(+), K(+) and Zn(2+) significantly affected enzyme activity whereas presence of Fe(3+), Pb(2+) and KI stimulated the activity. Detergents studied also enhanced L-asparaginase activity. In-vitro half-life of purified L-asparaginase in mammalian blood serum was 93.69 h. The enzyme inhibited acrylamide formation in potato chips by 96 % making it a potential candidate for food industry to reduce acrylamide content in starchy fried food commodities.


Subject(s)
Asparaginase/isolation & purification , Asparaginase/metabolism , Cladosporium/enzymology , Asparaginase/chemistry , Asparagine/metabolism , Chromatography, Gel , Culture Media/chemistry , Electrophoresis, Polyacrylamide Gel , Enzyme Activators/metabolism , Enzyme Inhibitors/metabolism , Enzyme Stability , Glutamine/metabolism , Hydrogen-Ion Concentration , Kinetics , Molecular Weight , Protein Multimerization , Substrate Specificity , Temperature
9.
J Ind Microbiol Biotechnol ; 39(4): 521-7, 2012 Apr.
Article in English | MEDLINE | ID: mdl-22270887

ABSTRACT

Rb1 and Rg1 are the major ginsenosides in protopanaxadiol and protopanaxatriol. Their content in ginsenosides was 23.8 and 17.6%, respectively. A total of 22 isolates of ß-glucosidase producing microorganisms were isolated from the soil of a ginseng field using Esculin-R2A agar. Among these isolates, the strain GH21 showed the strongest activities to convert ginsenoside Rb1 and Rg1 to minor ginsenosides compound-K and F1, respectively. Ginsenosides Rb1 and Rg1 bioconversion rates were 74.2 and 89.3%, respectively. Meanwhile, the results demonstrated that the ginsenoside Rg1 could change the biotransformation pathway of ginsenoside Rb1 by inhibiting the formation of the intermediate metabolite gypenoside-XVII. GH21 was identified as a Cladosporium cladosporioides species based on the internal transcribed spacers (ITS) ITS1-5.8S-ITS2 rRNA gene sequences constructed phylogenetic trees.


Subject(s)
Cladosporium/isolation & purification , Cladosporium/metabolism , Ginsenosides/metabolism , Soil Microbiology , beta-Glucosidase/metabolism , Agar/metabolism , Biotransformation , Cladosporium/classification , Cladosporium/enzymology , Panax/chemistry , Panax/microbiology , Phylogeny
10.
Mycopathologia ; 174(5-6): 397-408, 2012 Dec.
Article in English | MEDLINE | ID: mdl-22714980

ABSTRACT

Cladosporium cladosporioides is a dematiaceous fungus with coloured mycelia and conidia due to the presence of dark pigments. The purpose of this study was to characterize the dark pigments synthetized by Cladosporium sp. LPSC no. 1088 and also to identify the putative polyketide synthase (pks) gene that might be involved in the pigment biosynthesis. Morphological as well as molecular features like the ITS sequence confirmed that LPSC 1088 is Cladosporium cladosporioides. UV-visible, Fourier Transform Infrared (FTIR) and Electron Spin Resonance (ESR) spectroscopy analysis as well as melanin inhibitors suggest that the main dark pigment of the isolate was 1,8 dihydroxynaphthalene (DHN)-melanin-type compound. Two commercial fungicides, Difenoconazole and Chlorothalonil, inhibited fungal growth as well as increased pigmentation of the colonies suggesting that melanin might protect the fungus against chemical stress. The pigment is most probably synthetized by means of a pentaketide pathway since the sequence of a 651 bp fragment, coding for a putative polyketide synthase, is highly homologous to pks sequences from other fungi.


