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1.
Proc Natl Acad Sci U S A ; 117(18): 9884-9895, 2020 05 05.
Article in English | MEDLINE | ID: mdl-32321832

ABSTRACT

The factors and mechanisms involved in vacuolar transport in plants, and in particular those directing vesicles to their target endomembrane compartment, remain largely unknown. To identify components of the vacuolar trafficking machinery, we searched for Arabidopsis modified transport to the vacuole (mtv) mutants that abnormally secrete the synthetic vacuolar cargo VAC2. We report here on the identification of 17 mtv mutations, corresponding to mutant alleles of MTV2/VSR4, MTV3/PTEN2A MTV7/EREL1, MTV8/ARFC1, MTV9/PUF2, MTV10/VPS3, MTV11/VPS15, MTV12/GRV2, MTV14/GFS10, MTV15/BET11, MTV16/VPS51, MTV17/VPS54, and MTV18/VSR1 Eight of the MTV proteins localize at the interface between the trans-Golgi network (TGN) and the multivesicular bodies (MVBs), supporting that the trafficking step between these compartments is essential for segregating vacuolar proteins from those destined for secretion. Importantly, the GARP tethering complex subunits MTV16/VPS51 and MTV17/VPS54 were found at endoplasmic reticulum (ER)- and microtubule-associated compartments (EMACs). Moreover, MTV16/VPS51 interacts with the motor domain of kinesins, suggesting that, in addition to tethering vesicles, the GARP complex may regulate the motors that transport them. Our findings unveil a previously uncharacterized compartment of the plant vacuolar trafficking pathway and support a role for microtubules and kinesins in GARP-dependent transport of soluble vacuolar cargo in plants.


Subject(s)
Arabidopsis Proteins/metabolism , Protein Transport/genetics , Vacuoles/metabolism , Vesicular Transport Proteins/genetics , Alleles , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/genetics , Cytoplasmic Vesicles/genetics , Cytoplasmic Vesicles/metabolism , Endoplasmic Reticulum/genetics , Endoplasmic Reticulum/metabolism , Golgi Apparatus/genetics , Golgi Apparatus/metabolism , Kinesins/genetics , Kinesins/metabolism , Microtubules/genetics , Microtubules/metabolism , Multivesicular Bodies/genetics , Multivesicular Bodies/metabolism , Mutation , Vacuoles/genetics , Vesicular Transport Proteins/metabolism
2.
Proc Natl Acad Sci U S A ; 116(14): 6858-6867, 2019 04 02.
Article in English | MEDLINE | ID: mdl-30894482

ABSTRACT

The formation of multivesicular endosomes (MVEs) mediates the turnover of numerous integral membrane proteins and has been implicated in the down-regulation of growth factor signaling, thereby exhibiting properties of a tumor suppressor. The endosomal sorting complex required for transport (ESCRT) machinery plays a key role in MVE biogenesis, enabling cargo selection and intralumenal vesicle (ILV) budding. However, the spatiotemporal pattern of endogenous ESCRT complex assembly and disassembly in mammalian cells remains poorly defined. By combining CRISPR/Cas9-mediated genome editing and live cell imaging using lattice light sheet microscopy (LLSM), we determined the native dynamics of both early- and late-acting ESCRT components at MVEs under multiple growth conditions. Specifically, our data indicate that ESCRT-0 accumulates quickly on endosomes, typically in less than 30 seconds, and its levels oscillate in a manner dependent on the downstream recruitment of ESCRT-I. Similarly, levels of the ESCRT-I complex also fluctuate on endosomes, but its average residency time is more than fivefold shorter compared with ESCRT-0. Vps4 accumulation is the most transient, however, suggesting that the completion of ILV formation occurs rapidly. Upon addition of epidermal growth factor (EGF), both ESCRT-I and Vps4 are retained at endosomes for dramatically extended periods of time, while ESCRT-0 dynamics are only modestly affected. Our findings are consistent with a model in which growth factor stimulation stabilizes late-acting components of the ESCRT machinery at endosomes to accelerate the rate of ILV biogenesis and attenuate signal transduction initiated by receptor activation.


Subject(s)
Endosomal Sorting Complexes Required for Transport/genetics , Intercellular Signaling Peptides and Proteins/metabolism , Multivesicular Bodies/metabolism , CRISPR-Cas Systems , Cell Line, Transformed , Endosomal Sorting Complexes Required for Transport/metabolism , Gene Editing , Humans , Intercellular Signaling Peptides and Proteins/genetics , Multivesicular Bodies/genetics , Protein Transport/physiology
3.
Cell Mol Life Sci ; 76(24): 4829-4848, 2019 Dec.
Article in English | MEDLINE | ID: mdl-31363817

