Your browser doesn't support javascript.
loading
Show: 20 | 50 | 100
Results 1 - 20 de 26
Filter
1.
Biomed Chromatogr ; 29(6): 918-24, 2015 Jun.
Article in English | MEDLINE | ID: mdl-25365958

ABSTRACT

Eflornithine (α-difluoromethylornithine) has been used to treat second-stage (or meningoencephalitic-stage) human African trypanosomiasis and currently is under clinical development for cancer prevention. In this study, a new ultraperformance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS)-based assay was developed and validated for the quantification of eflornithine in rat brain. To improve chromatographic retention and MS detection, eflornithine was derivatized with 6-aminoquinolyl-N-hydroxysuccinimidyl carbamate for 5 min at room temperature prior to injection. Derivatized eflornithine was separated on a reverse-phase C18 UPLC column with a 6-min gradient; elution occurred at approximately 1.5 min. Prior to derivatization, eflornithine was reproducibly extracted from rat brain homogenate by methanol protein precipitation (~70% recovery). Derivatized eflornithine was stable in the autosampler (6 °C) for at least 24 h. This new assay had acceptable intra- and interday accuracy and precision over a wide dynamic range (5000-fold) and excellent sensitivity with a lower limit of quantification of 0.1 µm (18 ng/mL) using only 10 µL of rat brain homogenate. The validated eflornithine assay was applied successfully to determine eflornithine distribution in different regions of rat brain in an in situ rat brain perfusion study.


Subject(s)
Brain/metabolism , Chromatography, High Pressure Liquid/methods , Eflornithine/analysis , Tandem Mass Spectrometry/methods , Trypanocidal Agents/analysis , Animals , Brain Chemistry , Eflornithine/chemistry , Eflornithine/pharmacokinetics , Linear Models , Male , Rats , Rats, Sprague-Dawley , Reproducibility of Results , Sensitivity and Specificity , Trypanocidal Agents/chemistry , Trypanocidal Agents/pharmacokinetics
2.
Pak J Pharm Sci ; 28(2): 623-9, 2015 Mar.
Article in English | MEDLINE | ID: mdl-25730793

ABSTRACT

Four newer, cost effective and sensitive ion-pair complex methods were estimated for the determination of eflornithine hydrochloride drug in pharmaceutical formulation. In these methods eflornithine hydrochloride react with bromocresol green (buffer of pH 4), bromophenol blue (buffer pH 4.5), methyl orange (buffer of pH 5.5) and bromothymol blue (buffer of pH 5) respectively. The chloroform was used for extraction of ion-pair complexes. The measurement of complexes was done at 413, 416, 417 and 425 nm respectively. Under the described conditions the proposed methods are linear over the concentration range of 3-18, 4-16, 6-30 and 2-12 µg/ml and the coefficient of determination were >0.999 (n=6) with a relative standard deviation of <1% (n=6). The average recovery of the target compound is >100% with a limit of quantification (LOQ) of 20, 0.869, 2 and 4.167 µg/ml and the limit of detection (LOD) 6.6, 0.287, 0.66 and 1.375 µg/ml. The mechanism of the derivatization reaction is proposed and advantages of the proposed method are discussed.


Subject(s)
Eflornithine/analysis , Spectrophotometry/methods , Drug Stability , Eflornithine/chemistry , Hydrogen-Ion Concentration , Indicators and Reagents , Limit of Detection
3.
Amino Acids ; 38(2): 525-31, 2010 Feb.
Article in English | MEDLINE | ID: mdl-19960215

ABSTRACT

Recent studies have shown that aldosterone may play a critical role in the transition to heart failure and that heart is a direct target of the action of aldosterone, which can provoke hypertrophy and apoptosis of isolated cardiomyocytes and also increase the expression of genes that favor tissue fibrosis. Early work from this and other laboratories has established a link between the aliphatic polyamines and cardiac hypertrophy, while more recently an involvement of polyamines even in cell death and survival has emerged. In the present study we have treated cardiac cells, i.e. rat H9c2 cardiomyoblasts and neonatal cardiomyocytes, with (D, L)-2-(difluoromethyl)ornithine, a specific inhibitor of polyamine biosynthesis, to investigate the effects of polyamines in relation to the hypertrophic, pro-fibrotic and pro-apoptotic actions of aldosterone. The results indicate that inhibition of polyamine biosynthesis may prevent or attenuate the adverse actions of aldosterone, by modulating the expression of genes related to cardiac hypertrophy and fibrosis, as well as the levels of proteins and the activities of enzymes that control apoptosis.