Subject(s)
Cladosporium/enzymology , Fungal Proteins/metabolism , Melanins/biosynthesis , Polyketide Synthases/metabolism , Cladosporium/classification , Cladosporium/genetics , Cladosporium/isolation & purification , Electron Spin Resonance Spectroscopy , Fungal Proteins/genetics , Solanum lycopersicum/microbiology , Melanins/chemistry , Molecular Sequence Data , Naphthols/chemistry , Phylogeny , Polyketide Synthases/genetics
11.
Clin Exp Allergy ; 41(5): 739-49, 2011 May.
Article in English | MEDLINE | ID: mdl-21488999

ABSTRACT

BACKGROUND: Mould-induced atopic respiratory diseases are a worldwide problem. Characterization of fungal allergens is of major clinical importance. OBJECTIVE: We identified a novel transaldolase family allergen of Cladosporium and Penicillium species. METHODS: Fungal allergens were identified by immunoblotting, peptide mass mapping and partial sequencing, cDNA cloning and IgE epitope mapping. RESULTS: A 36.5 kDa IgE-binding component in a partially purified C. cladosporioides preparation was identified. Mass spectrometric analyses suggest that this novel IgE-reacting allergen is a transaldolase. A corresponding full-length 1246 bp cDNA encoding a polypeptide of 325 residues was isolated. The newly identified transaldolase allergen has been designated as Cla c 14.0101. The cDNA encoding the Pencillium chrysogenum transaldolase was isolated by RT-PCR according to the cDNA sequence encoding a P. chrysogenum Wisconsin 54-1255 hypothetical protein. The purified rCla c 14.0101 protein reacted with IgE antibodies in 10 (38%) of 26 Cladosporium cladosporioides-sensitized asthmatic patients. Nine of the 10 rCla c 14.0101-positive sera have IgE binding against the recombinant Penicillium transaldolase (rPen ch 35.0101). Among the eight fungal transaldolase-positive sera tested, three showed IgE binding against the recombinant human transaldolase. To determine cross-reactivity between the Cladosporium and Penicillium fungi, IgE cross-reactivity was detected between these two fungal transaldolase allergens by inhibition assays. Both the N- and the C-terminal fragments of Cla c 14.0101 were recognized by IgE antibodies. The C-terminal IgE-reacting determinant was narrowed down to a region encompassing Thr257 to Ser278 of Cla c 14.0101. It was mapped onto a loop-like structure of a 3D model constructed for Cla c 14.0101. CONCLUSION AND CLINICAL RELEVANCE: We identified transaldolase as a novel and IgE cross-reactive allergen family of C. cladosporioides and P. chrysogenum. In addition, an IgE-reacting fragment (Thr257 to Ser278) was pinpointed to a loop-like structure on Cla c 14.0101. Results obtained provide important information in clinical mould allergy.


Subject(s)
Allergens/immunology , Antigens, Fungal/immunology , Asthma/immunology , Cladosporium/immunology , Immunoglobulin E/immunology , Penicillium chrysogenum/immunology , Transaldolase/immunology , Allergens/blood , Antigens, Fungal/blood , Asthma/blood , Asthma/microbiology , Cladosporium/enzymology , Humans , Immunoglobulin E/blood , Penicillium chrysogenum/enzymology , Transaldolase/blood
12.
Food Chem ; 310: 125970, 2020 Apr 25.
Article in English | MEDLINE | ID: mdl-31838375

ABSTRACT

Glucose oxidases are widely used in various industrial processes, including bread baking. In this study, a novel glucose oxidase gene, CngoxA, from Cladosporium neopsychrotolerans SL16, was cloned and expressed in Pichia pastoris. Recombinant CnGOXA exhibited maximal activity at 20 °C and pH 7.0, and was stable at 30 °C and pH 6.0-9.0 for 1 h, with a half-life of 15 min at 40 °C. Compared with CnGOXA, the half-life of its mutant CnGOXA-M1 (Y169C-A211C), at 40 °C increased approximately 48-fold, and was stable at 30 °C and pH 3.0-12.0 for 1 h. The kcat and catalytic efficiency of CnGOXA-M1 were enhanced 0.7- and 1.6-fold, respectively. Both enzymes were cold-adapted and highly resistant to SDS. Furthermore, CnGOXA-M1 had a more significant effect on bread volume than that of GOX from Aspergillus niger. These favorable enzymatic properties of CnGOXA-M1 make it a potentially useful enzyme for many industrial applications.