ABSTRACT

Exosomes, a type of small extracellular vesicles (sEVs), are secreted membrane vesicles that are derived from various cell types, including cancer cells, mesenchymal stem cells, and immune cells via multivesicular bodies (MVBs). These sEVs contain RNAs (mRNA, miRNA, lncRNA, and rRNA), lipids, DNA, proteins, and metabolites, all of which mediate cell-to-cell communication. This communication is known to be implicated in a diverse set of diseases such as cancers and their metastases and degenerative diseases. The molecular mechanisms, by which proteins are modified and sorted to sEVs, are not fully understood. Various cellular processes, including degradation, transcription, DNA repair, cell cycle, signal transduction, and autophagy, are known to be associated with ubiquitin and ubiquitin-like proteins (UBLs). Recent studies have revealed that ubiquitin and UBLs also regulate MVBs and protein sorting to sEVs. Ubiquitin-like 3 (UBL3)/membrane-anchored Ub-fold protein (MUB) acts as a post-translational modification (PTM) factor to regulate efficient protein sorting to sEVs. In this review, we focus on the mechanism of PTM by ubiquitin and UBLs and the pathway of protein sorting into sEVs and discuss the potential biological significance of these processes.


Subject(s)
Protein Processing, Post-Translational/genetics , Proteins/genetics , Ubiquitin/genetics , Ubiquitins/genetics , Autophagy/genetics , Exosomes/genetics , Extracellular Vesicles/genetics , Humans , Mesenchymal Stem Cells/metabolism , Multivesicular Bodies/genetics , Multivesicular Bodies/metabolism , Proteins/metabolism , Signal Transduction
4.
PLoS Genet ; 12(9): e1006311, 2016 09.
Article in English | MEDLINE | ID: mdl-27618555

ABSTRACT

Previous studies have shown that multivesicular bodies (MVBs)/endosomes-mediated vesicular trafficking may play key roles in plant immunity and cell death. However, the molecular regulation is poorly understood in rice. Here we report the identification and characterization of a MVBs-localized AAA ATPase LRD6-6 in rice. Disruption of LRD6-6 leads to enhanced immunity and cell death in rice. The ATPase activity and homo-dimerization of LRD6-6 is essential for its regulation on plant immunity and cell death. An ATPase inactive mutation (LRD6-6E315Q) leads to dominant-negative inhibition in plants. The LRD6-6 protein co-localizes with the MVBs marker protein RabF1/ARA6 and interacts with ESCRT-III components OsSNF7 and OsVPS2. Further analysis reveals that LRD6-6 is required for MVBs-mediated vesicular trafficking and inhibits the biosynthesis of antimicrobial compounds. Collectively, our study shows that the AAA ATPase LRD6-6 inhibits plant immunity and cell death most likely through modulating MVBs-mediated vesicular trafficking in rice.


Subject(s)
Adenosine Triphosphatases/biosynthesis , Immunity, Cellular/genetics , Multivesicular Bodies/genetics , Plant Proteins/genetics , Plants, Genetically Modified/genetics , Adenosine Triphosphatases/genetics , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Cell Death/genetics , Disease Resistance/genetics , Disease Resistance/immunology , Endosomal Sorting Complexes Required for Transport/genetics , Endosomal Sorting Complexes Required for Transport/metabolism , Endosomes/genetics , Endosomes/metabolism , Gene Expression Regulation, Plant , Multivesicular Bodies/immunology , Mutation , Oryza/genetics , Oryza/growth & development , Plant Diseases/genetics , Plant Diseases/immunology , Plant Leaves/genetics , Plant Leaves/immunology , Plants, Genetically Modified/immunology , Protein Transport/genetics , rab GTP-Binding Proteins/genetics
5.
Prog Mol Subcell Biol ; 57: 107-135, 2018.
Article in English | MEDLINE | ID: mdl-30097773

ABSTRACT

The ubiquitin-dependent degradation of membrane proteins via the multivesicular body (MVB) pathway requires the Endosomal Sorting Complexes Required for Transport (ESCRT). This molecular machinery is composed of five distinct multi-subunit complexes. On the surface of endosomes, ESCRT-0, -I and -II bind to ubiquitinated membrane proteins, while ESCRT-III and Vps4 bud intraluminal vesicles (ILVs) into the lumen of the endosomes. By working together, ESCRTs package membrane proteins into ILVs and thereby generate MVBs. The fusion of mature MVBs with lysosomes delivers ILVs into the lysosomal lumen where the membrane proteins are degraded. Besides generating ILVs, the ESCRT machinery mediates for topologically related membrane budding processes at the plasma membrane and the nuclear envelop. In this chapter, we briefly discuss membrane protein ubiquitination, endocytosis, and summarize current knowledge on the ESCRT machinery in the MVB pathway.