Subject(s)
Aldosterone/pharmacology , Eflornithine/pharmacology , Heart Diseases/pathology , Myocytes, Cardiac/drug effects , Animals , Apoptosis/drug effects , Biogenic Polyamines/biosynthesis , Cells, Cultured , Eflornithine/chemistry , Fibrosis/metabolism , Gene Expression/drug effects , Heart Diseases/drug therapy , Heart Diseases/metabolism , Heart Diseases/physiopathology , Hypertrophy/metabolism , Myocytes, Cardiac/cytology , Myocytes, Cardiac/metabolism , Myocytes, Cardiac/pathology , Rats , Rats, Wistar
4.
Biomed Chromatogr ; 24(7): 768-73, 2010 Jul.
Article in English | MEDLINE | ID: mdl-20020417

ABSTRACT

A bioanalytical method for indirect determination of eflornithine enantiomers in 75 microL human plasma has been developed and validated. L- and D-eflornithine were derivatized with o-phthalaldehyde and N-acetyl-L-cysteine to generate diastereomers which were separated on two serially connected Chromolith Performance columns (RP-18e 100 x 4.6 mm i.d.) by a isocratic flow followed by a gradient flow for elution of endogenous compounds. The diastereomers were detected with UV (340 nm). The between-day precisions for L- and D-eflornithine in plasma were 8.4 and 2.3% at 3 microm, 4.0 and 5.1% at 400 microm, and 2.0 and 3.7% at 1000 microm. The lower limit of quantification was determined to be 1.5 microm, at which precision was 14.9 and 9.9% for L- and D-eflornithine, respectively.


Subject(s)
Chromatography, High Pressure Liquid/methods , Eflornithine/blood , Chromatography, High Pressure Liquid/instrumentation , Cysteine/chemistry , Eflornithine/chemistry , Stereoisomerism , o-Phthalaldehyde/chemistry
5.
Biomolecules ; 10(9)2020 09 21.
Article in English | MEDLINE | ID: mdl-32967116

ABSTRACT

We report the results of our in silico study of approved drugs as potential treatments for COVID-19. The study is based on the analysis of normal modes of proteins. The drugs studied include chloroquine, ivermectin, remdesivir, sofosbuvir, boceprevir, and α-difluoromethylornithine (DMFO). We applied the tools we developed and standard tools used in the structural biology community. Our results indicate that small molecules selectively bind to stable, kinetically active residues and residues adjoining them on the surface of proteins and inside protein pockets, and that some prefer hydrophobic sites over other active sites. Our approach is not restricted to viruses and can facilitate rational drug design, as well as improve our understanding of molecular interactions, in general.


Subject(s)
Antiviral Agents/pharmacology , Coronavirus Infections/drug therapy , Pandemics , Pneumonia, Viral/drug therapy , Adenosine Monophosphate/analogs & derivatives , Adenosine Monophosphate/chemistry , Adenosine Monophosphate/pharmacology , Alanine/analogs & derivatives , Alanine/chemistry , Alanine/pharmacology , Angiotensin-Converting Enzyme 2 , Antibodies, Viral/immunology , Antigen-Antibody Reactions , Antiviral Agents/chemistry , Antiviral Agents/therapeutic use , Betacoronavirus , Binding Sites , COVID-19 , Chloroquine/chemistry , Chloroquine/pharmacology , Coronavirus Infections/prevention & control , Drug Repositioning , Eflornithine/chemistry , Eflornithine/pharmacology , Humans , Hydrophobic and Hydrophilic Interactions , Ivermectin/chemistry , Ivermectin/pharmacology , L-Lactate Dehydrogenase/chemistry , L-Lactate Dehydrogenase/drug effects , Models, Molecular , Molecular Docking Simulation , Pandemics/prevention & control , Peptidyl-Dipeptidase A/chemistry , Peptidyl-Dipeptidase A/drug effects , Pneumonia, Viral/prevention & control , Proline/analogs & derivatives , Proline/chemistry , Proline/pharmacology , Protein Binding , Protein Conformation , Protein Interaction Mapping , Receptors, Glycine/chemistry , Receptors, Glycine/drug effects , SARS-CoV-2 , Saposins/chemistry , Saposins/drug effects , Sofosbuvir/chemistry , Sofosbuvir/pharmacology , Spike Glycoprotein, Coronavirus/chemistry , Spike Glycoprotein, Coronavirus/drug effects , Structure-Activity Relationship , COVID-19 Drug Treatment
6.
Bioorg Med Chem ; 17(6): 2512-23, 2009 Mar 15.
Article in English | MEDLINE | ID: mdl-19250832

ABSTRACT

There is an urgent need for the development of new drugs for the treatment of human African trypanosomiasis. The causative organism, Trypanosoma brucei, has been shown to have some unusual plasma membrane transporters, in particular the P2 aminopurine transporter and related permeases, which have been used for the selective targeting of trypanocidal compounds to the organism. In this paper, we report the addition of melamine-based P2-targeting motifs to three different classes of compound in order to try and improve activity through increased selective uptake. The classes reported here are fluoroquinolones, difluoromethylornithine and artesunate derivatives.