Subject(s)
Bread , Cladosporium/enzymology , Glucose Oxidase/chemistry , Glucose Oxidase/metabolism , Aspergillus niger/enzymology , Catalysis , Cladosporium/genetics , Enzyme Stability , Food Microbiology , Fungal Proteins/chemistry , Fungal Proteins/genetics , Fungal Proteins/metabolism , Glucose Oxidase/genetics , Hydrogen-Ion Concentration , Kinetics , Mutation , Pichia/genetics , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Soil Microbiology , Temperature
13.
Microbiol Res ; 231: 126353, 2020 Jan.
Article in English | MEDLINE | ID: mdl-31707299

ABSTRACT

Cladosporium spp. is a cosmopolitan fungal genus. In the literature, it has been reported as a biological agent for controlling several plant diseases, but its mechanism of action has never been clarified. The present study aims to identify Cladosporium spp. based on the DNA phylogeny of nine isolates obtained from the phylloplane of rice and their potential antagonistic activity against the main fungal pathogens that affect rice crop. Nine isolates of Cladosporium spp. were identified based on DNA phylogeny, molecular and morphological characterization, and their antagonistic effects with the rice pathogens C. miyabeanus, M. oryzae, M. albescens and S. oryzae. Four isolates were selected to study lytic enzymes such as ß-1,3-glucanase, chitinase and protease, and only one isolate was selected for a conidial germination and appressoria formation assay. The nine isolates were identified as C. cladosporioides, C. tenuissimum and C. subuliforme. Four isolates, identified as C. cladosporioides, inhibited the mycelial growth of rice pathogens such as C1H (68.59%) of S. oryzae, C5 G (74.32%) of C. miyabeanus, C11 G (75.97%) of M. oryzae and C24 G (77.39%) of M. albescens. C24 G showed a high activity of lytic enzymes, was tested against C. miyabeanus and M. oryzae, and inhibited conidial germination and appressorium formation by more than 59.36%. The characterization of C. cladosporioides suggested this species as a potential bioagent for the management of several rice diseases, especially rice blast. This is the first time that a potential biological agent from the genus Cladosporium identified at the species level was isolated from the rice phylloplane, and some of its mechanisms of action were demonstrated, such as increasing lytic enzyme activity against rice pathogens.


Subject(s)
Cladosporium , Plant Leaves/microbiology , Plant Pathology , Antibiosis , Ascomycota/growth & development , Biological Control Agents , Chitinases/metabolism , Cladosporium/enzymology , Cladosporium/genetics , Cladosporium/isolation & purification , DNA, Ribosomal , Fungi, Unclassified/growth & development , Glycoside Hydrolases/metabolism , Magnaporthe/growth & development , Mycoses , Oryza/microbiology , Peptide Hydrolases/metabolism , Phylogeny , Plant Diseases
14.
Microb Ecol ; 58(3): 642-50, 2009 Oct.
Article in English | MEDLINE | ID: mdl-19452199

ABSTRACT

We investigated microbial interactions of aquatic bacteria associated with hyphae (the hyphosphere) of freshwater fungi on leaf litter. Bacteria were isolated directly from the hyphae of fungi from sedimented leaves of a small stream in the National Park "Lower Oder," Germany. To investigate interactions, bacteria and fungi were pairwise co-cultivated on leaf-extract medium and in microcosms loaded with leaves. The performance of fungi and bacteria was monitored by measuring growth, enzyme production, and respiration of mono- and co-cultures. Growth inhibition of the fungus Cladosporium herbarum by Ralstonia pickettii was detected on leaf extract agar plates. In microcosms, the presence of Chryseobacterium sp. lowered the exocellulase, endocellulase, and cellobiase activity of the fungus. Additionally, the conversion of leaf material into microbial biomass was retarded in co-cultures. The respiration of the fungus was uninfluenced by the presence of the bacterium.