Subject(s)
Endocytosis/genetics , Endosomal Sorting Complexes Required for Transport/genetics , Endosomes/genetics , Ubiquitination/genetics , ATPases Associated with Diverse Cellular Activities/genetics , Humans , Lysosomes/genetics , Lysosomes/metabolism , Membrane Proteins/genetics , Multivesicular Bodies/genetics , Multivesicular Bodies/metabolism , Protein Transport/genetics , Vacuolar Proton-Translocating ATPases/genetics
6.
Mod Pathol ; 29(8): 928-38, 2016 08.
Article in English | MEDLINE | ID: mdl-27150162

ABSTRACT

Exosomes are small membrane vesicles that have important roles in transporting a great variety of bioactive molecules between epithelial compartment and their microenvironment during tumor formation including colorectal adenoma-carcinoma sequence. We tested the mRNA expression of the top 25 exosome-related markers based on ExoCharta database in healthy (n=49), adenoma (n=49) and colorectal carcinoma (n=49) patients using Affymetrix HGU133 Plus2.0 microarrays. Most related genes showed significantly elevated expression including PGK1, PKM, ANXA5, ENO1, HSP90AB1 and MSN during adenoma-carcinoma sequence. Surprisingly, the expression of ALIX (ALG 2-interacting protein X), involved in multivesicular body (MVB) and exosome formation, was significantly reduced in normal vs adenoma (P=5.02 × 10(-13)) and in normal vs colorectal carcinoma comparisons (P=1.51 × 10(-10)). ALIX also showed significant reduction (P<0.05) at the in situ protein level in the epithelial compartment of adenoma (n=35) and colorectal carcinoma (n=37) patients compared with 27 healthy individuals. Furthermore, significantly reduced ALIX protein levels were accompanied by their gradual transition from diffuse cytoplasmic expression to granular signals, which fell into the 0.6-2 µm diameter size range of MVBs. These ALIX-positive particles were seen in the tumor nests, including tumor-stroma border, which suggest their exosome function. MVB-like structures were also detected in tumor microenvironment including α-smooth muscle actin-positive stromal cells, budding off cancer cells in the tumor front as well as in cancer cells entrapped within lymphoid vessels. In conclusion, we determined the top aberrantly expressed exosome-associated markers and revealed the transition of diffuse ALIX protein signals into a MVB-like pattern during adenoma-carcinoma sequence. These tumor-associated particles seen both in the carcinoma and the surrounding microenvironment can potentially mediate epithelial-stromal interactions involved in the regulation of tumor growth, metastatic invasion and therapy response.


Subject(s)
Adenoma/chemistry , Biomarkers, Tumor/analysis , Calcium-Binding Proteins/analysis , Carcinoma/chemistry , Cell Cycle Proteins/analysis , Colorectal Neoplasms/chemistry , Endosomal Sorting Complexes Required for Transport/analysis , Exosomes/chemistry , Multivesicular Bodies/chemistry , Adenoma/genetics , Adenoma/pathology , Aged , Aged, 80 and over , Biomarkers, Tumor/genetics , Calcium-Binding Proteins/genetics , Carcinoma/genetics , Carcinoma/pathology , Case-Control Studies , Cell Cycle Proteins/genetics , Colorectal Neoplasms/genetics , Colorectal Neoplasms/pathology , Endosomal Sorting Complexes Required for Transport/genetics , Exosomes/genetics , Exosomes/pathology , Female , Gene Expression Profiling/methods , Humans , Immunohistochemistry , Male , Middle Aged , Multivesicular Bodies/genetics , Multivesicular Bodies/pathology , Oligonucleotide Array Sequence Analysis , Tumor Microenvironment
7.
J Cell Sci ; 126(Pt 22): 5143-52, 2013 Nov 15.
Article in English | MEDLINE | ID: mdl-24006264

ABSTRACT

Multivesicular endosomes/bodies (MVBs) deliver proteins, such as activated EGF receptor (EGFR), to the lysosome for degradation, and, in pigmented cells, MVBs containing PMEL are an initial stage in melanosome biogenesis. The mechanisms regulating numbers and fate of different populations of MVB are unclear. Here, we focus on the role of the G-protein-coupled receptor OA1 (also known as GPR143), which is expressed exclusively in pigmented cells and mutations in which cause the most common type of ocular albinism. When exogenously expressing PMEL, HeLa cells have been shown to form MVBs resembling early stage melanosomes. To focus on the role of OA1 in the initial stages of melanosome biogenesis we take advantage of the absence of the later stages of melanosome maturation in HeLa cells to determine whether OA1 activity can regulate MVB number and fate. Expression of wild-type but not OA1 mutants carrying inactivating mutations or deletions causes MVB numbers to increase. Whereas OA1 expression has no effect on delivery of EGFR-containing MVBs to the lysosome, it inhibits the lysosomal delivery of PMEL and PMEL-containing MVBs accumulate. We propose that OA1 activity delays delivery of PMEL-containing MVBs to the lysosome to allow time for melanin synthesis and commitment to melanosome biogenesis.


Subject(s)
Eye Proteins/biosynthesis , Lysosomes/metabolism , Melanosomes/metabolism , Membrane Glycoproteins/biosynthesis , Multivesicular Bodies/metabolism , Endosomes/metabolism , ErbB Receptors/genetics , ErbB Receptors/metabolism , Eye Proteins/genetics , Gene Expression Regulation, Developmental , HeLa Cells , Humans , Lysosomes/genetics , Melanosomes/genetics , Membrane Glycoproteins/genetics , Multivesicular Bodies/genetics , Mutation , gp100 Melanoma Antigen/metabolism
8.
Traffic ; 13(1): 9-18, 2012 Jan.
Article in English | MEDLINE | ID: mdl-21752167

ABSTRACT

It is becoming clear that intracellular signaling events are intimately linked with the membrane transport processes. In addition to the long known role of endocytosis in downregulating plasma membrane receptors, more recent data uncover several sophisticated modes by which endocytosis affects the type and duration of signals. Particularly striking are various roles of endocytic compartments as membrane platforms for compartmentalized assembly or sequestration of specific signaling complexes. Here we review some recent examples illustrating how endosomes may mediate ligand-stimulated apoptotic signaling and how multivesicular bodies affect Wnt signaling by regulated sequestration of signaling molecules or their secretion in exosomes. We also discuss evidence documenting the involvement of endocytic proteins in the regulation of p53 activity and stability, which suggests a possible cross-talk between endocytic processes and transcriptional responses.