Subject(s)
Triazines/chemistry , Trypanocidal Agents/pharmacology , Trypanosoma brucei brucei/drug effects , Animals , Eflornithine/chemistry , Magnetic Resonance Spectroscopy , Spectrometry, Mass, Electrospray Ionization , Trypanocidal Agents/chemistry
7.
J Biomol Struct Dyn ; 37(3): 766-780, 2019 Feb.
Article in English | MEDLINE | ID: mdl-29436980

ABSTRACT

Ornithine decarboxylase (ODC) is an enzyme that initiates polyamine synthesis in human. Polyamines play key roles in cell-cell adhesion, cell motility and cell cycle regulation. Higher synthesis of polyamines also occurs in rapidly proliferating cancer cells are mediated by ODC. As per earlier studies, di-flouro-methyl-orninthine (DFMO) is a proven efficient inhibitor ODC targeting the catalytic activity, however, its usage is limited due to side effects. Targeting ODC is considered as a potential therapeutic modality in the treatment of cancer. In this study, it is attempted to use DFMO scaffold to build a ligand-based pharmocophore query using MOE to screen similar active compounds from Universal Natural Products Database with better ADMET properties. The identified compounds were virtually screened against the active cavity of ODC using Glide. Further, potential natural hits targeting ODC were shortlisted based on Molecular Mechanics/Generalized-Born/Surface Area (MM-GBSA) score. Finally, molecular dynamics simulations were performed for the natural molecule hit and DFMO in complex with ODC using Desmond. Among the hits shortlisted, 2-amino-5, 9, 13, 17-tetramethyloctadeca-8, 16-diene-1, 3, 14-triol (UNPD208110) was found to be highly potential, as it showed a higher binding affinity in terms of interactions with key active cavity residues, and also showed better ADMET property, HUMO-LUMO gap energy and more stable complex formation with ODC compared to DFMO. Hence, the proposed molecule (UNPD208110) shall be favourably considered as a potential natural inhibitor targeting ODC-mediated disease conditions.


Subject(s)
Drug Evaluation, Preclinical , Eflornithine/chemistry , Molecular Dynamics Simulation , Ornithine Decarboxylase Inhibitors/analysis , User-Computer Interface , Caco-2 Cells , Humans , Hydrogen Bonding , Ligands , Molecular Docking Simulation , Ornithine Decarboxylase/chemistry , Ornithine Decarboxylase Inhibitors/chemistry , Reproducibility of Results
8.
Antimicrob Agents Chemother ; 52(8): 2842-8, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18519728

ABSTRACT

This study aimed to investigate if the absorption of the human African trypanosomiasis agent eflornithine was stereospecific and dose dependent after oral administration. Male Sprague-Dawley rats were administered single doses of racemic eflornithine hydrochloride as an oral solution (750, 1,500, 2,000, or 3,000 mg/kg of body weight) or intravenously (375 or 1,000 mg/kg of body weight). Sparse blood samples were obtained for determination of eflornithine enantiomers by liquid chromatography with evaporative light-scattering detection (lower limit of quantification [LLOQ], 83 microM for 300 microl plasma). The full plasma concentration-time profile of racemic eflornithine following frequent sampling was determined for another group of rats, using a high-performance liquid chromatography-UV method (LLOQ, 5 microM for 50 microl plasma). Pharmacokinetic data were analyzed in NONMEM for the combined racemic and enantiomeric concentrations. Upon intravenous administration, the plasma concentration-time profile of eflornithine was biphasic, with marginal differences in enantiomer kinetics (mean clearances of 14.5 and 12.6 ml/min/kg for L- and D-eflornithine, respectively). The complex absorption kinetics were modeled with a number of transit compartments to account for delayed absorption, transferring the drug into an absorption compartment from which the rate of influx was saturable. The mean bioavailabilities for L- and D-eflornithine were 41% and 62%, respectively, in the dose range of 750 to 2,000 mg/kg of body weight, with suggested increases to 47% and 83%, respectively, after a dose of 3,000 mg/kg of body weight. Eflornithine exhibited enantioselective absorption, with the more potent L-isomer being less favored, a finding which may help to explain why clinical attempts to develop an oral treatment have hitherto failed. The mechanistic explanation for the stereoselective absorption remains unclear.


Subject(s)
Eflornithine/pharmacokinetics , Intestinal Absorption , Trypanocidal Agents/pharmacokinetics , Administration, Oral , Animals , Chromatography, High Pressure Liquid , Eflornithine/blood , Eflornithine/chemistry , Injections, Intravenous , Male , Rats , Rats, Sprague-Dawley , Stereoisomerism , Trypanocidal Agents/administration & dosage
9.
Drug Deliv ; 23(5): 1495-501, 2016 Jun.
Article in English | MEDLINE | ID: mdl-25182303