Subject(s)
Cladosporium/growth & development , Plant Leaves/microbiology , Ralstonia pickettii/growth & development , Water Microbiology , Antibiosis , Biodegradation, Environmental , Carbon/analysis , Cellulases/metabolism , Chryseobacterium/growth & development , Chryseobacterium/isolation & purification , Chryseobacterium/metabolism , Cladosporium/enzymology , Cladosporium/isolation & purification , Coculture Techniques , Hyphae , Nitrogen/analysis , Ralstonia pickettii/isolation & purification , Rivers/microbiology , beta-Glucosidase/metabolism
15.
Mol Plant Pathol ; 20(12): 1710-1721, 2019 12.
Article in English | MEDLINE | ID: mdl-31603622

ABSTRACT

To facilitate infection, pathogens deploy a plethora of effectors to suppress basal host immunity induced by exogenous microbe-associated or endogenous damage-associated molecular patterns (DAMPs). In this study, we have characterized family 17 glycosyl hydrolases of the tomato pathogen Cladosporium fulvum (CfGH17) and studied their role in infection. Heterologous expression of CfGH17-1 to 5 by potato virus X in different tomato cultivars showed that CfGH17-1 and CfGH17-5 enzymes induce cell death in Cf-0, Cf-1 and Cf-5 but not in Cf-Ecp3 tomato cultivars or tobacco. Moreover, CfGH17-1 orthologues from other phytopathogens, including Dothistroma septosporum and Mycosphaerella fijiensis, also trigger cell death in tomato. CfGH17-1 and CfGH17-5 are predicted to be ß-1,3-glucanases and their enzymatic activity is required for the induction of cell death. CfGH17-1 hydrolyses laminarin, a linear 1,3-ß-glucan with 1,6-ß linkages. CfGH17-1 expression is down-regulated during the biotrophic phase of infection and up-regulated during the necrotrophic phase. Deletion of CfGH17-1 in C. fulvum did not reduce virulence on tomato, while constitutive expression of CfGH17-1 decreased virulence, suggesting that abundant presence of CfGH17-1 during biotrophic growth may release a DAMP that activates plant defence responses. Under natural conditions CfGH17-1 is suggested to play a role during saprophytic growth when the fungus thrives on dead host tissue, which is in line with its high levels of expression at late stages of infection when host tissues have become necrotic. We suggest that CfGH17-1 releases a DAMP from the host cell wall that is recognized by a yet unknown host plant receptor.


Subject(s)
Ascomycota/enzymology , Cladosporium/enzymology , N-Glycosyl Hydrolases/metabolism , Plant Diseases/microbiology , Solanum lycopersicum/microbiology , Ascomycota/pathogenicity , Cell Death , Cladosporium/pathogenicity , Plant Cells
16.
Int Arch Allergy Immunol ; 146(4): 277-86, 2008.
Article in English | MEDLINE | ID: mdl-18362473

ABSTRACT

BACKGROUND: Cladosporium is an important allergenic fungus worldwide. We report here a major allergen of C. cladosporioides. METHODS: Major C. cladosporioides allergens were characterized by immunoblotting, N-terminal amino acid sequencing, protein purification and cDNA cloning. RESULTS: Seventy-four sera (38%) from 197 bronchial asthmatic patients demonstrated IgE binding against C. cladosporioides extracts. Among these 74 sera, 41 (55%) and 38 (51%) showed IgE binding against a 36- and a 20-kDa protein of C. cladosporioides, respectively. Both IgE-reacting components reacted with FUM20, a monoclonal antibody against fungal serine proteases. N-terminal amino acid sequencing results suggest that they are vacuolar serine proteases, and the 20-kDa component is possibly a degraded product of the 36-kDa allergen. A corresponding 5'-truncated 1,425-bp cDNA fragment was isolated. The mature protein after N-terminal processing starts with an N-terminal serine that is the ninth residue encoded by the 5'-truncated cDNA. The protein sequence deduced shares 69-72% sequence identity with Penicillium vacuolar serine proteases and was designated as Cla c 9. The purified 36-kDa Cla c 9 allergen showed proteolytic activity with peptide Z-Ala-Ala-Leu-pNA as substrate. IgE cross-reactivity was detected between the purified Cla c 9 and serine protease allergens from Aspergillusfumigatus and Penicillium chrysogenum. CONCLUSION: We identified a vacuolar serine protease as a major allergen of C. cladosporioides (Cla c 9) and a major pan-allergen of prevalent airborne fungi. IgE cross-reactivity among these highly conserved serine protease pan-fungal allergens was also detectable.