Subject(s)
Endocytosis/physiology , Signal Transduction/physiology , Animals , Exosomes/genetics , Exosomes/metabolism , Exosomes/physiology , Humans , Membrane Proteins/genetics , Membrane Proteins/metabolism , Models, Biological , Multivesicular Bodies/genetics , Multivesicular Bodies/metabolism , Multivesicular Bodies/physiology , Protein Stability , Protein Transport , Tumor Suppressor Protein p53/genetics , Tumor Suppressor Protein p53/metabolism , Wnt Proteins/genetics , Wnt Proteins/metabolism
9.
J Huazhong Univ Sci Technolog Med Sci ; 34(5): 640-645, 2014 Oct.
Article in English | MEDLINE | ID: mdl-25318871

ABSTRACT

Microvesicles (MVs) are the heterogeneous mixtures of vesicles. MVs released by leukemia cells constitute an important part of the leukemia microenvironment. MVs might act as important reservoirs of microRNAs (miRNAs). It is worth evaluating whether MVs possess some unique miRNA contents that are valuable in understanding the pathogenesis. In this study, we investigated the miRNA expression patterns of Nalm-6-derived MVs, Jurkat-derived MVs and normal cell-derived MVs using miRNA microarrays. The potential target genes regulated by differentially expressed miRNAs were also predicted and analyzed. Results demonstrated that 182 miRNAs and 166 miRNAs were differentially expressed in Nalm-6-MVs and Jurkat-MVs, respectively. Many oncogenes, tumor suppressors and signal pathway genes were targeted by these aberrantly expressed miRNAs, which might contribute to the development of B-ALL or T-ALL. Our findings expanded the potential diagnostic markers of ALL and provided useful information for ALL pathogenesis.


Subject(s)
Gene Expression Profiling , Gene Expression Regulation, Leukemic , MicroRNAs/genetics , Multivesicular Bodies/genetics , Humans , Jurkat Cells , Oligonucleotide Array Sequence Analysis , Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/genetics , Precursor B-Cell Lymphoblastic Leukemia-Lymphoma/pathology , Precursor T-Cell Lymphoblastic Leukemia-Lymphoma/genetics , Precursor T-Cell Lymphoblastic Leukemia-Lymphoma/pathology , Reverse Transcriptase Polymerase Chain Reaction
10.
Traffic ; 12(2): 170-84, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21106040

ABSTRACT

The δ-opioid receptor (DOR) undergoes ligand-induced downregulation by endosomal sorting complex required for transport (ESCRT)-dependent endocytic trafficking to lysosomes. In contrast to a number of other signaling receptors, the DOR can downregulate effectively when its ubiquitination is prevented. We explored the membrane trafficking basis of this behavior. First, we show that internalized DORs traverse the canonical multivesicular body (MVB) pathway and localize to intralumenal vesicles (ILVs). Second, we show that DOR ubiquitination stimulates, but is not essential for, receptor transfer to ILVs and proteolysis of the receptor endodomain. Third, we show that receptor ubiquitination plays no detectable role in the early sorting of internalized DORs out of the recycling pathway. Finally, we show that DORs undergo extensive proteolytic fragmentation in the ectodomain, even when receptor ubiquitination is prevented or ILV formation itself is blocked. Together, these results are sufficient to explain why DORs downregulate effectively in the absence of ubiquitination, and they place a discrete molecular sorting operation in the MVB pathway effectively upstream of the ESCRT. More generally, these findings support the hypothesis that mammalian cells can control the cytoplasmic accessibility of internalized signaling receptors independently from their ultimate trafficking fate.


Subject(s)
Endosomal Sorting Complexes Required for Transport/metabolism , Lysosomes/metabolism , Multivesicular Bodies/metabolism , Receptors, Opioid, delta/metabolism , Ubiquitin/metabolism , Ubiquitination/physiology , Cell Line, Transformed , Cells, Cultured , Down-Regulation , Endocytosis/genetics , Endocytosis/physiology , HEK293 Cells , Humans , Lysosomes/genetics , Multivesicular Bodies/genetics , Protein Transport , Receptors, Opioid, delta/genetics
11.
J Biol Chem ; 287(52): 43899-908, 2012 Dec 21.
Article in English | MEDLINE | ID: mdl-23105107

ABSTRACT

The AAA-ATPase Vps4 is critical for function of the multivesicular body sorting pathway, which impacts cellular phenomena ranging from receptor down-regulation to viral budding to cytokinesis. Vps4 activity is stimulated by the interaction between Vta1 and Vps60, but the structural basis for this interaction is unclear. The fragment Vps60(128-186) was reported to display the full activity of Vps60. Vta1 interacts with Vps60 using its N-terminal domain (Vta1NTD). In this work, the structure of Vps60(128-186) in complex with Vta1NTD was determined using NMR techniques, demonstrating a novel recognition mode of the microtubule-interacting and transport (MIT) domain in which Vps60(128-186) interacts with Vta1NTD through helices α4' and α5', extending over Vta1NTD MIT2 domain helices 1-3. The Vps60 binding does not result in Vta1 conformational changes, further revealing the fact that Vps4 ATPase is enhanced by the interaction between Vta1 and Vps60 in an unanticipated manner.