ABSTRACT

CONTEXT: Facial hirsutism is a cosmetic concern for women and can lead to significant anxiety and lack of self-esteem. Eflornithine cream is indicated for the treatment of facial hirsutism. However, limited success rate and overall patient's satisfaction, even with a long-term and high-frequency application, leave room for improvement. OBJECTIVE: The objective of this study is to test the effect of microneedle treatment on the in vitro skin permeation and the in vivo efficacy of eflornithine cream in a mouse model. MATERIALS AND METHOD: In vitro permeation study of eflornithine was performed using Franz diffusion cell. In vivo efficacy study was performed in a mouse model by monitoring the re-growth of hair in the lower dorsal skin of mice after the eflornithine cream was applied onto an area pretreated with microneedles. The skin and the hair follicles in the treated area were also examined histologically. RESULTS AND DISCUSSION: The hair growth inhibitory activity of eflornithine was significantly enhanced when the eflornithine cream was applied onto a mouse skin area pretreated with microneedles, most likely because the micropores created by microneedles allowed the permeation of eflornithine into the skin, as confirmed in an in vitro permeation study. Immunohistochemistry data revealed that cell proliferation in the skin and hair follicles was also significantly inhibited when the eflornithine cream was applied onto a skin area pretreated with microneedles. CONCLUSION: The integration of microneedle treatment into topical eflornithine therapy represents a potentially viable approach to increase eflornithine's ability to inhibit hair growth.


Subject(s)
Administration, Topical , Eflornithine/metabolism , Eflornithine/pharmacology , Hair Follicle/drug effects , Hirsutism/drug therapy , Skin/drug effects , Administration, Cutaneous , Animals , Eflornithine/chemistry , Face , Female , Hair Follicle/physiology , Humans , Mice , Skin/chemistry
10.
Oncotarget ; 6(1): 196-206, 2015 Jan 01.
Article in English | MEDLINE | ID: mdl-25415050

ABSTRACT

LIN28 has emerged as an oncogenic driver in a number of cancers, including neuroblastoma (NB). Overexpression of LIN28 correlates with poor outcome in NB, therefore drugs that impact the LIN28/Let-7 pathway could be beneficial in treating NB patients. The LIN28/Let-7 pathway affects many cellular processes including the regulation of cancer stem cells and glycolytic metabolism. Polyamines, regulated by ornithine decarboxylase (ODC) modulate eIF-5A which is a direct regulator of the LIN28/Let-7 axis. We propose that therapy inhibiting ODC will restore balance to the LIN28/Let-7 axis, suppress glycolytic metabolism, and decrease MYCN protein expression in NB. Difluoromethylornithine (DFMO) is an inhibitor of ODC in clinical trials for children with NB. In vitro experiments using NB cell lines, BE(2)-C, SMS-KCNR, and CHLA90 show that DFMO treatment reduced LIN28B and MYCN protein levels and increased Let-7 miRNA and decreased neurosphere formation. Glycolytic metabolic activity decreased with DFMO treatment in vivo. Additionally, sensitivity to DFMO treatment correlated with LIN28B overexpression (BE(2)-C>SMS-KCNR>CHLA90). This is the first study to demonstrate that DFMO treatment restores balance to the LIN28/Let-7 axis and inhibits glycolytic metabolism and neurosphere formation in NB and that PET scans may be a meaningful imaging tool to evaluate the therapeutic effects of DFMO treatment.


Subject(s)
Brain Neoplasms/genetics , MicroRNAs/genetics , Neuroblastoma/genetics , Ornithine Decarboxylase Inhibitors/chemistry , Ornithine Decarboxylase/chemistry , RNA-Binding Proteins/genetics , Adenosine Triphosphate/chemistry , Animals , Antineoplastic Agents/chemistry , Brain Neoplasms/metabolism , Cell Line, Tumor , Disease Progression , Dose-Response Relationship, Drug , Eflornithine/chemistry , Female , Gene Expression Regulation, Neoplastic , Glycolysis , Humans , Mice , Mice, Nude , MicroRNAs/metabolism , Neuroblastoma/metabolism , Oligonucleotide Array Sequence Analysis , Polyamines/chemistry , Positron-Emission Tomography , RNA-Binding Proteins/metabolism
11.
Am J Clin Dermatol ; 2(3): 197-201; discussion 202, 2001.
Article in English | MEDLINE | ID: mdl-11705097

ABSTRACT

Eflornithine is a specific, irreversible inhibitor of the enzyme ornithine decarboxylase which is thought to slow hair growth by inhibiting this enzyme in hair follicles. Percutaneous absorption of eflornithine in women with unwanted facial hair (hirsutism) was < 1% when the 15% cream was applied twice daily to a shaved 50 cm2 area of skin under the chin. In clinical studies in women with excessive, unwanted facial hair, eflornithine 15% cream was superior to placebo in reducing hair growth, as demonstrated by objective and subjective methods, after 2 to 8 weeks' treatment. After 24 weeks' treatment, 58% of eflornithine and 34% of placebo recipients had at least some improvement in facial hirsutism (for the purposes of this analysis all patients not assessed at week 24 were considered to be worse or to have no improvement). In addition, 32 versus 8% of patients were judged to be successfully treated (at least marked improvement). Hair growth returned to pretreatment rates within 8 weeks of stopping treatment. Use of a self-assessment questionnaire to assess the effect of study treatment on 6 aspects of patient well-being showed that eflornithine reduced the mean level of overall discomfort and bother by 33 versus 15% in placebo recipients. Adverse events mostly affected the skin. Only burning/stinging/tingling was markedly more common with eflornithine than with placebo.