Subject(s)
Allergens/immunology , Asthma/immunology , Cladosporium/enzymology , Cladosporium/immunology , Serine Endopeptidases/immunology , Adult , Allergens/chemistry , Allergens/genetics , Allergens/isolation & purification , Amino Acid Sequence , Asthma/blood , Asthma/microbiology , Base Sequence , Cladosporium/genetics , Cloning, Molecular , Cross Reactions , DNA, Complementary/genetics , Fungal Proteins/genetics , Fungal Proteins/immunology , Humans , Immunoblotting , Immunoglobulin E/immunology , Molecular Sequence Data , RNA, Fungal/chemistry , RNA, Fungal/genetics , Recombinant Proteins/immunology , Reverse Transcriptase Polymerase Chain Reaction , Sequence Alignment , Sequence Analysis, Protein , Serine Endopeptidases/chemistry , Serine Endopeptidases/genetics , Serine Endopeptidases/isolation & purification
17.
Fungal Biol ; 122(9): 875-882, 2018 09.
Article in English | MEDLINE | ID: mdl-30115321

ABSTRACT

Numerous endoxylanases from mesophilic fungi have been purified and characterized. However, endoxylanases from cold-adapted fungi, especially those from Antarctica, have been less studied. In this work, a cDNA from the Antarctic fungus Cladosporium sp. with similarity to endoxylanases from glycosyl hydrolase family 10, was cloned and expressed in Pichia pastoris. The pure recombinant enzyme (named XynA) showed optimal activity on xylan at 50 °C and pH 6-7. The enzyme releases xylooligosaccharides but not xylose, indicating that XynA is a classical endoxylanase. The enzyme was most active on xylans with high content of arabinose (rye arabinoylan and wheat arabinoxylan) than on xylans with low content of arabinose (oat spelts xylan, birchwood xylan and beechwood xylan). Finally, XynA showed a very low thermostability. After 20-30 min of incubation at 40 °C, the enzyme was completely inactivated, suggesting that XynA would be the most thermolabile endoxylanase described so far in filamentous fungi. This is one of the few reports describing the heterologous expression and characterization of a xylanase from a fungus isolated from Antarctica.


Subject(s)
Cladosporium/enzymology , Cladosporium/metabolism , Endo-1,4-beta Xylanases/analysis , Endo-1,4-beta Xylanases/isolation & purification , Glucuronates/metabolism , Oligosaccharides/metabolism , Antarctic Regions , Cloning, Molecular/methods , Enzyme Stability , Hydrogen-Ion Concentration , Pichia/genetics , Temperature
18.
Sci Rep ; 8(1): 6075, 2018 04 17.
Article in English | MEDLINE | ID: mdl-29666397