Subject(s)
Endosomal Sorting Complexes Required for Transport/chemistry , Multiprotein Complexes/chemistry , Multivesicular Bodies/chemistry , Saccharomyces cerevisiae Proteins/chemistry , Saccharomyces cerevisiae/chemistry , Adenosine Triphosphatases/chemistry , Adenosine Triphosphatases/genetics , Adenosine Triphosphatases/metabolism , Endosomal Sorting Complexes Required for Transport/genetics , Endosomal Sorting Complexes Required for Transport/metabolism , Multiprotein Complexes/genetics , Multiprotein Complexes/metabolism , Multivesicular Bodies/genetics , Multivesicular Bodies/metabolism , Protein Structure, Quaternary , Protein Structure, Tertiary , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae Proteins/genetics , Saccharomyces cerevisiae Proteins/metabolism , Structure-Activity Relationship
12.
J Cell Sci ; 124(Pt 4): 613-21, 2011 Feb 15.
Article in English | MEDLINE | ID: mdl-21266469

ABSTRACT

Endosomal sorting complexes required for transport (ESCRTs) are heteromeric protein complexes required for multivesicular body (MVB) morphogenesis. ESCRTs I, II, III and III-associated are ubiquitous in eukaryotes and presumably ancient in origin. ESCRT 0 recruits cargo to the MVB and appears to be opisthokont-specific, bringing into question aspects of the current model of ESCRT mechanism. One caveat to the restricted distribution of ESCRT 0 was the previous limited availability of amoebozoan genomes, the supergroup closest to opisthokonts. Here, we significantly expand the sampling of ESCRTs in Amoebozoa. Our electron micrographic and bioinformatics evidence confirm the presence of MVBs in the amoeboflagellate Breviata anathema. Searches of genomic databases of amoebozoans confirm the ubiquitous nature of ESCRTs I-III-associated and the restriction of ESCRT 0 to opisthokonts. Recently, an alternate ESCRT 0 complex, centering on Tom1 proteins, has been proposed. We determine the distribution of Tom1 family proteins across eukaryotes and show that the Tom1, Tom1L1 and Tom1L2 proteins are a vertebrate-specific expansion of the single Tom1 family ancestor, which has indeed been identified in at least one member of each of the major eukaryotic supergroups. This implies a more widely conserved and ancient role for the Tom1 family in endocytosis than previously suspected.


Subject(s)
Amoeba/metabolism , Endosomal Sorting Complexes Required for Transport/metabolism , Evolution, Molecular , Multivesicular Bodies/metabolism , Protozoan Proteins/metabolism , Amoeba/classification , Amoeba/genetics , Endosomal Sorting Complexes Required for Transport/genetics , Molecular Sequence Data , Multivesicular Bodies/genetics , Phylogeny , Protein Transport , Protozoan Proteins/genetics
13.
J Cell Sci ; 124(Pt 21): 3537-44, 2011 Nov 01.
Article in English | MEDLINE | ID: mdl-22083140

ABSTRACT

The key read-out of Wnt signalling is a change in the transcriptional profile of the cell, which is driven by ß-catenin. ß-catenin levels are normally kept low by a phosphorylation event that is mediated by glycogen synthase kinase 3 (GSK3, α- and ß-isoforms), which targets ß-catenin for ubiquitylation and proteasomal degradation. Wnt blocks this phosphorylation event, thereby allowing ß-catenin to accumulate and to co-activate transcription in the nucleus. Exactly how Wnt inhibits GSK3 activity towards ß-catenin is unclear and has been the focus of intensive research. Recent studies on the role of conserved PPPSPxS motifs in the cytoplasmic tail of low-density lipoprotein receptor-related protein (LRP, isoforms 5 and 6) culminated in a biochemical model: Wnt induces the phosphorylation of LRP6 PPPSPxS motifs, which consequently access the catalytic pocket of GSK3 as pseudo-substrates, thus directly blocking its activity against ß-catenin. A distinct cell-biological model was proposed more recently: Wnt proteins induce the uptake of GSK3 into multivesicular bodies (MVBs), an event that sequesters the enzyme away from newly synthesised ß-catenin substrate in the cytoplasm, thus blocking its phosphorylation. This new model is based on intriguing observations but also challenges a body of existing evidence, so will require further experimental consolidation. We shall consider whether the two models apply to different modes of Wnt signaling: acute versus chronic.