Subject(s)
Eflornithine/therapeutic use , Face , Hirsutism/drug therapy , Ornithine Decarboxylase Inhibitors , Administration, Cutaneous , Chemistry, Pharmaceutical , Eflornithine/chemistry , Eflornithine/pharmacology , Female , Hair Follicle/drug effects , Hair Follicle/enzymology , Hair Follicle/physiology , Humans , Safety , Skin Absorption/drug effects , Treatment Outcome
12.
J Chromatogr A ; 762(1-2): 293-8, 1997 Feb 21.
Article in English | MEDLINE | ID: mdl-9098988

ABSTRACT

An analytical method has been developed based on cation-exchange liquid chromatography for the measurement of 2-difluoromethyl-DT-ornithine (DFMO) in human plasma, cerebrospinal fluid (CSF) and urine. Fluorescence detection at excitation/emission wavelengths of 340/440 nm is followed by postcolumn derivatization with o-phthalaldehyde-2,mercaptoethanol. All calibration ranges yielded linear relationships with correlation coefficients better than 0.999. In each case the limit of quantitation was equal to the lowest value of the standard curve. The variability of the assay, expressed as relative standard deviations, was less than 7.1%, 15.3% and 7.1% for plasma, CSF and urine, respectively. The accuracy of the assay (expressed as relative errors) ranged between 4.3% and 2.0% for plasma analysis, between -0.1% and 14.0% for CSF analysis and between -8.0% and 2.0% for urine analysis. Plasma, CSF and urinary DFMO concentrations were measured in samples obtained from patients undergoing treatment for trypanosomiasis. The method was found to be applicable for the measurement of DFMO levels in human body fluids for the determination of pharmacokinetic parameters in clinical studies.


Subject(s)
Chromatography, High Pressure Liquid/methods , Eflornithine/analysis , Enzyme Inhibitors/analysis , Circadian Rhythm , Eflornithine/chemistry , Enzyme Inhibitors/chemistry , Fluorescent Dyes/chemistry , Humans , Linear Models , Mercaptoethanol/analogs & derivatives , Mercaptoethanol/chemistry , Reproducibility of Results , Spectrometry, Fluorescence , o-Phthalaldehyde/analogs & derivatives , o-Phthalaldehyde/chemistry
13.
J Pharm Sci ; 86(9): 997-1000, 1997 Sep.
Article in English | MEDLINE | ID: mdl-9294811

ABSTRACT

Difluoromethylomithine (DFMO)-peptide conjugates were synthesized as prodrugs to improve the cytotoxic efficacy of DFMO. All conjugates inhibited cell growth in different cell lines more effectively than DFMO itself. The best cytotoxic effect was achieved in all cell lines by DFMO-Glu-His-Phe-Arg-Trp-Gly-OMe, where the carrier peptide is a melanotropin hormone fragment. Although this conjugate is capable of displacing labeled melanotropin from its receptor, its cytotoxic effect on the receptor-positive human melanoma cell line has not been proven to be receptor-mediated. The differences in the cytotoxicities of the congeners seem to be influenced, at least in part, by the nature of the carrier molecule.


Subject(s)
Antineoplastic Agents/chemistry , Antineoplastic Agents/toxicity , Eflornithine/analogs & derivatives , Eflornithine/toxicity , Eflornithine/chemistry , Humans , Hydrolysis , Melanocyte-Stimulating Hormones/metabolism , Melanoma, Experimental/metabolism , Peptides/chemistry , Peptides/toxicity , Receptors, Pituitary Hormone/biosynthesis , Receptors, Pituitary Hormone/metabolism , Thymidine/metabolism , Tumor Cells, Cultured
14.
J Proteomics ; 102: 44-59, 2014 May 06.
Article in English | MEDLINE | ID: mdl-24631822