ABSTRACT

The occurrence of Cladosporium in cold ecosystems has been evidenced long before, and most of the knowledge about nutrient utilization of this genus is sporadic. An alpine soil isolate C. neopsychrotolerans SL-16, showing great cold tolerance and significant lignocellulose-degrading capability, was sequenced to form a 35.9 Mb genome that contains 13,456 predicted genes. Functional annotation on predicted genes revealed a wide array of proteins involved in the transport and metabolism of carbohydrate, protein and lipid. Large numbers of transmembrane proteins (967) and CAZymes (571) were identified, and those related to hemicellulose degradation was the most abundant. To undermine the hemicellulose (xyaln as the main component) utilization mechanism of SL-16, the mRNA levels of 23 xylanolytic enzymes were quantified, and representatives of three glycoside hydrolase families were functionally characterized. The enzymes showed similar neutral, cold active and thermolabile properties and synergistic action on xylan degradation (the synergy degree up to 15.32). Kinetic analysis and sequence and structure comparison with mesophilic and thermophilic homologues indicated that these cold-active enzymes employed different cold adaptation strategies to function well in cold environment. These similar and complementary advantages in cold adaptation and catalysis might explain the high efficiency of lignocellulose conversion observed in SL-16 under low temperatures.


Subject(s)
Cladosporium/metabolism , Fungal Proteins/metabolism , Polysaccharides/metabolism , Acclimatization , Cladosporium/enzymology , Cladosporium/genetics , Cold-Shock Response , Fungal Proteins/genetics , Gene Expression Regulation, Fungal , Genome, Fungal , Glycoside Hydrolases/genetics , Glycoside Hydrolases/metabolism , Hydrolysis , Kinetics , Polysaccharides/genetics , Thermodynamics , Xylans/genetics , Xylans/metabolism
19.
Biomed Res Int ; 2016: 4575024, 2016.
Article in English | MEDLINE | ID: mdl-27213150

ABSTRACT

A new fungus Cladosporium oxysporum GQ-3 producing extracellular xylanase was isolated from decaying agricultural waste and identified based on the morphology and comparison of internal transcribed spacer (ITS) rDNA gene sequence. C. oxysporum produced maximum xylanase activity of 55.92 U/mL with wheat bran as a substrate and NH4Cl as a nitrogen source. Mg(2+) improved C. oxysporum xylanase production. Partially purified xylanase exhibited maximum activity at 50°C and pH 8.0, respectively, and showed the stable activity after 2-h treatment in pH 7.0-8.5 or below 55°C. Mg(2+) enhanced the xylanase activity by 2% while Cu(2+) had the highest inhibition ratio of 57.9%. Furthermore, C. oxysporum xylanase was resistant to most of tested neutral and alkaline proteases. Our findings indicated that Cladosporium oxysporum GQ-3 was a novel xylanase producer, which could be used in the textile processes or paper/feed industries.


Subject(s)
Cladosporium/enzymology , Endo-1,4-beta Xylanases/chemistry , Endo-1,4-beta Xylanases/isolation & purification , Bacterial Proteins/chemistry , Endo-1,4-beta Xylanases/metabolism , Endopeptidases/chemistry , Enzyme Stability , Hydrogen-Ion Concentration , Temperature , Triticum/chemistry
20.
Biochim Biophys Acta ; 1429(2): 439-45, 1999 Jan 11.
Article in English | MEDLINE | ID: mdl-9989229

ABSTRACT

A new enzyme, N-alkylglycine oxidase, was isolated from a soil mold, Cladosporium sp. G-10. This protein, which was purified to near homogeneity by ammonium sulfate precipitation followed by successive column chromatography on phenyl-Sepharose, DEAE-Sepharose and Sephadex G-200, was a single polypeptide with a molecular mass of 52,000. In the presence of O2 and H2O, this enzyme acted on some N-alkylglycine derivatives, such as N epsilon-carboxymethyllysine, N-carboxymethyl-6-aminocaproic acid, sarcosine and N-ethylglycine, and produced corresponding N-alkylamine, glyoxylic acid and H2O2. This enzyme had optimum activity at 30 degrees C, pH 8-10, and was most inhibited by ZnSO4, pCMB, iodoacetic acid, and SDS.


Subject(s)
Amino Acid Oxidoreductases/isolation & purification , Cladosporium/enzymology , Amino Acid Oxidoreductases/chemistry , Amino Acid Oxidoreductases/metabolism , Hydrogen-Ion Concentration , Kinetics , Lysine/analogs & derivatives , Lysine/metabolism , Molecular Weight , Sarcosine/metabolism , Temperature
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