Subject(s)
Down-Regulation , Glycogen Synthase Kinase 3/metabolism , Signal Transduction , Wnt Proteins/metabolism , beta Catenin/metabolism , Animals , Glycogen Synthase Kinase 3/antagonists & inhibitors , Glycogen Synthase Kinase 3/genetics , Humans , Low Density Lipoprotein Receptor-Related Protein-6/genetics , Low Density Lipoprotein Receptor-Related Protein-6/metabolism , Models, Biological , Multivesicular Bodies/genetics , Multivesicular Bodies/metabolism , Phosphorylation , Wnt Proteins/genetics , beta Catenin/genetics
14.
J Exp Bot ; 64(10): 2817-29, 2013 Jul.
Article in English | MEDLINE | ID: mdl-23682115

ABSTRACT

Arabidopsis thaliana ARA7 (AtRabF2b), a member of the plant Rab5 small GTPases functioning in the vacuolar transport pathway, localizes to pre-vacuolar compartments (PVCs), known as multivesicular bodies (MVBs) in plant cells. Overexpression of the constitutively active GTP-bound mutant of ARA7, ARA7(Q69L), induces the formation of large ring-like structures (1-2 µm in diameter). To better understand the biology of these ARA7(Q69L)-induced ring-like structures, transgenic Arabidopsis cell lines expressing ARA7(Q69L) tagged with green fluorescent protein (GFP) under the control of a heat shock-inducible promoter were generated. In these transgenic cells, robust ring-like structures were formed after 4 h of heat shock induction. Transient co-expression, confocal imaging, and immunogold electron microscopy (immunogold-EM) experiments demonstrated that these GFP-ARA7(Q69L)-labelled ring-like structures were distinct from the Golgi apparatus and trans-Golgi network, but were labelled with an antibody against an MVB marker protein. In addition, live cell imaging and detailed EM analysis showed that the GFP-ARA7(Q69L)-induced spherical structures originated from the homotypic fusion of MVBs. In summary, it was demonstrated that GFP-ARA7(Q69L) expression is an efficient tool for studying PVC/MVB-mediated protein trafficking and vacuolar degradation in plant cells.


Subject(s)
Arabidopsis Proteins/genetics , Arabidopsis Proteins/metabolism , Arabidopsis/enzymology , Multivesicular Bodies/enzymology , Mutation, Missense , rab GTP-Binding Proteins/genetics , rab GTP-Binding Proteins/metabolism , Arabidopsis/chemistry , Arabidopsis/genetics , Arabidopsis/metabolism , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Hot Temperature , Multivesicular Bodies/genetics , Plants, Genetically Modified/chemistry , Plants, Genetically Modified/enzymology , Plants, Genetically Modified/genetics , Plants, Genetically Modified/metabolism , Protein Transport , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism
15.
J Biol Chem ; 286(43): 37625-38, 2011 Oct 28.
Article in English | MEDLINE | ID: mdl-21896492

ABSTRACT

Multivesicular bodies (MVBs) are late endosomal compartments containing luminal vesicles (MVB vesicles) that are formed by inward budding of the endosomal membrane. In budding yeast, MVBs are an important cellular mechanism for the transport of membrane proteins to the vacuolar lumen. This process requires a class E subset of vacuolar protein sorting (VPS) genes. VPS44 (allelic to NHX1) encodes an endosome-localized Na(+)/H(+) exchanger. The function of the VPS44 exchanger in the context of vacuolar protein transport is largely unknown. Using a cell-free MVB formation assay system, we demonstrated that Nhx1p is required for the efficient formation of MVB vesicles in the late endosome. The recruitment of Vps27p, a class E Vps protein, to the endosomal membrane was dependent on Nhx1p activity and was enhanced by an acidic pH at the endosomal surface. Taken together, we propose that Nhx1p contributes to MVB formation by the recruitment of Vps27p to the endosomal membrane, possibly through Nhx1p antiporter activity.


Subject(s)
Endosomal Sorting Complexes Required for Transport/metabolism , Intracellular Membranes/metabolism , Multivesicular Bodies/metabolism , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/metabolism , Sodium-Hydrogen Exchangers/metabolism , Endosomal Sorting Complexes Required for Transport/genetics , Hydrogen-Ion Concentration , Multivesicular Bodies/genetics , Protein Transport , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/genetics , Sodium-Hydrogen Exchangers/genetics
16.
J Cell Biol ; 220(8)2021 08 02.
Article in English | MEDLINE | ID: mdl-34160559

ABSTRACT

Endosomal sorting complexes required for transport (ESCRT-0, -I, -II, -III) execute cargo sorting and intralumenal vesicle (ILV) formation during conversion of endosomes to multivesicular bodies (MVBs). The AAA-ATPase Vps4 regulates the ESCRT-III polymer to facilitate membrane remodeling and ILV scission during MVB biogenesis. Here, we show that the conserved V domain of ESCRT-associated protein Bro1 (the yeast homologue of mammalian proteins ALIX and HD-PTP) directly stimulates Vps4. This activity is required for MVB cargo sorting. Furthermore, the Bro1 V domain alone supports Vps4/ESCRT-driven ILV formation in vivo without efficient MVB cargo sorting. These results reveal a novel activity of the V domains of Bro1 homologues in licensing ESCRT-III-dependent ILV formation and suggest a role in coordinating cargo sorting with membrane remodeling during MVB sorting. Moreover, ubiquitin binding enhances V domain stimulation of Vps4 to promote ILV formation via the Bro1-Vps4-ESCRT-III axis, uncovering a novel role for ubiquitin during MVB biogenesis in addition to facilitating cargo recognition.