ABSTRACT

Visceral leishmaniasis (VL) caused by Leishmania donovani is a systemic protozoan disease that is fatal if left untreated. The promastigote form of L. donovani is sensitive to growth inhibition by dl-α-difluoromethylornithine (DFMO), an inhibitor of ornithine decarboxylase (ODC), the first enzyme of the polyamine biosynthetic pathway. Exposure of a wild type (DI700) cell population to gradually increasing concentrations of DFMO resulted in the selection of a strain of Leishmania (DFMO-16), which was capable of proliferating in 16mM DFMO. To elucidate the molecular basis for this resistance, we undertook a comparative proteomic analysis of DFMO-resistant/sensitive parasites using isobaric tagging for relative and absolute quantification (iTRAQ/LC-MS/MS). Out of the 101 proteins identified in at least 2 of the 3 independent experiments, 82 proteins are 1.5- to 44.0-fold more abundant in DFMO-resistant strain (DFMO-16) while 19 are 2- to 5.0-fold less abundant as compared to the wild-type (DI700) parasites. Proteins with 2-fold or greater abundance in the DFMO-resistant strain include free radical detoxification, polyamine and trypanothione metabolic proteins, proteins involved in metabolism, intracellular survival and proteolysis, elongation factors, signaling molecules and mitochondrial transporters, and many with no annotated function. Differentially modulated proteins contribute to our understanding of molecular mechanism of DFMO-resistance and have the potential to act as biomarkers. BIOLOGICAL SIGNIFICANCE: This study will facilitate a deeper understanding of the phenomenon of acquired drug resistance and possible biomarkers in Leishmania against antiparasitic drug DFMO. Also it will provide information about the metabolic pathways modulated in resistant parasites as an adaptation mechanism to counter drugs. Studies like this are important to safeguard the efficacy of a limited repertoire of anti-parasitic drugs, and to lead the development of new drugs and drug combinations.


Subject(s)
Drug Resistance , Eflornithine/chemistry , Leishmania donovani/metabolism , Proteomics/methods , Biomarkers/chemistry , Chromatography, Liquid , Free Radicals , GTP Phosphohydrolases/chemistry , Glutathione/analogs & derivatives , Glutathione/chemistry , Mass Spectrometry , Ornithine Decarboxylase/chemistry , Peptides/chemistry , Polyamines/chemistry , Protein Folding , Signal Transduction , Spermidine/analogs & derivatives , Spermidine/chemistry , Subcellular Fractions/chemistry
15.
PLoS One ; 8(1): e53397, 2013.
Article in English | MEDLINE | ID: mdl-23326423

ABSTRACT

BACKGROUND: Polyamine biosynthetic pathway is a validated therapeutic target for large number of infectious diseases including cancer, giardiasis and African sleeping sickness, etc. α-Difluoromethylornithine (DFMO), a potent drug used for the treatment of African sleeping sickness is an irreversible inhibitor of ornithine decarboxylase (ODC), the first rate limiting enzyme of polyamine biosynthesis. The enzyme ODC of E. histolytica (EhODC) has been reported to exhibit resistance towards DFMO. METHODOLOGY/PRINCIPAL FINDING: The basis for insensitivity towards DFMO was investigated by structural analysis of EhODC and conformational modifications at the active site. Here, we report cloning, purification and crystal structure determination of C-terminal truncated Entamoeba histolytica ornithine decarboxylase (EhODCΔ15). Structure was determined by molecular replacement method and refined to 2.8 Å resolution. The orthorhombic crystal exhibits P2(1)2(1)2(1) symmetry with unit cell parameters a = 76.66, b = 119.28, c = 179.28 Å. Functional as well as evolutionary relations of EhODC with other ODC homologs were predicted on the basis of sequence analysis, phylogeny and structure. CONCLUSIONS/SIGNIFICANCE: We determined the tetrameric crystal structure of EhODCΔ15, which exists as a dimer in solution. Insensitivity towards DFMO is due to substitution of key substrate binding residues in active site pocket. Additionally, a few more substitutions similar to antizyme inhibitor (AZI), a non-functional homologue of ODCs, were identified in the active site. Here, we establish the fact that EhODC sequence has conserved PLP binding residues; in contrast few substrate binding residues are mutated similar to AZI. Further sequence analysis and structural studies revealed that EhODC may represent as an evolutionary bridge between active decarboxylase and inactive AZI.


Subject(s)
Adaptation, Physiological , Biological Evolution , Eflornithine/pharmacology , Entamoeba histolytica/enzymology , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Ornithine Decarboxylase Inhibitors , Amino Acid Sequence , Catalytic Domain , Chromatography, Gel , Crystallography, X-Ray , Eflornithine/chemistry , Models, Molecular , Molecular Sequence Data , Ornithine Decarboxylase/chemistry , Ornithine Decarboxylase/isolation & purification , Phylogeny , Protein Structure, Quaternary , Protein Structure, Secondary , Protein Subunits/chemistry , Proteins/antagonists & inhibitors , Proteins/metabolism , Sequence Alignment , Sequence Homology, Amino Acid , Structural Homology, Protein , Structure-Activity Relationship
16.
PLoS One ; 8(1): e53734, 2013.
Article in English | MEDLINE | ID: mdl-23372667

ABSTRACT

We present the first computational kinetic model of polyamine metabolism in bloodstream-form Trypanosoma brucei, the causative agent of human African trypanosomiasis. We systematically extracted the polyamine pathway from the complete metabolic network while still maintaining the predictive capability of the pathway. The kinetic model is constructed on the basis of information gleaned from the experimental biology literature and defined as a set of ordinary differential equations. We applied Michaelis-Menten kinetics featuring regulatory factors to describe enzymatic activities that are well defined. Uncharacterised enzyme kinetics were approximated and justified with available physiological properties of the system. Optimisation-based dynamic simulations were performed to train the model with experimental data and inconsistent predictions prompted an iterative procedure of model refinement. Good agreement between simulation results and measured data reported in various experimental conditions shows that the model has good applicability in spite of there being gaps in the required data. With this kinetic model, the relative importance of the individual pathway enzymes was assessed. We observed that, at low-to-moderate levels of inhibition, enzymes catalysing reactions of de novo AdoMet (MAT) and ornithine production (OrnPt) have more efficient inhibitory effect on total trypanothione content in comparison to other enzymes in the pathway. In our model, prozyme and TSHSyn (the production catalyst of total trypanothione) were also found to exhibit potent control on total trypanothione content but only when they were strongly inhibited. Different chemotherapeutic strategies against T. brucei were investigated using this model and interruption of polyamine synthesis via joint inhibition of MAT or OrnPt together with other polyamine enzymes was identified as an optimal therapeutic strategy.


Subject(s)
Eflornithine/pharmacology , Models, Chemical , Polyamines/metabolism , Trypanocidal Agents/pharmacology , Trypanosoma brucei brucei/metabolism , Adenosylmethionine Decarboxylase/antagonists & inhibitors , Adenosylmethionine Decarboxylase/metabolism , Animals , Computer Simulation , Eflornithine/chemistry , Humans , Kinetics , Metabolic Networks and Pathways/drug effects , Ornithine/metabolism , Ornithine Decarboxylase/metabolism , Ornithine Decarboxylase Inhibitors , Polyamines/antagonists & inhibitors , S-Adenosylmethionine/metabolism , Trypanocidal Agents/chemistry , Trypanosoma brucei brucei/drug effects , Trypanosomiasis, African/drug therapy , Trypanosomiasis, African/parasitology
17.
J Med Chem ; 54(15): 5432-43, 2011 Aug 11.
Article in English | MEDLINE | ID: mdl-21728378

ABSTRACT

Arginase is a binuclear manganese metalloenzyme that hydrolyzes L-arginine to form L-ornithine and urea, and aberrant arginase activity is implicated in various diseases such as erectile dysfunction, asthma, atherosclerosis, and cerebral malaria. Accordingly, arginase inhibitors may be therapeutically useful. Continuing our efforts to expand the chemical space of arginase inhibitor design and inspired by the binding of 2-(difluoromethyl)-L-ornithine to human arginase I, we now report the first study of the binding of α,α-disubstituted amino acids to arginase. Specifically, we report the design, synthesis, and assay of racemic 2-amino-6-borono-2-methylhexanoic acid and racemic 2-amino-6-borono-2-(difluoromethyl)hexanoic acid. X-ray crystal structures of human arginase I and Plasmodium falciparum arginase complexed with these inhibitors reveal the exclusive binding of the L-stereoisomer; the additional α-substituent of each inhibitor is readily accommodated and makes new intermolecular interactions in the outer active site of each enzyme. Therefore, this work highlights a new region of the protein surface that can be targeted for additional affinity interactions, as well as the first comparative structural insights on inhibitor discrimination between a human and a parasitic arginase.


Subject(s)
Amino Acids/chemistry , Arginase/antagonists & inhibitors , Boronic Acids/metabolism , Enzyme Inhibitors/chemistry , Amino Acids/chemical synthesis , Amino Acids/metabolism , Amino Acids/pharmacology , Arginase/chemistry , Boronic Acids/chemical synthesis , Boronic Acids/chemistry , Boronic Acids/pharmacology , Eflornithine/chemistry , Humans , Models, Molecular , Plasmodium falciparum/enzymology , Stereoisomerism
18.
Future Med Chem ; 3(10): 1307-15, 2011 Aug.
Article in English | MEDLINE | ID: mdl-21859304

ABSTRACT

Infectious diseases are an enormous burden to global health and ,since drug discovery is costly, those infectious diseases that affect the developing world are often not pursued by commercial drug-discovery efforts. Therefore, pragmatic means by which new therapeutics can be discovered are needed. One such approach is target repurposing, where pathogen targets are matched with homologous human targets that have been pursued for drug discovery for other indications. In many cases, the medicinal chemistry, structural biology and biochemistry knowledge around these human targets can be directly repurposed to launch and accelerate new drug-discovery efforts against the pathogen targets. This article describes the overarching strategy of target repurposing as a tool for initiating and prosecuting neglected disease drug-discovery programs, highlighting this approach with three case studies.