Subject(s)
Adenosine Triphosphatases/metabolism , Endosomal Sorting Complexes Required for Transport/metabolism , Multivesicular Bodies/enzymology , Organelle Biogenesis , Saccharomyces cerevisiae Proteins/metabolism , Saccharomyces cerevisiae/enzymology , Adenosine Triphosphatases/genetics , Binding Sites , Endosomal Sorting Complexes Required for Transport/genetics , Enzyme Activation , Microscopy, Fluorescence , Models, Molecular , Multivesicular Bodies/genetics , Mutation , Protein Domains , Protein Transport , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae Proteins/genetics , Ubiquitin/metabolism , Ubiquitination
17.
Autophagy ; 15(3): 527-542, 2019 03.
Article in English | MEDLINE | ID: mdl-30335568

ABSTRACT

50% of Caucasians carry a Thr300Ala variant (T300A) in the protein encoded by the macroautophagy/autophagy gene ATG16L1. Here, we show that the T300A variant confers protection against urinary tract infections (UTIs), the most common infectious disease in women. Using knockin mice carrying the human T300A variant, we show that the variant limits the UTI-causing bacteria, uropathogenic Escherichia coli (UPEC), from establishing persistent intracellular reservoirs, which can seed UTI recurrence. This phenotype is recapitulated in mice lacking Atg16l1 or Atg7 exclusively in the urothelium. We further show that mice with the T300A variant exhibit urothelial cellular abnormalities, including vesicular congestion and aberrant accumulation of UPK (uroplakin) proteins. Importantly, presence of the T300A variant in humans is associated with similar urothelial architectural abnormalities, indicating an evolutionarily conserved impact. Mechanistically, we show that the reduced bacterial persistence is independent of basal autophagic flux or proinflammatory cytokine responses and does not involve Atg14 or Epg5. However, the T300A variant is associated with increased expression of the small GTPase Rab33b; RAB33B interacts with ATG16L1, as well as other secretory RABs, RAB27B and RAB11A, important for UPEC exocytosis from the urothelium. Finally, inhibition of secretory RABs in bladder epithelial cells increases intracellular UPEC load. Together, our results reveal that UPEC selectively utilize genes important for autophagosome formation to persist in the urothelium, and that the presence of the T300A variant in ATG16L1 is associated with changes in urothelial vesicle trafficking, which disrupts the ability of UPEC to persist, thereby limiting the risk of recurrent UTIs. Abbreviations: 3-PEHPC: 3-pyridinyl ethylidene hydroxyl phosphonocarboxylate; ATG: autophagy; ATG16L1: autophagy related 16 like 1; BECs: bladder epithelial cells; dpi: days post infection; hpi: hours post infection; IF: immunofluorescence; IL1B: interleukin 1 beta; IL6: interleukin 6; MAP1LC3B/LC3B: microtubule-associated protein 1 light chain 3 beta; MVB: multivesicular bodies; T300A: Thr300Ala; TNF: tumor necrosis factor; QIR(s): quiescent intracellular reservoir(s); siRNA: short interfering RNA; UPEC: uropathogenic Escherichia coli; UTI(s): urinary tract infection(s); TEM: transmission electron microscopy; WT: wild type.


Subject(s)
Autophagy/genetics , Escherichia coli Infections/metabolism , Urinary Tract Infections/metabolism , Uropathogenic Escherichia coli , Urothelium/microbiology , Animals , Autophagy-Related Protein 7/genetics , Autophagy-Related Protein 7/metabolism , Autophagy-Related Proteins/genetics , Autophagy-Related Proteins/metabolism , Cell Line , Epithelial Cells/metabolism , Escherichia coli Infections/genetics , Escherichia coli Infections/microbiology , Escherichia coli Infections/pathology , Female , Genetic Variation , Humans , Macrophages/metabolism , Mice , Mice, Knockout , Multivesicular Bodies/genetics , Multivesicular Bodies/microbiology , Multivesicular Bodies/pathology , Urinary Bladder/microbiology , Urinary Tract Infections/genetics , Urinary Tract Infections/microbiology , Urinary Tract Infections/pathology , Uroplakins/metabolism , Urothelium/cytology , Urothelium/metabolism , Urothelium/ultrastructure , Vesicular Transport Proteins/genetics , Vesicular Transport Proteins/metabolism , rab GTP-Binding Proteins/metabolism
18.
Int J Biol Sci ; 14(6): 633-643, 2018.
Article in English | MEDLINE | ID: mdl-29904278