Subject(s)
Neglected Diseases/drug therapy , Acyltransferases/antagonists & inhibitors , Acyltransferases/metabolism , Drug Discovery , Eflornithine/chemistry , Eflornithine/pharmacology , Eflornithine/therapeutic use , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Enzyme Inhibitors/therapeutic use , HIV/enzymology , HIV Protease/chemistry , HIV Protease/metabolism , HIV Protease Inhibitors/chemistry , HIV Protease Inhibitors/pharmacology , HIV Protease Inhibitors/therapeutic use , Humans , Neglected Diseases/economics , Ornithine Decarboxylase/metabolism , Ornithine Decarboxylase Inhibitors , Trypanosoma brucei brucei/enzymology
19.
J Biol Chem ; 282(48): 34700-6, 2007 Nov 30.
Article in English | MEDLINE | ID: mdl-17901051

ABSTRACT

We have earlier shown that alpha-methylated spermidine and spermine analogues rescue cells from polyamine depletion-induced growth inhibition and maintain pancreatic integrity under severe polyamine deprivation. However, because alpha-methylspermidine can serve as a precursor of hypusine, an integral part of functional eukaryotic translation initiation factor 5A required for cell proliferation, and because alpha, omega-bismethylspermine can be converted to methylspermidine, it is not entirely clear whether the restoration of cell growth is actually attributable to hypusine formed from these polyamine analogues. Here, we have used optically active isomers of methylated spermidine and spermine and show that polyamine depletion-induced acute cytostasis in cultured cells could be reversed by all the isomers of the methylpolyamines irrespective of whether they served or not as precursors of hypusine. In transgenic rats with activated polyamine catabolism, all the isomers similarly restored liver regeneration and reduced plasma alpha-amylase activity associated with induced pancreatitis. Under the above experimental conditions, the (S, S)- but not the (R, R)-isomer of bismethylspermine was converted to methylspermidine apparently through the action of spermine oxidase strongly preferring the (S, S)-isomer. Of the analogues, however, only (S)-methylspermidine sustained cell growth during prolonged (more than 1 week) inhibition of polyamine biosynthesis. It was also the only isomer efficiently converted to hypusine, indicating that deoxyhypusine synthase likewise possesses hidden stereospecificity. Taken together, the results show that growth inhibition in response to polyamine depletion involves two phases, an acute and a late hypusine-dependent phase.


Subject(s)
Lysine/analogs & derivatives , Peptide Initiation Factors/genetics , Peptide Initiation Factors/physiology , Polyamines/metabolism , RNA-Binding Proteins/genetics , RNA-Binding Proteins/physiology , Animals , Animals, Genetically Modified , Cell Proliferation , Eflornithine/chemistry , Humans , Kinetics , Lysine/chemistry , Models, Biological , Pancreatitis/metabolism , Polyamines/chemistry , Rats , Recombinant Proteins/chemistry , Spermidine/analogs & derivatives , Spermidine/chemistry , Stereoisomerism , alpha-Amylases/metabolism , Eukaryotic Translation Initiation Factor 5A
20.
Breast Cancer Res Treat ; 105(1): 29-36, 2007 Sep.
Article in English | MEDLINE | ID: mdl-17143592

ABSTRACT

Increased polyamine synthesis has been associated with proliferation and progression of breast cancer, and thus, is a potential target for anti-cancer therapy. Polyamine depletion by DFMO has been shown to decrease pulmonary and bone metastasis from human breast cancer cell xenografts. Following these observations, this study was designed to test the effects of DFMO on in vitro and in vivo features of the highly invasive and metastatic 4T1 murine mammary cancer cells. DFMO inhibited proliferation, caused G1-S arrest, and suppressed in vitro invasiveness of 4T1 cells. In contrast to our previous findings with MDA-MB-435 cells, DFMO did not affect the activation of STAT3, JNK, and ERK, but decreased phosphorylation of p38. DFMO did not alter the expression of Twist. DFMO delayed the orthotopic growth of 4T1 xenografts in association with suppressed putrescine and spermidine levels but increased levels of spermine. DFMO did not affect pulmonary metastasis when primary tumors of control and DFMO-treated mice were matched for size. Interestingly, DFMO reduced Ki-67 expression only in the primary tumors but did not affect its expression in the metastatic tumors in the lung. Cleaved caspase-3 expression was not affected by DFMO in either the primary tumors or pulmonary metastasis. In summary, DFMO treatment markedly inhibited in vitro proliferation and invasiveness of 4T1 cells and retarded the growth of orthotopic xenografts in mice. The failure of DFMO to inhibit pulmonary metastasis in this system appears to be due, at least in part, to its lack of anti-proliferative effect at the metastatic sites.


Subject(s)
Eflornithine/chemistry , Polyamines/metabolism , Animals , Antineoplastic Agents/pharmacology , Apoptosis , Cell Line, Tumor , Collagen/chemistry , Drug Combinations , Ki-67 Antigen/biosynthesis , Laminin/chemistry , Mice , Mice, Inbred BALB C , Neoplasm Metastasis , Neoplasm Transplantation , Proteoglycans/chemistry , Putrescine/chemistry , Spermidine/chemistry , Spermine/chemistry
SELECTION OF CITATIONS
SEARCH DETAIL