ABSTRACT

Saliva, which contains biological information, is considered a valuable diagnostic tool for local and systemic diseases and conditions because, similar to blood, it contains important molecules like DNA, RNA, and proteins. Exosomes are cell-derived vesicles 30-100 nm in diameter with substantial biological functions, including intracellular communication and signalling. These vesicles, which are present in bodily fluids, including saliva, are released upon fusion of multivesicular bodies (MVBs) with the cellular plasma membrane. Salivary diagnosis has notable advantages, which include noninvasiveness, ease of collection, absence of coagulation, and a similar content as plasma, as well as increased patient compliance compared to other diagnostic approaches. However, investigation of the roles of salivary exosomes is still in its early years. In this review, we first describe the characteristics of endocytosis and secretion of salivary exosomes, as well as database and bioinformatics analysis of exosomes. Then, we describe strategies for the isolation of exosomes from human saliva and the emerging role of salivary exosomes as potential biomarkers of oral and other systemic diseases. Given the ever-growing role of salivary exosomes, defining their functions and understanding their specific mechanisms will provide novel insights into possible applications of salivary exosomes in the diagnosis and treatment of systemic diseases.


Subject(s)
Biomarkers/metabolism , Exosomes/metabolism , Saliva/metabolism , Animals , Exosomes/genetics , Genomics , Humans , Multivesicular Bodies/genetics , Multivesicular Bodies/metabolism , Signal Transduction/genetics , Signal Transduction/physiology
19.
Cancer Lett ; 414: 107-115, 2018 02 01.
Article in English | MEDLINE | ID: mdl-29107112

ABSTRACT

Exosomes are a new means of intercellular information exchange that have aroused great research interest. Long neglected in research, exosomes were deemed nonfunctional cellular components to be discarded. However, it has been gradually revealed that exosomes are an important tool for the exchange of intercellular information and material. Exosomes contain specific repertoires of non-coding RNAs (ncRNAs, including microRNA and lncRNA), indicating that a specific RNA sorting mechanism may exist. Correspondingly, intracellular multivesicular bodies (MVBs) are produced after fusion with the cell membrane to release exosomes rather than inducing autophagy, which reveals that there may be a specific regulatory mechanism for MVB secretion. Cells can trigger cancer-related disorders after the recognition and uptake of circulating exosomal ncRNAs, providing indications for early tumor biopsy and treatment. The use of exosomes as a biological carrier in targeted therapy has been demonstrated. However, there may be a specific, unknown switch for loading drugs. This review focuses on the mechanisms of exosome biogenesis, release, and uptake. We also review the promotion of tumor development by exosomal ncRNAs including chemotherapy resistance, metastasis and the prospective use of exosomes in cancer diagnosis and treatment.


Subject(s)
Exosomes/genetics , MicroRNAs/genetics , Neoplasms/genetics , RNA, Long Noncoding/genetics , Animals , Biological Transport , Cell Communication , Cell Membrane/genetics , Cell Membrane/metabolism , Humans , MicroRNAs/metabolism , Multivesicular Bodies/genetics , Multivesicular Bodies/metabolism , Neoplasms/metabolism , Neoplasms/therapy , RNA, Long Noncoding/metabolism
20.
Cell Death Differ ; 23(1): 99-109, 2016 Jan.
Article in English | MEDLINE | ID: mdl-26045048

ABSTRACT

Multivesicular bodies (MVBs) are endocytic compartments that enclose intraluminal vesicles (ILVs) formed by inward budding from the limiting membrane of endosomes. In T lymphocytes, these ILV contain Fas ligand (FasL) and are secreted as 'lethal exosomes' following activation-induced fusion of the MVB with the plasma membrane. Diacylglycerol (DAG) and diacylglycerol kinase α (DGKα) regulate MVB maturation and polarized traffic, as well as subsequent secretion of pro-apoptotic exosomes, but the molecular basis underlying these phenomena remains unclear. Here we identify protein kinase D (PKD) family members as DAG effectors involved in MVB genesis and secretion. We show that the inducible secretion of exosomes is enhanced when a constitutively active PKD1 mutant is expressed in T lymphocytes, whereas exosome secretion is impaired in PKD2-deficient mouse T lymphoblasts and in PKD1/3-null B cells. Analysis of PKD2-deficient T lymphoblasts showed the presence of large, immature MVB-like vesicles and demonstrated defects in cytotoxic activity and in activation-induced cell death. Using pharmacological and genetic tools, we show that DGKα regulates PKD1/2 subcellular localization and activation. Our studies demonstrate that PKD1/2 is a key regulator of MVB maturation and exosome secretion, and constitutes a mediator of the DGKα effect on MVB secretory traffic.


Subject(s)
Cell Death/genetics , Diacylglycerol Kinase/genetics , Protein Kinase C/genetics , Protein Kinases/genetics , Animals , B-Lymphocytes/metabolism , Diacylglycerol Kinase/metabolism , Exosomes/genetics , Exosomes/metabolism , Fas Ligand Protein , Mice , Multivesicular Bodies/genetics , Multivesicular Bodies/metabolism , Protein Kinase C/metabolism , Protein Kinase D2 , Protein Kinases/metabolism , T-Lymphocytes/metabolism
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